Your job contains 1 sequence.
>psy17688
MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE
DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN
KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD
KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW
DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17688
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5ZIT1 - symbol:DCAF7 "Uncharacterized protein"... 1595 7.1e-164 1
UNIPROTKB|Q32L87 - symbol:WDR68 "WD repeat domain 68" spe... 1595 7.1e-164 1
UNIPROTKB|E2REP1 - symbol:DCAF7 "Uncharacterized protein"... 1595 7.1e-164 1
UNIPROTKB|P61962 - symbol:DCAF7 "DDB1- and CUL4-associate... 1595 7.1e-164 1
UNIPROTKB|F2Z564 - symbol:DCAF7 "Uncharacterized protein"... 1595 7.1e-164 1
MGI|MGI:1919083 - symbol:Dcaf7 "DDB1 and CUL4 associated ... 1595 7.1e-164 1
ZFIN|ZDB-GENE-030131-9511 - symbol:dcaf7 "ddb1 and cul4 a... 1595 7.1e-164 1
DICTYBASE|DDB_G0275925 - symbol:wdr68 "WD40 repeat-contai... 1071 2.4e-108 1
TAIR|locus:2010356 - symbol:ATAN11 "AT1G12910" species:37... 1020 6.0e-103 1
TAIR|locus:2090792 - symbol:LWD2 "AT3G26640" species:3702... 991 7.1e-100 1
WB|WBGene00009977 - symbol:swan-1 species:6239 "Caenorhab... 949 2.0e-95 1
UNIPROTKB|Q93758 - symbol:swan-1 "Protein SWAN-1" species... 949 2.0e-95 1
TAIR|locus:2153914 - symbol:TTG1 "AT5G24520" species:3702... 874 1.8e-87 1
POMBASE|SPBC17D11.08 - symbol:SPBC17D11.08 "WD repeat pro... 487 2.0e-51 2
UNIPROTKB|B4E039 - symbol:DCAF7 "DDB1- and CUL4-associate... 480 1.0e-45 1
UNIPROTKB|G4MXS3 - symbol:MGG_08065 "WD domain-containing... 385 7.6e-44 2
CGD|CAL0004918 - symbol:orf19.384 species:5476 "Candida a... 270 7.1e-43 3
UNIPROTKB|Q59QD4 - symbol:CaO19.384 "Putative uncharacter... 270 7.1e-43 3
ASPGD|ASPL0000042232 - symbol:AN1695 species:162425 "Emer... 360 3.6e-39 2
SGD|S000006168 - symbol:YPL247C "Putative protein of unkn... 298 6.1e-32 2
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 142 7.4e-07 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 139 8.4e-07 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 141 1.4e-06 2
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 141 1.4e-06 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 138 2.0e-06 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 138 2.0e-06 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 138 2.0e-06 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 138 2.2e-06 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 136 3.7e-06 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 135 3.8e-06 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 136 3.8e-06 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 135 4.4e-06 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 135 4.4e-06 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 135 4.4e-06 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 135 4.4e-06 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 135 4.4e-06 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 135 4.4e-06 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 135 4.4e-06 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 135 4.4e-06 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 133 7.0e-06 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 133 9.8e-06 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 130 9.9e-06 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 129 1.2e-05 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 131 1.3e-05 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 131 1.5e-05 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 125 1.5e-05 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 128 2.7e-05 1
MGI|MGI:2442115 - symbol:Wdr59 "WD repeat domain 59" spec... 131 4.0e-05 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 128 5.6e-05 2
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 124 7.1e-05 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 127 7.2e-05 2
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 124 7.4e-05 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 124 7.5e-05 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 126 9.4e-05 2
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 122 0.00011 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 122 0.00012 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 122 0.00012 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 122 0.00012 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 122 0.00012 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 122 0.00012 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 122 0.00012 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 122 0.00012 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 122 0.00012 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 122 0.00014 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 122 0.00014 1
UNIPROTKB|C9J4Z7 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9J6C8 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9JBJ7 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9JEY1 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9JFG9 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9JQM8 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9JTT6 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|C9K057 - symbol:ARPC1B "Actin-related protein 2... 99 0.00015 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 124 0.00016 2
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 121 0.00016 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 121 0.00017 1
UNIPROTKB|Q6PJI9 - symbol:WDR59 "WD repeat-containing pro... 124 0.00023 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 117 0.00025 2
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 118 0.00036 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 118 0.00038 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 118 0.00039 1
POMBASE|SPBC8D2.20c - symbol:sec31 "COPII-coated vesicle ... 123 0.00039 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 117 0.00043 1
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 123 0.00044 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 117 0.00048 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 117 0.00058 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 115 0.00079 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 90 0.00081 2
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 120 0.00086 1
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 120 0.00087 1
>UNIPROTKB|Q5ZIT1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:AADN02056761 EMBL:AADN02056762 EMBL:AADN02056763 EMBL:AJ720703
IPI:IPI00594361 RefSeq:NP_001072972.1 UniGene:Gga.13087 SMR:Q5ZIT1
STRING:Q5ZIT1 Ensembl:ENSGALT00000000697 GeneID:771554
KEGG:gga:771554 InParanoid:Q5ZIT1 NextBio:20921754 Uniprot:Q5ZIT1
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|Q32L87 [details] [associations]
symbol:WDR68 "WD repeat domain 68" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:DAAA02049321 EMBL:BC109703 IPI:IPI00689532
RefSeq:NP_001033214.1 UniGene:Bt.31136 SMR:Q32L87 STRING:Q32L87
Ensembl:ENSBTAT00000004550 GeneID:516678 KEGG:bta:516678
InParanoid:Q32L87 NextBio:20872286 Uniprot:Q32L87
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|E2REP1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
KO:K11805 GeneTree:ENSGT00390000006939 EMBL:AAEX03006356
RefSeq:XP_003639298.1 ProteinModelPortal:E2REP1 SMR:E2REP1
PRIDE:E2REP1 Ensembl:ENSCAFT00000020578 GeneID:100856670
KEGG:cfa:100856670 NextBio:20898417 Uniprot:E2REP1
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|P61962 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 EMBL:CH471109 GO:GO:0080008
eggNOG:NOG314410 OMA:NKVQIVS EMBL:U94747 EMBL:BC001264
IPI:IPI00006754 RefSeq:NP_005819.3 UniGene:Hs.410596
ProteinModelPortal:P61962 SMR:P61962 DIP:DIP-40363N IntAct:P61962
MINT:MINT-1141032 STRING:P61962 PhosphoSite:P61962 DMDM:48428729
PaxDb:P61962 PRIDE:P61962 DNASU:10238 Ensembl:ENST00000310827
GeneID:10238 KEGG:hsa:10238 UCSC:uc002jbc.3 CTD:10238
GeneCards:GC17P061627 HGNC:HGNC:30915 HPA:HPA022948 HPA:HPA022962
MIM:605973 neXtProt:NX_P61962 PharmGKB:PA165431770
HOGENOM:HOG000260968 HOVERGEN:HBG050497 InParanoid:P61962 KO:K11805
OrthoDB:EOG40P46Z GenomeRNAi:10238 NextBio:38784
ArrayExpress:P61962 Bgee:P61962 CleanEx:HS_WDR68
Genevestigator:P61962 GermOnline:ENSG00000136485 Uniprot:P61962
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|F2Z564 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
CTD:10238 KO:K11805 GeneTree:ENSGT00390000006939 EMBL:CU929939
RefSeq:XP_003131342.1 UniGene:Ssc.95972 ProteinModelPortal:F2Z564
SMR:F2Z564 PRIDE:F2Z564 Ensembl:ENSSSCT00000018826 GeneID:100514182
KEGG:ssc:100514182 Uniprot:F2Z564
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>MGI|MGI:1919083 [details] [associations]
symbol:Dcaf7 "DDB1 and CUL4 associated factor 7"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919083
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0080008 eggNOG:NOG314410 OMA:NKVQIVS CTD:10238
HOGENOM:HOG000260968 HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
EMBL:AK005902 EMBL:AK047435 EMBL:AK165674 EMBL:BC048722
