Query psy17690
Match_columns 545
No_of_seqs 474 out of 1660
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 20:28:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17690.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17690hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2832|consensus 100.0 5.6E-65 1.2E-69 519.8 21.5 258 40-310 102-368 (393)
2 KOG1605|consensus 100.0 1.9E-42 4.2E-47 347.5 10.2 167 106-286 77-260 (262)
3 TIGR02251 HIF-SF_euk Dullard-l 100.0 3.9E-37 8.4E-42 290.3 13.3 146 121-277 1-162 (162)
4 KOG2832|consensus 100.0 2.6E-37 5.6E-42 316.8 8.5 114 420-545 127-240 (393)
5 PF03031 NIF: NLI interacting 100.0 2.1E-36 4.5E-41 281.7 12.4 147 122-279 1-159 (159)
6 TIGR02245 HAD_IIID1 HAD-superf 100.0 5.5E-36 1.2E-40 290.4 14.0 155 119-285 19-191 (195)
7 KOG1605|consensus 100.0 1.5E-33 3.2E-38 283.4 2.2 132 302-441 130-261 (262)
8 COG5190 FCP1 TFIIF-interacting 100.0 5.9E-30 1.3E-34 268.9 9.2 281 119-435 24-377 (390)
9 TIGR02250 FCP1_euk FCP1-like p 100.0 2.2E-28 4.8E-33 229.9 10.4 123 118-252 3-154 (156)
10 COG5190 FCP1 TFIIF-interacting 99.9 6.6E-28 1.4E-32 253.5 7.7 167 106-284 199-380 (390)
11 TIGR02251 HIF-SF_euk Dullard-l 99.9 2.9E-25 6.3E-30 209.5 7.5 122 302-431 41-162 (162)
12 PF03031 NIF: NLI interacting 99.9 5.4E-25 1.2E-29 205.0 5.0 121 305-433 38-159 (159)
13 TIGR02245 HAD_IIID1 HAD-superf 99.9 3.2E-23 7E-28 201.4 6.4 131 303-441 45-193 (195)
14 smart00577 CPDc catalytic doma 99.9 3.2E-22 7E-27 185.6 11.9 130 120-258 1-148 (148)
15 TIGR02250 FCP1_euk FCP1-like p 99.7 6.3E-18 1.4E-22 159.1 5.5 93 305-408 60-154 (156)
16 KOG0323|consensus 99.5 3.1E-14 6.8E-19 157.9 7.5 119 122-252 147-297 (635)
17 smart00577 CPDc catalytic doma 99.4 2.9E-13 6.3E-18 125.7 6.7 101 306-414 48-148 (148)
18 KOG0323|consensus 98.2 1.5E-06 3.2E-11 97.6 5.7 92 305-407 203-296 (635)
19 cd01427 HAD_like Haloacid deha 97.9 1.2E-05 2.6E-10 69.9 4.4 107 123-238 1-126 (139)
20 TIGR01662 HAD-SF-IIIA HAD-supe 97.8 3.4E-05 7.4E-10 69.4 5.5 105 122-238 1-117 (132)
21 TIGR01681 HAD-SF-IIIC HAD-supe 97.7 1.7E-05 3.6E-10 72.2 2.1 106 122-237 1-120 (128)
22 TIGR01685 MDP-1 magnesium-depe 97.4 0.00019 4.2E-09 69.1 5.2 120 121-251 2-156 (174)
23 TIGR01686 FkbH FkbH-like domai 97.4 0.00022 4.8E-09 74.5 5.5 107 120-238 2-116 (320)
24 PHA03398 viral phosphatase sup 97.2 0.00085 1.8E-08 69.7 7.6 77 118-209 125-202 (303)
25 PHA02530 pseT polynucleotide k 97.2 0.00043 9.2E-09 70.9 5.2 148 83-248 130-292 (300)
26 TIGR01684 viral_ppase viral ph 97.2 0.00063 1.4E-08 70.6 6.3 74 119-207 124-198 (301)
27 PRK13288 pyrophosphatase PpaX; 97.2 0.0003 6.5E-09 68.4 3.4 94 145-247 81-177 (214)
28 PF13419 HAD_2: Haloacid dehal 97.0 0.00048 1E-08 62.8 3.4 85 145-238 76-163 (176)
29 TIGR01656 Histidinol-ppas hist 97.0 0.0016 3.4E-08 60.3 6.9 106 122-238 1-131 (147)
30 PRK13223 phosphoglycolate phos 96.9 0.00091 2E-08 68.3 4.3 93 146-247 101-196 (272)
31 TIGR00213 GmhB_yaeD D,D-heptos 96.9 0.0023 5E-08 60.9 6.6 114 122-247 2-145 (176)
32 PLN03243 haloacid dehalogenase 96.9 0.0015 3.2E-08 66.6 5.4 94 146-248 109-205 (260)
33 PRK13226 phosphoglycolate phos 96.8 0.0017 3.6E-08 64.4 5.5 94 145-247 94-190 (229)
34 TIGR00338 serB phosphoserine p 96.8 0.00092 2E-08 65.0 3.5 95 145-248 84-191 (219)
35 PRK14988 GMP/IMP nucleotidase; 96.7 0.0018 3.9E-08 64.2 4.9 93 146-247 93-188 (224)
36 PRK13222 phosphoglycolate phos 96.7 0.0024 5.1E-08 62.1 5.5 93 145-246 92-187 (226)
37 PRK11587 putative phosphatase; 96.6 0.0036 7.7E-08 61.3 5.7 92 146-247 83-177 (218)
38 PLN02575 haloacid dehalogenase 96.5 0.0034 7.4E-08 67.6 5.5 92 146-246 216-310 (381)
39 PRK13225 phosphoglycolate phos 96.5 0.0026 5.7E-08 65.3 4.4 93 146-247 142-234 (273)
40 PRK08942 D,D-heptose 1,7-bisph 96.5 0.0061 1.3E-07 58.1 6.5 109 121-240 3-135 (181)
41 PF12689 Acid_PPase: Acid Phos 96.4 0.0052 1.1E-07 59.1 5.5 105 121-238 3-137 (169)
42 PRK10725 fructose-1-P/6-phosph 96.3 0.0015 3.2E-08 61.9 1.3 81 153-243 94-177 (188)
43 COG0637 Predicted phosphatase/ 96.3 0.0019 4.1E-08 64.1 2.1 85 145-238 85-172 (221)
44 TIGR03351 PhnX-like phosphonat 96.3 0.0046 9.9E-08 60.2 4.3 94 146-247 87-185 (220)
45 PHA02597 30.2 hypothetical pro 96.3 0.0028 6.1E-08 60.8 2.8 96 145-251 73-173 (197)
46 TIGR01489 DKMTPPase-SF 2,3-dik 96.1 0.011 2.4E-07 55.5 6.0 86 145-240 71-177 (188)
47 TIGR01261 hisB_Nterm histidino 96.1 0.016 3.5E-07 55.0 6.9 116 122-248 2-143 (161)
48 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.02 4.3E-07 54.6 7.2 103 121-235 13-137 (166)
49 TIGR01549 HAD-SF-IA-v1 haloaci 96.0 0.0066 1.4E-07 55.6 3.9 79 146-236 64-145 (154)
50 TIGR01672 AphA HAD superfamily 95.7 0.018 3.8E-07 58.3 5.7 79 119-206 61-169 (237)
51 PF05152 DUF705: Protein of un 95.7 0.026 5.6E-07 58.4 6.7 74 119-207 120-194 (297)
52 PLN02940 riboflavin kinase 95.6 0.0073 1.6E-07 64.9 2.7 93 146-247 93-189 (382)
53 PRK09552 mtnX 2-hydroxy-3-keto 95.6 0.034 7.3E-07 54.6 7.1 95 145-247 73-182 (219)
54 TIGR01689 EcbF-BcbF capsule bi 95.6 0.021 4.7E-07 52.4 5.2 73 122-205 2-87 (126)
55 TIGR01668 YqeG_hyp_ppase HAD s 95.5 0.017 3.8E-07 54.9 4.7 95 120-236 24-119 (170)
56 PRK06769 hypothetical protein; 95.4 0.029 6.2E-07 53.5 5.6 108 122-240 5-125 (173)
57 PRK13582 thrH phosphoserine ph 95.1 0.016 3.5E-07 55.6 3.1 90 146-248 68-167 (205)
58 PRK06698 bifunctional 5'-methy 95.1 0.021 4.5E-07 62.7 4.1 90 146-246 330-421 (459)
59 PRK05446 imidazole glycerol-ph 95.0 0.064 1.4E-06 57.4 7.4 116 121-247 2-143 (354)
60 TIGR01663 PNK-3'Pase polynucle 94.6 0.07 1.5E-06 59.9 6.8 106 120-237 167-296 (526)
61 PRK08238 hypothetical protein; 94.6 0.029 6.4E-07 62.2 3.7 75 119-205 8-119 (479)
62 COG4996 Predicted phosphatase 94.3 0.13 2.7E-06 47.9 6.5 120 123-252 2-146 (164)
63 TIGR01670 YrbI-phosphatas 3-de 94.2 0.053 1.2E-06 50.7 4.1 108 122-247 2-114 (154)
64 PRK11009 aphA acid phosphatase 94.1 0.14 2.9E-06 52.0 7.0 80 118-205 60-170 (237)
65 TIGR01509 HAD-SF-IA-v3 haloaci 94.1 0.056 1.2E-06 50.3 4.0 84 145-238 84-170 (183)
66 PRK11133 serB phosphoserine ph 94.0 0.06 1.3E-06 56.8 4.4 95 145-248 180-287 (322)
67 COG0560 SerB Phosphoserine pho 93.4 0.14 2.9E-06 50.9 5.6 87 145-240 76-175 (212)
68 TIGR02253 CTE7 HAD superfamily 93.4 0.11 2.3E-06 50.5 4.7 82 145-235 93-177 (221)
69 TIGR01454 AHBA_synth_RP 3-amin 93.1 0.093 2E-06 50.6 3.8 94 145-247 74-170 (205)
70 TIGR02137 HSK-PSP phosphoserin 93.0 0.096 2.1E-06 51.5 3.7 49 145-203 67-115 (203)
71 TIGR01449 PGP_bact 2-phosphogl 92.9 0.14 3E-06 49.3 4.6 95 145-248 84-181 (213)
72 PF08645 PNK3P: Polynucleotide 92.9 0.26 5.6E-06 46.7 6.4 106 122-237 1-130 (159)
73 TIGR01533 lipo_e_P4 5'-nucleot 92.8 0.24 5.3E-06 51.0 6.5 78 120-205 74-172 (266)
74 PLN02770 haloacid dehalogenase 92.4 0.17 3.6E-06 50.9 4.7 95 145-248 107-204 (248)
75 TIGR02254 YjjG/YfnB HAD superf 92.0 0.21 4.7E-06 48.2 4.7 92 145-246 96-192 (224)
76 PRK09484 3-deoxy-D-manno-octul 91.9 0.15 3.3E-06 49.0 3.5 111 120-247 20-134 (183)
77 PLN02954 phosphoserine phospha 91.8 0.16 3.6E-06 49.4 3.7 86 146-241 84-185 (224)
78 KOG3109|consensus 91.4 0.2 4.2E-06 50.3 3.7 84 145-239 99-192 (244)
79 TIGR01459 HAD-SF-IIA-hyp4 HAD- 91.3 0.38 8.2E-06 48.1 5.8 95 121-235 8-105 (242)
80 TIGR01491 HAD-SF-IB-PSPlk HAD- 91.3 0.28 6E-06 46.6 4.6 87 145-240 79-178 (201)
81 TIGR02009 PGMB-YQAB-SF beta-ph 91.3 0.12 2.6E-06 48.5 2.1 85 145-240 87-174 (185)
82 TIGR01993 Pyr-5-nucltdase pyri 91.3 0.093 2E-06 49.7 1.3 82 145-238 83-171 (184)
83 PRK10826 2-deoxyglucose-6-phos 91.0 0.28 6.1E-06 47.9 4.4 94 146-248 92-188 (222)
84 PRK09449 dUMP phosphatase; Pro 90.8 0.33 7.2E-06 47.2 4.8 91 145-245 94-189 (224)
85 TIGR01428 HAD_type_II 2-haloal 90.6 0.36 7.9E-06 46.1 4.8 85 146-239 92-179 (198)
86 PRK00192 mannosyl-3-phosphogly 90.1 0.46 1E-05 48.3 5.2 57 121-193 4-60 (273)
87 TIGR01544 HAD-SF-IE haloacid d 90.0 0.64 1.4E-05 48.2 6.2 89 144-240 119-226 (277)
88 COG0561 Cof Predicted hydrolas 89.7 0.58 1.2E-05 47.0 5.5 59 121-195 3-61 (264)
89 PRK03669 mannosyl-3-phosphogly 88.6 0.52 1.1E-05 47.8 4.3 60 118-193 4-63 (271)
90 PF11019 DUF2608: Protein of u 88.5 0.75 1.6E-05 47.0 5.4 110 120-237 19-190 (252)
91 TIGR02461 osmo_MPG_phos mannos 88.3 0.74 1.6E-05 45.8 5.1 53 124-193 2-54 (225)
92 PF13344 Hydrolase_6: Haloacid 88.1 0.82 1.8E-05 40.0 4.7 52 124-192 1-52 (101)
93 TIGR01487 SPP-like sucrose-pho 87.2 0.95 2.1E-05 44.1 5.0 56 122-193 2-57 (215)
94 TIGR01422 phosphonatase phosph 87.0 0.85 1.9E-05 45.5 4.7 94 145-247 98-196 (253)
95 TIGR02252 DREG-2 REG-2-like, H 87.0 0.81 1.7E-05 43.8 4.4 80 146-235 105-187 (203)
96 TIGR01548 HAD-SF-IA-hyp1 haloa 86.9 1 2.2E-05 43.2 5.0 81 147-236 107-189 (197)
97 PRK09456 ?-D-glucose-1-phospha 86.8 0.38 8.2E-06 46.4 2.0 97 146-251 84-184 (199)
98 TIGR03333 salvage_mtnX 2-hydro 86.5 1.3 2.8E-05 43.4 5.5 46 145-198 69-114 (214)
99 PF08282 Hydrolase_3: haloacid 86.5 0.45 9.7E-06 45.9 2.3 54 124-193 1-54 (254)
100 smart00775 LNS2 LNS2 domain. T 86.3 0.91 2E-05 42.9 4.2 59 124-191 2-67 (157)
101 PRK10444 UMP phosphatase; Prov 85.5 1.6 3.5E-05 44.2 5.9 54 123-193 3-56 (248)
102 TIGR02463 MPGP_rel mannosyl-3- 85.2 1.3 2.7E-05 43.2 4.7 54 124-193 2-55 (221)
103 TIGR02247 HAD-1A3-hyp Epoxide 84.8 0.69 1.5E-05 44.6 2.7 94 145-247 93-191 (211)
104 PLN02779 haloacid dehalogenase 84.7 0.64 1.4E-05 48.0 2.6 94 145-247 143-241 (286)
105 PRK10530 pyridoxal phosphate ( 83.9 2.2 4.7E-05 42.7 5.9 57 121-193 3-59 (272)
106 PRK01158 phosphoglycolate phos 83.8 1.8 4E-05 42.1 5.3 56 122-193 4-59 (230)
107 TIGR01486 HAD-SF-IIB-MPGP mann 83.8 1.5 3.3E-05 43.9 4.8 54 124-193 2-55 (256)
108 TIGR00099 Cof-subfamily Cof su 83.8 1.6 3.4E-05 43.6 4.8 54 124-193 2-55 (256)
109 PRK13478 phosphonoacetaldehyde 83.7 2 4.3E-05 43.4 5.6 93 146-247 101-198 (267)
110 PF09419 PGP_phosphatase: Mito 83.2 1.2 2.7E-05 42.9 3.6 94 119-235 39-146 (168)
111 COG2503 Predicted secreted aci 82.9 1.2 2.7E-05 45.4 3.5 69 119-222 77-164 (274)
112 TIGR01990 bPGM beta-phosphoglu 82.8 0.89 1.9E-05 42.6 2.5 84 146-240 87-173 (185)
113 COG2179 Predicted hydrolase of 82.6 2.6 5.7E-05 40.8 5.5 95 119-235 26-120 (175)
114 COG1011 Predicted hydrolase (H 82.6 1.7 3.8E-05 42.0 4.5 84 145-238 98-184 (229)
115 PRK14502 bifunctional mannosyl 82.3 2.6 5.7E-05 48.8 6.3 60 118-193 413-472 (694)
116 TIGR01484 HAD-SF-IIB HAD-super 81.9 1.4 3E-05 42.4 3.4 54 123-191 1-54 (204)
117 PRK10513 sugar phosphate phosp 81.2 1.8 4E-05 43.3 4.2 57 121-193 3-59 (270)
118 PLN02645 phosphoglycolate phos 80.9 2.6 5.7E-05 43.9 5.4 55 122-193 29-83 (311)
119 PTZ00445 p36-lilke protein; Pr 80.6 1.7 3.7E-05 43.6 3.6 122 119-251 41-204 (219)
120 TIGR01691 enolase-ppase 2,3-di 80.5 1.9 4.2E-05 43.1 4.0 94 145-246 94-190 (220)
121 PRK12702 mannosyl-3-phosphogly 80.4 2.9 6.4E-05 43.9 5.4 56 122-193 2-57 (302)
122 PRK10563 6-phosphogluconate ph 80.3 1.5 3.3E-05 42.6 3.2 93 145-249 87-183 (221)
123 PRK10976 putative hydrolase; P 80.3 2.5 5.5E-05 42.3 4.9 56 122-193 3-58 (266)
124 COG0241 HisB Histidinol phosph 79.7 5.2 0.00011 39.1 6.6 125 121-254 5-154 (181)
125 TIGR01482 SPP-subfamily Sucros 79.7 2.7 5.9E-05 40.7 4.7 54 124-193 1-54 (225)
126 TIGR01458 HAD-SF-IIA-hyp3 HAD- 79.4 3.6 7.8E-05 41.7 5.7 59 122-193 2-60 (257)
127 PRK15126 thiamin pyrimidine py 78.9 2.8 6E-05 42.3 4.6 56 122-193 3-58 (272)
128 PRK10725 fructose-1-P/6-phosph 78.6 1.6 3.4E-05 41.1 2.6 86 309-403 93-181 (188)
129 PLN02919 haloacid dehalogenase 77.9 2.8 6.2E-05 51.1 5.1 92 147-246 162-256 (1057)
130 PF06888 Put_Phosphatase: Puta 77.6 6.1 0.00013 40.1 6.6 49 145-200 70-118 (234)
131 TIGR01488 HAD-SF-IB Haloacid D 77.5 5.8 0.00012 36.7 6.1 50 145-203 72-121 (177)
132 TIGR02254 YjjG/YfnB HAD superf 77.4 3.5 7.6E-05 39.7 4.7 88 306-402 100-192 (224)
133 TIGR01452 PGP_euk phosphoglyco 77.2 4.8 0.0001 41.2 5.8 55 122-193 3-57 (279)
134 TIGR01456 CECR5 HAD-superfamil 77.1 3.2 6.8E-05 43.6 4.6 53 122-191 1-57 (321)
135 TIGR02726 phenyl_P_delta pheny 75.7 3 6.4E-05 40.1 3.6 111 121-248 7-121 (169)
136 TIGR02253 CTE7 HAD superfamily 75.3 1.9 4.1E-05 41.7 2.2 77 306-391 97-177 (221)
137 TIGR01993 Pyr-5-nucltdase pyri 75.3 1.4 3E-05 41.6 1.3 78 306-394 87-171 (184)
138 KOG2914|consensus 75.2 2.7 5.9E-05 42.3 3.3 85 145-238 91-182 (222)
139 TIGR01428 HAD_type_II 2-haloal 74.5 2.4 5.2E-05 40.5 2.6 80 306-394 95-178 (198)
140 TIGR01454 AHBA_synth_RP 3-amin 74.2 2.2 4.8E-05 41.0 2.3 90 306-404 78-171 (205)
141 PLN02811 hydrolase 73.2 3 6.6E-05 40.8 3.1 94 145-247 77-179 (220)
142 PRK10187 trehalose-6-phosphate 72.8 4.9 0.00011 41.1 4.6 63 119-191 12-74 (266)
143 PRK13288 pyrophosphatase PpaX; 72.3 3.4 7.3E-05 40.0 3.1 90 306-404 85-178 (214)
144 TIGR01509 HAD-SF-IA-v3 haloaci 71.7 3.4 7.4E-05 38.2 2.9 79 306-394 88-170 (183)
145 KOG3120|consensus 71.4 4.1 8.8E-05 41.2 3.4 87 118-212 10-142 (256)
146 TIGR01485 SPP_plant-cyano sucr 70.6 5.3 0.00011 39.9 4.2 60 121-193 1-60 (249)
147 TIGR01457 HAD-SF-IIA-hyp2 HAD- 70.2 8.6 0.00019 38.7 5.6 53 123-192 3-55 (249)
148 TIGR01490 HAD-SF-IB-hyp1 HAD-s 70.1 7.8 0.00017 36.9 5.1 84 146-238 87-184 (202)
149 COG0546 Gph Predicted phosphat 70.0 8.7 0.00019 37.8 5.5 93 146-247 89-184 (220)
150 PF13419 HAD_2: Haloacid dehal 69.2 1.9 4.1E-05 39.0 0.6 80 306-394 80-163 (176)
151 TIGR01493 HAD-SF-IA-v2 Haloaci 68.5 2.4 5.1E-05 39.5 1.1 76 145-236 89-167 (175)
152 PTZ00174 phosphomannomutase; P 68.0 5.8 0.00013 39.8 3.9 52 121-188 5-56 (247)
153 PLN02887 hydrolase family prot 67.1 9.2 0.0002 43.8 5.6 59 119-193 306-364 (580)
154 PRK09449 dUMP phosphatase; Pro 66.5 2.8 6.1E-05 40.7 1.2 78 306-392 98-179 (224)
155 PRK09456 ?-D-glucose-1-phospha 65.2 4.6 0.0001 38.8 2.4 94 306-407 87-184 (199)
156 cd01427 HAD_like Haloacid deha 65.0 8.4 0.00018 32.8 3.8 48 487-543 1-49 (139)
157 TIGR00338 serB phosphoserine p 64.8 4.6 9.9E-05 39.1 2.3 90 306-404 88-191 (219)
158 TIGR01675 plant-AP plant acid 64.6 7.5 0.00016 39.4 3.9 67 119-193 75-159 (229)
159 PLN02770 haloacid dehalogenase 63.0 2.4 5.3E-05 42.5 0.0 91 306-405 111-205 (248)
160 TIGR01511 ATPase-IB1_Cu copper 62.1 15 0.00032 41.8 6.1 98 120-240 384-481 (562)
161 TIGR01449 PGP_bact 2-phosphogl 62.1 4.1 8.8E-05 39.1 1.4 90 306-404 88-181 (213)
162 TIGR01662 HAD-SF-IIIA HAD-supe 61.0 11 0.00024 33.5 3.9 49 487-544 2-51 (132)
163 PF08235 LNS2: LNS2 (Lipin/Ned 60.7 13 0.00028 35.7 4.4 60 124-192 2-65 (157)
164 TIGR01460 HAD-SF-IIA Haloacid 60.1 11 0.00024 37.6 4.1 51 124-191 1-51 (236)
165 PF03767 Acid_phosphat_B: HAD 59.1 8.2 0.00018 38.8 3.0 65 119-192 70-153 (229)
166 COG0647 NagD Predicted sugar p 58.7 16 0.00035 37.9 5.1 56 121-193 8-63 (269)
167 PRK11590 hypothetical protein; 58.0 5.5 0.00012 38.9 1.5 35 306-348 98-134 (211)
168 PLN02575 haloacid dehalogenase 56.9 11 0.00023 41.1 3.6 89 306-403 219-311 (381)
169 PF06941 NT5C: 5' nucleotidase 56.2 8.2 0.00018 37.1 2.4 79 145-246 72-156 (191)
170 PLN03243 haloacid dehalogenase 55.5 3.3 7.1E-05 42.3 -0.5 91 306-405 112-206 (260)
171 PF08645 PNK3P: Polynucleotide 55.2 17 0.00036 34.5 4.2 49 488-545 3-56 (159)
172 COG1877 OtsB Trehalose-6-phosp 55.0 21 0.00045 37.0 5.2 60 118-189 15-76 (266)
173 COG4502 5'(3')-deoxyribonucleo 54.7 8.7 0.00019 36.4 2.1 27 145-180 67-93 (180)
174 PRK13225 phosphoglycolate phos 53.8 17 0.00038 37.3 4.4 89 306-403 145-234 (273)
175 PHA02597 30.2 hypothetical pro 53.8 7.5 0.00016 37.1 1.7 92 306-407 77-173 (197)
176 COG3700 AphA Acid phosphatase 53.5 14 0.0003 36.4 3.4 77 118-207 60-142 (237)
177 PHA02530 pseT polynucleotide k 53.2 2.6 5.7E-05 43.1 -1.7 88 309-404 193-292 (300)
178 PRK13222 phosphoglycolate phos 52.0 9.3 0.0002 36.8 2.0 88 306-402 96-187 (226)
179 PLN02940 riboflavin kinase 51.7 18 0.0004 39.0 4.4 89 306-403 96-189 (382)
180 PRK10826 2-deoxyglucose-6-phos 50.7 5.4 0.00012 38.9 0.1 90 307-405 96-189 (222)
181 PLN02423 phosphomannomutase 50.4 18 0.00038 36.5 3.8 54 120-193 6-59 (245)
182 TIGR01681 HAD-SF-IIIC HAD-supe 49.8 5.1 0.00011 36.2 -0.2 68 317-393 44-120 (128)
183 PLN02151 trehalose-phosphatase 49.6 16 0.00036 39.3 3.6 58 119-188 96-153 (354)
184 COG1011 Predicted hydrolase (H 49.6 15 0.00033 35.4 3.1 80 306-394 102-184 (229)
185 PRK10748 flavin mononucleotide 49.4 18 0.00039 36.0 3.6 75 146-235 113-190 (238)
186 PRK13223 phosphoglycolate phos 48.8 11 0.00024 38.5 2.0 89 306-403 104-196 (272)
187 TIGR01491 HAD-SF-IB-PSPlk HAD- 47.9 40 0.00087 31.7 5.7 79 306-393 83-175 (201)
188 PF00702 Hydrolase: haloacid d 47.3 34 0.00073 32.3 5.1 97 124-236 110-206 (215)