IPI:IPI00262605 RefSeq:NP_082222.1 UniGene:Mm.307455
ProteinModelPortal:P61963 SMR:P61963 STRING:P61963
PhosphoSite:P61963 REPRODUCTION-2DPAGE:P61963 PaxDb:P61963
PRIDE:P61963 Ensembl:ENSMUST00000058438 GeneID:71833 KEGG:mmu:71833
GeneTree:ENSGT00390000006939 InParanoid:P61963 ChiTaRS:DCAF7
NextBio:334652 Bgee:P61963 CleanEx:MM_WDR68 Genevestigator:P61963
GermOnline:ENSMUSG00000049354 Uniprot:P61963
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 290/337 (86%), Positives = 311/337 (92%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>ZFIN|ZDB-GENE-030131-9511 [details] [associations]
symbol:dcaf7 "ddb1 and cul4 associated factor 7"
species:7955 "Danio rerio" [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-9511 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0051216
eggNOG:NOG314410 OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968
HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
GeneTree:ENSGT00390000006939 EMBL:CU062431 EMBL:BC053157
IPI:IPI00507194 RefSeq:NP_956363.1 UniGene:Dr.79208 STRING:Q7T3E0
Ensembl:ENSDART00000058221 GeneID:337565 KEGG:dre:337565
InParanoid:Q7T3E0 NextBio:20812303 Uniprot:Q7T3E0
Length = 342
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 289/337 (85%), Positives = 310/337 (91%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L E+ SEF ++T D
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFVCRNTFD 66
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
HPYPTTKIMWIPD KGV+PDLLATSGDYLR+WR + ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67 HPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVNDTETRLECLLNNNKNSDFCAPLTSF 126
Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
DWNEVDPNLLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+ E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306
Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
ILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342
>DICTYBASE|DDB_G0275925 [details] [associations]
symbol:wdr68 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0275925 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 RefSeq:XP_643620.2 ProteinModelPortal:Q552R1
EnsemblProtists:DDB0267164 GeneID:8620207 KEGG:ddi:DDB_G0275925
eggNOG:NOG314410 OMA:NKVQIVS ProtClustDB:CLSZ2735624 Uniprot:Q552R1
Length = 325
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 198/339 (58%), Positives = 251/339 (74%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+K IY Y +PW +Y ++WS R ++ FRLAIGS++E+Y N+V ++ LNE+ +F +
Sbjct: 3 KKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVVCGFE 62
Query: 73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPET--RLECILNNNKNSDFCAPLT 130
HPYP TK MWIPD+ PDLLAT+GDYLR+W G + +L+ +L N S+FCAPL+
Sbjct: 63 HPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPLS 121
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
SFDWNE DP+LL TSSIDTTCTIW +ET G KTQLIAHDKEV+DIAF+R
Sbjct: 122 SFDWNETDPSLLATSSIDTTCTIWNIET-----------GQAKTQLIAHDKEVFDIAFAR 170
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250
G D+FASVGA+GS+RMFDLR+LEHSTIIYE P PLLRL WNKQDPNYLA + ++
Sbjct: 171 ---GTDLFASVGADGSLRMFDLRNLEHSTIIYETPSFVPLLRLCWNKQDPNYLATIQQDS 227
Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE 310
+VIILD+RVP P A L H++ VNGI+WAPHSSCHICT DD QALIWD+ MP+ IE
Sbjct: 228 PKVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE 287
Query: 311 DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
DP+L Y A EINQ+ W ++QPDWIAI ++ +L++L+V
Sbjct: 288 DPLLTYNALA-EINQLSWSSSQPDWIAIAFSSHLQILKV 325
>TAIR|locus:2010356 [details] [associations]
symbol:ATAN11 "AT1G12910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=NAS] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009718 GO:GO:0048511 GO:GO:0044212
EMBL:AC012187 GO:GO:0048573 GO:GO:0043153 eggNOG:NOG314410
OMA:NKVQIVS HOGENOM:HOG000260968 KO:K11805 UniGene:At.23958
EMBL:U94746 EMBL:AY093101 EMBL:AY128776 EMBL:AY087676
IPI:IPI00520024 PIR:G86262 RefSeq:NP_172751.1 UniGene:At.62609
ProteinModelPortal:Q9LPV9 SMR:Q9LPV9 STRING:Q9LPV9 PaxDb:Q9LPV9
PRIDE:Q9LPV9 EnsemblPlants:AT1G12910.1 GeneID:837849
KEGG:ath:AT1G12910 GeneFarm:2811 TAIR:At1g12910 InParanoid:Q9LPV9
PhylomeDB:Q9LPV9 ProtClustDB:CLSN2682478 Genevestigator:Q9LPV9
Uniprot:Q9LPV9
Length = 346
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 198/345 (57%), Positives = 249/345 (72%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKST 70
+ EIY YEAPW +Y+MNWSVR DK +RLAI S +E+Y N+V+IV L+E E P +
Sbjct: 18 RSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLS 77
Query: 71 IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLEC--ILNNNKNSDFCAP 128
+HPYP TK ++IPD++ PDLLATS D+LR+WR + +R+E LN+NKNS+FC P
Sbjct: 78 FEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGP 137
Query: 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
LTSFDWNE +P +GTSS DTTCTIW +E V TQLIAHDKEV+DIA+
Sbjct: 138 LTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAV-----------DTQLIAHDKEVFDIAW 186
Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVA 247
GG +FASV A+GSVR+FDLR EHSTIIYE + TPL+RL WNKQDP Y+A +
Sbjct: 187 ----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
M++ +V++LD+R P PV L H+A VN IAWAPHSSCHICTAGDD QALIWDI M +
Sbjct: 243 MDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQ 302
Query: 308 AIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
+E DPILAYTA G EI Q+QW ++QPDW+AI ++ L++LRV
Sbjct: 303 HVEGGLDPILAYTA-GAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 193/345 (55%), Positives = 248/345 (71%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKST 70
+ EIY YEAPW +Y+MNWS+R DK +RLAI S +E+Y N+V+IV L+E E P
Sbjct: 18 RSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLC 77
Query: 71 IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLEC--ILNNNKNSDFCAP 128
+HPYP TK +IPD++ PDLLATS D+LR+WR + E+R+E L+++KNS+F P
Sbjct: 78 FEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGP 137
Query: 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
+TSFDWNE +P +GTSSIDTTCTIW +E +VV TQLIAHDKEVYDIA+
Sbjct: 138 ITSFDWNEAEPRRIGTSSIDTTCTIWDIE-REVVD----------TQLIAHDKEVYDIAW 186
Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVA 247
GG +FASV +GSVR+FDLR EHSTIIYE + TPL+RL+WNKQDP Y+A V
Sbjct: 187 ----GGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVI 242
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
M + ++++LD+R P PV L H+A VN IAWAPHSS HIC+AGDD QALIWDI M +
Sbjct: 243 MGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQ 302
Query: 308 AIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
+E DPILAYTA G E+ Q+QW ++QPDW+AI ++ L++LRV
Sbjct: 303 HVEGGLDPILAYTA-GAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
>WB|WBGene00009977 [details] [associations]
symbol:swan-1 species:6239 "Caenorhabditis elegans"
[GO:0032314 "regulation of Rac GTPase activity" evidence=IPI]
[GO:0060101 "negative regulation of phagocytosis, engulfment"
evidence=IGI] [GO:0030336 "negative regulation of cell migration"
evidence=IGI] [GO:0030516 "regulation of axon extension"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030336 GO:GO:0030516 GO:GO:0032314
eggNOG:NOG314410 HOGENOM:HOG000260968 GeneTree:ENSGT00390000006939
EMBL:Z79756 GO:GO:0060101 PIR:T22553 RefSeq:NP_506418.1
ProteinModelPortal:Q93758 SMR:Q93758 DIP:DIP-24751N IntAct:Q93758
MINT:MINT-1099991 STRING:Q93758 PaxDb:Q93758
EnsemblMetazoa:F53C11.8.1 EnsemblMetazoa:F53C11.8.2 GeneID:179876
KEGG:cel:CELE_F53C11.8 UCSC:F53C11.8.1 CTD:179876 WormBase:F53C11.8
InParanoid:Q93758 OMA:QILDIRM NextBio:907230 Uniprot:Q93758
Length = 388
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 179/341 (52%), Positives = 238/341 (69%)
Query: 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE-EYN----NKVQIVALNEDISEFGPKS 69
EIYK+ + LY+ WS + D FRLA+G+ + N NKV IV L ++ E +
Sbjct: 49 EIYKFTSDQQLYASAWSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETA 108
Query: 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPL 129
+ +P + +IPD V+PDL+AT+ D LR+WR + + + ++ NN NS + + L
Sbjct: 109 SFPMEFPANAVGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGSAL 168
Query: 130 TSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH-VKTQLIAHDKEVYDIAF 188
TSFDWNE++P +G SS+DTTCTI+ +E +G+ + +KTQLIAHDK V+DI F
Sbjct: 169 TSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLIAHDKPVHDIEF 228
Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248
++ GGRD FA+VGA+GS RMFDLRHL HSTI+YEDP L RL+WNKQ+P ++A+ A
Sbjct: 229 AKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPNKEKLQRLSWNKQEPYFMALFAE 288
Query: 249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308
N+ EV ILD+R+PC + RL NH VNGIAWAPHS HICTAGDD QALIWD+QQ+PR
Sbjct: 289 NSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSPHHICTAGDDSQALIWDLQQVPRP 348
Query: 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
++DPILAY+A GGE+NQI WG +WIAIC+NK LE+LRV
Sbjct: 349 VDDPILAYSA-GGEVNQIHWGPVHSNWIAICFNKTLEILRV 388
>UNIPROTKB|Q93758 [details] [associations]
symbol:swan-1 "Protein SWAN-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030336 GO:GO:0030516 GO:GO:0032314
eggNOG:NOG314410 HOGENOM:HOG000260968 GeneTree:ENSGT00390000006939
EMBL:Z79756 GO:GO:0060101 PIR:T22553 RefSeq:NP_506418.1
ProteinModelPortal:Q93758 SMR:Q93758 DIP:DIP-24751N IntAct:Q93758
MINT:MINT-1099991 STRING:Q93758 PaxDb:Q93758
EnsemblMetazoa:F53C11.8.1 EnsemblMetazoa:F53C11.8.2 GeneID:179876
KEGG:cel:CELE_F53C11.8 UCSC:F53C11.8.1 CTD:179876 WormBase:F53C11.8
InParanoid:Q93758 OMA:QILDIRM NextBio:907230 Uniprot:Q93758
Length = 388
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 179/341 (52%), Positives = 238/341 (69%)
Query: 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE-EYN----NKVQIVALNEDISEFGPKS 69
EIYK+ + LY+ WS + D FRLA+G+ + N NKV IV L ++ E +
Sbjct: 49 EIYKFTSDQQLYASAWSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETA 108
Query: 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPL 129
+ +P + +IPD V+PDL+AT+ D LR+WR + + + ++ NN NS + + L
Sbjct: 109 SFPMEFPANAVGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGSAL 168
Query: 130 TSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH-VKTQLIAHDKEVYDIAF 188
TSFDWNE++P +G SS+DTTCTI+ +E +G+ + +KTQLIAHDK V+DI F
Sbjct: 169 TSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLIAHDKPVHDIEF 228
Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248
++ GGRD FA+VGA+GS RMFDLRHL HSTI+YEDP L RL+WNKQ+P ++A+ A
Sbjct: 229 AKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPNKEKLQRLSWNKQEPYFMALFAE 288
Query: 249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308
N+ EV ILD+R+PC + RL NH VNGIAWAPHS HICTAGDD QALIWD+QQ+PR
Sbjct: 289 NSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSPHHICTAGDDSQALIWDLQQVPRP 348
Query: 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
++DPILAY+A GGE+NQI WG +WIAIC+NK LE+LRV
Sbjct: 349 VDDPILAYSA-GGEVNQIHWGPVHSNWIAICFNKTLEILRV 388
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 179/341 (52%), Positives = 238/341 (69%)
Query: 19 YEAPWPLYSMNWS-VRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPY 75
Y++P+PLY+M +S +R R+A+GS++E+YNN++ I++ + D P + +HPY
Sbjct: 18 YDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPY 77
Query: 76 PTTKIMWIPD--RKGVFPDLLATSGDYLRVWRAGEPETRLE--CILNNNKNSDFCAPLTS 131
P TK+M+ P R+ DLLA+SGD+LR+W E + +E +LNN+K S+FCAPLTS
Sbjct: 78 PPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTS 137
Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
FDWN+V+P LGT SIDTTCTIW +E SV V+TQLIAHDKEV+DIA+ A
Sbjct: 138 FDWNDVEPKRLGTCSIDTTCTIWDIE--------KSV---VETQLIAHDKEVHDIAWGEA 186
Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVAMNA 250
+FASV A+GSVR+FDLR EHSTIIYE PQ TPLLRLAWNKQD Y+A + M++
Sbjct: 187 R----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 242
Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRA 308
+V+ILD+R P PVA L H+A VN IAWAP S HIC+ GDD QALIW++ + P
Sbjct: 243 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNG 302
Query: 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
I DP+ Y+A G EINQ+QW ++QPDWI I + +++LRV
Sbjct: 303 I-DPMSVYSA-GSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
>POMBASE|SPBC17D11.08 [details] [associations]
symbol:SPBC17D11.08 "WD repeat protein, DDB1 and
CUL4-associated factor 7 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC17D11.08 GO:GO:0005829
GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 EMBL:CU329671 GO:GO:0016567
GO:GO:0080008 eggNOG:NOG314410 HOGENOM:HOG000260968 KO:K11805
PIR:T39719 RefSeq:NP_596382.1 ProteinModelPortal:O74763
STRING:O74763 EnsemblFungi:SPBC17D11.08.1 GeneID:2539614
KEGG:spo:SPBC17D11.08 OMA:RFCSPLT OrthoDB:EOG48PQTZ
NextBio:20800771 Uniprot:O74763
Length = 435
Score = 487 (176.5 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 127/331 (38%), Positives = 176/331 (53%)
Query: 14 KEIYKYEAPWPLYSMNWSVRPDKLFR--LAIGSYVEEYNNKVQIVAL--NEDISEFGPKS 69
KE Y APW ++++W ++ K +A+GS EE NN +Q++ L +D + K+
Sbjct: 42 KEYTGYNAPWIPFALDW-LKQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEKA 100
Query: 70 --TIDHPYPTTKIMWIPDRKGVFPD--LLATSGDYLRVWR----AGEPETRL-ECILNNN 120
D YP TK++W P G D LLA++ LR+W+ AG L + L+ +
Sbjct: 101 QAATDLEYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTH 160
Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
+ APLTSFDW + DP+ + SS+DTTCT+W + Q KTQLIAHD
Sbjct: 161 VKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQS-----------KTQLIAHD 209
Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED---------------- 224
KEVYD+AF + ++F SVGA+GSVRMFDLR L+HSTIIYE
Sbjct: 210 KEVYDVAFLK--DSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASP 267
Query: 225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 284
P PLLRL+ D N +A N+ +V ++D+RVP T A L H+ VN + W P S
Sbjct: 268 PVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGS 327
Query: 285 SCHICTAGDDHQALIWDIQQMPRAIEDPILA 315
+ T GDD +WD+ Q P L+
Sbjct: 328 KSKLATCGDDCVVSLWDLDQPVNPSPAPTLS 358
Score = 64 (27.6 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
P+L++ E+N + W + + D +A+ Y K LE+L+V
Sbjct: 398 PLLSWKLEH-EVNNLSW-SVKNDGLAVVYGKSLEILKV 433
>UNIPROTKB|B4E039 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AC113554
UniGene:Hs.410596 HGNC:HGNC:30915 EMBL:AK303212 IPI:IPI00908632
SMR:B4E039 STRING:B4E039 Ensembl:ENST00000415273 UCSC:uc010wpn.2
HOGENOM:HOG000200527 Uniprot:B4E039
Length = 142
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED 311
+V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIED
Sbjct: 46 KVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIED 105
Query: 312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
PILAYTA G EIN +QW +TQPDWIAICYN LE+LRV
Sbjct: 106 PILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 142
Score = 200 (75.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
+KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKV I+ + + P + ++
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVVILDVRVPCT---PVARLN 63
Query: 73 -HPYPTTKIMWIP 84
H I W P
Sbjct: 64 NHRACVNGIAWAP 76
>UNIPROTKB|G4MXS3 [details] [associations]
symbol:MGG_08065 "WD domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K11805 RefSeq:XP_003715017.1
ProteinModelPortal:G4MXS3 EnsemblFungi:MGG_08065T0 GeneID:2678269
KEGG:mgr:MGG_08065 Uniprot:G4MXS3
Length = 454
Score = 385 (140.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 103/232 (44%), Positives = 127/232 (54%)
Query: 97 SGDYLRVWRAGEPETRLE--CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW 154
S + R R P T+L +L+N+K D APLTS DWN+V NL+ TSSIDTTCTIW
Sbjct: 175 SNNINRSSRDPAPPTKLTPLALLSNSKTPDHTAPLTSLDWNQVSQNLIITSSIDTTCTIW 234
Query: 155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH 214
+ S++ KTQLIAHDKEVYD+ F D+F S G +GSVRMFDLR
Sbjct: 235 ---------DIPSLTA--KTQLIAHDKEVYDVRF--CANSVDVFVSCGQDGSVRMFDLRS 281
Query: 215 LEHSTIIYE-------DP----------QHT-----PLLRLAWNKQDPNYLAMVAMNACE 252
LEHSTIIYE DP Q T PLLRLA + D + LA A ++
Sbjct: 282 LEHSTIIYEPTGKDEKDPSGGRISPTLAQQTMSNPPPLLRLATSPHDTHLLATFAQDSNV 341
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304
+ ILDVR P + L H +N I W+P + + DD Q LIWD+ Q
Sbjct: 342 IRILDVRQPGQALLELRGHGGSLNCIEWSPLRRGTLASGADDCQVLIWDLLQ 393
Score = 250 (93.1 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 75/179 (41%), Positives = 96/179 (53%)
Query: 64 EFGPKSTIDHPYPTTKIMW---IPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNN- 119
EF + H YP T+++W P+ + DLLATSGD+LR+W P + NN
Sbjct: 121 EFTKVAEATHSYPVTRLLWEPHSPNSQKQSTDLLATSGDHLRLWSL--PSDASSSMSNNI 178
Query: 120 NKNSDFCAPLTSFDWNEVDP-NLLGTSSI-DTTCTIWCLETNQVVGRV---NSV------ 168
N++S AP T ++ P LL S D T + L+ NQV + +S+
Sbjct: 179 NRSSRDPAPPT-----KLTPLALLSNSKTPDHTAPLTSLDWNQVSQNLIITSSIDTTCTI 233
Query: 169 ----SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223
S KTQLIAHDKEVYD+ F D+F S G +GSVRMFDLR LEHSTIIYE
Sbjct: 234 WDIPSLTAKTQLIAHDKEVYDVRF--CANSVDVFVSCGQDGSVRMFDLRSLEHSTIIYE 290
Score = 94 (38.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 3 GHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDK---LFRLAIGSYVEEYNNKVQIV 56
G A+ TQ Y APW LY+ +W P + +LAIGSY+E+ +N +QI+
Sbjct: 43 GSAAYDVANTQSGTSNYMAPWALYAFDWCKYPPQGNGAGKLAIGSYLEDGHNFIQIL 99
Score = 56 (24.8 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 278 IAWAPHSSCHICTAGDDHQAL-IWDIQQMPRAIEDPILAYTAAGGEINQIQW 328
+A +PH + + T D + I D++Q +A+ L GG +N I+W
Sbjct: 322 LATSPHDTHLLATFAQDSNVIRILDVRQPGQAL----LELRGHGGSLNCIEW 369
>CGD|CAL0004918 [details] [associations]
symbol:orf19.384 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004918 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AACQ01000177 EMBL:AACQ01000176 eggNOG:NOG314410 KO:K11805
RefSeq:XP_711872.1 RefSeq:XP_711901.1 ProteinModelPortal:Q59QD4
STRING:Q59QD4 GeneID:3646465 GeneID:3646504 KEGG:cal:CaO19.384
KEGG:cal:CaO19.8014 Uniprot:Q59QD4
Length = 558
Score = 270 (100.1 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 55/99 (55%), Positives = 70/99 (70%)
Query: 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV---SGHVKTQLIAHDKEVY 184
P+TSFDWN+ DPN+L TSS+DTTC +W L + +N + VKTQLIAHD EV+
Sbjct: 293 PVTSFDWNKTDPNVLITSSVDTTCIVWDLHRSPGRTAINEEMLDTATVKTQLIAHDSEVF 352
Query: 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223
D+ F ++FASVG +GS+R+FDLR LEHSTIIYE
Sbjct: 353 DVKFLHKS--TNVFASVGNDGSMRVFDLRSLEHSTIIYE 389
Score = 142 (55.0 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV----ARLNN-HRACVNGIAWAPHS 284
LL L+ + D ++LA V +N+ ++II+D+R+P PV A L + + +N I W P S
Sbjct: 422 LLTLSTSNVDQHHLAAVGVNSNQIIIIDMRMPGLPVVIIDASLGGMNNSSINSIKWHPTS 481
Query: 285 SCHICTAGDDHQALIWDIQQMPRA 308