189 PLN03017 trehalose-phosphatase 46.5 20 0.00044 38.8 3.7 53 119-187 109-165 (366)
190 PRK10563 6-phosphogluconate ph 45.9 26 0.00056 34.0 4.1 89 306-405 91-183 (221)
191 COG3769 Predicted hydrolase (H 45.3 43 0.00094 34.2 5.5 57 120-193 6-62 (274)
192 PRK13226 phosphoglycolate phos 44.7 12 0.00026 36.9 1.6 88 307-403 99-190 (229)
193 TIGR02252 DREG-2 REG-2-like, H 43.9 13 0.00029 35.4 1.7 76 306-391 108-187 (203)
194 PF05116 S6PP: Sucrose-6F-phos 42.5 15 0.00033 37.1 1.9 55 120-191 1-56 (247)
195 COG3882 FkbH Predicted enzyme 42.5 14 0.0003 41.4 1.7 149 118-278 219-381 (574)
196 TIGR01548 HAD-SF-IA-hyp1 haloa 42.4 14 0.00031 35.3 1.6 74 310-392 113-189 (197)
197 TIGR02009 PGMB-YQAB-SF beta-ph 42.4 6 0.00013 36.9 -1.0 86 306-402 91-180 (185)
198 TIGR01489 DKMTPPase-SF 2,3-dik 41.0 48 0.001 30.7 4.9 81 306-395 75-176 (188)
199 TIGR01422 phosphonatase phosph 40.6 15 0.00033 36.6 1.5 91 306-404 102-197 (253)
200 TIGR01493 HAD-SF-IA-v2 Haloaci 39.7 11 0.00024 35.0 0.4 72 306-392 93-167 (175)
201 PRK10748 flavin mononucleotide 39.0 14 0.0003 36.7 1.0 72 306-391 116-190 (238)
202 COG0546 Gph Predicted phosphat 38.7 17 0.00038 35.7 1.6 78 317-403 104-184 (220)
203 COG4359 Uncharacterized conser 37.4 71 0.0015 31.8 5.5 41 145-193 72-112 (220)
204 TIGR01680 Veg_Stor_Prot vegeta 37.1 48 0.001 34.6 4.6 66 120-193 100-184 (275)
205 TIGR00685 T6PP trehalose-phosp 36.5 25 0.00054 35.2 2.4 38 120-160 2-39 (244)
206 PRK14988 GMP/IMP nucleotidase; 35.7 15 0.00032 36.3 0.6 88 307-403 97-188 (224)
207 TIGR01656 Histidinol-ppas hist 34.6 53 0.0011 30.1 4.0 50 487-544 2-53 (147)
208 TIGR01549 HAD-SF-IA-v1 haloaci 33.3 22 0.00048 32.2 1.3 75 307-392 68-145 (154)
209 PRK13478 phosphonoacetaldehyde 32.9 31 0.00068 34.7 2.4 90 306-403 104-198 (267)
210 TIGR01990 bPGM beta-phosphoglu 32.5 11 0.00024 35.0 -0.8 86 306-402 90-179 (185)
211 COG0637 Predicted phosphatase/ 32.4 45 0.00098 33.0 3.4 81 306-395 89-173 (221)
212 PRK13582 thrH phosphoserine ph 31.9 43 0.00092 31.9 3.1 91 305-404 70-167 (205)
213 PRK09552 mtnX 2-hydroxy-3-keto 31.1 68 0.0015 31.3 4.4 89 306-403 77-182 (219)
214 TIGR03351 PhnX-like phosphonat 31.0 22 0.00048 34.3 0.9 89 307-403 91-185 (220)
215 TIGR01525 ATPase-IB_hvy heavy 30.8 81 0.0018 35.7 5.5 98 121-240 364-462 (556)
216 PLN02779 haloacid dehalogenase 30.8 15 0.00033 37.9 -0.3 90 306-404 147-242 (286)
217 PHA01732 proline-rich protein 30.5 1.3E+02 0.0028 26.2 5.3 7 41-47 48-54 (94)
218 TIGR02247 HAD-1A3-hyp Epoxide 30.0 16 0.00034 35.2 -0.3 90 306-404 97-192 (211)
219 TIGR02137 HSK-PSP phosphoserin 29.6 1.1E+02 0.0023 30.1 5.4 57 293-358 58-114 (203)
220 TIGR01545 YfhB_g-proteo haloac 29.3 1.2E+02 0.0027 29.7 5.9 49 146-203 94-146 (210)
221 PRK11587 putative phosphatase; 29.1 38 0.00083 32.9 2.2 88 306-403 86-177 (218)
222 PRK14501 putative bifunctional 28.9 60 0.0013 38.0 4.2 63 119-191 490-552 (726)
223 cd06537 CIDE_N_B CIDE_N domain 28.1 1.1E+02 0.0023 26.4 4.4 15 121-135 39-53 (81)
224 PLN02580 trehalose-phosphatase 27.7 68 0.0015 35.0 4.0 59 119-189 117-175 (384)
225 PRK11590 hypothetical protein; 27.6 1.4E+02 0.0031 28.9 6.0 49 146-202 95-146 (211)
226 cd06539 CIDE_N_A CIDE_N domain 27.4 1.1E+02 0.0024 26.1 4.3 15 121-135 40-54 (78)
227 TIGR01512 ATPase-IB2_Cd heavy 26.9 1.1E+02 0.0023 34.7 5.5 79 145-240 361-440 (536)
228 PF04375 HemX: HemX; InterPro 26.8 50 0.0011 35.7 2.8 26 277-302 302-328 (372)
229 COG4502 5'(3')-deoxyribonucleo 26.5 71 0.0015 30.5 3.4 28 302-329 67-94 (180)
230 PLN02382 probable sucrose-phos 25.9 37 0.0008 37.2 1.6 17 119-135 7-23 (413)
231 TIGR01672 AphA HAD superfamily 25.8 91 0.002 31.6 4.3 53 483-543 61-139 (237)
232 PLN03063 alpha,alpha-trehalose 25.7 83 0.0018 37.5 4.6 64 120-190 506-569 (797)
233 PF05822 UMPH-1: Pyrimidine 5' 25.7 52 0.0011 33.8 2.6 98 144-249 88-208 (246)
234 TIGR01685 MDP-1 magnesium-depe 25.6 20 0.00043 34.7 -0.5 81 317-407 60-156 (174)
235 TIGR01490 HAD-SF-IB-hyp1 HAD-s 24.7 1.5E+02 0.0033 27.9 5.5 43 307-358 91-134 (202)
236 cd06536 CIDE_N_ICAD CIDE_N dom 24.0 1.4E+02 0.0031 25.6 4.4 16 120-135 41-56 (80)
237 TIGR02471 sucr_syn_bact_C sucr 23.4 31 0.00068 34.0 0.5 53 123-193 1-53 (236)
238 cd06538 CIDE_N_FSP27 CIDE_N do 23.2 1.4E+02 0.003 25.6 4.2 15 121-135 39-53 (79)
239 TIGR01545 YfhB_g-proteo haloac 23.0 43 0.00093 33.0 1.3 33 306-346 97-131 (210)
240 smart00266 CAD Domains present 22.6 1.5E+02 0.0034 25.0 4.3 15 121-135 38-52 (74)
241 PLN02919 haloacid dehalogenase 22.3 53 0.0012 40.4 2.2 89 306-402 164-256 (1057)
242 PF12710 HAD: haloacid dehalog 22.2 69 0.0015 29.7 2.5 46 149-202 92-138 (192)
243 TIGR03333 salvage_mtnX 2-hydro 21.9 1.5E+02 0.0032 28.9 4.8 37 306-350 73-110 (214)
244 cd01615 CIDE_N CIDE_N domain, 21.1 1.7E+02 0.0037 24.9 4.4 15 121-135 40-54 (78)
245 TIGR01668 YqeG_hyp_ppase HAD s 20.7 48 0.001 31.3 1.1 59 319-392 60-119 (170)
No 1
>KOG2832|consensus
Probab=100.00 E-value=5.6e-65 Score=519.78 Aligned_cols=258 Identities=48% Similarity=0.855 Sum_probs=242.5
Q ss_pred HHHHHHHhhhhHHHHHHhhhccceE-Ee--------ecCcccccccCCchhHHHHHHHHHHHhhhhhhhccCCCCCCCCC
Q psy17690 40 AKREAQWRSMKLGFTVIGASTGALL-AY--------FNGNIIHDEFMDLPIVQQYSKRIWKQMVTYNKMIVEPSREKLLP 110 (545)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~g~~~~d~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~lLP 110 (545)
++..+.+|+++..|.+|+++++.+. +| +.| .|.|+|++ .+.+++.|+|+.++.|..++.||.+++|||
T Consensus 102 ~e~~~~~rr~~~~f~~~~~s~~s~~a~y~~g~~~~de~G-~i~ddfs~--~l~~~~~R~~~~~~~~~~~~~EP~~~~LLP 178 (393)
T KOG2832|consen 102 NELRRAFRRMKLKFPVFGGSAVSISAIYLTGEPSRDEKG-KIIDDFSN--YLVQYLRRVWKIFNSYERMFKEPDRAKLLP 178 (393)
T ss_pred hhhhHHHHhhhcceeeecccceeEEEEEEecCCccccCC-CcchhHHH--HHHHHHHHHHHHHHhHHHHhcCCchhhhCC
Confidence 5677788889988888777554443 45 444 77788887 779999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHH
Q psy17690 111 DPVPFPYYQPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEA 190 (545)
Q Consensus 111 ~p~~~p~~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~ 190 (545)
+|+++||.|+++||||||+++|||++|++++||+++||||+|.||.++++ +|||||||+++++||.++++.
T Consensus 179 dpl~pPy~Qp~yTLVleledvLVhpdws~~tGwRf~kRPgvD~FL~~~a~---------~yEIVi~sse~gmt~~pl~d~ 249 (393)
T KOG2832|consen 179 DPLPPPYEQPPYTLVLELEDVLVHPDWSYKTGWRFKKRPGVDYFLGHLAK---------YYEIVVYSSEQGMTVFPLLDA 249 (393)
T ss_pred CCCCCcccCCCceEEEEeeeeEeccchhhhcCceeccCchHHHHHHhhcc---------cceEEEEecCCccchhhhHhh
Confidence 99999999999999999999999999999999999999999999999997 999999999999999999999
Q ss_pred hcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccCCCCCCCcchHHHHHHHHHHH
Q psy17690 191 LDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLAVFLRTI 270 (545)
Q Consensus 191 LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g~~~D~eL~~L~~~L~~l 270 (545)
||| +++|+|+|||++|.+.+|+|+|||++||||++|||+||.++.++.+||+|+|++++|.|+++|+.|++|++||+.|
T Consensus 250 lDP-~g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~i 328 (393)
T KOG2832|consen 250 LDP-KGYISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEYI 328 (393)
T ss_pred cCC-cceEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHHH
Confidence 999 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCchHHHHHHhhcCCCChHHHHHHHHHHHHhhhhHHH
Q psy17690 271 AVNGVDDVREVMLYYSQFDDPIEAFNQNQIKLRSIAPILE 310 (545)
Q Consensus 271 a~~~~~DVR~vL~~y~~~~~~~~~fre~Q~kLqeQ~e~~E 310 (545)
|+++++|||+||++|.+++|+.++|+++|++++||+.+.+
T Consensus 329 a~~~~eDvR~vL~~y~~~~D~~~~F~~rqk~l~eq~~~~~ 368 (393)
T KOG2832|consen 329 AQQQVEDVRPVLQSYSQEKDPAKEFRDRQKKLQEQQYESE 368 (393)
T ss_pred HHccHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998875544
No 2
>KOG1605|consensus
Probab=100.00 E-value=1.9e-42 Score=347.54 Aligned_cols=167 Identities=34% Similarity=0.530 Sum_probs=151.8
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCeeEeec--cccC---------------cceeeeeCCChhHHHHhhcCCCCCCCCC
Q psy17690 106 EKLLPDPVPFPYYQPPYTLLLEFRDLLVHPE--WTYN---------------TGWRFKKRPFVDDFFETLNGSTTDRNNV 168 (545)
Q Consensus 106 ~~lLP~p~~~p~~~~k~tLVLDLDeTLvhs~--~~~~---------------~g~~~~kRPgld~FL~~ls~~~~~~~~~ 168 (545)
.+++|.-+ ...+|+||||||||||||+. +... +-++|.+|||+++||..+++
T Consensus 77 ~~~~~~~~---~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~-------- 145 (262)
T KOG1605|consen 77 SPVLPLRL---ATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSK-------- 145 (262)
T ss_pred cccCCccc---ccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHH--------
Confidence 34445433 36789999999999999998 3321 12578999999999999998
Q ss_pred CceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 169 PLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 169 ~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
+||+|||||+...||.+|++.||+.++.|.+|+||++|.+.+|.|+|||+.+||||++||||||+|.+|.+||+|||+|
T Consensus 146 -~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 146 -WYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPI 224 (262)
T ss_pred -HHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcchHHHHHHHHHHHHhcCCchHHHHHHhhc
Q psy17690 249 PRWNGNDDDRTLVDLAVFLRTIAVNGVDDVREVMLYYS 286 (545)
Q Consensus 249 ~~~~g~~~D~eL~~L~~~L~~la~~~~~DVR~vL~~y~ 286 (545)
++|+.++.|+||++|+|||+.|+. ++|||++|+...
T Consensus 225 ~sw~~d~~D~eLL~LlpfLe~L~~--~~Dvr~~l~~~~ 260 (262)
T KOG1605|consen 225 KSWFDDPTDTELLKLLPFLEALAF--VDDVRPILARRF 260 (262)
T ss_pred cccccCCChHHHHHHHHHHHHhcc--cccHHHHHHHhh
Confidence 999999999999999999999984 699999998643
No 3
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=3.9e-37 Score=290.31 Aligned_cols=146 Identities=36% Similarity=0.569 Sum_probs=137.1
Q ss_pred CeEEEEeCCCeeEeeccccCc----------------ceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcH
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNT----------------GWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSI 184 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~----------------g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya 184 (545)
|+||||||||||||+.+.... +|++++|||+++||+.|++ .|||+||||+++.||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~---------~yei~I~Ts~~~~yA 71 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK---------WYELVIFTASLEEYA 71 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh---------cCEEEEEcCCcHHHH
Confidence 579999999999999876532 5789999999999999997 899999999999999
Q ss_pred HHHHHHhcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccCCCCCCCcchHHHHH
Q psy17690 185 APILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLA 264 (545)
Q Consensus 185 ~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g~~~D~eL~~L~ 264 (545)
++|++.|||.+.+|.+++||++|....|.++|||+.+||++++||||||++.++..||+|||+|.+|.|+.+|++|.+|+
T Consensus 72 ~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~ 151 (162)
T TIGR02251 72 DPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLI 151 (162)
T ss_pred HHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHH
Confidence 99999999966799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCch
Q psy17690 265 VFLRTIAVNGVDD 277 (545)
Q Consensus 265 ~~L~~la~~~~~D 277 (545)
+||+.|+ .++|
T Consensus 152 ~~L~~l~--~~~~ 162 (162)
T TIGR02251 152 PFLEGLR--FEDD 162 (162)
T ss_pred HHHHHHh--ccCC
Confidence 9999997 3554
No 4
>KOG2832|consensus
Probab=100.00 E-value=2.6e-37 Score=316.77 Aligned_cols=114 Identities=54% Similarity=1.086 Sum_probs=110.9
Q ss_pred hhhhcCCCCCCCCCccccCcCcChhHHHHHHHHHHHHHHHhhhhccCCCccCCCCCCCCCCCCCCCeeEEEecccccccc
Q psy17690 420 AVFLRSPPQKDENGNIIHDEFMDLPIVQQYSKRIWKQMVTYNKMIVEPSREKLLPDPVPFPYYQPPYTLLLEFRDLLVHP 499 (545)
Q Consensus 420 ~pfL~~L~~~DDvr~vI~deFs~~p~~~Qy~~R~~k~~~~y~K~~~~p~~~~llp~~~~~~~~~~~~~l~~~~~~~l~~~ 499 (545)
+.|+.+.+..|..| .|.|+|++ .+.||++|+|+.+++|++||+||.+++|||||+++||+||||||||||+|+||||
T Consensus 127 a~y~~g~~~~de~G-~i~ddfs~--~l~~~~~R~~~~~~~~~~~~~EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhp 203 (393)
T KOG2832|consen 127 AIYLTGEPSRDEKG-KIIDDFSN--YLVQYLRRVWKIFNSYERMFKEPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHP 203 (393)
T ss_pred EEEEecCCccccCC-CcchhHHH--HHHHHHHHHHHHHHhHHHHhcCCchhhhCCCCCCCcccCCCceEEEEeeeeEecc
Confidence 47888999999999 89999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCcHHHHHHHhcCCCCCCCCCCceEEEEEeccCC
Q psy17690 500 EWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG 545 (545)
Q Consensus 500 ~~~~~~~~~~~krp~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 545 (545)
+|+|+|||||+||||||+||++|+ ++|||||||||+|
T Consensus 204 dws~~tGwRf~kRPgvD~FL~~~a---------~~yEIVi~sse~g 240 (393)
T KOG2832|consen 204 DWSYKTGWRFKKRPGVDYFLGHLA---------KYYEIVVYSSEQG 240 (393)
T ss_pred chhhhcCceeccCchHHHHHHhhc---------ccceEEEEecCCc
Confidence 999999999999999999999997 8999999999998
No 5
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=2.1e-36 Score=281.74 Aligned_cols=147 Identities=38% Similarity=0.597 Sum_probs=124.5
Q ss_pred eEEEEeCCCeeEeecccc-----------CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHH
Q psy17690 122 YTLLLEFRDLLVHPEWTY-----------NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEA 190 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~-----------~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~ 190 (545)
+||||||||||||+.... ..++.+++|||+++||+.+++ +|||+|||++++.||++|++.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~---------~~ev~i~T~~~~~ya~~v~~~ 71 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK---------HYEVVIWTSASEEYAEPVLDA 71 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH---------HCEEEEE-SS-HHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH---------hceEEEEEeehhhhhhHHHHh
Confidence 699999999999997764 246889999999999999997 999999999999999999999
Q ss_pred hcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccCCCCC-CCcchHHHHHHHHHH
Q psy17690 191 LDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGN-DDDRTLVDLAVFLRT 269 (545)
Q Consensus 191 LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g~-~~D~eL~~L~~~L~~ 269 (545)
|||++.+|.+++||++|....|.++|||+++||++++||||||++.++..||+|+|.|++|.++ .+|++|..|++||+.
T Consensus 72 ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~ 151 (159)
T PF03031_consen 72 LDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEE 151 (159)
T ss_dssp HTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHH
T ss_pred hhhhccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHH
Confidence 9998889999999999999888889999999999999999999999999999999999999999 999999999999999
Q ss_pred HHhcCCchHH
Q psy17690 270 IAVNGVDDVR 279 (545)
Q Consensus 270 la~~~~~DVR 279 (545)
|+ +.+|||
T Consensus 152 l~--~~~Dvr 159 (159)
T PF03031_consen 152 LA--KEDDVR 159 (159)
T ss_dssp HH--THS-CH
T ss_pred hC--cccCCC
Confidence 98 469998
No 6
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=5.5e-36 Score=290.41 Aligned_cols=155 Identities=23% Similarity=0.291 Sum_probs=133.7
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC-Cce
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE-NKY 197 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~-~~~ 197 (545)
++|+||||||||||||+.+...+++ +.+||||++||+.+++ +|||+||||+++.||+++++.|++. +..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~-~~kRP~l~eFL~~~~~---------~feIvVwTAa~~~ya~~~l~~l~~~~~~~ 88 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGE-ELMRPYLHEFLTSAYE---------DYDIVIWSATSMKWIEIKMTELGVLTNPN 88 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCce-EEeCCCHHHHHHHHHh---------CCEEEEEecCCHHHHHHHHHHhcccCCcc
Confidence 6799999999999999866566554 6999999999999997 9999999999999999999999752 223
Q ss_pred eeEEEecCccc------eecCc-ccccccccC------cCCCcEEEEeCCCcccccCCCccccccCCCC----CCCcchH
Q psy17690 198 FYFKLFRDSTE------FVDGH-HVKNLDLLN------RDLKKVIAVDWNTHSLSKNRENALIIPRWNG----NDDDRTL 260 (545)
Q Consensus 198 i~~rl~R~~c~------~~~g~-~vKdL~~L~------Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g----~~~D~eL 260 (545)
+..++++++|. ...|. ++|||+.++ +|+++||||||++.++.+||+|||+|++|.+ +.+|+||
T Consensus 89 ~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~~D~eL 168 (195)
T TIGR02245 89 YKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRGTDQEL 168 (195)
T ss_pred ceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCcccHHH
Confidence 45566668883 23454 599999883 3889999999999999999999999999985 5789999
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHhh
Q psy17690 261 VDLAVFLRTIAVNGVDDVREVMLYY 285 (545)
Q Consensus 261 ~~L~~~L~~la~~~~~DVR~vL~~y 285 (545)
++|++||+.|| .++|||+++++.
T Consensus 169 ~~L~~yL~~la--~~~Dvr~~~~~~ 191 (195)
T TIGR02245 169 LKLTQYLKTIA--ELEDFSSLDHKE 191 (195)
T ss_pred HHHHHHHHHHh--cCcccchhhhcc
Confidence 99999999998 499999999854
No 7
>KOG1605|consensus
Probab=99.97 E-value=1.5e-33 Score=283.44 Aligned_cols=132 Identities=33% Similarity=0.498 Sum_probs=126.3
Q ss_pred HHhhhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccC
Q psy17690 302 LRSIAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDL 381 (545)
Q Consensus 302 LqeQ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL 381 (545)
...++...|||++++++|++++||||++ .||++|+|.||+.+++|.|||||+||+..+|.|+|||+.+||||
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~--------~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL 201 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLE--------VYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDL 201 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhH--------HHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCc
Confidence 4556789999999999999999999999 99999999999977999999999999999999999999999999
Q ss_pred CcEEEEeCCCcccccCCCCeeeccCCCCCCCChhhhhhhhhhcCCCCCCCCCccccCcCc
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLAVFLRSPPQKDENGNIIHDEFM 441 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~~w~gd~~D~eLl~L~pfL~~L~~~DDvr~vI~deFs 441 (545)
++||||||+|.+|.+||+|||||++|++|..|+||++|+|||++++..+|||.++.+.|.
T Consensus 202 ~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~LlpfLe~L~~~~Dvr~~l~~~~~ 261 (262)
T KOG1605|consen 202 SKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLLPFLEALAFVDDVRPILARRFG 261 (262)
T ss_pred ccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHHHHHHHhcccccHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999877664
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.96 E-value=5.9e-30 Score=268.92 Aligned_cols=281 Identities=21% Similarity=0.307 Sum_probs=221.2
Q ss_pred CCCeEEEEeCCCeeEeecccc-------------------------CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEE
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTY-------------------------NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEV 173 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~-------------------------~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEi 173 (545)
+++..||+|+|.|.+|+...+ ...+++++||++..|+...+. .||+
T Consensus 24 ~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~---------~~e~ 94 (390)
T COG5190 24 DKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISP---------LYEL 94 (390)
T ss_pred CcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhch---------hcce
Confidence 457789999999999996655 234678999999999999995 9999
Q ss_pred EEEcCCChhcHHHHHHHhcCCCceeeEEEe----------------------------------------------cCcc
Q psy17690 174 VIFTSESGLSIAPILEALDKENKYFYFKLF----------------------------------------------RDST 207 (545)
Q Consensus 174 vIfTa~~~~ya~~il~~LDp~~~~i~~rl~----------------------------------------------R~~c 207 (545)
.++|.+...||..+...+||.+..|.-+.. |..|
T Consensus 95 ~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~~~ 174 (390)
T COG5190 95 HIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSPFS 174 (390)
T ss_pred eeEeeccccchhhhhhcccccccccccccccccccccchhhhhhhcCccccccccccccccccCCccchhhhhhcccccc
Confidence 999999999999999999987666544332 2223
Q ss_pred ceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccCCCCCCCcchHHHHHHHHHHHHhcCCchHHHHHHhhcC
Q psy17690 208 EFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLAVFLRTIAVNGVDDVREVMLYYSQ 287 (545)
Q Consensus 208 ~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g~~~D~eL~~L~~~L~~la~~~~~DVR~vL~~y~~ 287 (545)
.+..+.-+.|+..+.+++.+.+..|+.+..+...+.+......|.++.-...+...+..+.-++....+++..
T Consensus 175 ~~~~~~~i~d~~~~~~~~~r~~~~~~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~------- 247 (390)
T COG5190 175 KYESDKDIVDLPRLERKLSREAGIDTLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQH------- 247 (390)
T ss_pred cccccccccCcccccchhhhhcccccccchhhcCCCCccccccCCCccceeeccccccccchhhcccccccee-------
Confidence 3333344666666777777777777777777666666666666666665555544444444333322221110
Q ss_pred CCChHHHHHHHHHHHHhhhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe
Q psy17690 288 FDDPIEAFNQNQIKLRSIAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD 367 (545)
Q Consensus 288 ~~~~~~~fre~Q~kLqeQ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~ 367 (545)
.-..-...++.+|+..++++|++++|||+.+ .||++|++.||+. ++|.+++||++|....
T Consensus 248 -----------~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~--------~y~~~v~d~l~~~-k~~~~~lfr~sc~~~~ 307 (390)
T COG5190 248 -----------LVYVSKRPELDYFLGKLSKIHELVYFTASVK--------RYADPVLDILDSD-KVFSHRLFRESCVSYL 307 (390)
T ss_pred -----------EEEEcCChHHHHHHhhhhhhEEEEEEecchh--------hhcchHHHhcccc-ceeehhhhcccceecc
Confidence 0001222467789999999999999999988 9999999999999 4999999999999999
Q ss_pred CceeeecccccccCCcEEEEeCCCcccccCCCCeeeccCCCCCCCChhhhhhhhhhcCCCC--CCCCCcc
Q psy17690 368 GHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLAVFLRSPPQ--KDENGNI 435 (545)
Q Consensus 368 g~~vKDLs~LgRdL~~vIiIDn~p~s~~~qp~NgI~I~~w~gd~~D~eLl~L~pfL~~L~~--~DDvr~v 435 (545)
|.|+|||+++||++.+||||||+|.+|.+||+|+|+|.+|.+++.|++|++|++|++.++. ..|++.+
T Consensus 308 G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le~L~~~~~~d~~~~ 377 (390)
T COG5190 308 GVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLEDLPDRDLKDVSSI 377 (390)
T ss_pred CchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhcccccccccccchhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999998 5566655
No 9
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.95 E-value=2.2e-28 Score=229.87 Aligned_cols=123 Identities=24% Similarity=0.375 Sum_probs=109.1
Q ss_pred CCCCeEEEEeCCCeeEeeccccC---------------------------cceeeeeCCChhHHHHhhcCCCCCCCCCCc
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYN---------------------------TGWRFKKRPFVDDFFETLNGSTTDRNNVPL 170 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~---------------------------~g~~~~kRPgld~FL~~ls~~~~~~~~~~~ 170 (545)
.++|+|||||||+|||||.+... ....+++|||+++||+.+++ .
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~---------~ 73 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK---------L 73 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh---------h
Confidence 36799999999999999965431 11357899999999999997 8
Q ss_pred eEEEEEcCCChhcHHHHHHHhcCCCceeeEE-EecCccceecCccccccc-ccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 171 FEVVIFTSESGLSIAPILEALDKENKYFYFK-LFRDSTEFVDGHHVKNLD-LLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 171 yEivIfTa~~~~ya~~il~~LDp~~~~i~~r-l~R~~c~~~~g~~vKdL~-~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
||++|||++.+.||++|++.|||.+.+|.+| ++|++|. |.++|||+ .++||+++||||||++.+|..||+|+|+|
T Consensus 74 yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i 150 (156)
T TIGR02250 74 YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQI 150 (156)
T ss_pred cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEe
Confidence 9999999999999999999999966789777 5699996 88999995 45899999999999999999999999999
Q ss_pred cCCC
Q psy17690 249 PRWN 252 (545)
Q Consensus 249 ~~~~ 252 (545)
++|.
T Consensus 151 ~~~~ 154 (156)
T TIGR02250 151 EPYN 154 (156)
T ss_pred CCcc
Confidence 9995
No 10
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.94 E-value=6.6e-28 Score=253.48 Aligned_cols=167 Identities=30% Similarity=0.469 Sum_probs=151.6
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCeeEeeccc---------------cCcceeeeeCCChhHHHHhhcCCCCCCCCCCc
Q psy17690 106 EKLLPDPVPFPYYQPPYTLLLEFRDLLVHPEWT---------------YNTGWRFKKRPFVDDFFETLNGSTTDRNNVPL 170 (545)
Q Consensus 106 ~~lLP~p~~~p~~~~k~tLVLDLDeTLvhs~~~---------------~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~ 170 (545)
.+|+|..... ..+++||++|||+||+|+.+. .+++|++.+||+|++|+..+++ +
T Consensus 199 ~~l~~~~~~~--~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~---------~ 267 (390)
T COG5190 199 DTLEPPVSKS--TSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSK---------I 267 (390)
T ss_pred ccccchhhcC--CCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhh---------h
Confidence 3444444332 257899999999999998543 2356889999999999999998 9
Q ss_pred eEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccC
Q psy17690 171 FEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPR 250 (545)
Q Consensus 171 yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~ 250 (545)
||+++||++.+.||++|++.||+ .+.|++++||++|....|.|+|||+.++|++++|||||++|.+|.+||+|+|+|++
T Consensus 268 ~~l~~ft~s~~~y~~~v~d~l~~-~k~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~ 346 (390)
T COG5190 268 HELVYFTASVKRYADPVLDILDS-DKVFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEK 346 (390)
T ss_pred EEEEEEecchhhhcchHHHhccc-cceeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCc
Confidence 99999999999999999999999 55999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcCCchHHHHHHh
Q psy17690 251 WNGNDDDRTLVDLAVFLRTIAVNGVDDVREVMLY 284 (545)
Q Consensus 251 ~~g~~~D~eL~~L~~~L~~la~~~~~DVR~vL~~ 284 (545)
|.+++.|.+|++|++||+.|...++.||+.+|..
T Consensus 347 W~~d~~d~el~~ll~~le~L~~~~~~d~~~~l~~ 380 (390)
T COG5190 347 WISDEHDDELLNLLPFLEDLPDRDLKDVSSILQS 380 (390)
T ss_pred ccccccchhhhhhcccccccccccchhhhhhhhh
Confidence 9999999999999999999998889999999864
No 11
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.91 E-value=2.9e-25 Score=209.53 Aligned_cols=122 Identities=32% Similarity=0.530 Sum_probs=115.9
Q ss_pred HHhhhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccC
Q psy17690 302 LRSIAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDL 381 (545)
Q Consensus 302 LqeQ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL 381 (545)
...+++..|||+.+++.|+++||||+.+ .||++|+++|||.+.+|++++||++|....|.++|||+.+||++
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~--------~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~ 112 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLE--------EYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDL 112 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcH--------HHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCCh
Confidence 3455788999999999999999999998 99999999999997799999999999999999999999999999
Q ss_pred CcEEEEeCCCcccccCCCCeeeccCCCCCCCChhhhhhhhhhcCCCCCCC
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIPRWNGNDDDRTLVDLAVFLRSPPQKDE 431 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~~w~gd~~D~eLl~L~pfL~~L~~~DD 431 (545)
+++|||||+|.++..||+|||+|.+|.|+.+|++|++|++||+.++..+|
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~~~ 162 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFEDD 162 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999988765
No 12
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=99.91 E-value=5.4e-25 Score=204.98 Aligned_cols=121 Identities=29% Similarity=0.493 Sum_probs=102.9
Q ss_pred hhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccCCcE
Q psy17690 305 IAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKV 384 (545)
Q Consensus 305 Q~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL~~v 384 (545)
+++..+||+.+++.|+++|||+|++ .||.+|++.|||++.+|++++||++|....|.++|||+++||++++|
T Consensus 38 RP~l~~FL~~l~~~~ev~i~T~~~~--------~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~v 109 (159)
T PF03031_consen 38 RPGLDEFLEELSKHYEVVIWTSASE--------EYAEPVLDALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNV 109 (159)
T ss_dssp -TTHHHHHHHHHHHCEEEEE-SS-H--------HHHHHHHHHHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGE
T ss_pred CchHHHHHHHHHHhceEEEEEeehh--------hhhhHHHHhhhhhccccccccccccccccccccccchHHHhhccccE
Confidence 4688899999999999999999998 99999999999987899999999999998898899999999999999
Q ss_pred EEEeCCCcccccCCCCeeeccCCCCC-CCChhhhhhhhhhcCCCCCCCCC
Q psy17690 385 IAVDWNTHSLSKNRENALIIPRWNGN-DDDRTLVDLAVFLRSPPQKDENG 433 (545)
Q Consensus 385 IiIDn~p~s~~~qp~NgI~I~~w~gd-~~D~eLl~L~pfL~~L~~~DDvr 433 (545)
|||||+|.++..|++|+|+|++|.++ .+|++|+.|++||+++...+|||
T Consensus 110 vivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~Dvr 159 (159)
T PF03031_consen 110 VIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKEDDVR 159 (159)
T ss_dssp EEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS-CH
T ss_pred EEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCcccCCC
Confidence 99999999999999999999999999 99999999999999999888886
No 13
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.88 E-value=3.2e-23 Score=201.36 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=113.5
Q ss_pred HhhhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCC-ceeeeEeecCcc------eeEeCc-eeeec
Q psy17690 303 RSIAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKEN-KYFYFKLFRDST------EFVDGH-HVKNL 374 (545)
Q Consensus 303 qeQ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~-~~~~~rLyR~~C------~~~~g~-~vKDL 374 (545)
..++...|||+.++++|+++|||||.+ .||+++++.|++.+ .-+..++++++| +...|. ++|||
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~--------~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL 116 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSM--------KWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPL 116 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCH--------HHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeec
Confidence 355788999999999999999999988 99999999997532 335677788998 334565 49999
Q ss_pred ccc----c--ccCCcEEEEeCCCcccccCCCCeeeccCCCC----CCCChhhhhhhhhhcCCCCCCCCCccccCcCc
Q psy17690 375 DLL----N--RDLKKVIAVDWNTHSLSKNRENALIIPRWNG----NDDDRTLVDLAVFLRSPPQKDENGNIIHDEFM 441 (545)
Q Consensus 375 s~L----g--RdL~~vIiIDn~p~s~~~qp~NgI~I~~w~g----d~~D~eLl~L~pfL~~L~~~DDvr~vI~deFs 441 (545)
+.+ | .|+++||||||+|.+|.+||+|||+|++|.+ +.+|+||++|++||+.++..+|||....+.|.
T Consensus 117 ~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 117 GVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred HHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 987 3 3889999999999999999999999999996 57999999999999999999999999877664
No 14
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.87 E-value=3.2e-22 Score=185.60 Aligned_cols=130 Identities=40% Similarity=0.622 Sum_probs=116.3
Q ss_pred CCeEEEEeCCCeeEeecccc-----C-------------cceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh
Q psy17690 120 PPYTLLLEFRDLLVHPEWTY-----N-------------TGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG 181 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~-----~-------------~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~ 181 (545)
+|++|||||||||||+.-.. + ..+.+..|||+++||+.|.+ .|+++|||++..
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~---------~~~l~I~Ts~~~ 71 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE---------LFELVVFTAGLR 71 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh---------ccEEEEEeCCcH
Confidence 48899999999999984211 1 13557899999999999997 799999999999
Q ss_pred hcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccccCCCCCCCcc
Q psy17690 182 LSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALIIPRWNGNDDDR 258 (545)
Q Consensus 182 ~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~~g~~~D~ 258 (545)
.||+.+++.+++...+|...+++++|....+.+.|+|+++|++.+++|+|||++..+..+++|||.|++|.|+.+|+
T Consensus 72 ~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 72 MYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred HHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99999999999955567889999999987777999999999999999999999999999999999999999999884
No 15
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.71 E-value=6.3e-18 Score=159.08 Aligned_cols=93 Identities=23% Similarity=0.327 Sum_probs=85.9
Q ss_pred hhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeE-eecCcceeEeCceeeec-ccccccCC
Q psy17690 305 IAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFK-LFRDSTEFVDGHHVKNL-DLLNRDLK 382 (545)
Q Consensus 305 Q~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~r-LyR~~C~~~~g~~vKDL-s~LgRdL~ 382 (545)
.++..|||+++++.|++.|||++.+ .||++|++.|||.+.+|.+| ++|++|. |.++||| +++|||++
T Consensus 60 rPgv~efL~~l~~~yel~I~T~~~~--------~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~ 128 (156)
T TIGR02250 60 RPFLHEFLKEASKLYEMHVYTMGTR--------AYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADES 128 (156)
T ss_pred CCCHHHHHHHHHhhcEEEEEeCCcH--------HHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcc
Confidence 3688899999999999999999998 99999999999998899666 6799996 8899999 55699999
Q ss_pred cEEEEeCCCcccccCCCCeeeccCCC
Q psy17690 383 KVIAVDWNTHSLSKNRENALIIPRWN 408 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~NgI~I~~w~ 408 (545)
+||||||+|.+|..||+|||+|++|.
T Consensus 129 ~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 129 MVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 99999999999999999999999995
No 16
>KOG0323|consensus
Probab=99.49 E-value=3.1e-14 Score=157.92 Aligned_cols=119 Identities=27% Similarity=0.402 Sum_probs=101.6
Q ss_pred eEEEEeCCCeeEeeccc-------------------------cC-----cceeeeeCCChhHHHHhhcCCCCCCCCCCce
Q psy17690 122 YTLLLEFRDLLVHPEWT-------------------------YN-----TGWRFKKRPFVDDFFETLNGSTTDRNNVPLF 171 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~-------------------------~~-----~g~~~~kRPgld~FL~~ls~~~~~~~~~~~y 171 (545)
+.||+|||.||+|+... .+ ..+.++.||++++||+++++ .|
T Consensus 147 L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sk---------lf 217 (635)
T KOG0323|consen 147 LHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANK---------LF 217 (635)
T ss_pred ceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHh---------hc
Confidence 69999999999997211 11 12568999999999999997 99
Q ss_pred EEEEEcCCChhcHHHHHHHhcCCCceeeEEEe-cCccceecCcccccccccC-cCCCcEEEEeCCCcccccCCCcccccc
Q psy17690 172 EVVIFTSESGLSIAPILEALDKENKYFYFKLF-RDSTEFVDGHHVKNLDLLN-RDLKKVIAVDWNTHSLSKNRENALIIP 249 (545)
Q Consensus 172 EivIfTa~~~~ya~~il~~LDp~~~~i~~rl~-R~~c~~~~g~~vKdL~~L~-Rdl~kvIivDd~~~s~~~qp~N~I~I~ 249 (545)
|+.|||.|.+.||..|++.|||.+.+|..|++ |+. ..+.-.+||..+. ++-+.||||||+...|..++.|.|.|.
T Consensus 218 emhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~ 294 (635)
T KOG0323|consen 218 EMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIA 294 (635)
T ss_pred eeEEEeccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEee
Confidence 99999999999999999999999999999987 554 2223467888775 788889999999999999999999999
Q ss_pred CCC
Q psy17690 250 RWN 252 (545)
Q Consensus 250 ~~~ 252 (545)
+|.
T Consensus 295 ~y~ 297 (635)
T KOG0323|consen 295 PYP 297 (635)
T ss_pred eee
Confidence 983
No 17
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.41 E-value=2.9e-13 Score=125.70 Aligned_cols=101 Identities=35% Similarity=0.546 Sum_probs=93.7
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccCCcEE
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVI 385 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL~~vI 385 (545)
.++.|||+.+.+.|.+.|+|++.+ .||+.+++++++.+.+|++.+++++|......|.|+|+.+|++++++|
T Consensus 48 pG~~e~L~~L~~~~~l~I~Ts~~~--------~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i 119 (148)
T smart00577 48 PGVDEFLKRASELFELVVFTAGLR--------MYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVI 119 (148)
T ss_pred CCHHHHHHHHHhccEEEEEeCCcH--------HHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEE
Confidence 577888888888999999999988 999999999999756779999999999776679999999999999999
Q ss_pred EEeCCCcccccCCCCeeeccCCCCCCCCh
Q psy17690 386 AVDWNTHSLSKNRENALIIPRWNGNDDDR 414 (545)
Q Consensus 386 iIDn~p~s~~~qp~NgI~I~~w~gd~~D~ 414 (545)
+|||++..+..+++|||.|++|.|+.+|+
T Consensus 120 ~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 120 IIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred EEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99999999999999999999999999984
No 18
>KOG0323|consensus
Probab=98.21 E-value=1.5e-06 Score=97.57 Aligned_cols=92 Identities=23% Similarity=0.263 Sum_probs=78.2
Q ss_pred hhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEe-ecCcceeEeCceeeeccccc-ccCC
Q psy17690 305 IAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKL-FRDSTEFVDGHHVKNLDLLN-RDLK 382 (545)
Q Consensus 305 Q~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rL-yR~~C~~~~g~~vKDLs~Lg-RdL~ 382 (545)
++...|||+++++.|++.|+|.|+. .||..|...|||.|.+|.+|. .|+. ..+.-.+||..++ +.-+
T Consensus 203 RP~~~efL~~~sklfemhVyTmg~R--------~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~s 271 (635)
T KOG0323|consen 203 RPFVHEFLKEANKLFEMHVYTMGTR--------DYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDS 271 (635)
T ss_pred CccHHHHHHHHHhhceeEEEeccch--------HHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCc
Confidence 3577899999999999999999998 999999999999999998665 4544 1223477888774 5667
Q ss_pred cEEEEeCCCcccccCCCCeeeccCC
Q psy17690 383 KVIAVDWNTHSLSKNRENALIIPRW 407 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~NgI~I~~w 407 (545)
.||||||+...|..++.|-|.|.+|
T Consensus 272 mvvIIDDr~dVW~~~~~nLI~i~~y 296 (635)
T KOG0323|consen 272 MVVIIDDRSDVWPDHKRNLIQIAPY 296 (635)
T ss_pred cEEEEeCccccccCCCcceEEeeee
Confidence 7999999999999999999999987
No 19
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.90 E-value=1.2e-05 Score=69.89 Aligned_cols=107 Identities=18% Similarity=0.230 Sum_probs=73.0
Q ss_pred EEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEE
Q psy17690 123 TLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKL 202 (545)
Q Consensus 123 tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl 202 (545)
++|+|+||||+..+-..........+|++.++|+++.+ ..+.|+|.|++...++..+++.+.- ...+...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~--------~g~~i~ivS~~~~~~~~~~~~~~~~-~~~~~~i~ 71 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKE--------KGIKLALATNKSRREVLELLEELGL-DDYFDPVI 71 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHH--------CCCeEEEEeCchHHHHHHHHHHcCC-chhhhhee
Confidence 47999999999874322223346889999999999997 3699999999999999999998754 23344333
Q ss_pred ecCcccee----------------c---CcccccccccCcCCCcEEEEeCCCccc
Q psy17690 203 FRDSTEFV----------------D---GHHVKNLDLLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 203 ~R~~c~~~----------------~---g~~vKdL~~L~Rdl~kvIivDd~~~s~ 238 (545)
..+..... . ..+..-+..++.+.+++++|+|+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~ 126 (139)
T cd01427 72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDI 126 (139)
T ss_pred ccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHH
Confidence 33322211 1 111222334456688999999998544
No 20
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.79 E-value=3.4e-05 Score=69.42 Aligned_cols=105 Identities=20% Similarity=0.146 Sum_probs=71.6
Q ss_pred eEEEEeCCCeeEeeccccCcce-eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC--------hhcHHHHHHHhc
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGW-RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES--------GLSIAPILEALD 192 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~-~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~--------~~ya~~il~~LD 192 (545)
+.|++|+||||++.. ....+| .....|++.++|+.|.+ ..+.++|-|.+. ..++..+++.+.