+ ++ + GDD QAL+WDI + A
Sbjct: 482 N-YLLSGGDDCQALVWDINNLSNA 504
Score = 119 (46.9 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
M V+I+D + +NN + +N I W P S+ ++ + GDD QAL+WDI +
Sbjct: 452 MPGLPVVIIDASL-----GGMNN--SSINSIKWHPTSN-YLLSGGDDCQALVWDINNLSN 503
Query: 308 A--------------IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
A I+ P+LAY+ EIN + W Q DW+ + K + + +
Sbjct: 504 ATNGSTNGSNHSGRIIDTPVLAYSE-DLEINNVCWRQNQGDWMGVVSGKGFQAVSI 558
Score = 90 (36.7 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 19/65 (29%), Positives = 40/65 (61%)
Query: 8 VPPTTQKEIYKYEAPWPLYSMNWS-VRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFG 66
+PPT + Y + +PLY+ +W+ + ++ +A+GSY E + NK++IV + +EF
Sbjct: 101 IPPTPLERNSYYFSEFPLYACDWTCLNNGQMDCIAVGSYKETFANKLEIVHGSNYENEFN 160
Query: 67 PKSTI 71
++++
Sbjct: 161 MENSL 165
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 37/136 (27%), Positives = 56/136 (41%)
Query: 26 YSMNWSVRP--DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI 83
++M S+ P D F + Y +I + +E F + YP T + W
Sbjct: 159 FNMENSLSPGTDNSFNYNNKNNTNAYYEDEEIASRDEGFC-FQKVCDVTLDYPITHLQWD 217
Query: 84 PDR-----KGVFPDLLATSGDYLRVWRA---GEPETRLEC--ILNNNKNSDFCAPLTSFD 133
P GV + LATS + LR+++ G L+ +L NN S C+ TS +
Sbjct: 218 PSMLSYGSSGV--ERLATSSEVLRLYKVANNGNDSYSLQQTHVLANNTAS--CSS-TSSN 272
Query: 134 WNEVDPNLLGTSSIDT 149
N N G+SS T
Sbjct: 273 SN----NSSGSSSART 284
>UNIPROTKB|Q59QD4 [details] [associations]
symbol:CaO19.384 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004918 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AACQ01000177
EMBL:AACQ01000176 eggNOG:NOG314410 KO:K11805 RefSeq:XP_711872.1
RefSeq:XP_711901.1 ProteinModelPortal:Q59QD4 STRING:Q59QD4
GeneID:3646465 GeneID:3646504 KEGG:cal:CaO19.384
KEGG:cal:CaO19.8014 Uniprot:Q59QD4
Length = 558
Score = 270 (100.1 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 55/99 (55%), Positives = 70/99 (70%)
Query: 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV---SGHVKTQLIAHDKEVY 184
P+TSFDWN+ DPN+L TSS+DTTC +W L + +N + VKTQLIAHD EV+
Sbjct: 293 PVTSFDWNKTDPNVLITSSVDTTCIVWDLHRSPGRTAINEEMLDTATVKTQLIAHDSEVF 352
Query: 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223
D+ F ++FASVG +GS+R+FDLR LEHSTIIYE
Sbjct: 353 DVKFLHKS--TNVFASVGNDGSMRVFDLRSLEHSTIIYE 389
Score = 142 (55.0 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV----ARLNN-HRACVNGIAWAPHS 284
LL L+ + D ++LA V +N+ ++II+D+R+P PV A L + + +N I W P S
Sbjct: 422 LLTLSTSNVDQHHLAAVGVNSNQIIIIDMRMPGLPVVIIDASLGGMNNSSINSIKWHPTS 481
Query: 285 SCHICTAGDDHQALIWDIQQMPRA 308
+ ++ + GDD QAL+WDI + A
Sbjct: 482 N-YLLSGGDDCQALVWDINNLSNA 504
Score = 119 (46.9 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
M V+I+D + +NN + +N I W P S+ ++ + GDD QAL+WDI +
Sbjct: 452 MPGLPVVIIDASL-----GGMNN--SSINSIKWHPTSN-YLLSGGDDCQALVWDINNLSN 503
Query: 308 A--------------IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
A I+ P+LAY+ EIN + W Q DW+ + K + + +
Sbjct: 504 ATNGSTNGSNHSGRIIDTPVLAYSE-DLEINNVCWRQNQGDWMGVVSGKGFQAVSI 558
Score = 90 (36.7 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 19/65 (29%), Positives = 40/65 (61%)
Query: 8 VPPTTQKEIYKYEAPWPLYSMNWS-VRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFG 66
+PPT + Y + +PLY+ +W+ + ++ +A+GSY E + NK++IV + +EF
Sbjct: 101 IPPTPLERNSYYFSEFPLYACDWTCLNNGQMDCIAVGSYKETFANKLEIVHGSNYENEFN 160
Query: 67 PKSTI 71
++++
Sbjct: 161 MENSL 165
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 37/136 (27%), Positives = 56/136 (41%)
Query: 26 YSMNWSVRP--DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI 83
++M S+ P D F + Y +I + +E F + YP T + W
Sbjct: 159 FNMENSLSPGTDNSFNYNNKNNTNAYYEDEEIASRDEGFC-FQKVCDVTLDYPITHLQWD 217
Query: 84 PDR-----KGVFPDLLATSGDYLRVWRA---GEPETRLEC--ILNNNKNSDFCAPLTSFD 133
P GV + LATS + LR+++ G L+ +L NN S C+ TS +
Sbjct: 218 PSMLSYGSSGV--ERLATSSEVLRLYKVANNGNDSYSLQQTHVLANNTAS--CSS-TSSN 272
Query: 134 WNEVDPNLLGTSSIDT 149
N N G+SS T
Sbjct: 273 SN----NSSGSSSART 284
>ASPGD|ASPL0000042232 [details] [associations]
symbol:AN1695 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001307 EMBL:AACD01000026
eggNOG:NOG314410 KO:K11805 OrthoDB:EOG48PQTZ RefSeq:XP_659299.1
ProteinModelPortal:Q5BCN5 EnsemblFungi:CADANIAT00008338
GeneID:2875575 KEGG:ani:AN1695.2 HOGENOM:HOG000189437 OMA:RFCANSV
Uniprot:Q5BCN5
Length = 609
Score = 360 (131.8 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 89/216 (41%), Positives = 120/216 (55%)
Query: 109 PETRLE--CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166
P +L +L+N+K+ + AP+TS DWN + P+L+ TSSIDTTCTIW + T
Sbjct: 336 PAAKLSPLALLSNSKSPEHTAPITSLDWNTISPSLIITSSIDTTCTIWDIPTLTA----- 390
Query: 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-- 224
KTQLIAHDKEVYD+ F D+F S GA+GSVRMFDLR LEHSTIIYE
Sbjct: 391 ------KTQLIAHDKEVYDVRF--CANSVDVFVSCGADGSVRMFDLRSLEHSTIIYEPTE 442
Query: 225 ---------------PQHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA 266
P T PLLR++ + D + LA + ++ V +LDVR P +
Sbjct: 443 KNEKLMSPGNGSPSAPTTTWPPPLLRISASPHDAHLLATFSQDSNIVRVLDVRQPGQALL 502
Query: 267 RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 302
L H A +N + W+P+ + + DD L+WD+
Sbjct: 503 ELKGHSAPLNTVEWSPNRRGVLASGADDCLVLLWDL 538
Score = 264 (98.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 78/213 (36%), Positives = 111/213 (52%)
Query: 39 RLAIGSYVEEYNNKVQIVALN--------EDIS------EFGPKSTIDHPYPTTKIMWIP 84
++A+GSY+E+++N +QI+ + D S E+ + H YP T+I+W P
Sbjct: 232 KIALGSYLEDHHNYIQILDTHLAYPDPDTPDASAGELKLEYVKSAEATHSYPVTRILWEP 291
Query: 85 -DRKGVFPDLLATSGDYLRVWRA--GEPETRLECILNNNKNSDFCA----PLTSFDWNEV 137
+ DLLATSGD+LR+W +P+ I + D A PL N
Sbjct: 292 PSSQKQSTDLLATSGDHLRLWSLPNSQPQHSSNSITRPSGQRDMPAAKLSPLALLS-NSK 350
Query: 138 DPN------LLGTSSIDTTCTIWC-LETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
P L ++I + I ++T + + +++ KTQLIAHDKEVYD+ F
Sbjct: 351 SPEHTAPITSLDWNTISPSLIITSSIDTTCTIWDIPTLTA--KTQLIAHDKEVYDVRF-- 406
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223
D+F S GA+GSVRMFDLR LEHSTIIYE
Sbjct: 407 CANSVDVFVSCGADGSVRMFDLRSLEHSTIIYE 439
Score = 85 (35.0 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 19 YEAPWPLYSMNW-----SVRPDKLF-RLAIGSYVEEYNNKVQIV 56
Y PWP+Y+++W S P ++A+GSY+E+++N +QI+
Sbjct: 206 YITPWPIYAVDWCKWPISGNPGSFGGKIALGSYLEDHHNYIQIL 249
Score = 39 (18.8 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 49 YNNKVQIVALNEDISEFG--PKSTIDHPYPTTKIMWIP 84
YN + + + + S G P+ + H YPT+ +P
Sbjct: 16 YNRQPEELHIPAGNSTSGGHPRQPMSHEYPTSPDTHLP 53
>SGD|S000006168 [details] [associations]
symbol:YPL247C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000006168 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006949 EMBL:Z67751 eggNOG:NOG314410
HOGENOM:HOG000260968 KO:K11805 GeneTree:ENSGT00390000006939
OrthoDB:EOG48PQTZ EMBL:Z73603 PIR:S61017 RefSeq:NP_015077.1
ProteinModelPortal:Q12523 SMR:Q12523 DIP:DIP-6366N IntAct:Q12523
MINT:MINT-685692 STRING:Q12523 PaxDb:Q12523 PeptideAtlas:Q12523
PRIDE:Q12523 EnsemblFungi:YPL247C GeneID:855829 KEGG:sce:YPL247C
CYGD:YPL247c OMA:NTFPPVT NextBio:980386 Genevestigator:Q12523
GermOnline:YPL247C Uniprot:Q12523
Length = 523
Score = 298 (110.0 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 81/238 (34%), Positives = 127/238 (53%)
Query: 3 GHASGVPPTTQ------KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIV 56
G+A+ +P + + +Y++ +PL+ ++WS D + +GSY E+ NK+Q++
Sbjct: 103 GYAANIPVVSNLMNPSMASVCEYQSHYPLFGLDWSA--DDY--VCLGSYKEDSRNKLQVL 158
Query: 57 ALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECI 116
N D+ + D YP +KI W+P + ++P LAT D LR+W E + +
Sbjct: 159 HSN-DLLSWESVVDADVVYPVSKIQWVPSQ--LYPRKLATCSDSLRIWSVSPEERQFQEQ 215
Query: 117 LNNNK---NSDFCA-PLTSFDWNEVD--PNLLGT--SSIDTTCTIWC-LETNQVVGRVNS 167
+N + N A P + D + P + +++DT I ++T +V + S
Sbjct: 216 INLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQS 275
Query: 168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP 225
S +VKTQLIAHD EV+D+ F +FAS G +GSVR+FDLR L HSTIIYE P
Sbjct: 276 -SHYVKTQLIAHDSEVFDVRFLTKS--TQLFASCGGDGSVRVFDLRSLAHSTIIYEPP 330
Score = 275 (101.9 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 72/190 (37%), Positives = 99/190 (52%)
Query: 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA 187
P+TSFDWN VD NL+ +SSIDTTC +W L++ S +VKTQLIAHD EV+D+
Sbjct: 245 PITSFDWNTVDTNLIISSSIDTTCIVWDLQS----------SHYVKTQLIAHDSEVFDVR 294
Query: 188 F--------SRAGGGRDM--FASVGAEGSVRMFD-----LRHLEHSTIIYEDPQHTPLLR 232
F + GG + F S +++ + TI LLR
Sbjct: 295 FLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLR 354
Query: 233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG 292
L + DPN LA A ++ ++IILD+R P +P+ L H + VNGI W P + + G
Sbjct: 355 LEPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCG 414
Query: 293 DDHQALIWDI 302
DD Q L WD+
Sbjct: 415 DDCQVLYWDL 424
Score = 78 (32.5 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 32/162 (19%), Positives = 67/162 (41%)
Query: 196 DMFASVGAEGS-VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI 254
++ A+ A+ + + + D+R+ E S I+ + + + W+ N L + C+V+
Sbjct: 363 NVLATFAADSNKIIILDMRNPE-SPILNLQGHGSSVNGIKWHPTKRNVLLSCG-DDCQVL 420
Query: 255 ILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAG------DDHQALIWDIQQMPR 307
D+ + + ++G + P + G +D +L + +Q+ +
Sbjct: 421 YWDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNSKQVCK 480