T Consensus 1 k~~~~D~dgtL~~~~-~~~~~~~~~~~~~~v~~~l~~L~~--------~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~ 71 (132)
T TIGR01662 1 KGVVLDLDGTLTDDV-PYVDDEDERILYPEVPDALAELKE--------AGYKVVIVTNQSGIGRGKFSSGRVARRLEELG 71 (132)
T ss_pred CEEEEeCCCceecCC-CCCCCHHHheeCCCHHHHHHHHHH--------CCCEEEEEECCccccccHHHHHHHHHHHHHCC
Confidence 378999999999641 112222 35778999999999975 379999999998 778888998886
Q ss_pred CCCceeeEEEecCcc-ceecCccccccccc-CcCCCcEEEEeC-CCccc
Q psy17690 193 KENKYFYFKLFRDST-EFVDGHHVKNLDLL-NRDLKKVIAVDW-NTHSL 238 (545)
Q Consensus 193 p~~~~i~~rl~R~~c-~~~~g~~vKdL~~L-~Rdl~kvIivDd-~~~s~ 238 (545)
- ... +..+...+ .-....+.+=++.+ +-+.+++|+|+| +...+
T Consensus 72 l-~~~--~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di 117 (132)
T TIGR01662 72 V-PID--VLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDL 117 (132)
T ss_pred C-CEE--EEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccH
Confidence 5 222 22222211 11123344556677 489999999999 45443
No 21
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.70 E-value=1.7e-05 Score=72.16 Aligned_cols=106 Identities=14% Similarity=0.052 Sum_probs=72.4
Q ss_pred eEEEEeCCCeeEeeccc-cCc-c---eeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCC-ChhcHHHHHHHhcC--
Q psy17690 122 YTLLLEFRDLLVHPEWT-YNT-G---WRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE-SGLSIAPILEALDK-- 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~-~~~-g---~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~-~~~ya~~il~~LDp-- 193 (545)
+.||+|||+||+..... ... + -. ...||+.++|+.+.+ ..+.++|.|++ ...++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~-~~~~gv~e~L~~Lk~--------~g~~l~i~Sn~~~~~~~~~~l~~~~~~~ 71 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLE-VTIKEIRDKLQTLKK--------NGFLLALASYNDDPHVAYELLKIFEDFG 71 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhH-HHHHHHHHHHHHHHH--------CCeEEEEEeCCCCHHHHHHHHHhccccc
Confidence 36899999999977321 000 0 00 357999999999975 37999999999 89999999988752
Q ss_pred ----CCceeeEEEecCccceecCcccccccccC--cCCCcEEEEeCCCcc
Q psy17690 194 ----ENKYFYFKLFRDSTEFVDGHHVKNLDLLN--RDLKKVIAVDWNTHS 237 (545)
Q Consensus 194 ----~~~~i~~rl~R~~c~~~~g~~vKdL~~L~--Rdl~kvIivDd~~~s 237 (545)
-..+|.+....+.. -..-.+.+=+.++| -..+++|+|||++.+
T Consensus 72 ~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 72 IIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred cchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhH
Confidence 12344444433221 11112345556678 899999999999865
No 22
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.42 E-value=0.00019 Score=69.13 Aligned_cols=120 Identities=10% Similarity=0.046 Sum_probs=86.1
Q ss_pred CeEEEEeCCCeeEeecc--------c---c-------CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCC-Ch
Q psy17690 121 PYTLLLEFRDLLVHPEW--------T---Y-------NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE-SG 181 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~--------~---~-------~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~-~~ 181 (545)
+..+|+|||.||..+.. + . ..++.+..+||+.++|+.|.+ ..+.+.|-|++ ..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~--------~G~~l~I~Sn~~~~ 73 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD--------AGTYLATASWNDVP 73 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH--------CCCEEEEEeCCCCh
Confidence 34789999999987631 1 1 134678999999999999986 37999999988 89
Q ss_pred hcHHHHHHHhcCCC---------ceeeEEEecCccceecCcc----ccccccc---CcCCCcEEEEeCCCcccccCCCcc
Q psy17690 182 LSIAPILEALDKEN---------KYFYFKLFRDSTEFVDGHH----VKNLDLL---NRDLKKVIAVDWNTHSLSKNRENA 245 (545)
Q Consensus 182 ~ya~~il~~LDp~~---------~~i~~rl~R~~c~~~~g~~----vKdL~~L---~Rdl~kvIivDd~~~s~~~qp~N~ 245 (545)
.++..+++.++- . .+|...+.-+... .... .+.+... |-+.+++|+|||++..+..=..+|
T Consensus 74 ~~~~~~L~~~~l-~~~~~~~~~~~~Fd~iv~~~~~~--~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aG 150 (174)
T TIGR01685 74 EWAYEILGTFEI-TYAGKTVPMHSLFDDRIEIYKPN--KAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYG 150 (174)
T ss_pred HHHHHHHHhCCc-CCCCCcccHHHhceeeeeccCCc--hHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhC
Confidence 999999999875 3 6677766644321 1111 1222222 367899999999998887766777
Q ss_pred ccccCC
Q psy17690 246 LIIPRW 251 (545)
Q Consensus 246 I~I~~~ 251 (545)
+.+--.
T Consensus 151 i~~i~v 156 (174)
T TIGR01685 151 VTSCYC 156 (174)
T ss_pred CEEEEc
Confidence 665443
No 23
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.37 E-value=0.00022 Score=74.50 Aligned_cols=107 Identities=12% Similarity=0.047 Sum_probs=73.4
Q ss_pred CCeEEEEeCCCeeEeeccccC--cceee-eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHH----hc
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYN--TGWRF-KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEA----LD 192 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~--~g~~~-~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~----LD 192 (545)
.+++||+|||+||..-..... .|..+ ..-|++.++|..+.+ ..+-+.|-|+.....|..+++. +.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~--------~Gi~lai~S~n~~~~a~~~l~~~~~~~~ 73 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK--------QGFLLALASKNDEDDAKKVFERRKDFIL 73 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh--------CCCEEEEEcCCCHHHHHHHHHhCccccC
Confidence 478999999999985421111 12221 245889999999986 4799999999999999999998 55
Q ss_pred CCCceeeEEEecCccceecC-cccccccccCcCCCcEEEEeCCCccc
Q psy17690 193 KENKYFYFKLFRDSTEFVDG-HHVKNLDLLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 193 p~~~~i~~rl~R~~c~~~~g-~~vKdL~~L~Rdl~kvIivDd~~~s~ 238 (545)
. ..+|...... +.... ...+=+..+|-+++.+|+|||++...
T Consensus 74 ~-~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 74 Q-AEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred c-HHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 4 3444443111 11122 22334456788999999999999654
No 24
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.22 E-value=0.00085 Score=69.70 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=63.6
Q ss_pred CCCCeEEEEeCCCeeEeeccccCcceeeeeC-CChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCc
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYNTGWRFKKR-PFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENK 196 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kR-Pgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~ 196 (545)
...+..+|+||||||+..+- .+..| |++.+.|+.|.+ ..+-++|+|++...++..+++.+.- ..
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~------~v~irdp~V~EtL~eLke--------kGikLaIvTNg~Re~v~~~Le~lgL-~~ 189 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE------PVRIRDPFVYDSLDELKE--------RGCVLVLWSYGNREHVVHSLKETKL-EG 189 (303)
T ss_pred eeeccEEEEecCCCccCCCC------ccccCChhHHHHHHHHHH--------CCCEEEEEcCCChHHHHHHHHHcCC-Cc
Confidence 35678999999999997732 36688 999999999997 4799999999999999999999988 67
Q ss_pred eeeEEEecCccce
Q psy17690 197 YFYFKLFRDSTEF 209 (545)
Q Consensus 197 ~i~~rl~R~~c~~ 209 (545)
+|...+..+++..
T Consensus 190 yFDvII~~g~i~~ 202 (303)
T PHA03398 190 YFDIIICGGRKAG 202 (303)
T ss_pred cccEEEECCCccc
Confidence 7776666555543
No 25
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.20 E-value=0.00043 Score=70.91 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhhhhhhhccCCCCCCCCCCCCCCCCCCCCeEEEEeCCCeeEeecc----ccCcceeeeeCCChhHHHHhh
Q psy17690 83 QQYSKRIWKQMVTYNKMIVEPSREKLLPDPVPFPYYQPPYTLLLEFRDLLVHPEW----TYNTGWRFKKRPFVDDFFETL 158 (545)
Q Consensus 83 ~~~~~r~~~~~~~~~~~~~~p~~~~lLP~p~~~p~~~~k~tLVLDLDeTLvhs~~----~~~~g~~~~kRPgld~FL~~l 158 (545)
..-+.++++++..|.. ..+|- -.++...+..+++|+||||....- ...........|++.++|+.+
T Consensus 130 ~~~i~~~~~~~~~~~~--------~~~p~--~~~~~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 199 (300)
T PHA02530 130 EDVLRSMFKQMKEYRG--------LVWPV--YTADPGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY 199 (300)
T ss_pred HHHHHHHHHHHHHhcC--------CCCce--eccCCCCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH
Confidence 3555556666665531 11111 123345568999999999996421 111111246799999999999
Q ss_pred cCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccc-------eecC---cccccccccCc-CCCc
Q psy17690 159 NGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTE-------FVDG---HHVKNLDLLNR-DLKK 227 (545)
Q Consensus 159 s~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~-------~~~g---~~vKdL~~L~R-dl~k 227 (545)
.+ ..+.++|.|+.....+..+++.|...+.+|...+..+.+. -... ...+-|..++. +.+.
T Consensus 200 ~~--------~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~ 271 (300)
T PHA02530 200 KA--------AGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDV 271 (300)
T ss_pred Hh--------CCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceE
Confidence 86 3699999999999999999999988433776665555211 1011 12234555676 6799
Q ss_pred EEEEeCCCcccccCCCccccc
Q psy17690 228 VIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 228 vIivDd~~~s~~~qp~N~I~I 248 (545)
+++|||++.....--.+||..
T Consensus 272 ~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 272 LLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred EEEEcCcHHHHHHHHHhCCeE
Confidence 999999998776666666553
No 26
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.19 E-value=0.00063 Score=70.58 Aligned_cols=74 Identities=15% Similarity=0.279 Sum_probs=60.8
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeC-CChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCce
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKR-PFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKY 197 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kR-Pgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~ 197 (545)
.++..+|+||||||+-.+ -.+..| ||+.+.|++|.+ ..+-++|+|++...++..+++.++- ..+
T Consensus 124 ~~~kvIvFDLDgTLi~~~------~~v~irdPgV~EaL~~Lke--------kGikLaIaTS~~Re~v~~~L~~lGL-d~Y 188 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDE------EPVRIRDPRIYDSLTELKK--------RGCILVLWSYGDRDHVVESMRKVKL-DRY 188 (301)
T ss_pred ccceEEEEecCCCCcCCC------CccccCCHHHHHHHHHHHH--------CCCEEEEEECCCHHHHHHHHHHcCC-Ccc
Confidence 557799999999999763 235688 999999999997 4699999999999999999999988 566
Q ss_pred eeEEEecCcc
Q psy17690 198 FYFKLFRDST 207 (545)
Q Consensus 198 i~~rl~R~~c 207 (545)
|...+..++.
T Consensus 189 FdvIIs~Gdv 198 (301)
T TIGR01684 189 FDIIISGGHK 198 (301)
T ss_pred cCEEEECCcc
Confidence 6665554444
No 27
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.15 E-value=0.0003 Score=68.41 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=74.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.+.+ ..+.++|.|++...++..+++.++- ..+|.+.+..+.+.... ..+.+=+..+
T Consensus 81 ~~~~~g~~~~l~~L~~--------~g~~~~i~S~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~ 151 (214)
T PRK13288 81 VTEYETVYETLKTLKK--------QGYKLGIVTTKMRDTVEMGLKLTGL-DEFFDVVITLDDVEHAKPDPEPVLKALELL 151 (214)
T ss_pred cccCcCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCC-hhceeEEEecCcCCCCCCCcHHHHHHHHHc
Confidence 3467999999999986 3699999999999999999999987 67888888777664322 2345566677
Q ss_pred CcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-+.+++++|+|++.-+..--.+|+.
T Consensus 152 ~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 152 GAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred CCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 88899999999999777665556654
No 28
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.04 E-value=0.00048 Score=62.84 Aligned_cols=85 Identities=20% Similarity=0.233 Sum_probs=68.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
....|++.++|..+.+ ..+.++|.|.+...++..+++.+.- ..+|...+..+.+.... ..+-+=+..+
T Consensus 76 ~~~~~~~~~~L~~l~~--------~~~~~~i~Sn~~~~~~~~~l~~~~~-~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~ 146 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA--------KGIPLVIVSNGSRERIERVLERLGL-DDYFDEIISSDDVGSRKPDPDAYRRALEKL 146 (176)
T ss_dssp EEESTTHHHHHHHHHH--------TTSEEEEEESSEHHHHHHHHHHTTH-GGGCSEEEEGGGSSSSTTSHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhccc--------ccceeEEeecCCccccccccccccc-ccccccccccchhhhhhhHHHHHHHHHHHc
Confidence 6899999999999994 3899999999999999999999977 57788777776554322 2344555667
Q ss_pred CcCCCcEEEEeCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~ 238 (545)
|-+.+++|+|||++..+
T Consensus 147 ~~~p~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 147 GIPPEEILFVGDSPSDV 163 (176)
T ss_dssp TSSGGGEEEEESSHHHH
T ss_pred CCCcceEEEEeCCHHHH
Confidence 88899999999998544
No 29
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.04 E-value=0.0016 Score=60.29 Aligned_cols=106 Identities=22% Similarity=0.213 Sum_probs=68.2
Q ss_pred eEEEEeCCCeeEeeccc-cC-cceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh---------------hcH
Q psy17690 122 YTLLLEFRDLLVHPEWT-YN-TGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG---------------LSI 184 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~-~~-~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~---------------~ya 184 (545)
++|++|+||||+..... +. ....+...||+.++|++|.+ ..|.++|-|+... ..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~--------~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~ 72 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA--------AGYTVVVVTNQSGIGRGYFSAEAFRAPNGRV 72 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH--------CCCEEEEEeCCCcccCCcCCHHHHHHHHHHH
Confidence 37899999999997531 22 22235679999999999986 4799999999874 355
Q ss_pred HHHHHHhcCCCceeeEEEec-----Cc--cce-ecCcccccccccCcCCCcEEEEeCCCccc
Q psy17690 185 APILEALDKENKYFYFKLFR-----DS--TEF-VDGHHVKNLDLLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 185 ~~il~~LDp~~~~i~~rl~R-----~~--c~~-~~g~~vKdL~~L~Rdl~kvIivDd~~~s~ 238 (545)
..+++.++- . +...++. +. |.. ..+.+.+=+..++-+.+++|+|.|+..-+
T Consensus 73 ~~~l~~~~l-~--~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di 131 (147)
T TIGR01656 73 LELLRQLGV-A--VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDL 131 (147)
T ss_pred HHHHHhCCC-c--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence 666666654 1 1111221 11 111 11123334455678999999999986543
No 30
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.89 E-value=0.00091 Score=68.33 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=68.7
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec--C-cccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD--G-HHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~--g-~~vKdL~~L~ 222 (545)
..+||+.++|+.+.. ..+.++|.|++...++..+++.++- ..+|.+.+..+.+.... . .+-+=+.++|
T Consensus 101 ~~~~g~~e~L~~Lk~--------~g~~l~ivTn~~~~~~~~~l~~~~i-~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g 171 (272)
T PRK13223 101 VVYPGVRDTLKWLKK--------QGVEMALITNKPERFVAPLLDQMKI-GRYFRWIIGGDTLPQKKPDPAALLFVMKMAG 171 (272)
T ss_pred ccCCCHHHHHHHHHH--------CCCeEEEEECCcHHHHHHHHHHcCc-HhhCeEEEecCCCCCCCCCcHHHHHHHHHhC
Confidence 458999999999975 3699999999999999999999876 56777766655443211 1 1233445668
Q ss_pred cCCCcEEEEeCCCcccccCCCcccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
-+.+++|+|+|+......--.+|+.
T Consensus 172 ~~~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 172 VPPSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred CChhHEEEECCCHHHHHHHHHCCCe
Confidence 8899999999999777665555653
No 31
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.87 E-value=0.0023 Score=60.86 Aligned_cols=114 Identities=13% Similarity=0.048 Sum_probs=72.7
Q ss_pred eEEEEeCCCeeEe-eccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh----hcH-----------H
Q psy17690 122 YTLLLEFRDLLVH-PEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG----LSI-----------A 185 (545)
Q Consensus 122 ~tLVLDLDeTLvh-s~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~----~ya-----------~ 185 (545)
+.|.||+||||+- ..|. ...-.+..-||+.++|++|.+ ..|.++|.|++.. .++ .
T Consensus 2 ~~~~~D~Dgtl~~~~~~~-~~~~~~~~~pgv~e~L~~Lk~--------~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~ 72 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV-HEIDNFEFIDGVIDALRELKK--------MGYALVLVTNQSGIARGYFTEAQFEQLTEWMD 72 (176)
T ss_pred CEEEEeCCCCEeCCCCCC-CCHHHeEECCCHHHHHHHHHH--------CCCEEEEEeCCccccCCcCCHHHHHHHHHHHH
Confidence 4789999999993 2222 122245677999999999986 4799999999985 233 3
Q ss_pred HHHHHhcCCCceeeEEEecC-----------ccce---ecCcccccccccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 186 PILEALDKENKYFYFKLFRD-----------STEF---VDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 186 ~il~~LDp~~~~i~~rl~R~-----------~c~~---~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
.++..+.- .|...++.. .|.. ..+.+.+=++++|-+.+++|+|+|+......=-.+|+.
T Consensus 73 ~~l~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~ 145 (176)
T TIGR00213 73 WSLAERDV---DLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVK 145 (176)
T ss_pred HHHHHcCC---CccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCc
Confidence 33333322 133333321 2211 12234555677888999999999998766554555553
No 32
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.85 E-value=0.0015 Score=66.60 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=74.5
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
...||+.++|+.|.+ ..+-+.|-|++...++..+++.+.- ..+|...+..+.+.... ..+.+=+.++|
T Consensus 109 ~l~pg~~e~L~~L~~--------~g~~l~I~Tn~~~~~~~~~l~~~gl-~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 109 RLRPGSREFVQALKK--------HEIPIAVASTRPRRYLERAIEAVGM-EGFFSVVLAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred ccCCCHHHHHHHHHH--------CCCEEEEEeCcCHHHHHHHHHHcCC-HhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence 457999999999986 3699999999999999999999876 66888888877764322 23556677889
Q ss_pred cCCCcEEEEeCCCcccccCCCccccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
-+.+++|+|+|+...+..--..|+..
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEE
Confidence 99999999999987766555555543
No 33
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.83 E-value=0.0017 Score=64.36 Aligned_cols=94 Identities=11% Similarity=-0.035 Sum_probs=69.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.|.+ ..+-+.|-|++...++..+++.++- ..+|...+..+.+.... ..+.+-++++
T Consensus 94 ~~~~pg~~~~L~~L~~--------~g~~l~i~Tn~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l 164 (229)
T PRK13226 94 SQLFDGVEGMLQRLEC--------AGCVWGIVTNKPEYLARLILPQLGW-EQRCAVLIGGDTLAERKPHPLPLLVAAERI 164 (229)
T ss_pred CeeCCCHHHHHHHHHH--------CCCeEEEECCCCHHHHHHHHHHcCc-hhcccEEEecCcCCCCCCCHHHHHHHHHHh
Confidence 4568999999999976 3689999999999999999998876 55677666655543211 1245666778
Q ss_pred CcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-+.+++|+|+|+......--..|+.
T Consensus 165 ~~~p~~~l~IGDs~~Di~aA~~aG~~ 190 (229)
T PRK13226 165 GVAPTDCVYVGDDERDILAARAAGMP 190 (229)
T ss_pred CCChhhEEEeCCCHHHHHHHHHCCCc
Confidence 88999999999998765544444444
No 34
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.82 E-value=0.00092 Score=65.03 Aligned_cols=95 Identities=17% Similarity=0.160 Sum_probs=64.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccce---e---------cC
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEF---V---------DG 212 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~---~---------~g 212 (545)
+..+||+.+||+.+.+ ..+.++|-|++...++..+++.+.- ..+|...+.-+...+ . ++
T Consensus 84 ~~~~~g~~~~l~~l~~--------~g~~~~IvS~~~~~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 154 (219)
T TIGR00338 84 LPLTEGAEELVKTLKE--------KGYKVAVISGGFDLFAEHVKDKLGL-DAAFANRLEVEDGKLTGLVEGPIVDASYKG 154 (219)
T ss_pred CCcCCCHHHHHHHHHH--------CCCEEEEECCCcHHHHHHHHHHcCC-CceEeeEEEEECCEEEEEecCcccCCcccH
Confidence 4679999999999986 4799999999999999999999865 345544332111110 0 11
Q ss_pred -cccccccccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 213 -HHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 213 -~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
.+-+=+..++-+.+++|+|+|+......--.-++.|
T Consensus 155 ~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 155 KTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 122233456778899999999987765533444544
No 35
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.74 E-value=0.0018 Score=64.16 Aligned_cols=93 Identities=12% Similarity=0.050 Sum_probs=69.5
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
...||+.++|+.+.+ ..+.+.|-|++...++..+++.+.- ..+|...+..+...... ..+.+=+.++|
T Consensus 93 ~~~~g~~e~L~~Lk~--------~g~~~~i~Tn~~~~~~~~~l~~~~l-~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~ 163 (224)
T PRK14988 93 VLREDTVPFLEALKA--------SGKRRILLTNAHPHNLAVKLEHTGL-DAHLDLLLSTHTFGYPKEDQRLWQAVAEHTG 163 (224)
T ss_pred CcCCCHHHHHHHHHh--------CCCeEEEEeCcCHHHHHHHHHHCCc-HHHCCEEEEeeeCCCCCCCHHHHHHHHHHcC
Confidence 457999999999987 3699999999999999999998765 56777766655433211 12445567788
Q ss_pred cCCCcEEEEeCCCcccccCCCcccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
-+.+++++|+|++..+..=-.+|+.