Query: 308 AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
+E P + Y EIN I W + DW K + +RV
Sbjct: 481 TLETPNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 142 (55.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 45/180 (25%), Positives = 83/180 (46%)
Query: 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA 187
P TS WN + L + S D T + W L +S S +K + +H+K+V D+
Sbjct: 186 PCTSVCWNFLSKGTLVSGSQDATLSCWDLNA---YNESDSASV-LKVHISSHEKQVSDVR 241
Query: 188 FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HT-PLLRLAWNKQDPNYLAM 245
F +D+ ASV + + + D+R + ST H+ P+ +A+N + LA
Sbjct: 242 FHYKH--QDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILAT 299
Query: 246 VAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305
+ + + + D+R + L H V I+++PH + + D + L+WD+ ++
Sbjct: 300 CSTDKT-IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRI 358
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 139 (54.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 52/172 (30%), Positives = 79/172 (45%)
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
S D+N + TSS D T +W ++ R SV +T H VY ++
Sbjct: 111 SVDYNPTRRDSFLTSSWDDTVKLWAMD------RPASV----RT-FKEHAYCVYQAVWNP 159
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT-PLLRLAWNKQDPNYLAMVAMN 249
G D+FAS + ++R++D+R ST+I P H +L WNK D LA +++
Sbjct: 160 KHG--DVFASASGDCTLRIWDVRE-PGSTMII--PAHDFEILSCDWNKYDDCILATSSVD 214
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
V + DVR P+A LN H V + ++PH I + D +WD
Sbjct: 215 KT-VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 141 (54.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 54/226 (23%), Positives = 99/226 (43%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN L+ ++S D T W + NQ V G + + K H+ V D+A+
Sbjct: 180 WNPNKEGLILSASDDQTVCHWDINANQNVAGELQA-----KDVFKGHESVVEDVAWHVLH 234
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
G +F SVG + + ++D+R I D + LA+N LA + +
Sbjct: 235 DG--VFGSVGDDKKLLIWDVRTSTPGHCI--DAHSAEVNCLAFNPYSEFILATGSADKT- 289
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAIE 310
V + D+R + +HR + + W+PH+ + ++G D + +WD+ ++ ++ E
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAE 349
Query: 311 D-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
D P L + G +I+ W +P W+ +C +L+V
Sbjct: 350 DAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-VCSVSEDNILQV 393
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 39 WPSLSVQWLPD 49
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 141 (54.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 54/226 (23%), Positives = 99/226 (43%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN L+ ++S D T W + NQ V G + + K H+ V D+A+
Sbjct: 180 WNPNKEGLILSASDDQTVCHWDINANQNVAGELQA-----KDVFKGHESVVEDVAWHVLH 234
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
G +F SVG + + ++D+R I D + LA+N LA + +
Sbjct: 235 DG--VFGSVGDDKKLLIWDVRTSTPGHCI--DAHSAEVNCLAFNPYSEFILATGSADKT- 289
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAIE 310
V + D+R + +HR + + W+PH+ + ++G D + +WD+ ++ ++ E
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAE 349
Query: 311 D-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
D P L + G +I+ W +P W+ +C +L+V
Sbjct: 350 DAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-VCSVSEDNILQV 393
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 39 WPSLSVQWLPD 49
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 52/217 (23%), Positives = 91/217 (41%)
Query: 134 WN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + NLL S T C +W + G+V KT H V D+++
Sbjct: 185 WNPNLSGNLLSASDDHTIC-LWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHLLH 239
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 240 --ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQMP 306
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q P
Sbjct: 298 -VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Query: 307 RAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 28/108 (25%), Positives = 50/108 (46%)
Query: 232 RLAWNKQDPNYLAMVAMNACEVIILD-VRVP--------CTPVARLNNHRACVNGIAWAP 282
R + Q+P +A +C+V++ D + P C P RL H+ G++W P
Sbjct: 129 RARYMPQNPCIIA-TKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNP 187
Query: 283 HSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAAGGEINQIQW 328
+ S ++ +A DDH +WDI +P+ + D +T + + W
Sbjct: 188 NLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 52/217 (23%), Positives = 91/217 (41%)
Query: 134 WN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + NLL S T C +W + G+V KT H V D+++
Sbjct: 185 WNPNLSGNLLSASDDHTIC-LWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHLLH 239
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 240 --ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQMP 306
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q P
Sbjct: 298 -VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Query: 307 RAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 52/217 (23%), Positives = 91/217 (41%)
Query: 134 WN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + NLL S T C +W + G+V KT H V D+++
Sbjct: 185 WNPNLSGNLLSASDDHTIC-LWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHLLH 239
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 240 --ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQMP 306
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q P
Sbjct: 298 -VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Query: 307 RAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/219 (24%), Positives = 94/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + T G++ KT H V D+++
Sbjct: 185 WN---PNLSGCLLSASDDHTICLWDISTVPKEGKIVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ-LIAHDKEVYDIAFS 189
+ DW+ P L T +W +S S HV + + H + V D+ +S
Sbjct: 218 ALDWSPRVPGRLLTGDCQKNIHLWT--------PTDSGSWHVDQRPFVGHTRSVEDLQWS 269
Query: 190 RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLR-LAWNKQDPNYLAMVA 247
+FAS A+ S+R++D+R + P H + ++W++Q+P L+
Sbjct: 270 PTED--TVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFLLSGGD 327
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD--IQQM 305
A +V L +PVA H A V + W P S +G D+Q WD +++
Sbjct: 328 DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERD 387
Query: 306 PRA 308
P A
Sbjct: 388 PEA 390
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 150 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 202
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 203 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 260
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 261 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 319
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 320 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 356
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 132 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 191
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 192 TAVVEDVSW 200
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 49/206 (23%), Positives = 87/206 (42%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCL-ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
W+ + L T I +W + E Q N ++GH K+ V D+A+S
Sbjct: 236 WSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKS--------VEDLAWSPTE 287
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTII--YEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250
G + AS A+GS++++D R + + + + ++WN+ + N + +
Sbjct: 288 TG--LLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHE-NLIVSGGDDG 344
Query: 251 CEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308
E+ I ++ PVA H + + + W PH + +G+D Q IWDI
Sbjct: 345 -ELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADG 403
Query: 309 ---IED--PILAYTAAG-GEINQIQW 328
IE P L + G E+ ++ W
Sbjct: 404 QTNIEGVPPQLMFVHMGQNEVKEVHW 429
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + G+V KT H V D+++
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
P ED P L + G +I+ W +P W+ IC
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
C P RL H+ G++W P+ S H+ +A DDH +WDI +P+ + D +T
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
+ + W
Sbjct: 227 TAVVEDVSW 235
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 54/227 (23%), Positives = 98/227 (43%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRA 191
WN L+ ++S D T W + N +G +K + I H+ V D+A+
Sbjct: 180 WNPNKEGLILSASDDQTVCHWDINGNA------GANGELKAREIFKGHESVVEDVAWHVL 233
Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251
G +F SVG + + ++DLR I D + LA+N LA + +
Sbjct: 234 HDG--VFGSVGDDKKLLIWDLRTNVPGHAI--DAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +HR + + W+PH+ + ++G D + +WD+ ++ +
Sbjct: 290 -VALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTA 348
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
ED P L + G +I+ W +P W+ +C +L+V
Sbjct: 349 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-VCSVSEDNILQV 393
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 133 (51.9 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 59/232 (25%), Positives = 105/232 (45%)
Query: 112 RLECILNNNKNSDFCAPLTSF-DWNEVDPNL---LGTSSIDTTCTIWCLETNQVVGRVNS 167
+L+ ++N+ N+D P + F + E+ NL L S +TT +I+ Q V RV
Sbjct: 71 QLQMLINSLLNNDEQLPYSFFVNDQEITNNLKNHLEGLSDETTLSIYYQP--QAVFRVRP 128
Query: 168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227