T Consensus 164 ~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 164 LKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CChHHEEEEcCCHHHHHHHHHcCCe
Confidence 8999999999999776555555553
No 36
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.72 E-value=0.0024 Score=62.06 Aligned_cols=93 Identities=19% Similarity=0.221 Sum_probs=67.2
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec--C-ccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD--G-HHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~--g-~~vKdL~~L 221 (545)
...+||+.+||+.+.+ ..+.++|.|++...++..+++.++- ..+|...+..+.+.... + .+.+=+.++
T Consensus 92 ~~~~~g~~~~l~~l~~--------~g~~~~i~S~~~~~~~~~~l~~~~l-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 92 SRLYPGVKETLAALKA--------AGYPLAVVTNKPTPFVAPLLEALGI-ADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred CccCCCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCC-ccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 4588999999999986 3699999999999999999999876 45666544444332111 1 134455667
Q ss_pred CcCCCcEEEEeCCCcccccCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I 246 (545)
+-+.+++|+|+|+...+..--..|+
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~ 187 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGC 187 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCC
Confidence 8889999999999876655444443
No 37
>PRK11587 putative phosphatase; Provisional
Probab=96.58 E-value=0.0036 Score=61.29 Aligned_cols=92 Identities=12% Similarity=-0.054 Sum_probs=65.1
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
...||+.++|+.|.+ ..+.+.|-|++...++..+++...- ..+...+..+++.... ..+.+-+..+|
T Consensus 83 ~~~pg~~e~L~~L~~--------~g~~~~ivTn~~~~~~~~~l~~~~l--~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g 152 (218)
T PRK11587 83 TALPGAIALLNHLNK--------LGIPWAIVTSGSVPVASARHKAAGL--PAPEVFVTAERVKRGKPEPDAYLLGAQLLG 152 (218)
T ss_pred eeCcCHHHHHHHHHH--------cCCcEEEEcCCCchHHHHHHHhcCC--CCccEEEEHHHhcCCCCCcHHHHHHHHHcC
Confidence 568999999999975 3799999999998888777776543 2344444454443221 23566677788
Q ss_pred cCCCcEEEEeCCCcccccCCCcccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
-..+++|+|+|++.....--..|+.
T Consensus 153 ~~p~~~l~igDs~~di~aA~~aG~~ 177 (218)
T PRK11587 153 LAPQECVVVEDAPAGVLSGLAAGCH 177 (218)
T ss_pred CCcccEEEEecchhhhHHHHHCCCE
Confidence 8999999999999766554444543
No 38
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.52 E-value=0.0034 Score=67.58 Aligned_cols=92 Identities=9% Similarity=0.133 Sum_probs=73.5
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecC---cccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g---~~vKdL~~L~ 222 (545)
...||+.+||+.|.+ ..+.+.|-|++...+++.+++.+.- ..+|...+..+.+..... .+.+-+..+|
T Consensus 216 ~l~pGa~ElL~~Lk~--------~GiklaIaSn~~~~~~~~~L~~lgL-~~yFd~Iv~sddv~~~KP~Peifl~A~~~lg 286 (381)
T PLN02575 216 RLRTGSQEFVNVLMN--------YKIPMALVSTRPRKTLENAIGSIGI-RGFFSVIVAAEDVYRGKPDPEMFIYAAQLLN 286 (381)
T ss_pred CcCcCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCC-HHHceEEEecCcCCCCCCCHHHHHHHHHHcC
Confidence 457999999999986 4799999999999999999999887 678999888887753222 3566777889
Q ss_pred cCCCcEEEEeCCCcccccCCCccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I 246 (545)
-+.+++|+|+|+...+..--..|+
T Consensus 287 l~Peecl~IGDS~~DIeAAk~AGm 310 (381)
T PLN02575 287 FIPERCIVFGNSNQTVEAAHDARM 310 (381)
T ss_pred CCcccEEEEcCCHHHHHHHHHcCC
Confidence 999999999998866554333333
No 39
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.51 E-value=0.0026 Score=65.28 Aligned_cols=93 Identities=17% Similarity=0.096 Sum_probs=65.0
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccCcCC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDL 225 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl 225 (545)
..-||+.++|+.|.+ ..+.+.|.|++...++..+++.++- ..+|...+..+......-.+.+=+.+++-+.
T Consensus 142 ~l~pg~~e~L~~L~~--------~gi~laIvSn~~~~~~~~~L~~~gl-~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 142 QLFPGVADLLAQLRS--------RSLCLGILSSNSRQNIEAFLQRQGL-RSLFSVVQAGTPILSKRRALSQLVAREGWQP 212 (273)
T ss_pred CcCCCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCC-hhheEEEEecCCCCCCHHHHHHHHHHhCcCh
Confidence 346999999999986 3689999999999999999999987 5677765543322111111223334557778
Q ss_pred CcEEEEeCCCcccccCCCcccc
Q psy17690 226 KKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 226 ~kvIivDd~~~s~~~qp~N~I~ 247 (545)
+++++|+|++.-...--..|+.
T Consensus 213 ~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 213 AAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred hHEEEECCCHHHHHHHHHCCCe
Confidence 8999999998665543344444
No 40
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.49 E-value=0.0061 Score=58.10 Aligned_cols=109 Identities=16% Similarity=0.055 Sum_probs=69.7
Q ss_pred CeEEEEeCCCeeEeeccccCcc-eeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh---------------hcH
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTG-WRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG---------------LSI 184 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g-~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~---------------~ya 184 (545)
.+.|++|+||||+-..-.+... -.+...||+.++|++|.+ ..|.+.|-|++.. .+.
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~--------~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~ 74 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQ--------AGYRVVVATNQSGIARGLFTEAQLNALHEKM 74 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHH--------CCCEEEEEeCCccccCCcCCHHHHHHHHHHH
Confidence 4689999999997652111111 125678999999999997 3699999998863 222
Q ss_pred HHHHHHhcCCCceeeEEEecCccc-----e---ecCcccccccccCcCCCcEEEEeCCCccccc
Q psy17690 185 APILEALDKENKYFYFKLFRDSTE-----F---VDGHHVKNLDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 185 ~~il~~LDp~~~~i~~rl~R~~c~-----~---~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
..+++.++- .|...++...+. . ....+.+-+..+|-+.+++++|+|+......
T Consensus 75 ~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~ 135 (181)
T PRK08942 75 DWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQA 135 (181)
T ss_pred HHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHH
Confidence 333433322 244444433221 1 1123456667788899999999999865544
No 41
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.40 E-value=0.0052 Score=59.09 Aligned_cols=105 Identities=12% Similarity=0.237 Sum_probs=63.0
Q ss_pred CeEEEEeCCCeeEeeccc-----------------cCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcC-CChh
Q psy17690 121 PYTLLLEFRDLLVHPEWT-----------------YNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTS-ESGL 182 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~-----------------~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa-~~~~ 182 (545)
|+.+|+|||.||..+.-. -..|..+..-|++...|+.|.. ...+|.+=|. ..+.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~--------~gv~lavASRt~~P~ 74 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE--------RGVKLAVASRTDEPD 74 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH--------CT--EEEEE--S-HH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH--------CCCEEEEEECCCChH
Confidence 678999999999986311 0246778999999999999996 4799999984 5689
Q ss_pred cHHHHHHHhcCCC----------ceeeEE-EecCccceecCccccccc-ccCcCCCcEEEEeCCCccc
Q psy17690 183 SIAPILEALDKEN----------KYFYFK-LFRDSTEFVDGHHVKNLD-LLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 183 ya~~il~~LDp~~----------~~i~~r-l~R~~c~~~~g~~vKdL~-~L~Rdl~kvIivDd~~~s~ 238 (545)
+|..+|+.|+- . .+|.+. +|.. +. -.|.+.|. ..|=+-+.+|.+||...+.
T Consensus 75 ~A~~~L~~l~i-~~~~~~~~~~~~~F~~~eI~~g-sK---~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 75 WARELLKLLEI-DDADGDGVPLIEYFDYLEIYPG-SK---TTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHHHHHTT--C----------CCECEEEESSS--H---HHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHHHHHhcCC-CccccccccchhhcchhheecC-ch---HHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999999987 3 444442 2221 11 12445444 3467889999999988654
No 42
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.34 E-value=0.0015 Score=61.90 Aligned_cols=81 Identities=11% Similarity=0.177 Sum_probs=61.1
Q ss_pred HHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecC---cccccccccCcCCCcEE
Q psy17690 153 DFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLNRDLKKVI 229 (545)
Q Consensus 153 ~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g---~~vKdL~~L~Rdl~kvI 229 (545)
+.|.++.+ .+.+.|-|++...+++.+++.+.- .++|...+..+++..... .+..-+.++|-+.+++|
T Consensus 94 e~L~~L~~---------~~~l~I~T~~~~~~~~~~l~~~~l-~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l 163 (188)
T PRK10725 94 EVVKAWHG---------RRPMAVGTGSESAIAEALLAHLGL-RRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCV 163 (188)
T ss_pred HHHHHHHh---------CCCEEEEcCCchHHHHHHHHhCCc-HhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeE
Confidence 56666664 478999999999999999999876 678888888877654322 24566677788899999
Q ss_pred EEeCCCcccccCCC
Q psy17690 230 AVDWNTHSLSKNRE 243 (545)
Q Consensus 230 ivDd~~~s~~~qp~ 243 (545)
+|+|++.-+..--.
T Consensus 164 ~igDs~~di~aA~~ 177 (188)
T PRK10725 164 VFEDADFGIQAARA 177 (188)
T ss_pred EEeccHhhHHHHHH
Confidence 99999865544333
No 43
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=96.33 E-value=0.0019 Score=64.09 Aligned_cols=85 Identities=16% Similarity=0.168 Sum_probs=70.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.+||..|.+ ...-+.+=|++....+..+++.+.- ..+|...+++++..... -.|.+-..+|
T Consensus 85 ~~~~pGv~~~l~~L~~--------~~i~~avaS~s~~~~~~~~L~~~gl-~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~L 155 (221)
T COG0637 85 LKPIPGVVELLEQLKA--------RGIPLAVASSSPRRAAERVLARLGL-LDYFDVIVTADDVARGKPAPDIYLLAAERL 155 (221)
T ss_pred CCCCccHHHHHHHHHh--------cCCcEEEecCChHHHHHHHHHHccC-hhhcchhccHHHHhcCCCCCHHHHHHHHHc
Confidence 4789999999999996 2388889999999999999999877 67888888877765432 2477888899
Q ss_pred CcCCCcEEEEeCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~ 238 (545)
|-+.+++|+|+|++.-.
T Consensus 156 gv~P~~CvviEDs~~Gi 172 (221)
T COG0637 156 GVDPEECVVVEDSPAGI 172 (221)
T ss_pred CCChHHeEEEecchhHH
Confidence 99999999999998543
No 44
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.26 E-value=0.0046 Score=60.19 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=67.2
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC-CceeeEEEecCcccee---cCccccccccc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE-NKYFYFKLFRDSTEFV---DGHHVKNLDLL 221 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~-~~~i~~rl~R~~c~~~---~g~~vKdL~~L 221 (545)
...||+.++|+.+.+ ..+.+.|-|++...++..+++.++-. ..+|...+..+.-... ...+.+=+.++
T Consensus 87 ~l~~G~~~~L~~L~~--------~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~ 158 (220)
T TIGR03351 87 VALPGAEEAFRSLRS--------SGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELT 158 (220)
T ss_pred ccCCCHHHHHHHHHH--------CCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHc
Confidence 577999999999975 37999999999999999999998762 1677776665442211 11234445667
Q ss_pred CcC-CCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRD-LKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rd-l~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-. .+++|+|+|++.-...--..|+.
T Consensus 159 ~~~~~~~~~~igD~~~Di~aa~~aG~~ 185 (220)
T TIGR03351 159 GVQDVQSVAVAGDTPNDLEAGINAGAG 185 (220)
T ss_pred CCCChhHeEEeCCCHHHHHHHHHCCCC
Confidence 765 78999999998665544444444
No 45
>PHA02597 30.2 hypothetical protein; Provisional
Probab=96.26 E-value=0.0028 Score=60.78 Aligned_cols=96 Identities=17% Similarity=0.074 Sum_probs=61.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC---CceeeEEEecCccceecCccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE---NKYFYFKLFRDSTEFVDGHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~---~~~i~~rl~R~~c~~~~g~~vKdL~~L 221 (545)
+...||+.++|+.|.+ .+.+++-|++.......+++.+.-. .++|+..+..+.+......+.+=++++
T Consensus 73 ~~~~pG~~e~L~~L~~---------~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~ 143 (197)
T PHA02597 73 LSAYDDALDVINKLKE---------DYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKY 143 (197)
T ss_pred ccCCCCHHHHHHHHHh---------cCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHh
Confidence 4579999999999986 4667666776665555566665331 125566666555532222233445556
Q ss_pred CcCCCcEEEEeCCCcccccCCCc--cccccCC
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNREN--ALIIPRW 251 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N--~I~I~~~ 251 (545)
| .+.+|+|||+......--.+ ||..--.
T Consensus 144 ~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 144 G--DRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred C--CCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 6 67899999999887665566 6654433
No 46
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.12 E-value=0.011 Score=55.49 Aligned_cols=86 Identities=13% Similarity=0.194 Sum_probs=57.6
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCc--------------cce-
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDS--------------TEF- 209 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~--------------c~~- 209 (545)
+..+||+.++|+.+.+ ..+.++|-|++...+++.+++.++- ..+|...+..+. |..
T Consensus 71 ~~l~~g~~~ll~~l~~--------~g~~~~i~S~~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~ 141 (188)
T TIGR01489 71 APIDPGFKEFIAFIKE--------HGIDFIVISDGNDFFIDPVLEGIGE-KDVFIEIYSNPASFDNDGRHIVWPHHCHGC 141 (188)
T ss_pred CCCCccHHHHHHHHHH--------cCCcEEEEeCCcHHHHHHHHHHcCC-hhheeEEeccCceECCCCcEEEecCCCCcc
Confidence 5789999999999976 3699999999999999999999765 455555443221 110
Q ss_pred ---ecCcccc--cccccCcC-CCcEEEEeCCCccccc
Q psy17690 210 ---VDGHHVK--NLDLLNRD-LKKVIAVDWNTHSLSK 240 (545)
Q Consensus 210 ---~~g~~vK--dL~~L~Rd-l~kvIivDd~~~s~~~ 240 (545)
..| ..| =+..+... .+++|+|+|+...+..
T Consensus 142 ~~~~~g-~~K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 142 CSCPCG-CCKGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred CcCCCC-CCHHHHHHHHHhhcCceEEEECCCcchhch
Confidence 011 112 22233334 7889999999876543
No 47
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.08 E-value=0.016 Score=55.01 Aligned_cols=116 Identities=10% Similarity=0.006 Sum_probs=76.0
Q ss_pred eEEEEeCCCeeEeecc-cc--CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC---------------hhc
Q psy17690 122 YTLLLEFRDLLVHPEW-TY--NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES---------------GLS 183 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~-~~--~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~---------------~~y 183 (545)
+.|.||.||||++.-. .+ ..--.+..=||+.+.|++|.+ ..|.++|.|+.. ..+
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~--------~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~ 73 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKK--------AGYKFVMVTNQDGLGTPSFPQADFDGPHNL 73 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHH--------CCCeEEEEeCCccccCCcCCHHHHHHHHHH
Confidence 4789999999999421 11 111135778999999999986 369999999963 457
Q ss_pred HHHHHHHhcCCCceeeEEEec-----Cccceec---CcccccccccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 184 IAPILEALDKENKYFYFKLFR-----DSTEFVD---GHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 184 a~~il~~LDp~~~~i~~rl~R-----~~c~~~~---g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
+..+++.++- . |...++. +.|.... +.+..-+..++-+.+++++|.|+......--.+|+..
T Consensus 74 ~~~~l~~~gl-~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 74 MLQIFRSQGI-I--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred HHHHHHHCCC-c--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 7778888776 2 6545542 4443322 2223334456778899999999875444434444443
No 48
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.02 E-value=0.02 Score=54.57 Aligned_cols=103 Identities=18% Similarity=0.282 Sum_probs=65.1
Q ss_pred CeEEEEeCCCeeEeeccc--c---CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChh------------c
Q psy17690 121 PYTLLLEFRDLLVHPEWT--Y---NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGL------------S 183 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~--~---~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~------------y 183 (545)
.+++++|+||||+-..-. + ...|.. .-||+.+.|+.|.+ ..|.++|-|+.... .
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~-~~pgv~e~L~~Lk~--------~G~~l~I~TN~~~~~~~~~~~~~~~~~ 83 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRF-LYPEIPAKLQELDD--------EGYKIVIFTNQSGIGRGKLSAESFKNK 83 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEE-ecCCHHHHHHHHHH--------CCCEEEEEeCCcccccCcccHHHHHHH
Confidence 457899999999975311 1 123432 34999999999975 47999999998763 4
Q ss_pred HHHHHHHhcCCCceeeEEEecCccce--e-cCcccccccccC--cCCCcEEEEeCCC
Q psy17690 184 IAPILEALDKENKYFYFKLFRDSTEF--V-DGHHVKNLDLLN--RDLKKVIAVDWNT 235 (545)
Q Consensus 184 a~~il~~LDp~~~~i~~rl~R~~c~~--~-~g~~vKdL~~L~--Rdl~kvIivDd~~ 235 (545)
+..+++.+.-. . ...+.-+.... - .+.+-.=+..+| -+.+++++|.|++
T Consensus 84 i~~~l~~~gl~--~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 84 IEAFLEKLKVP--I-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHcCCC--E-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 66777777652 1 22222222111 1 112222344556 6889999999986
No 49
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.00 E-value=0.0066 Score=55.60 Aligned_cols=79 Identities=18% Similarity=0.107 Sum_probs=58.7
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
...||+.++|+.+.+ ..+.+.|.|++....+..+++.+ - ..+|...+..+++. .. ..+.+=+.++|
T Consensus 64 ~~~~g~~e~l~~L~~--------~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~ 132 (154)
T TIGR01549 64 AYIRGAADLLKRLKE--------AGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLG 132 (154)
T ss_pred eeccCHHHHHHHHHH--------CcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcC
Confidence 346999999999965 36999999999999999999995 2 34666666666553 21 12344556677
Q ss_pred cCCCcEEEEeCCCc
Q psy17690 223 RDLKKVIAVDWNTH 236 (545)
Q Consensus 223 Rdl~kvIivDd~~~ 236 (545)
-+. ++|+|.|+..
T Consensus 133 ~~~-~~l~iGDs~~ 145 (154)
T TIGR01549 133 LPP-EVLHVGDNLN 145 (154)
T ss_pred CCC-CEEEEeCCHH
Confidence 777 9999999864
No 50
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.69 E-value=0.018 Score=58.28 Aligned_cols=79 Identities=10% Similarity=0.149 Sum_probs=56.0
Q ss_pred CCCeEEEEeCCCeeEeeccccCcc-----------------e-------eeeeCCC--hhHHHHhhcCCCCCCCCCCceE
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTG-----------------W-------RFKKRPF--VDDFFETLNGSTTDRNNVPLFE 172 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g-----------------~-------~~~kRPg--ld~FL~~ls~~~~~~~~~~~yE 172 (545)
++|+.+++||||||+.+.-....| | .-...|+ ..+||+++.+ ..+.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~--------~G~~ 132 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR--------RGDA 132 (237)
T ss_pred CCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH--------CCCE
Confidence 457799999999999984210111 1 1233555 9999999986 4799
Q ss_pred EEEEcCC----ChhcHHHHHHHhcCCCceeeEEEecCc
Q psy17690 173 VVIFTSE----SGLSIAPILEALDKENKYFYFKLFRDS 206 (545)
Q Consensus 173 ivIfTa~----~~~ya~~il~~LDp~~~~i~~rl~R~~ 206 (545)
|.|-|+. ...+++.+++.+.- ..+|...+..+.
T Consensus 133 i~iVTnr~~~k~~~~a~~ll~~lGi-~~~f~~i~~~d~ 169 (237)
T TIGR01672 133 IFFVTGRTPGKTDTVSKTLAKNFHI-PAMNPVIFAGDK 169 (237)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHhCC-chheeEEECCCC
Confidence 9999998 56789999998876 456655444443
No 51
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.66 E-value=0.026 Score=58.37 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=58.7
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeee-eCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCce
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFK-KRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKY 197 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~-kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~ 197 (545)
.++-.+|+|||+|||-.+-. +. .=|.+-+-|..+.+ ..+-+|+||.|.+.+|..-++.+.- .++
T Consensus 120 ~~phVIVfDlD~TLItd~~~------v~Ir~~~v~~sL~~Lk~--------~g~vLvLWSyG~~eHV~~sl~~~~L-~~~ 184 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD------VRIRDPAVYDSLRELKE--------QGCVLVLWSYGNREHVRHSLKELKL-EGY 184 (297)
T ss_pred CCCcEEEEECCCcccccCCc------cccCChHHHHHHHHHHH--------cCCEEEEecCCCHHHHHHHHHHhCC-ccc
Confidence 34669999999999976321 22 23788889999987 3679999999999999999999987 488
Q ss_pred eeEEEecCcc
Q psy17690 198 FYFKLFRDST 207 (545)
Q Consensus 198 i~~rl~R~~c 207 (545)
|.-.|.+.+.
T Consensus 185 Fd~ii~~G~~ 194 (297)
T PF05152_consen 185 FDIIICGGNK 194 (297)
T ss_pred cEEEEeCCcc
Confidence 8887765443
No 52
>PLN02940 riboflavin kinase
Probab=95.59 E-value=0.0073 Score=64.92 Aligned_cols=93 Identities=10% Similarity=0.085 Sum_probs=69.9
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHH-HhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILE-ALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~-~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
...||+.++|+.|.+ ..+.+.|-|++...++..+++ ..+- ..+|...+..+++.... ..+.+-++.+
T Consensus 93 ~l~pGv~elL~~Lk~--------~g~~l~IvTn~~~~~~~~~l~~~~gl-~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~l 163 (382)
T PLN02940 93 KALPGANRLIKHLKS--------HGVPMALASNSPRANIEAKISCHQGW-KESFSVIVGGDEVEKGKPSPDIFLEAAKRL 163 (382)
T ss_pred CCCcCHHHHHHHHHH--------CCCcEEEEeCCcHHHHHHHHHhccCh-HhhCCEEEehhhcCCCCCCHHHHHHHHHHc
Confidence 457999999999976 379999999999999998887 5554 56888888888765322 2345566777
Q ss_pred CcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-..+++|+|+|+......--..|+.
T Consensus 164 gv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 164 NVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred CCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 88889999999999766443344443
No 53
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.58 E-value=0.034 Score=54.61 Aligned_cols=95 Identities=9% Similarity=0.111 Sum_probs=60.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEE--EecCcccee------------
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFK--LFRDSTEFV------------ 210 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~r--l~R~~c~~~------------ 210 (545)
+..+||+.+||+.+.+ ..+.++|.|++...+++++++.+-+...++... +..+.....
T Consensus 73 ~~l~pG~~e~l~~l~~--------~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~ 144 (219)
T PRK09552 73 AEIREGFHEFVQFVKE--------NNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNH 144 (219)
T ss_pred CCcCcCHHHHHHHHHH--------cCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCcccccccc
Confidence 4689999999999986 479999999999999999999872212343222 111111100
Q ss_pred cCc-ccccccccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 211 DGH-HVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 211 ~g~-~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
.|. ..+-+..++.+..++|+|-|+..-...-...++.
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcc
Confidence 010 1223344566777899999998666543334443
No 54
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.56 E-value=0.021 Score=52.37 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=49.1
Q ss_pred eEEEEeCCCeeEeeccccCccee-eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHH------------HHH
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWR-FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIA------------PIL 188 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~-~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~------------~il 188 (545)
+++++||||||++.+ ...+. ....+.+.+-|+.+.+ ..++|++.|+-...... .++
T Consensus 2 K~i~~DiDGTL~~~~---~~~y~~~~~~~~~ie~L~~l~~--------~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~ 70 (126)
T TIGR01689 2 KRLVMDLDNTITLTE---NGDYANVAPILAVIEKLRHYKA--------LGFEIVISSSRNMRTYEGNVGKINIHTLPIII 70 (126)
T ss_pred CEEEEeCCCCcccCC---CCcccccccCHHHHHHHHHHHH--------CCCEEEEECCCCchhhhccccccchhhHHHHH
Confidence 478999999997652 11121 3466777888888754 37999999999887766 777
Q ss_pred HHhcCCCceeeEEEecC
Q psy17690 189 EALDKENKYFYFKLFRD 205 (545)
Q Consensus 189 ~~LDp~~~~i~~rl~R~ 205 (545)
+.|+..+-.+...+.|.
T Consensus 71 ~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 71 LWLNQHNVPYDEIYVGK 87 (126)
T ss_pred HHHHHcCCCCceEEeCC
Confidence 88877333333344433
No 55
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.52 E-value=0.017 Score=54.86 Aligned_cols=95 Identities=14% Similarity=0.100 Sum_probs=67.1
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC-hhcHHHHHHHhcCCCcee
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES-GLSIAPILEALDKENKYF 198 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~-~~ya~~il~~LDp~~~~i 198 (545)
+-..||+|+|+||.... . ...-|++.++|+.|.+ ..+.++|.|++. ...+..+++.++- ..+
T Consensus 24 ~v~~vv~D~Dgtl~~~~-----~--~~~~pgv~e~L~~Lk~--------~g~~l~I~Sn~~~~~~~~~~~~~~gl-~~~- 86 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPD-----H--NEAYPALRDWIEELKA--------AGRKLLIVSNNAGEQRAKAVEKALGI-PVL- 86 (170)
T ss_pred CCCEEEEecCCccccCC-----C--CCcChhHHHHHHHHHH--------cCCEEEEEeCCchHHHHHHHHHHcCC-EEE-
Confidence 45689999999999662 1 2456999999999986 369999999998 6777777777654 111
Q ss_pred eEEEecCccceecCcccccccccCcCCCcEEEEeCCCc
Q psy17690 199 YFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTH 236 (545)
Q Consensus 199 ~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~ 236 (545)
. ..+.-....+.+=+..++-+.+++++|+|+..
T Consensus 87 ----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~ 119 (170)
T TIGR01668 87 ----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLF 119 (170)
T ss_pred ----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcch
Confidence 1 11222222334445667888899999999973
No 56
>PRK06769 hypothetical protein; Validated
Probab=95.36 E-value=0.029 Score=53.53 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=66.4
Q ss_pred eEEEEeCCCeeEeecc-ccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChh-----cHHHHHHHhcCCC
Q psy17690 122 YTLLLEFRDLLVHPEW-TYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGL-----SIAPILEALDKEN 195 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~-~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~-----ya~~il~~LDp~~ 195 (545)
..|.||+||||.-..+ .... .+..-||+.++|++|.+ ..|.+.|.|++... -.......+.. .
T Consensus 5 ~~~~~d~d~~~~~~~~~~~~~--~~~~~pgv~e~L~~Lk~--------~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~ 73 (173)
T PRK06769 5 QAIFIDRDGTIGGDTTIHYPG--SFTLFPFTKASLQKLKA--------NHIKIFSFTNQPGIADGIATIADFVQELKG-F 73 (173)
T ss_pred cEEEEeCCCcccCCCCCCCHH--HeEECCCHHHHHHHHHH--------CCCEEEEEECCchhcCCcCCHHHHHHHHHh-C
Confidence 4789999999952211 1111 34567999999999986 37999999987641 11233333433 2
Q ss_pred ceeeEEEe----cCccc---eecCcccccccccCcCCCcEEEEeCCCccccc
Q psy17690 196 KYFYFKLF----RDSTE---FVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 196 ~~i~~rl~----R~~c~---~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
++..+... .+.+. -..+.+.+-+.++|-+.+++|+|+|++.....
T Consensus 74 g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~a 125 (173)
T PRK06769 74 GFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVA 125 (173)
T ss_pred CcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHH
Confidence 22222221 11111 12234556677788899999999999865543
No 57
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.11 E-value=0.016 Score=55.63 Aligned_cols=90 Identities=23% Similarity=0.177 Sum_probs=59.2
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEec--------CccceecC--ccc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFR--------DSTEFVDG--HHV 215 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R--------~~c~~~~g--~~v 215 (545)
..+||+.+||+.+.+ . +.++|-|++...+++.+++.+.- ..+|...+.- ..+...++ ..+
T Consensus 68 ~~~pg~~e~L~~L~~--------~-~~~~IvS~~~~~~~~~~l~~~gl-~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l 137 (205)
T PRK13582 68 DPLPGAVEFLDWLRE--------R-FQVVILSDTFYEFAGPLMRQLGW-PTLFCHSLEVDEDGMITGYDLRQPDGKRQAV 137 (205)
T ss_pred CCCCCHHHHHHHHHh--------c-CCEEEEeCCcHHHHHHHHHHcCC-chhhcceEEECCCCeEECccccccchHHHHH
Confidence 457999999999997 4 89999999999999999999875 3444433321 11100011 112
Q ss_pred ccccccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 216 KNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 216 KdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
+ .++....++|+|-|+..-+..-..+++.|
T Consensus 138 ~---~~~~~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 138 K---ALKSLGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred H---HHHHhCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 2 23444578999999997765544444444
No 58
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.05 E-value=0.021 Score=62.70 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=64.6
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccce--ecCcccccccccCc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEF--VDGHHVKNLDLLNR 223 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~--~~g~~vKdL~~L~R 223 (545)
...||+.++|+++.+ ..+.+.|.|++...++..+++.++- ..+|...+..+.... ....+.+-+..+
T Consensus 330 ~l~pG~~e~L~~Lk~--------~g~~l~IvS~~~~~~~~~~l~~~~l-~~~f~~i~~~d~v~~~~kP~~~~~al~~l-- 398 (459)
T PRK06698 330 ALYPNVKEIFTYIKE--------NNCSIYIASNGLTEYLRAIVSYYDL-DQWVTETFSIEQINSLNKSDLVKSILNKY-- 398 (459)
T ss_pred CcCCCHHHHHHHHHH--------CCCeEEEEeCCchHHHHHHHHHCCc-HhhcceeEecCCCCCCCCcHHHHHHHHhc--
Confidence 457999999999975 3799999999999999999999877 567877776655421 111223333334
Q ss_pred CCCcEEEEeCCCcccccCCCccc
Q psy17690 224 DLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 224 dl~kvIivDd~~~s~~~qp~N~I 246 (545)
+++++|+|.|++.-+..-...|+
T Consensus 399 ~~~~~v~VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 399 DIKEAAVVGDRLSDINAAKDNGL 421 (459)
T ss_pred CcceEEEEeCCHHHHHHHHHCCC
Confidence 36889999999866655444444
No 59
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.99 E-value=0.064 Score=57.39 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=72.3
Q ss_pred CeEEEEeCCCeeEeec---cccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCC----C-----------hh
Q psy17690 121 PYTLLLEFRDLLVHPE---WTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE----S-----------GL 182 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~---~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~----~-----------~~ 182 (545)
++.|+||-||||+... +.....-.+...||+.++|..|.+ ..|.++|.|+. . ..
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~--------~G~kL~IvTNq~g~G~~~~~~~~l~~~~~ 73 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK--------AGYKLVMVTNQDGLGTDSFPQEDFDPPHN 73 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh--------CCCeEEEEECCccccCccccHHHHhhHHH
Confidence 5789999999999863 222223347899999999999986 37999999994 2 33
Q ss_pred cHHHHHHHhcCCCceeeEEEec-----Cccceec---CcccccccccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 183 SIAPILEALDKENKYFYFKLFR-----DSTEFVD---GHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 183 ya~~il~~LDp~~~~i~~rl~R-----~~c~~~~---g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
++..+++.+.- .|...++. +.|.... +.+-.-+..++-+.+++++|-|+..-+..--.+|+.
T Consensus 74 ~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 74 LMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 44455555433 24333333 3432211 111122234567889999999987544443344443
No 60
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.60 E-value=0.07 Score=59.89 Aligned_cols=106 Identities=13% Similarity=0.184 Sum_probs=71.4
Q ss_pred CCeEEEEeCCCeeEeecc--cc---CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh------------h
Q psy17690 120 PPYTLLLEFRDLLVHPEW--TY---NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG------------L 182 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~--~~---~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~------------~ 182 (545)
..+.+.||+||||+.... .+ ...|. ..-||+.+.|+.|.+ ..|.|+|+|+... .
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~-~l~pgV~e~L~~L~~--------~Gy~IvIvTNQ~gI~~G~~~~~~~~~ 237 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQ-IIFPEIPEKLKELEA--------DGFKICIFTNQGGIARGKINADDFKA 237 (526)
T ss_pred cCcEEEEECCCCccccCCCccCCCCHHHee-ecccCHHHHHHHHHH--------CCCEEEEEECCcccccCcccHHHHHH
Confidence 467999999999997632 11 12343 245999999999987 5799999999877 3
Q ss_pred cHHHHHHHhcCCCceeeEEEecCccceec---Ccc---ccccc-ccCcCCCcEEEEeCCCcc
Q psy17690 183 SIAPILEALDKENKYFYFKLFRDSTEFVD---GHH---VKNLD-LLNRDLKKVIAVDWNTHS 237 (545)
Q Consensus 183 ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~---vKdL~-~L~Rdl~kvIivDd~~~s 237 (545)
.+..+++.++- .|...+.-+.|.+.. |.+ .+++. .++-|+++.++|-|...-
T Consensus 238 ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr 296 (526)
T TIGR01663 238 KIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGR 296 (526)
T ss_pred HHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccc
Confidence 57788888865 255444445444322 332 23331 124588999999998743
No 61
>PRK08238 hypothetical protein; Validated
Probab=94.55 E-value=0.029 Score=62.22 Aligned_cols=75 Identities=13% Similarity=0.140 Sum_probs=56.1
Q ss_pred CCCeEEEEeCCCeeEeeccccC--------c-------------c-------------e---eeeeCCChhHHHHhhcCC
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYN--------T-------------G-------------W---RFKKRPFVDDFFETLNGS 161 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~--------~-------------g-------------~---~~~kRPgld~FL~~ls~~ 161 (545)
.....||+||||||++++.-.+ + | . ....+|++.++++.+.+
T Consensus 8 ~~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~- 86 (479)
T PRK08238 8 SRDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERA- 86 (479)
T ss_pred CCCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHH-
Confidence 3456899999999999852111 0 0 0 13468999999999976
Q ss_pred CCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecC
Q psy17690 162 TTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRD 205 (545)
Q Consensus 162 ~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~ 205 (545)
..+.++|-|++...+++++++++.- |...+..+
T Consensus 87 -------~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd 119 (479)
T PRK08238 87 -------AGRKLVLATASDERLAQAVAAHLGL----FDGVFASD 119 (479)
T ss_pred -------CCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCC
Confidence 4799999999999999999999843 55555444
No 62
>COG4996 Predicted phosphatase [General function prediction only]
Probab=94.27 E-value=0.13 Score=47.88 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=82.8
Q ss_pred EEEEeCCCeeEeec--------cc--------cCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHH
Q psy17690 123 TLLLEFRDLLVHPE--------WT--------YNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAP 186 (545)
Q Consensus 123 tLVLDLDeTLvhs~--------~~--------~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~ 186 (545)
.+|+|+|+||.... |+ ...|..+..+|++.+||+.+.. -.|=+-.+|=.-..-|-+
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn--------sG~i~~~~sWN~~~kA~~ 73 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN--------SGYILGLASWNFEDKAIK 73 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh--------CCcEEEEeecCchHHHHH
Confidence 58999999998641 11 2347789999999999999986 368888888888888999
Q ss_pred HHHHhcCCCceeeEEEecCccceecCcccccccccC--c----CCCcEEEEeCCCcccc---cCCCccccccCCC
Q psy17690 187 ILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLN--R----DLKKVIAVDWNTHSLS---KNRENALIIPRWN 252 (545)
Q Consensus 187 il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~--R----dl~kvIivDd~~~s~~---~qp~N~I~I~~~~ 252 (545)
++.+||- ..+|.|.+...+-.. .-+..+=|..++ | -++++|.+||....+. .+-.|.=.++.|.
T Consensus 74 aLral~~-~~yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~ 146 (164)
T COG4996 74 ALRALDL-LQYFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWK 146 (164)
T ss_pred HHHHhch-hhhEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeec
Confidence 9999999 789988776544321 111222233332 2 4678999999986653 2444444444443
No 63
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=94.19 E-value=0.053 Score=50.71 Aligned_cols=108 Identities=15% Similarity=0.050 Sum_probs=69.4
Q ss_pred eEEEEeCCCeeEeec-cccCcc---eeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCce
Q psy17690 122 YTLLLEFRDLLVHPE-WTYNTG---WRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKY 197 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~-~~~~~g---~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~ 197 (545)
+.++||+||||+-.. +-...| -.+..+++. -+++|.+ ..+.++|-|+.....+..+++.+.- ..+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~--~i~~Lk~--------~G~~i~IvTn~~~~~~~~~l~~~gi-~~~ 70 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGY--GIRCALK--------SGIEVAIITGRKAKLVEDRCKTLGI-THL 70 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEEEechhHH--HHHHHHH--------CCCEEEEEECCCCHHHHHHHHHcCC-CEE
Confidence 468999999999631 111112 113455554 5777765 3799999999999999999999876 444
Q ss_pred eeEEEecCccceecCcc-cccccccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 198 FYFKLFRDSTEFVDGHH-VKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 198 i~~rl~R~~c~~~~g~~-vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|.. ....... .+=+..+|-+.+++++|-|+..-..+-...++.
T Consensus 71 ~~~-------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 71 YQG-------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred Eec-------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 432 1111222 233355677889999999888666554444443
No 64
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.07 E-value=0.14 Score=51.96 Aligned_cols=80 Identities=11% Similarity=0.196 Sum_probs=51.7
Q ss_pred CCCCeEEEEeCCCeeEeec---cccCc---------------------ceeeeeCCC--hhHHHHhhcCCCCCCCCCCce
Q psy17690 118 YQPPYTLLLEFRDLLVHPE---WTYNT---------------------GWRFKKRPF--VDDFFETLNGSTTDRNNVPLF 171 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~---~~~~~---------------------g~~~~kRPg--ld~FL~~ls~~~~~~~~~~~y 171 (545)
.++|+.+|+|+|||+++++ |-.+. ++...-+|+ +.+||+.+.+ ..+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~--------~G~ 131 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK--------RGD 131 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH--------CCC
Confidence 3567899999999999842 11010 011234455 9999999954 379
Q ss_pred EEEEEcCC----ChhcHHHHHHHhcC-CCceeeEEEecC
Q psy17690 172 EVVIFTSE----SGLSIAPILEALDK-ENKYFYFKLFRD 205 (545)
Q Consensus 172 EivIfTa~----~~~ya~~il~~LDp-~~~~i~~rl~R~ 205 (545)
+|++-|+. ...+++.+++.+.- ...+|...+..+
T Consensus 132 ~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd 170 (237)
T PRK11009 132 SIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGD 170 (237)
T ss_pred eEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence 99999984 45688888886643 233554444443
No 65
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.06 E-value=0.056 Score=50.35 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=62.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.+||+.+.+ ..+.++|.|++.... ..++..++- ..+|...++.+.+.... ..+.+=+..+
T Consensus 84 ~~~~~g~~~~l~~l~~--------~g~~~~i~Tn~~~~~-~~~~~~~~l-~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 153 (183)
T TIGR01509 84 LKPLPGVEPLLEALRA--------RGKKLALLTNSPRDH-AVLVQELGL-RDLFDVVIFSGDVGRGKPDPDIYLLALKKL 153 (183)
T ss_pred CccCcCHHHHHHHHHH--------CCCeEEEEeCCchHH-HHHHHhcCC-HHHCCEEEEcCCCCCCCCCHHHHHHHHHHc
Confidence 4678999999999986 369999999999888 666665665 55777777755543222 2344556667
Q ss_pred CcCCCcEEEEeCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~ 238 (545)
|.+.+++|+|||++...
T Consensus 154 ~~~~~~~~~vgD~~~di 170 (183)
T TIGR01509 154 GLKPEECLFVDDSPAGI 170 (183)
T ss_pred CCCcceEEEEcCCHHHH
Confidence 88999999999998544
No 66
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=93.98 E-value=0.06 Score=56.82 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=62.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccce------------ecC
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEF------------VDG 212 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~------------~~g 212 (545)
+..+||+.++|+.+.+ ..+.++|.|++...+++.+++.+.- ...+...+--....+ .+.
T Consensus 180 l~l~pGa~elL~~Lk~--------~G~~~aIvSgg~~~~~~~l~~~Lgl-d~~~an~lei~dg~ltg~v~g~iv~~k~K~ 250 (322)
T PRK11133 180 LPLMPGLTELVLKLQA--------LGWKVAIASGGFTYFADYLRDKLRL-DAAVANELEIMDGKLTGNVLGDIVDAQYKA 250 (322)
T ss_pred CCCChhHHHHHHHHHH--------cCCEEEEEECCcchhHHHHHHHcCC-CeEEEeEEEEECCEEEeEecCccCCcccHH
Confidence 4678999999999986 4799999999999999999998865 333332221111110 011
Q ss_pred cccccc-cccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 213 HHVKNL-DLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 213 ~~vKdL-~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
..++.+ +.+|-++++||.|-|+..-..+=-.-|+.|
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 122222 356778999999999997766544444444
No 67
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.44 E-value=0.14 Score=50.93 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=62.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCcccee---cCcc-------
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFV---DGHH------- 214 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~---~g~~------- 214 (545)
...+||..+.++.+.+ ..+.|+|.|+|...++++|.+.|.- ...+..++-.+...+. .|.+
T Consensus 76 ~~l~~ga~elv~~lk~--------~G~~v~iiSgg~~~lv~~ia~~lg~-d~~~an~l~~~dG~ltG~v~g~~~~~~~K~ 146 (212)
T COG0560 76 LRLTPGAEELVAALKA--------AGAKVVIISGGFTFLVEPIAERLGI-DYVVANELEIDDGKLTGRVVGPICDGEGKA 146 (212)
T ss_pred CcCCccHHHHHHHHHH--------CCCEEEEEcCChHHHHHHHHHHhCC-chheeeEEEEeCCEEeceeeeeecCcchHH
Confidence 5789999999999987 4799999999999999999999977 5555555555542111 1111
Q ss_pred --ccc-ccccCcCCCcEEEEeCCCccccc
Q psy17690 215 --VKN-LDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 215 --vKd-L~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
++. ++.+|-++++++.+=|+..-..+
T Consensus 147 ~~l~~~~~~~g~~~~~~~a~gDs~nDlpm 175 (212)
T COG0560 147 KALRELAAELGIPLEETVAYGDSANDLPM 175 (212)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCchhhHHH
Confidence 111 23357788899999888765544
No 68
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=93.40 E-value=0.11 Score=50.45 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=66.2
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.|.+ ..+-+.|.|++...++...++.++- ..+|...+..+.+.... ..+.+=++++
T Consensus 93 ~~~~~g~~~~L~~L~~--------~g~~~~i~Tn~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 163 (221)
T TIGR02253 93 LRVYPGVRDTLMELRE--------SGYRLGIITDGLPVKQWEKLERLGV-RDFFDAVITSEEEGVEKPHPKIFYAALKRL 163 (221)
T ss_pred CCCCCCHHHHHHHHHH--------CCCEEEEEeCCchHHHHHHHHhCCh-HHhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence 4688999999999986 3699999999999999999999887 67888877766554321 1345567778
Q ss_pred CcCCCcEEEEeCCC
Q psy17690 222 NRDLKKVIAVDWNT 235 (545)
Q Consensus 222 ~Rdl~kvIivDd~~ 235 (545)
|-+.+++|+|.|++
T Consensus 164 ~~~~~~~~~igDs~ 177 (221)
T TIGR02253 164 GVKPEEAVMVGDRL 177 (221)
T ss_pred CCChhhEEEECCCh
Confidence 88889999999997
No 69
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=93.08 E-value=0.093 Score=50.58 Aligned_cols=94 Identities=20% Similarity=0.150 Sum_probs=72.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCcccee---cCccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~---~g~~vKdL~~L 221 (545)
+...||+.++|++|.+ ..+.++|.|++...++..+++.++- .++|...+..+.+... ...+.+=+.++
T Consensus 74 ~~~~~g~~~~L~~L~~--------~g~~~~i~Sn~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 144 (205)
T TIGR01454 74 VEVFPGVPELLAELRA--------DGVGTAIATGKSGPRARSLLEALGL-LPLFDHVIGSDEVPRPKPAPDIVREALRLL 144 (205)
T ss_pred cccCCCHHHHHHHHHH--------CCCeEEEEeCCchHHHHHHHHHcCC-hhheeeEEecCcCCCCCCChHHHHHHHHHc
Confidence 5678999999999986 3699999999999999999999887 6788887776655321 12334455667
Q ss_pred CcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-+.+++|+|+|+...+..--.+|+.
T Consensus 145 ~~~~~~~l~igD~~~Di~aA~~~Gi~ 170 (205)
T TIGR01454 145 DVPPEDAVMVGDAVTDLASARAAGTA 170 (205)
T ss_pred CCChhheEEEcCCHHHHHHHHHcCCe
Confidence 88889999999998766655555655
No 70
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.97 E-value=0.096 Score=51.53 Aligned_cols=49 Identities=22% Similarity=0.215 Sum_probs=40.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEe
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLF 203 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~ 203 (545)
+..+||..+|++.+.+ .+.++|-|++...++.++++.+.- ..+|..++-
T Consensus 67 i~l~pga~ell~~lk~---------~~~~~IVS~~~~~~~~~il~~lgi-~~~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRE---------RFQVVILSDTFYEFSQPLMRQLGF-PTLLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHh---------CCeEEEEeCChHHHHHHHHHHcCC-chhhceeeE
Confidence 4689999999999997 469999999999999999999876 455554443
No 71
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=92.88 E-value=0.14 Score=49.28 Aligned_cols=95 Identities=17% Similarity=0.118 Sum_probs=71.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.+.+ ..+.++|.|++...++..+++.++- ..+|...+..+...... ..+.+-++.+
T Consensus 84 ~~~~~g~~~~L~~l~~--------~g~~~~i~S~~~~~~~~~~l~~~~l-~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~ 154 (213)
T TIGR01449 84 TSVFPGVEATLGALRA--------KGLRLGLVTNKPTPLARPLLELLGL-AKYFSVLIGGDSLAQRKPHPDPLLLAAERL 154 (213)
T ss_pred CccCCCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCc-HhhCcEEEecCCCCCCCCChHHHHHHHHHc
Confidence 4689999999999975 3699999999999999999999876 56777666555432211 1245567788
Q ss_pred CcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
|-+.+++++|+|+..-+..--..|+..