V+ + + H + V + AFS G G F SVG + +VR++D+ ST + H
Sbjct: 129 VT-RCASSMSGHTEAVLNCAFSPDGKG---FVSVGGDTTVRIWDIYT---STPTHTLKGH 181
Query: 228 TP-LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-----LNNHRACVNGIAWA 281
T +L++AW+ D +A M D+R+ C + L H + G++W
Sbjct: 182 TNWVLQVAWSP-DSKKIATAGMEG------DIRIWCPQTGKQLGSTLKGHTKFITGLSWE 234
Query: 282 P---HSSC-HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG 329
P + C + ++ D IWD + + + +T + + ++WG
Sbjct: 235 PFHLNPKCVRLASSSKDSTIRIWDTESCKNLMS--LSGHTMS---VTCLKWG 281
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 130 (50.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 59 NEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFPDLLAT-SGDY-LRVWRAGEPETRLEC 115
++D EF S+++ H Y + W D G LLAT S D + +W+ E + EC
Sbjct: 99 SKDELEFTHVSSLEGHTYEVKSVAW--DSTGT---LLATCSRDKSIWIWQM-EDDNDFEC 152
Query: 116 I-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT 174
+ +N+ D L W+ + LL +SS D T W + G ++
Sbjct: 153 LSINSGHGQDIKCVL----WHP-NEELLASSSYDDTIKFW----KDIDGDWECIN----- 198
Query: 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM--FDLRHLEHSTII-YEDPQHTPLL 231
L H+ ++D+AF++ G D S G + V FD + + I +++ P+
Sbjct: 199 TLTGHESSIWDLAFNKDG---DKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIY 255
Query: 232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP------VARLNNHRACVNGIAWAPHSS 285
+ W+ + A ++ +I + TP + + N H + VN W P
Sbjct: 256 SIDWSSLTNTIVTGSADDS--IIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFK 313
Query: 286 CHICTAGDDHQALIWDIQ 303
+ + GDD IW++Q
Sbjct: 314 NILASCGDDGFIKIWELQ 331
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/187 (27%), Positives = 82/187 (43%)
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
S DWN V + T S D + IW N + R +KT H +Y +S
Sbjct: 109 SVDWNLVTKDTFITGSWDQSIKIW----NPRMDR------SLKT-FREHRYCIYSAIWSP 157
Query: 191 AGGGRDMFASVGAEGSVRMFDLR-HLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN 249
+FASV + +++++D R + +TI D + +L WNK + + +++
Sbjct: 158 RNA--HLFASVSGDRTLKIWDSRDNRSLNTIKAHDHE---ILTCDWNKYNDKEVVTGSVD 212
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI 309
+ I D+R P P L H V I +PHS + + D ++WD RA
Sbjct: 213 KT-IRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWD-----RAR 266
Query: 310 E-DPILA 315
E DPI+A
Sbjct: 267 EQDPIIA 273
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 169 SGHVKTQ-LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQ 226
S HV + + H + V D+ +S +FAS A+ S+R++D+R + ++
Sbjct: 249 SWHVDQRPFVGHTRSVEDLQWSPTEN--TVFASCSADASIRIWDIRAAPSKACMLTTATA 306
Query: 227 HTPLLR-LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS 285
H + ++W++++P L+ A ++ L +PVA H A V + W P S
Sbjct: 307 HDGDVNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDS 366
Query: 286 CHICTAGDDHQALIWD--IQQMPRA--IE-DPILA 315
+G DHQ WD +++ P A +E DP LA
Sbjct: 367 GVFAASGADHQITQWDLAVERDPEAGDVEADPGLA 401
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/180 (27%), Positives = 83/180 (46%)
Query: 177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH-TPLLRLAW 235
++H V D+ +S + +++F+S +G+ R++D+R+ + ++ + + + L+W
Sbjct: 288 LSHTAAVEDLQWSPSE--KNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSW 345
Query: 236 NKQDPNYLAMVAMNACEVIILDVRV------PCTPVARLNNHRACVNGIAWAPHSSCHIC 289
N + PN LA A N + D+R TPVA HRA + I W P+ I
Sbjct: 346 NTRVPNLLATGADNGVWSV-WDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIG 404
Query: 290 TAGDDHQALIWDI-------QQMPRAIED-----PILAYTAAGG-EINQIQWGATQPDWI 336
G D+Q +WD+ +Q RA E P L + G EI ++ W P I
Sbjct: 405 VVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQIPGTI 464
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 125 (49.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 47/212 (22%), Positives = 79/212 (37%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG 193
WN P L T + D +W ++T V + + H V D+ F
Sbjct: 190 WNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPI-AKYHRHTDIVNDVQFHPQHE 248
Query: 194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253
+ ASV + ++++ D R H+ + +YL A V
Sbjct: 249 A--LLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTV 306
Query: 254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ-----QMPRA 308
+ D+R P + L H V G+ W+PH + ++ D + IWD++ Q P
Sbjct: 307 ALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPED 366
Query: 309 IED--PILAYTAAG--GEINQIQWGATQPDWI 336
ED P L + G I++ W + W+
Sbjct: 367 AEDGSPELLFMHGGHTNRISEFSWCPNER-WV 397
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 75 YPTTKIMWIPDRKGV 89
+P+ I W+PD+K +
Sbjct: 51 WPSLTIQWLPDKKTI 65
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 50/216 (23%), Positives = 91/216 (42%)
Query: 134 WNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG 193
WN L ++S D T +W + V + V G KT H V D+++
Sbjct: 185 WNPYLSGYLLSASDDHTICLWDISA---VPKEGKVVG-AKTIFTGHTAVVEDVSWHLLH- 239
Query: 194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNACE 252
+F SV + + ++D R S + +T + L++N LA + +
Sbjct: 240 -ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKT- 297
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQMPR 307
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ +Q P
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 308 AIED--PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/139 (27%), Positives = 64/139 (46%)
Query: 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228
SG V T L H + + D+ + A D+ + + + ++D++ T+
Sbjct: 94 SGEVGTTLQGHTRVISDLDW--AVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAGA 151
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHI 288
++ WNK++ NYLA + +V I D R P T V L H + ++G+ W P S
Sbjct: 152 SQVK--WNKKNANYLA--TSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHIF 207
Query: 289 CTAGDDHQALIWDIQQMPR 307
T+ D+ WD +Q PR
Sbjct: 208 ATSSQDNSVKFWDYRQ-PR 225
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 128 (50.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 134 WN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + NLL S T C +W + G++ KT H V D+++
Sbjct: 185 WNPNLSGNLLSASDDHTIC-LWDISGAPKEGKIVDA----KTIFTGHTAVVEDVSWHLLH 239
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 240 --ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 298 -VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 356
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 41 WPSLTVQWLPD 51
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 75/355 (21%), Positives = 138/355 (38%)
Query: 8 VPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP 67
+P T+ E Y W + + S D+ L + V N+ Q A + D SE G
Sbjct: 49 LPEVTKPEGKDYALHWLVLGTHTS---DEQNHLVVAR-VHIPNDDAQFDASHCD-SEKGG 103
Query: 68 KST----IDHPYPTTKIMWIPDRKGVFPDLLATSG----DYLRVWRAGEPETRLECI--- 116
K I+H + ++P + +S DY + +P+ EC
Sbjct: 104 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDL 161
Query: 117 -LNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT 174
L ++ + WN + +LL S T C +W + G++ K
Sbjct: 162 RLRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KA 211
Query: 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-L 233
H V D+A+ +F SV + + ++D R S + HT + L
Sbjct: 212 IFTGHSAVVEDVAWHLLH--ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL 269
Query: 234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD 293
++N LA + + V + D+R + +H+ + + W+PH+ + ++G
Sbjct: 270 SFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 328
Query: 294 DHQALIWDIQQM--PRAIED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
D + +WD+ ++ ++ ED P L + G +I+ W +P W+ IC
Sbjct: 329 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 381
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 127 (49.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 49/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G+V K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDISAGPKEGKVVDA----KAVFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
Score = 37 (18.1 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 41 WPSLTVQWLPD 51
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 56/255 (21%), Positives = 111/255 (43%)
Query: 99 DYLRVWRAGEPETRLECI----LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW 154
DY R+ +G+P+T EC L ++ + W+ L + S D +W
Sbjct: 146 DYARL--SGKPQTS-ECDPDLRLMGHEQEGY-----GLAWSSFKEGYLLSGSQDQRICLW 197
Query: 155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR- 213
+ +N + HV H + D+A+ ++F S G + + ++DLR
Sbjct: 198 DVSATATDKVLNPM--HVYE---GHQSIIEDVAWHMKN--ENIFGSAGDDCQLVIWDLRT 250
Query: 214 -HLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR 272
++H ++E + L++N + LA + ++ V + D+R P+ L+ H
Sbjct: 251 NQMQHQVKVHE----REINYLSFNPFNEWVLATASSDST-VALFDLRKLTAPLHVLSKHE 305
Query: 273 ACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQMPRAI--ED--PILAYTAAG--G 321
V + W P+ + ++G+D + ++WDI +Q+ + ED P L ++ G
Sbjct: 306 GEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKA 365
Query: 322 EINQIQWGATQPDWI 336
+I+ W +P W+
Sbjct: 366 KISDFAWNKDEP-WV 379
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 52/219 (23%), Positives = 93/219 (42%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
WN PNL G ++S D T +W + RV K H V D+A+
Sbjct: 189 WN---PNLNGYLLSASDDHTICLWDINATPKEHRVIDA----KNIFTGHTAVVEDVAWHL 241
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
+F SV + + ++D R+ S + HT + L++N LA + +