T Consensus 155 ~~~~~~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 155 GVAPQQMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCeE
Confidence 889999999999987765544444443
No 72
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=92.86 E-value=0.26 Score=46.71 Aligned_cols=106 Identities=21% Similarity=0.215 Sum_probs=57.3
Q ss_pred eEEEEeCCCeeEeecccc-----CcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChh--------------
Q psy17690 122 YTLLLEFRDLLVHPEWTY-----NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGL-------------- 182 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~-----~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~-------------- 182 (545)
+.+.+|||||||.+.... ...| ...-|++-+-|.++.+ ..|.|||+|.....
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~-~~~~~~v~~~L~~l~~--------~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ 71 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDW-KFFPPGVPEALRELHK--------KGYKIVIVTNQSGIGRGMGEKDLENFHE 71 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGG-EEC-TTHHHHHHHHHH--------TTEEEEEEEE-CCCCCTBTCCHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHh-hhcchhHHHHHHHHHh--------cCCeEEEEeCccccccccccchHHHHHH
Confidence 367899999999985421 2234 3456789999999987 58999999986432
Q ss_pred cHHHHHHHhcCCCceeeEEEecCccce-ecCcccccccccC----cCCCcEEEEeCCCcc
Q psy17690 183 SIAPILEALDKENKYFYFKLFRDSTEF-VDGHHVKNLDLLN----RDLKKVIAVDWNTHS 237 (545)
Q Consensus 183 ya~~il~~LDp~~~~i~~rl~R~~c~~-~~g~~vKdL~~L~----Rdl~kvIivDd~~~s 237 (545)
..+.+++.|+- .-.+-+....+.|+. ..|.+-.=++.++ =|+++.++|=|.+..
T Consensus 72 ki~~il~~l~i-p~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 72 KIENILKELGI-PIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp HHHHHHHHCTS--EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred HHHHHHHHcCC-ceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 12234444433 111111122444544 2344322222333 378888888876543
No 73
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.81 E-value=0.24 Score=51.01 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=52.5
Q ss_pred CCeEEEEeCCCeeEeeccc------cC-----cce-------eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh
Q psy17690 120 PPYTLLLEFRDLLVHPEWT------YN-----TGW-------RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG 181 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~------~~-----~g~-------~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~ 181 (545)
+|+.+|+|||||+++...- .. ..| ....-||+.+||+++.+ ....|+|-|+...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~--------~G~~v~iVTnR~~ 145 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS--------KGVKIFYVSNRSE 145 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH--------CCCeEEEEeCCCc
Confidence 4679999999999976310 00 112 24567999999999975 3689999999887
Q ss_pred hcHHHHHHHhcC---CCceeeEEEecC
Q psy17690 182 LSIAPILEALDK---ENKYFYFKLFRD 205 (545)
Q Consensus 182 ~ya~~il~~LDp---~~~~i~~rl~R~ 205 (545)
...+..++.|.. ......+.+.|+
T Consensus 146 ~~~~~T~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 146 KEKAATLKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred chHHHHHHHHHHcCcCCCCcceEEeCC
Confidence 776655555543 111235556665
No 74
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=92.40 E-value=0.17 Score=50.86 Aligned_cols=95 Identities=8% Similarity=0.096 Sum_probs=75.6
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.|.+ ..+.+.|-|++...++..+++.++- ..+|...+..+.+.... ..+.+=+.++
T Consensus 107 ~~l~pgv~e~L~~L~~--------~g~~l~I~Tn~~~~~~~~~l~~~gl-~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~ 177 (248)
T PLN02770 107 LKPLNGLYKLKKWIED--------RGLKRAAVTNAPRENAELMISLLGL-SDFFQAVIIGSECEHAKPHPDPYLKALEVL 177 (248)
T ss_pred CCcCccHHHHHHHHHH--------cCCeEEEEeCCCHHHHHHHHHHcCC-hhhCcEEEecCcCCCCCCChHHHHHHHHHh
Confidence 4567999999999975 3799999999999999999999987 67888888877764322 2355667788
Q ss_pred CcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
|-+.+++|+|+|++.-...--.+|+..
T Consensus 178 ~~~~~~~l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 178 KVSKDHTFVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred CCChhHEEEEcCCHHHHHHHHHCCCEE
Confidence 888999999999997665545556553
No 75
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=91.98 E-value=0.21 Score=48.16 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=71.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+..+||+.++|+.+.+ . +.++|-|++....+..+++.+.- ..+|.+.+..+.+.... ..+-+=+.++
T Consensus 96 ~~~~~g~~~~L~~l~~--------~-~~~~i~Sn~~~~~~~~~l~~~~l-~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~ 165 (224)
T TIGR02254 96 HQLLPGAFELMENLQQ--------K-FRLYIVTNGVRETQYKRLRKSGL-FPFFDDIFVSEDAGIQKPDKEIFNYALERM 165 (224)
T ss_pred CeeCccHHHHHHHHHh--------c-CcEEEEeCCchHHHHHHHHHCCc-HhhcCEEEEcCccCCCCCCHHHHHHHHHHh
Confidence 4678999999999997 4 99999999999999999999876 66888888776654322 2345667788
Q ss_pred -CcCCCcEEEEeCCC-cccccCCCccc
Q psy17690 222 -NRDLKKVIAVDWNT-HSLSKNRENAL 246 (545)
Q Consensus 222 -~Rdl~kvIivDd~~-~s~~~qp~N~I 246 (545)
|-+.+++|+|+|++ ..+..--.+|+
T Consensus 166 ~~~~~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 166 PKFSKEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred cCCCchheEEECCCcHHHHHHHHHCCC
Confidence 88899999999997 35544444444
No 76
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=91.88 E-value=0.15 Score=48.99 Aligned_cols=111 Identities=13% Similarity=0.002 Sum_probs=66.2
Q ss_pred CCeEEEEeCCCeeEeec-cccCcc--eeee-eCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCC
Q psy17690 120 PPYTLLLEFRDLLVHPE-WTYNTG--WRFK-KRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKEN 195 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~-~~~~~g--~~~~-kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~ 195 (545)
..+.+|+|+||||+... |....+ +... .|-+ .=++.+.+ ..++++|-|+.....+..+++.+.- .
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~--~~i~~L~~--------~Gi~v~I~T~~~~~~v~~~l~~lgl-~ 88 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDG--YGIRCLLT--------SGIEVAIITGRKSKLVEDRMTTLGI-T 88 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccch--HHHHHHHH--------CCCEEEEEeCCCcHHHHHHHHHcCC-c
Confidence 46799999999999752 111112 1111 1221 12233332 2699999999999999999999865 3
Q ss_pred ceeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 196 KYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 196 ~~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
.+|. .+.-....+.+=+..+|-+.+.|++|-|+..-...--.-|+.
T Consensus 89 ~~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 89 HLYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred eeec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3332 111111122333456688889999999888665543334443
No 77
>PLN02954 phosphoserine phosphatase
Probab=91.79 E-value=0.16 Score=49.41 Aligned_cols=86 Identities=17% Similarity=0.247 Sum_probs=55.9
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC-CceeeEEEe-cCccc-----------eecC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE-NKYFYFKLF-RDSTE-----------FVDG 212 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~-~~~i~~rl~-R~~c~-----------~~~g 212 (545)
..+||+.++|+.+.+ ..+.++|-|++...+++.+++.+.-. ..+|...+. .+... ...+
T Consensus 84 ~l~pg~~e~l~~l~~--------~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 84 RLSPGIPELVKKLRA--------RGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred CCCccHHHHHHHHHH--------CCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 467999999999976 36899999999999999999997642 245543332 11100 0001
Q ss_pred --cccccc-cccCcCCCcEEEEeCCCcccccC
Q psy17690 213 --HHVKNL-DLLNRDLKKVIAVDWNTHSLSKN 241 (545)
Q Consensus 213 --~~vKdL-~~L~Rdl~kvIivDd~~~s~~~q 241 (545)
..++.+ ..+| .+++|+|-|+..-...-
T Consensus 156 K~~~i~~~~~~~~--~~~~i~iGDs~~Di~aa 185 (224)
T PLN02954 156 KAEAVQHIKKKHG--YKTMVMIGDGATDLEAR 185 (224)
T ss_pred HHHHHHHHHHHcC--CCceEEEeCCHHHHHhh
Confidence 111111 1223 47899999999877763
No 78
>KOG3109|consensus
Probab=91.43 E-value=0.2 Score=50.29 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=58.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCc---------cceecCccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDS---------TEFVDGHHV 215 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~---------c~~~~g~~v 215 (545)
++.=|-|+.||-.|.+ -+ .++||.+....|..++..|-- -.+|....+-+. |.-....+-
T Consensus 99 LkPD~~LRnlLL~l~~---------r~-k~~FTNa~k~HA~r~Lk~LGi-eDcFegii~~e~~np~~~~~vcKP~~~afE 167 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKK---------RR-KWIFTNAYKVHAIRILKKLGI-EDCFEGIICFETLNPIEKTVVCKPSEEAFE 167 (244)
T ss_pred cCCCHHHHHHHHhCcc---------cc-EEEecCCcHHHHHHHHHHhCh-HHhccceeEeeccCCCCCceeecCCHHHHH
Confidence 5677788999999986 33 899999999999999999854 334444443211 222223333
Q ss_pred ccccccCcC-CCcEEEEeCCCcccc
Q psy17690 216 KNLDLLNRD-LKKVIAVDWNTHSLS 239 (545)
Q Consensus 216 KdL~~L~Rd-l~kvIivDd~~~s~~ 239 (545)
|=....|=+ ..|++.+|||..+..
T Consensus 168 ~a~k~agi~~p~~t~FfDDS~~NI~ 192 (244)
T KOG3109|consen 168 KAMKVAGIDSPRNTYFFDDSERNIQ 192 (244)
T ss_pred HHHHHhCCCCcCceEEEcCchhhHH
Confidence 444445654 899999999997664
No 79
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.34 E-value=0.38 Score=48.08 Aligned_cols=95 Identities=6% Similarity=-0.004 Sum_probs=63.1
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHH--HHHHHhcCCCcee
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIA--PILEALDKENKYF 198 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~--~il~~LDp~~~~i 198 (545)
-.++++|+||||.+. ...-||..++|+.|.+ ..+.++|.|++....+. ..++.+.-....+
T Consensus 8 ~~~~~~D~dG~l~~~---------~~~~pga~e~L~~L~~--------~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~ 70 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG---------NHTYPGAVQNLNKIIA--------QGKPVYFVSNSPRNIFSLHKTLKSLGINADLP 70 (242)
T ss_pred CCEEEEecccccccC---------CccCccHHHHHHHHHH--------CCCEEEEEeCCCCChHHHHHHHHHCCCCcccc
Confidence 347899999999865 2347999999999986 47999999998887766 6777776522255
Q ss_pred eEEEecCccceecCccccc-ccccCcCCCcEEEEeCCC
Q psy17690 199 YFKLFRDSTEFVDGHHVKN-LDLLNRDLKKVIAVDWNT 235 (545)
Q Consensus 199 ~~rl~R~~c~~~~g~~vKd-L~~L~Rdl~kvIivDd~~ 235 (545)
...+....+.. .++.- +..++-+..++++|-|..
T Consensus 71 ~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 71 EMIISSGEIAV---QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred ceEEccHHHHH---HHHHhhhhhccCCCceEEEeCCcc
Confidence 55554433221 12211 233444556778877654
No 80
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=91.30 E-value=0.28 Score=46.56 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=60.0
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCcc-cee-cC-----c----
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDST-EFV-DG-----H---- 213 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c-~~~-~g-----~---- 213 (545)
+..+||+.++|+.+.+ ..+.++|.|++...+++++++.+.. ..+|...+..+.. ... ++ .
T Consensus 79 ~~~~~g~~e~l~~l~~--------~g~~~~IvS~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~ 149 (201)
T TIGR01491 79 ISLRDYAEELVRWLKE--------KGLKTAIVSGGIMCLAKKVAEKLNP-DYVYSNELVFDEKGFIQPDGIVRVTFDNKG 149 (201)
T ss_pred CCCCccHHHHHHHHHH--------CCCEEEEEeCCcHHHHHHHHHHhCC-CeEEEEEEEEcCCCeEecceeeEEccccHH
Confidence 4579999999999975 3799999999999999999999876 4555554433221 111 00 0
Q ss_pred -cc-ccccccCcCCCcEEEEeCCCccccc
Q psy17690 214 -HV-KNLDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 214 -~v-KdL~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
.+ +-+..+|-+.+++|+|.|+..-...
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~ 178 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPM 178 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHH
Confidence 11 1133457788999999999855433
No 81
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=91.30 E-value=0.12 Score=48.48 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=63.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.+.+ ..+.++|-|++ .+++.+++.+.- ..+|...+..+.+.... ..+.+=+..+
T Consensus 87 ~~~~~g~~~~l~~l~~--------~g~~i~i~S~~--~~~~~~l~~~~l-~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~ 155 (185)
T TIGR02009 87 AEVLPGIENFLKRLKK--------KGIAVGLGSSS--KNADRILAKLGL-TDYFDAIVDADEVKEGKPHPETFLLAAELL 155 (185)
T ss_pred CCCCcCHHHHHHHHHH--------cCCeEEEEeCc--hhHHHHHHHcCh-HHHCCEeeehhhCCCCCCChHHHHHHHHHc
Confidence 4678999999999986 36889998887 778999998776 56788777765543321 1234456677
Q ss_pred CcCCCcEEEEeCCCccccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~ 240 (545)
|-+.+++|+|+|+...+..
T Consensus 156 ~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 156 GVSPNECVVFEDALAGVQA 174 (185)
T ss_pred CCCHHHeEEEeCcHhhHHH
Confidence 8889999999999865543
No 82
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=91.28 E-value=0.093 Score=49.72 Aligned_cols=82 Identities=18% Similarity=0.140 Sum_probs=63.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccce-------ecCccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEF-------VDGHHVKN 217 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~-------~~g~~vKd 217 (545)
+...||+.++|+.|. +.++|.|++....+..+++.+.- ..+|...+..+.... ....+.+=
T Consensus 83 ~~~~~g~~~~L~~L~-----------~~~~i~Tn~~~~~~~~~l~~~gl-~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~ 150 (184)
T TIGR01993 83 LKPDPELRNLLLRLP-----------GRKIIFTNGDRAHARRALNRLGI-EDCFDGIFCFDTANPDYLLPKPSPQAYEKA 150 (184)
T ss_pred CCCCHHHHHHHHhCC-----------CCEEEEeCCCHHHHHHHHHHcCc-HhhhCeEEEeecccCccCCCCCCHHHHHHH
Confidence 346789999999987 35899999999999999999876 567887776554332 22234556
Q ss_pred ccccCcCCCcEEEEeCCCccc
Q psy17690 218 LDLLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 218 L~~L~Rdl~kvIivDd~~~s~ 238 (545)
+.++|.+.+++++|+|++...
T Consensus 151 ~~~~~~~~~~~l~vgD~~~di 171 (184)
T TIGR01993 151 LREAGVDPERAIFFDDSARNI 171 (184)
T ss_pred HHHhCCCccceEEEeCCHHHH
Confidence 677899999999999998554
No 83
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=90.98 E-value=0.28 Score=47.90 Aligned_cols=94 Identities=10% Similarity=0.071 Sum_probs=72.9
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecC---cccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g---~~vKdL~~L~ 222 (545)
...||+.++|+.+.+ ..+.++|.|++....++.+++.+.- .++|...+.++....... .+..=+..+|
T Consensus 92 ~~~~g~~~~l~~l~~--------~g~~~~i~S~~~~~~~~~~l~~~~l-~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 162 (222)
T PRK10826 92 PLLPGVREALALCKA--------QGLKIGLASASPLHMLEAVLTMFDL-RDYFDALASAEKLPYSKPHPEVYLNCAAKLG 162 (222)
T ss_pred CCCCCHHHHHHHHHH--------CCCeEEEEeCCcHHHHHHHHHhCcc-hhcccEEEEcccCCCCCCCHHHHHHHHHHcC
Confidence 567999999999985 3799999999999999999999876 677887777665432211 3455667788
Q ss_pred cCCCcEEEEeCCCcccccCCCccccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
-+.+++++|+|+..-...--..|+..
T Consensus 163 ~~~~~~~~igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 163 VDPLTCVALEDSFNGMIAAKAARMRS 188 (222)
T ss_pred CCHHHeEEEcCChhhHHHHHHcCCEE
Confidence 89999999999997776655555554
No 84
>PRK09449 dUMP phosphatase; Provisional
Probab=90.83 E-value=0.33 Score=47.24 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=68.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+.|.+ .+-+.|-|++....+..+++.+.- ..+|...+..+.+.... ..+.+=++.+
T Consensus 94 ~~~~~g~~~~L~~L~~---------~~~~~i~Tn~~~~~~~~~l~~~~l-~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~ 163 (224)
T PRK09449 94 CTPLPGAVELLNALRG---------KVKMGIITNGFTELQQVRLERTGL-RDYFDLLVISEQVGVAKPDVAIFDYALEQM 163 (224)
T ss_pred CccCccHHHHHHHHHh---------CCeEEEEeCCcHHHHHHHHHhCCh-HHHcCEEEEECccCCCCCCHHHHHHHHHHc
Confidence 3568999999999987 699999999999999999999876 56788887777664322 2345567777
Q ss_pred Cc-CCCcEEEEeCCCc-ccccCCCcc
Q psy17690 222 NR-DLKKVIAVDWNTH-SLSKNRENA 245 (545)
Q Consensus 222 ~R-dl~kvIivDd~~~-s~~~qp~N~ 245 (545)
|- +.+++++|+|+.. ....--..|
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG 189 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAG 189 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCC
Confidence 74 5578999999973 443333333
No 85
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=90.63 E-value=0.36 Score=46.12 Aligned_cols=85 Identities=16% Similarity=0.122 Sum_probs=65.4
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCcccee---cCcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~---~g~~vKdL~~L~ 222 (545)
...||+.++|+.+.+ ..|.++|.|++...++..+++.+.- ..+|...+..+..... ...|.+=++.+|
T Consensus 92 ~~~~~~~~~L~~L~~--------~g~~~~i~Sn~~~~~~~~~l~~~gl-~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~ 162 (198)
T TIGR01428 92 PPHPDVPAGLRALKE--------RGYRLAILSNGSPAMLKSLVKHAGL-DDPFDAVLSADAVRAYKPAPQVYQLALEALG 162 (198)
T ss_pred CCCCCHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHCCC-hhhhheeEehhhcCCCCCCHHHHHHHHHHhC
Confidence 567999999999986 3599999999999999999998765 5678777776654322 123445556778
Q ss_pred cCCCcEEEEeCCCcccc
Q psy17690 223 RDLKKVIAVDWNTHSLS 239 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~ 239 (545)
-+.+++|+|+|++..+.
T Consensus 163 ~~p~~~~~vgD~~~Di~ 179 (198)
T TIGR01428 163 VPPDEVLFVASNPWDLG 179 (198)
T ss_pred CChhhEEEEeCCHHHHH
Confidence 89999999999985443
No 86
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=90.08 E-value=0.46 Score=48.27 Aligned_cols=57 Identities=11% Similarity=0.082 Sum_probs=46.3
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+.+++||||||+.++- ...|...+.|+.+.+ ....++|-|.-....+..+++.++-
T Consensus 4 ~kli~~DlDGTLl~~~~--------~~~~~~~~ai~~l~~--------~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT--------YSYEPAKPALKALKE--------KGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC--------cCcHHHHHHHHHHHH--------CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 56899999999997521 234667888999886 4689999999999999999999875
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=89.97 E-value=0.64 Score=48.25 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=60.2
Q ss_pred eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc---CCCceeeEEEecCccceecC---cc---
Q psy17690 144 RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD---KENKYFYFKLFRDSTEFVDG---HH--- 214 (545)
Q Consensus 144 ~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD---p~~~~i~~rl~R~~c~~~~g---~~--- 214 (545)
.+..|||+.+|++.|.+ ....+.|+|+|...+++.+++.+. ++..+++-+|--+......| ..
T Consensus 119 ~l~l~pG~~efl~~L~~--------~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~ 190 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQ--------HSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT 190 (277)
T ss_pred CCccCcCHHHHHHHHHH--------CCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccc
Confidence 47899999999999976 379999999999999999999753 33355555554322112222 11
Q ss_pred -cc-------cccccC--cCCCcEEEEeCCCccccc
Q psy17690 215 -VK-------NLDLLN--RDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 215 -vK-------dL~~L~--Rdl~kvIivDd~~~s~~~ 240 (545)
-| ..+.++ .+.++||+|-|+..-..+
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~m 226 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRM 226 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEECcChhhhhH
Confidence 11 222334 677889999988865443
No 88
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=89.65 E-value=0.58 Score=46.99 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=49.9
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKEN 195 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~ 195 (545)
.+.|++||||||+.++. ...|...+-|+.+.+ ....++|-|.-+...+.++++.|....
T Consensus 3 ~kli~~DlDGTLl~~~~--------~i~~~~~~al~~~~~--------~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK--------TISPETKEALARLRE--------KGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred eeEEEEcCCCCccCCCC--------ccCHHHHHHHHHHHH--------CCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 56899999999998843 278888999998854 379999999999999999999998743
No 89
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=88.59 E-value=0.52 Score=47.82 Aligned_cols=60 Identities=13% Similarity=0.259 Sum_probs=45.2
Q ss_pred CCCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.|+++.+++||||||++++- ..-|-..+-|+.+.+ ....+||-|.-+...+.++++.|..
T Consensus 4 ~~~~~lI~~DlDGTLL~~~~--------~i~~~~~~ai~~l~~--------~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 4 LQDPLLIFTDLDGTLLDSHT--------YDWQPAAPWLTRLRE--------AQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred cCCCeEEEEeCccCCcCCCC--------cCcHHHHHHHHHHHH--------cCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 36788999999999998631 112334455777765 3689999999998889999999865
No 90
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=88.52 E-value=0.75 Score=46.96 Aligned_cols=110 Identities=22% Similarity=0.271 Sum_probs=70.6
Q ss_pred CCeEEEEeCCCeeEeec-cccCcce-----------------------------------eeeeCCChhHHHHhhcCCCC
Q psy17690 120 PPYTLLLEFRDLLVHPE-WTYNTGW-----------------------------------RFKKRPFVDDFFETLNGSTT 163 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~-~~~~~g~-----------------------------------~~~kRPgld~FL~~ls~~~~ 163 (545)
....||+|+|+||+-+. .-...+| ....=|.+..++..+.+
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~--- 95 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQN--- 95 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHH---
Confidence 35688999999999874 1111111 12445677788888886
Q ss_pred CCCCCCceEEEEEcCCChhcHHHHHHHhcC-----------CCceeeEEEecCcc----ceecCcc-----------ccc
Q psy17690 164 DRNNVPLFEVVIFTSESGLSIAPILEALDK-----------ENKYFYFKLFRDST----EFVDGHH-----------VKN 217 (545)
Q Consensus 164 ~~~~~~~yEivIfTa~~~~ya~~il~~LDp-----------~~~~i~~rl~R~~c----~~~~g~~-----------vKd 217 (545)
...-|+..|+....+...-++.|-. ..+++.+-.+...| .+.+|.. ..=
T Consensus 96 -----~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~f 170 (252)
T PF11019_consen 96 -----KGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYF 170 (252)
T ss_pred -----CCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHH
Confidence 3688999999999999988888732 12233222121111 2233321 234
Q ss_pred ccccCcCCCcEEEEeCCCcc
Q psy17690 218 LDLLNRDLKKVIAVDWNTHS 237 (545)
Q Consensus 218 L~~L~Rdl~kvIivDd~~~s 237 (545)
|..+|+..++||+|||+..+
T Consensus 171 L~~~~~~pk~IIfIDD~~~n 190 (252)
T PF11019_consen 171 LDKINQSPKKIIFIDDNKEN 190 (252)
T ss_pred HHHcCCCCCeEEEEeCCHHH
Confidence 56679999999999999853
No 91
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=88.27 E-value=0.74 Score=45.84 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=42.2
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++||||||++... .-|...++|+.+.+ ....+++.|+-+...+..+++.+.-
T Consensus 2 i~~DlDGTLl~~~~---------~~~~~~~ai~~l~~--------~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLPPGY---------EPGPAREALEELKD--------LGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcCCCC---------CchHHHHHHHHHHH--------CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 68999999998521 23567889998886 3689999999888888888888864
No 92
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.10 E-value=0.82 Score=39.98 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=40.4
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD 192 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD 192 (545)
+++||||||.+-. ..=||..+|++.+.. ....+++.|.++......++++|.