Sbjct: 242 LH--ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PR 307
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ +
Sbjct: 300 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358
Query: 308 AIED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
+ ED P L + G +I+ W +P WI IC
Sbjct: 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WI-IC 395
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 126 (49.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 49/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G+V K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDISAGPKEGKVVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
Score = 37 (18.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 41 WPSLTVQWLPD 51
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 195 RDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253
+D+F +V + +++ D+R ++TI + PQ P LA++ N LA M++ V
Sbjct: 221 KDLFGTVSEDSLLKINDVR-ANNTTIDTVKCPQ--PFNTLAFSHHSSNLLAAAGMDSY-V 276
Query: 254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM-----PRA 308
+ D+R P+ ++ H VN + ++ H + ++G D++ ++WD++Q+ P
Sbjct: 277 YLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDD 336
Query: 309 IED--PILAYTAAG--GEINQIQWGATQPDWI 336
ED P L AG +N P W+
Sbjct: 337 AEDGVPELIMVHAGHRSSVNDFDLNPQIP-WL 367
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 175 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 229
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 230 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 287
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 288 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 346
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 347 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 381
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 184 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 238
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 239 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 297 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 390
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 228 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 282
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 283 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 340
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 341 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 399
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 400 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 434
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 228 WNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 282
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 283 --ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 340
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 341 -VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 399
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 400 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 434
>UNIPROTKB|C9J4Z7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927612
ProteinModelPortal:C9J4Z7 SMR:C9J4Z7 STRING:C9J4Z7
Ensembl:ENST00000455009 ArrayExpress:C9J4Z7 Bgee:C9J4Z7
Uniprot:C9J4Z7
Length = 128
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9J6C8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00925033
ProteinModelPortal:C9J6C8 SMR:C9J6C8 STRING:C9J6C8
Ensembl:ENST00000431816 ArrayExpress:C9J6C8 Bgee:C9J6C8
Uniprot:C9J6C8
Length = 133
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9JBJ7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927206
ProteinModelPortal:C9JBJ7 SMR:C9JBJ7 STRING:C9JBJ7
Ensembl:ENST00000414376 HOGENOM:HOG000195746 ArrayExpress:C9JBJ7
Bgee:C9JBJ7 Uniprot:C9JBJ7
Length = 102
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9JEY1 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00924615
ProteinModelPortal:C9JEY1 SMR:C9JEY1 STRING:C9JEY1
Ensembl:ENST00000417330 ArrayExpress:C9JEY1 Bgee:C9JEY1
Uniprot:C9JEY1
Length = 130
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9JFG9 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JFG9 SMR:C9JFG9
Ensembl:ENST00000427217 Bgee:C9JFG9 Uniprot:C9JFG9
Length = 133
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9JQM8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JQM8 SMR:C9JQM8
Ensembl:ENST00000458033 Bgee:C9JQM8 Uniprot:C9JQM8
Length = 133
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9JTT6 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925248 ProteinModelPortal:C9JTT6 SMR:C9JTT6
STRING:C9JTT6 Ensembl:ENST00000418347 ArrayExpress:C9JTT6
Bgee:C9JTT6 Uniprot:C9JTT6
Length = 83
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|C9K057 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927861
ProteinModelPortal:C9K057 SMR:C9K057 STRING:C9K057
Ensembl:ENST00000443222 ArrayExpress:C9K057 Bgee:C9K057
Uniprot:C9K057
Length = 108
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVR-VPCTPVARLNNHRACVNGIAWAPHSSCH 287
P+ AWNK D +A + N EV I + T V L H V GI WAP S+
Sbjct: 10 PISCHAWNK-DRTQIA-ICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESN-R 66
Query: 288 ICTAGDDHQALIWDIQ 303
I T G D A +W ++
Sbjct: 67 IVTCGTDRNAYVWTLK 82
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 124 (48.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 134 WNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
WN + +LL S T C +W + G++ K H V D+A+
Sbjct: 183 WNSNLKGHLLSASDDHTVC-LWDISAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLLH 237
Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNAC 251
+F SV + + ++D R S + HT + L++N LA + +
Sbjct: 238 --ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAI 309
V + D+R + +H+ + + W+PH+ + ++G D + +WD+ ++ ++
Sbjct: 296 -VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 354
Query: 310 ED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
ED P L + G +I+ W +P W+ IC
Sbjct: 355 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 389
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 75 YPTTKIMWIPD 85
+P+ + W+PD
Sbjct: 41 WPSLTVQWLPD 51
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 60/289 (20%), Positives = 114/289 (39%)
Query: 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG----DYLRVWRAGEPETRLECI----LNNNKN 122
I+H + ++P + +SG DY + +P+ EC L ++
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTK--HPAKPDPSGECNPDLRLRGHQK 177
Query: 123 SDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181
+ WN + +LL S T C +W + G++ K H
Sbjct: 178 EGY-----GLSWNSNLSGHLLSASDDHTVC-LWDINAGPKEGKIVDA----KAVFTGHSA 227
Query: 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDP 240
V D+A+ +F SV + + M+D R S + HT + L++N
Sbjct: 228 VVEDVAWHLLH--ESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA-WAPHSSCHICTAGDDHQALI 299
LA + + V + D+R + +H+ + + W+PH+ + ++G D + +
Sbjct: 286 FILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNV 344
Query: 300 WDIQQM--PRAIED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
WD+ ++ ++ ED P L + G +I+ W +P W+ IC
Sbjct: 345 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 391
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
+ DW+ P L T +W T G N V + + H + V D+ +S
Sbjct: 219 ALDWSPRVPGRLLTGDCQKNVHLW---TPTEGGSWN-VD---QRPFVGHTRSVEDLQWSP 271
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLE-HSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAM 248
+FAS A+ S+R++D+R + ++ H + ++W++++P L+
Sbjct: 272 TED--TVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSGGDD 329
Query: 249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD--IQQMP 306
A +V L +PVA H A V + W P S +G D+Q WD +++ P
Sbjct: 330 GALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDP 389
Query: 307 RAIE---DPILA 315
+ E DP LA
Sbjct: 390 ESGETETDPGLA 401
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228
SG V T L H + + D+ + A D+ + + + ++D++ T+
Sbjct: 94 SGEVGTTLQGHTRVISDLDW--AVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAGA 151
Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHI 288
++ WNK++ N LA + +V I D R P T V L H + ++G+ W P S +
Sbjct: 152 SQVK--WNKKNANCLA--TSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHIL 207
Query: 289 CTAGDDHQALIWDIQQMPR 307
T+ D+ WD +Q PR
Sbjct: 208 ATSSQDNSVKFWDYRQ-PR 225
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 117 (46.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/157 (23%), Positives = 72/157 (45%)
Query: 177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN 236
++++K + DI +SR +FA+ G +G +R++D R +H I +T + ++W+
Sbjct: 318 VSNNKSIEDIQWSRTES--TVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWS 375
Query: 237 KQDPNYLAMVAMNACEVIILDVR--VPCT-----PVARLNNHRACVNGIAWAPHSSCHIC 289
+ LA N + D+R P PVA+ + H+ + IA+ P +
Sbjct: 376 DKIGYLLASGDDNGTWGV-WDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVA 434
Query: 290 TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI 326
+D+ +WD+ A ++ I A E+ +I
Sbjct: 435 VGSEDNTVTLWDLSV--EADDEEIKQQAAETKELQEI 469
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 10 PTTQKEIYKYEAPWPLYSMNWSVRPDKL 37
PT + ++ PWP +++ V PD L
Sbjct: 115 PTVYEMLHNVNMPWPCLTLD--VIPDTL 140
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 41/192 (21%), Positives = 87/192 (45%)
Query: 158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH 217
+++ V +N G VK + D + DI S+ G D+FA+ G +V ++D
Sbjct: 126 SDRYVYMLNKQDGKVKRSYLG-DSSLLDIDTSKGG---DLFATSGE--NVSIWDYSRDTP 179
Query: 218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNG 277
T P+++ +N + + LA M+ ++I D+R +P+ +L + N
Sbjct: 180 VTKFEWGADTLPVVK--FNYTETSVLASAGMDR-SIVIYDLRTS-SPLTKLIT-KLRTNS 234
Query: 278 IAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA 337
I+W P + + +DH ++D++ + RA+ Y + + + T ++++
Sbjct: 235 ISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALH----VYKDHVSAVMSVDFSPTGQEFVS 290
Query: 338 ICYNKYLEVLRV 349
Y+K + + V
Sbjct: 291 GSYDKTIRIYNV 302
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 40/161 (24%), Positives = 68/161 (42%)
Query: 178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK 237
+H K V D+ +S +FAS + S+R++D+R +S + + + + ++WN+
Sbjct: 270 SHSKSVEDLQWSPTEA--TVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNR 327
Query: 238 QDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA 297
+P L+ +V L PVA H A V + W+P S +G D
Sbjct: 328 TEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVI 387
Query: 298 LIWDIQ----QMPRAIED-----PILAYTAAGG-EINQIQW 328
WD+ M ED P L + G E+ ++ W
Sbjct: 388 SQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQKEVKELHW 428
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 31/131 (23%), Positives = 62/131 (47%)
Query: 176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--EDPQHTPLLRL 233
L H + V D+ +S R + AS + ++R++D R + ED + + +
Sbjct: 265 LAGHSQSVEDLQWSP--NERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVI 322
Query: 234 AWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARLNNHRACVNGIAWAPHSSCHICTA 291
+WN+ +P ++A + + I D+R P+A +H + + W+P + + +
Sbjct: 323 SWNRNEP-FIASGGDDGY-LHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASG 380
Query: 292 GDDHQALIWDI 302
GDD Q +WD+
Sbjct: 381 GDDDQIALWDL 391
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 60/292 (20%), Positives = 116/292 (39%)
Query: 27 SMNWSVRP--DKLFRLAIGSYV--EEYNNKVQIVAL-NEDISEFGPKSTIDHPYPTTKIM 81
++ WS R D LA+G Y E N ++ L NE+ P +ID +
Sbjct: 11 TLAWSPRGVNDNQALLALGGYTGTEGSKNSDTLLELWNENPESQKPVGSIDVKTRFYDLA 70
Query: 82 W---IPDRKGVFPDLLATSG----DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW 134
W + GV L G D + ++ E + ++N PL D+
Sbjct: 71 WEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSDEASASIATY--KSENGSILGPL---DF 125
Query: 135 NEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG 194
N + PNLL + +W ++ Q + + + +++ + +V I A G
Sbjct: 126 NRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSWNNKVSHIL---ASGN 182
Query: 195 RDMFASV-GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253
+ +V + ++ +L +L + + + +AW+ + LA +
Sbjct: 183 ATEYTTVWDVKLKRQVLNLSYLGAAGV---SAATGAVNSIAWHPNNATRLATAIDDNRNP 239
Query: 254 IIL--DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
IIL D+R P P L H+ ++W P + ++G D +A++W+++
Sbjct: 240 IILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSGKDGRAMVWNVE 291
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 36/171 (21%), Positives = 83/171 (48%)
Query: 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR--HLEHSTIIYEDPQHTPLLRLAWN 236
H+ + D+++ ++F S G +G + ++D R ++H ++E + L++N
Sbjct: 216 HESAIADVSWHMKN--ENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNY----LSFN 269
Query: 237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296
+ LA + ++ V + D+R P+ +++H V + W P+ + ++G+D +
Sbjct: 270 PFNEWVLATASSDST-VALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRR 328
Query: 297 ALIWDI-----QQMPRAI--ED--PILAYTAAG--GEINQIQWGATQPDWI 336
++WD+ +Q+ + ED P L ++ G +I+ W +P W+
Sbjct: 329 LMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEP-WV 378
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 40/188 (21%), Positives = 81/188 (43%)
Query: 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA 187
P+ S D+N +PNLL + D+ IW L +N S K+Q ++ +A
Sbjct: 131 PVQSIDFNVQNPNLLASGGSDSEVFIWDLSDPTQPSALNPGS---KSQ---QSSDITCVA 184
Query: 188 FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247
+++ + S G + ++DL+ + I + + + W+ + + +
Sbjct: 185 WNKKVA--HILGSASYNGYIVIWDLKSKKTLMTINDRNRKCKYRSIVWHPSEATQIVAAS 242
Query: 248 MNACEVIIL--DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW--DIQ 303
+ +I D+R +PV + H+ V G++W P + + + G D++ W D Q
Sbjct: 243 EDDDHPVIQAWDLRNTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNFDRQ 302
Query: 304 QMPRAIED 311
++ I D
Sbjct: 303 EILCEIND 310
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 48/193 (24%), Positives = 81/193 (41%)
Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ-LIAHDKEVYDIAFS 189
+ DW+ P L T +W + S HV + + H + V D+ +S
Sbjct: 219 ALDWSPRVPGRLLTGDCQKNIHLWT--------PTDGGSWHVDQRPFVGHTRSVEDLQWS 270
Query: 190 RAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQHTPLLRLA-WNKQDPNYLAMVA 247
+FAS A+ S+R++D+R + ++ H + + W+ ++P L+
Sbjct: 271 PTED--TVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLSGGD 328
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD--IQQM 305
A +V L +PVA H A V + W P S +G D+Q WD +++
Sbjct: 329 DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERD 388
Query: 306 PRAIE---DPILA 315
P A + DP LA
Sbjct: 389 PEAGDAETDPGLA 401
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 43/171 (25%), Positives = 69/171 (40%)
Query: 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ 238
H+ V D+AFS F SVG + + ++D R + E L + WN
Sbjct: 291 HEDTVEDVAFSPTSAQE--FCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPH 348
Query: 239 DPNY-LAMVAMNACEVII---LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD 294
D N L A N + L +P+ + H+A V + W+P S ++ +D
Sbjct: 349 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAED 408
Query: 295 HQALIWDIQQMP----RAIEDPI-LAYTAAG--GEINQIQWGATQPDWIAI 338
IWD ++ RA + P L + AG ++ W A+ P W +
Sbjct: 409 GLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDP-WTIV 458
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 115 (45.5 bits), Expect = 0.00079, P = 0.00079
Identities = 40/155 (25%), Positives = 72/155 (46%)
Query: 169 SGHVKTQ-LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQ 226
S HV + + H + V D+ +S +FAS A+ S+R++D+R + ++
Sbjct: 243 SWHVDQRPFMGHTRSVEDLQWSPTED--TVFASCSADASIRIWDIRAAPSKACMLTTTSA 300
Query: 227 HTPLLRLA-WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS 285
H + + W++++P L+ A ++ L +PVA H A + + W P S
Sbjct: 301 HDGDVNVINWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDS 360
Query: 286 CHICTAGDDHQALIWD--IQQMPRAIE---DPILA 315
+G D+Q WD +++ P A + DP LA
Sbjct: 361 GVFAASGADNQITQWDLAVERDPEAGDTETDPGLA 395
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 90 (36.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 126 CAPLTS--FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV 183
CA ++S F+W D +L+ T S+D TC +W ++ +G L HD E+
Sbjct: 261 CAEISSASFNW---DCSLILTGSMDKTCKLW-----------DATNGKCVATLTGHDDEI 306
Query: 184 YDIAFSRAGGGRDMFASVGAEGSVRMF 210
D F G + A+ A+G+ R+F
Sbjct: 307 LDSCFDYTG---KLIATASADGTARIF 330
Score = 67 (28.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 265 VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
+A+L H ++ I++ P + H+ T D A IWD Q
Sbjct: 338 IAKLEGHEGEISKISFNPQGN-HLLTGSSDKTARIWDAQ 375
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 120 (47.3 bits), Expect = 0.00086, P = 0.00086
Identities = 53/216 (24%), Positives = 97/216 (44%)
Query: 93 LLAT-SGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150
LLAT S D +L++W + E R + + + + C F D LL + S D T
Sbjct: 716 LLATASSDCFLKLWDLNQKECR-NTMFGHTNSVNHCR----FS---PDDKLLASCSADGT 767
Query: 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRM 209
+W +++ +N + ++ D EV S A G R M V A+ + +
Sbjct: 768 LKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIM---VAAKNKIFL 824
Query: 210 FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN 269
FD+ H H+ + ++ Q N+LA+VA++ C V + ++ C VA
Sbjct: 825 FDI-HTGGLLAEIHTGHHSTIQYCDFSPQ--NHLAVVALSQCCVELWNMD-SCLKVADCR 880
Query: 270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305
H + V+ + ++P S + T+ DD +W+ +++
Sbjct: 881 GHLSWVHCVMFSPDGSSFL-TSSDDQTIRLWETKKV 915
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 53/216 (24%), Positives = 97/216 (44%)
Query: 93 LLAT-SGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150
LLAT S D +L++W + E R + + + + C F D LL + S D T
Sbjct: 723 LLATASSDCFLKLWDLNQKECR-NTMFGHTNSVNHCR----FS---PDDKLLASCSADGT 774
Query: 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRM 209
+W +++ +N + ++ D EV S A G R M V A+ + +
Sbjct: 775 LKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIM---VAAKNKIFL 831
Query: 210 FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN 269
FD+ H H+ + ++ Q N+LA+VA++ C V + ++ C VA
Sbjct: 832 FDI-HTGGLLAEIHTGHHSTIQYCDFSPQ--NHLAVVALSQCCVELWNMD-SCLKVADCR 887
Query: 270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305
H + V+ + ++P S + T+ DD +W+ +++
Sbjct: 888 GHLSWVHCVMFSPDGSSFL-TSSDDQTIRLWETKKV 922
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 349 0.00099 116 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 624 (66 KB)
Total size of DFA: 289 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.51u 0.12s 28.63t Elapsed: 00:00:03
Total cpu time: 28.53u 0.12s 28.65t Elapsed: 00:00:03
Start: Thu Aug 15 15:42:59 2013 End: Thu Aug 15 15:43:02 2013