T Consensus 1 ~l~D~dGvl~~g~---------~~ipga~e~l~~L~~--------~g~~~~~lTNns~~s~~~~~~~L~ 52 (101)
T PF13344_consen 1 FLFDLDGVLYNGN---------EPIPGAVEALDALRE--------RGKPVVFLTNNSSRSREEYAKKLK 52 (101)
T ss_dssp EEEESTTTSEETT---------EE-TTHHHHHHHHHH--------TTSEEEEEES-SSS-HHHHHHHHH
T ss_pred CEEeCccEeEeCC---------CcCcCHHHHHHHHHH--------cCCCEEEEeCCCCCCHHHHHHHHH
Confidence 5899999999741 345999999999987 469999999999887777777764
No 93
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=87.17 E-value=0.95 Score=44.05 Aligned_cols=56 Identities=7% Similarity=0.012 Sum_probs=44.8
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+.+++||||||+..+ + ..-|...+-|+.+.+ ....++|-|.-+...+.++++.|+.
T Consensus 2 k~v~~DlDGTLl~~~-----~---~i~~~~~~~i~~l~~--------~g~~~~~~TGR~~~~~~~~~~~l~~ 57 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN-----R---MISERAIEAIRKAEK--------KGIPVSLVTGNTVPFARALAVLIGT 57 (215)
T ss_pred cEEEEecCCCcCCCC-----c---ccCHHHHHHHHHHHH--------CCCEEEEEcCCcchhHHHHHHHhCC
Confidence 478999999999642 1 355666777888875 3689999999999999999999977
No 94
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=87.03 E-value=0.85 Score=45.53 Aligned_cols=94 Identities=13% Similarity=0.042 Sum_probs=69.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCcee-eEEEecCccceec---Ccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYF-YFKLFRDSTEFVD---GHHVKNLDL 220 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i-~~rl~R~~c~~~~---g~~vKdL~~ 220 (545)
+...||+.++|++|.+ ..+.+.|-|++...+++.+++.+.- .++| ...+..+.+.... ..+.+=+.+
T Consensus 98 ~~~~pg~~e~L~~L~~--------~g~~l~IvT~~~~~~~~~~l~~~gl-~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~ 168 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRA--------RGIKIGSTTGYTREMMDVVAPEAAL-QGYRPDYNVTTDDVPAGRPAPWMALKNAIE 168 (253)
T ss_pred CccCCCHHHHHHHHHH--------CCCeEEEECCCcHHHHHHHHHHHHh-cCCCCceEEccccCCCCCCCHHHHHHHHHH
Confidence 4568999999999976 3699999999999999999999876 4554 6666666543221 134566677
Q ss_pred cCc-CCCcEEEEeCCCcccccCCCcccc
Q psy17690 221 LNR-DLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 221 L~R-dl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
+|- +.+++|+|.|++.-+..--..|+.
T Consensus 169 l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 169 LGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred cCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 786 489999999999766554444443
No 95
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=87.02 E-value=0.81 Score=43.84 Aligned_cols=80 Identities=13% Similarity=0.091 Sum_probs=59.3
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
..-||+.++|.+|.+ ..+.++|.|++... +..+++.+.- ..+|...+..+.+.... ..+.+=++.+|
T Consensus 105 ~~~~g~~~~l~~L~~--------~g~~~~i~Sn~~~~-~~~~l~~~~l-~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~ 174 (203)
T TIGR02252 105 QVYPDAIKLLKDLRE--------RGLILGVISNFDSR-LRGLLEALGL-LEYFDFVVTSYEVGAEKPDPKIFQEALERAG 174 (203)
T ss_pred eeCcCHHHHHHHHHH--------CCCEEEEEeCCchh-HHHHHHHCCc-HHhcceEEeecccCCCCCCHHHHHHHHHHcC
Confidence 567999999999985 36999999998765 4777877765 55777766655543322 12455667778
Q ss_pred cCCCcEEEEeCCC
Q psy17690 223 RDLKKVIAVDWNT 235 (545)
Q Consensus 223 Rdl~kvIivDd~~ 235 (545)
-+.+++|+|+|+.
T Consensus 175 ~~~~~~~~IgD~~ 187 (203)
T TIGR02252 175 ISPEEALHIGDSL 187 (203)
T ss_pred CChhHEEEECCCc
Confidence 8999999999986
No 96
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=86.88 E-value=1 Score=43.16 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=62.7
Q ss_pred eCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCcccee--cCcccccccccCcC
Q psy17690 147 KRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFV--DGHHVKNLDLLNRD 224 (545)
Q Consensus 147 kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~--~g~~vKdL~~L~Rd 224 (545)
..|+..++|+.+.+ ..+.+.|-|++...++..+++.+.- ..+|...+..+..... ...+.+-+..+|-+
T Consensus 107 ~~~~~~~~L~~l~~--------~g~~~~i~T~~~~~~~~~~l~~~gl-~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 177 (197)
T TIGR01548 107 TLLTPKGLLRELHR--------APKGMAVVTGRPRKDAAKFLTTHGL-EILFPVQIWMEDCPPKPNPEPLILAAKALGVE 177 (197)
T ss_pred cccCHHHHHHHHHH--------cCCcEEEECCCCHHHHHHHHHHcCc-hhhCCEEEeecCCCCCcCHHHHHHHHHHhCcC
Confidence 45677999999986 3699999999999999999999876 5778877776654321 11244556667888
Q ss_pred CCcEEEEeCCCc
Q psy17690 225 LKKVIAVDWNTH 236 (545)
Q Consensus 225 l~kvIivDd~~~ 236 (545)
.+++|+|.|++.
T Consensus 178 ~~~~i~vGD~~~ 189 (197)
T TIGR01548 178 ACHAAMVGDTVD 189 (197)
T ss_pred cccEEEEeCCHH
Confidence 899999999874
No 97
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=86.84 E-value=0.38 Score=46.35 Aligned_cols=97 Identities=11% Similarity=0.009 Sum_probs=67.6
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh-cCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL-DKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L-Dp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
..+||+.++|+.+.+ ..+.++|-|++....+..++... .- ..+|...+..+.+.... ..|..=++.+
T Consensus 84 ~~~~g~~e~L~~l~~--------~g~~~~i~Sn~~~~~~~~~~~~~~~l-~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~ 154 (199)
T PRK09456 84 ALRPEVIAIMHKLRE--------QGHRVVVLSNTNRLHTTFWPEEYPEV-RAAADHIYLSQDLGMRKPEARIYQHVLQAE 154 (199)
T ss_pred ccCHHHHHHHHHHHh--------CCCcEEEEcCCchhhHHHHHhhchhH-HHhcCEEEEecccCCCCCCHHHHHHHHHHc
Confidence 468999999999975 36999999999877766554432 22 34677766666554432 2345667778
Q ss_pred CcCCCcEEEEeCCCcccccCCCccccccCC
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENALIIPRW 251 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I~I~~~ 251 (545)
|-+.+++|+|||++..+..=-..|+..--+
T Consensus 155 ~~~p~~~l~vgD~~~di~aA~~aG~~~i~~ 184 (199)
T PRK09456 155 GFSAADAVFFDDNADNIEAANALGITSILV 184 (199)
T ss_pred CCChhHeEEeCCCHHHHHHHHHcCCEEEEe
Confidence 999999999999987765545555554333
No 98
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=86.54 E-value=1.3 Score=43.38 Aligned_cols=46 Identities=13% Similarity=0.270 Sum_probs=39.2
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCcee
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYF 198 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i 198 (545)
+..|||+.+||+.+.+ ....++|.|++...+++++++.+.....++
T Consensus 69 ~~l~pg~~e~l~~l~~--------~g~~~~IvS~~~~~~i~~il~~~~~~~~i~ 114 (214)
T TIGR03333 69 AEIREGFREFVAFINE--------HGIPFYVISGGMDFFVYPLLEGIVEKDRIY 114 (214)
T ss_pred CcccccHHHHHHHHHH--------CCCeEEEECCCcHHHHHHHHHhhCCcccEE
Confidence 5799999999999986 469999999999999999999986533333
No 99
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=86.48 E-value=0.45 Score=45.90 Aligned_cols=54 Identities=20% Similarity=0.221 Sum_probs=43.5
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
|++||||||+++... .-|...+.|+.+.+ ....++|-|.-....+.++++.+.-
T Consensus 1 i~~DlDGTLl~~~~~--------i~~~~~~al~~l~~--------~g~~~~i~TGR~~~~~~~~~~~~~~ 54 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK--------ISPETIEALKELQE--------KGIKLVIATGRSYSSIKRLLKELGI 54 (254)
T ss_dssp EEEECCTTTCSTTSS--------SCHHHHHHHHHHHH--------TTCEEEEECSSTHHHHHHHHHHTTH
T ss_pred cEEEECCceecCCCe--------eCHHHHHHHHhhcc--------cceEEEEEccCcccccccccccccc
Confidence 689999999996322 44667788888875 3799999999999999999997754
No 100
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=86.34 E-value=0.91 Score=42.89 Aligned_cols=59 Identities=8% Similarity=0.152 Sum_probs=42.3
Q ss_pred EEEeCCCeeEeeccc----cCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHH---HHHHHh
Q psy17690 124 LLLEFRDLLVHPEWT----YNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIA---PILEAL 191 (545)
Q Consensus 124 LVLDLDeTLvhs~~~----~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~---~il~~L 191 (545)
+++|+||||+.++-. .-.|-. ...|++.++++.+.+ ..|.+++-|+.....+. +.++.+
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~-~~~~~~~~a~~~l~~--------~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKD-WTHPGVAKLYRDIQN--------NGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccccccccccC-cCCHHHHHHHHHHHH--------cCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 789999999988511 001101 357999999999986 36889998988877775 556554
No 101
>PRK10444 UMP phosphatase; Provisional
Probab=85.50 E-value=1.6 Score=44.20 Aligned_cols=54 Identities=11% Similarity=0.229 Sum_probs=45.9
Q ss_pred EEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 123 TLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 123 tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
++++||||||++.. ..=|+..++++.+.+ ....+++-|.........++++|..
T Consensus 3 ~v~~DlDGtL~~~~---------~~~p~a~~~l~~L~~--------~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 3 NVICDIDGVLMHDN---------VAVPGAAEFLHRILD--------KGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred EEEEeCCCceEeCC---------eeCccHHHHHHHHHH--------CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 78999999999873 236899999999986 3689999999999888988888854
No 102
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=85.19 E-value=1.3 Score=43.24 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=42.3
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++||||||+.++- ..-|-..+.|..+.+ ....++|-|.-+...+.++++.+.-
T Consensus 2 i~~DlDGTLL~~~~--------~~~~~~~~~l~~l~~--------~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 2 VFSDLDGTLLDSHS--------YDWQPAAPWLTRLQE--------AGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred EEEeCCCCCcCCCC--------CCcHHHHHHHHHHHH--------CCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 78999999998731 112225678888875 3699999999999999999999864
No 103
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=84.77 E-value=0.69 Score=44.65 Aligned_cols=94 Identities=15% Similarity=-0.002 Sum_probs=61.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhc--HHHHHHHhcCCCceeeEEEecCcccee---cCccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLS--IAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLD 219 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~y--a~~il~~LDp~~~~i~~rl~R~~c~~~---~g~~vKdL~ 219 (545)
+...||+.++|+.|.+ ..+.++|.|++.... +...+..++- ..+|.+.+..+.+... ...|.+-++
T Consensus 93 ~~~~~~~~~~L~~L~~--------~g~~l~i~Sn~~~~~~~~~~~~~~~~l-~~~fd~v~~s~~~~~~KP~p~~~~~~~~ 163 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRA--------KGFKTACITNNFPTDHSAEEALLPGDI-MALFDAVVESCLEGLRKPDPRIYQLMLE 163 (211)
T ss_pred cccChhHHHHHHHHHH--------CCCeEEEEeCCCCccchhhhHhhhhhh-HhhCCEEEEeeecCCCCCCHHHHHHHHH
Confidence 4678999999999985 369999999987654 2222222222 3456666654443321 223456667
Q ss_pred ccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 220 LLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 220 ~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
++|-+.+++|+|||+......--..|+.
T Consensus 164 ~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 164 RLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 7888999999999988766544444444
No 104
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=84.74 E-value=0.64 Score=47.99 Aligned_cols=94 Identities=12% Similarity=0.093 Sum_probs=65.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc--CCCceeeEEEecCccceec---Cccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD--KENKYFYFKLFRDSTEFVD---GHHVKNLD 219 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD--p~~~~i~~rl~R~~c~~~~---g~~vKdL~ 219 (545)
+...||+.++|+.+.+ ..+.+.|-|++...++..+++.+. .....|... ..+.+.... ..+.+=+.
T Consensus 143 ~~l~pGv~elL~~L~~--------~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~ 213 (286)
T PLN02779 143 LPLRPGVLRLMDEALA--------AGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAE 213 (286)
T ss_pred CCchhhHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHH
Confidence 4678999999999986 379999999999999999998763 112223322 344332211 13445566
Q ss_pred ccCcCCCcEEEEeCCCcccccCCCcccc
Q psy17690 220 LLNRDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 220 ~L~Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
.+|-+.+++|+|+|+...+..--.+|+.
T Consensus 214 ~~~~~p~~~l~IGDs~~Di~aA~~aG~~ 241 (286)
T PLN02779 214 TLGVDPSRCVVVEDSVIGLQAAKAAGMR 241 (286)
T ss_pred HhCcChHHEEEEeCCHHhHHHHHHcCCE
Confidence 7788899999999999776654455543
No 105
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=83.92 E-value=2.2 Score=42.65 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=43.0
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+.+++||||||+.++- ...|...+-|..+.+ ....++|-|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~--------~i~~~~~~ai~~~~~--------~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK--------TILPESLEALARARE--------AGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC--------ccCHHHHHHHHHHHH--------CCCEEEEEcCCChHHHHHHHHhcCC
Confidence 35899999999997631 234455666777765 3688999998888888889998876
No 106
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=83.85 E-value=1.8 Score=42.13 Aligned_cols=56 Identities=4% Similarity=-0.021 Sum_probs=43.0
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+.+++||||||+.++- ...|...+-|..+.+ ....++|-|.-+...+.++++.+..
T Consensus 4 kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~--------~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (230)
T PRK01158 4 KAIAIDIDGTITDKDR--------RLSLKAVEAIRKAEK--------LGIPVILATGNVLCFARAAAKLIGT 59 (230)
T ss_pred eEEEEecCCCcCCCCC--------ccCHHHHHHHHHHHH--------CCCEEEEEcCCchHHHHHHHHHhCC
Confidence 5889999999996521 245566667777764 2578999999888888888888875
No 107
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=83.83 E-value=1.5 Score=43.94 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=42.4
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++||||||++.+- ..-+...+.++.+.+ ....+++-|.-....+..+++.+..
T Consensus 2 i~~DlDGTll~~~~--------~~~~~~~~~i~~l~~--------~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 2 IFTDLDGTLLDPHG--------YDWGPAKEVLERLQE--------LGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred EEEcCCCCCcCCCC--------cCchHHHHHHHHHHH--------CCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 78999999998742 122346788888886 3688999998888889999998864
No 108
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=83.79 E-value=1.6 Score=43.65 Aligned_cols=54 Identities=17% Similarity=0.270 Sum_probs=43.2
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++||||||+..+- ...|...+.|+.+.+ ....++|-|..+...+..+++.+..
T Consensus 2 i~~DlDGTLl~~~~--------~i~~~~~~~i~~l~~--------~G~~~~iaTGR~~~~~~~~~~~~~~ 55 (256)
T TIGR00099 2 IFIDLDGTLLNDDH--------TISPSTKEALAKLRE--------KGIKVVLATGRPYKEVKNILKELGL 55 (256)
T ss_pred EEEeCCCCCCCCCC--------ccCHHHHHHHHHHHH--------CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 78999999998621 244566778888876 3699999999998888899988865
No 109
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=83.70 E-value=2 Score=43.45 Aligned_cols=93 Identities=12% Similarity=0.008 Sum_probs=67.6
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCce-eeEEEecCccceec---Cccccccccc
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKY-FYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~-i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
..-||+.++|+.|.+ ..+.+.|-|++....+..+++.+.- .++ +...+..+++.... ..+.+=+.++
T Consensus 101 ~~~pg~~elL~~L~~--------~g~~l~I~T~~~~~~~~~~l~~~~l-~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l 171 (267)
T PRK13478 101 TPIPGVLEVIAALRA--------RGIKIGSTTGYTREMMDVVVPLAAA-QGYRPDHVVTTDDVPAGRPYPWMALKNAIEL 171 (267)
T ss_pred CCCCCHHHHHHHHHH--------CCCEEEEEcCCcHHHHHHHHHHHhh-cCCCceEEEcCCcCCCCCCChHHHHHHHHHc
Confidence 457999999999975 3699999999999999999998765 334 46666666543221 2345666777
Q ss_pred CcC-CCcEEEEeCCCcccccCCCcccc
Q psy17690 222 NRD-LKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 222 ~Rd-l~kvIivDd~~~s~~~qp~N~I~ 247 (545)
|-+ .+.+|+|+|++.-+..--..|+.
T Consensus 172 ~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 172 GVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred CCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 854 68999999999766554445543
No 110
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=83.20 E-value=1.2 Score=42.88 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=58.0
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceE--EEEEcCCC-------hhcHHHHHH
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFE--VVIFTSES-------GLSIAPILE 189 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yE--ivIfTa~~-------~~ya~~il~ 189 (545)
.+=+.||+|+|+||+.+.- -..-|-+.+.++++.+ .+.+ |+|.|.+. ..-|+.+-+
T Consensus 39 ~Gik~li~DkDNTL~~~~~-------~~i~~~~~~~~~~l~~--------~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~ 103 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYE-------DEIPPEYAEWLNELKK--------QFGKDRVLIVSNSAGSSDDPDGERAEALEK 103 (168)
T ss_pred cCceEEEEcCCCCCCCCCc-------CcCCHHHHHHHHHHHH--------HCCCCeEEEEECCCCcccCccHHHHHHHHH
Confidence 4567899999999987632 2455677888888886 2454 99999984 455677777
Q ss_pred HhcCCCceeeEEEecCccceecCccccccccc-----CcCCCcEEEEeCCC
Q psy17690 190 ALDKENKYFYFKLFRDSTEFVDGHHVKNLDLL-----NRDLKKVIAVDWNT 235 (545)
Q Consensus 190 ~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L-----~Rdl~kvIivDd~~ 235 (545)
.|.- ..+.|+ +..- |.+-+=++.+ .-..+++++|-|.-
T Consensus 104 ~lgI--pvl~h~-----~kKP-~~~~~i~~~~~~~~~~~~p~eiavIGDrl 146 (168)
T PF09419_consen 104 ALGI--PVLRHR-----AKKP-GCFREILKYFKCQKVVTSPSEIAVIGDRL 146 (168)
T ss_pred hhCC--cEEEeC-----CCCC-ccHHHHHHHHhhccCCCCchhEEEEcchH
Confidence 7753 233333 3222 2211111222 23577888887753
No 111
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=82.85 E-value=1.2 Score=45.39 Aligned_cols=69 Identities=19% Similarity=0.339 Sum_probs=45.6
Q ss_pred CCCeEEEEeCCCeeEeec------------cccCccee-------eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCC
Q psy17690 119 QPPYTLLLEFRDLLVHPE------------WTYNTGWR-------FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE 179 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~------------~~~~~g~~-------~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~ 179 (545)
.+++.+|||||||++... |+++ +|. -+.=||.-+||+++.+
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe-~Wd~wV~a~~sk~vpGA~eFl~Yvn~------------------- 136 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPE-TWDKWVQAKKSKAVPGAVEFLNYVNS------------------- 136 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCcc-chHHHHhhcccccCccHHHHHHHHHh-------------------
Confidence 345699999999999852 1111 221 3556999999999986
Q ss_pred ChhcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccC
Q psy17690 180 SGLSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLN 222 (545)
Q Consensus 180 ~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~ 222 (545)
+++.|.|.=-|+...-.+| .++||..+|
T Consensus 137 --------------~Gg~ifyiSNR~~~~~~~~-T~~nLk~~g 164 (274)
T COG2503 137 --------------NGGKIFYISNRDQENEKDG-TIENLKSEG 164 (274)
T ss_pred --------------cCcEEEEEeccchhcccch-hHHHHHHcC
Confidence 1556666656666654444 377887665
No 112
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=82.84 E-value=0.89 Score=42.56 Aligned_cols=84 Identities=11% Similarity=0.130 Sum_probs=59.2
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccce---ecCcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEF---VDGHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~---~~g~~vKdL~~L~ 222 (545)
...||+.++|+.|.+ ..+.+.|-|++. .+..+++.+.- ..+|.+.+..+.-.. ....+.+=+.+++
T Consensus 87 ~~~pg~~~~L~~L~~--------~g~~~~i~s~~~--~~~~~l~~~~l-~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~ 155 (185)
T TIGR01990 87 DVLPGIKNLLDDLKK--------NNIKIALASASK--NAPTVLEKLGL-IDYFDAIVDPAEIKKGKPDPEIFLAAAEGLG 155 (185)
T ss_pred ccCccHHHHHHHHHH--------CCCeEEEEeCCc--cHHHHHHhcCc-HhhCcEEEehhhcCCCCCChHHHHHHHHHcC
Confidence 467999999999986 368999988764 46778888876 567777665443211 1112455666778
Q ss_pred cCCCcEEEEeCCCccccc
Q psy17690 223 RDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~ 240 (545)
-+.+++|+|+|++..+..
T Consensus 156 ~~~~~~v~vgD~~~di~a 173 (185)
T TIGR01990 156 VSPSECIGIEDAQAGIEA 173 (185)
T ss_pred CCHHHeEEEecCHHHHHH
Confidence 889999999999865543
No 113
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=82.65 E-value=2.6 Score=40.76 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=63.6
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCcee
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYF 198 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i 198 (545)
++-+.+++|||+|||-= +.. ..=|-+.+-+..+.. ..--++|.|..+..=+..++..||- . +|
T Consensus 26 ~Gikgvi~DlDNTLv~w--d~~-----~~tpe~~~W~~e~k~--------~gi~v~vvSNn~e~RV~~~~~~l~v-~-fi 88 (175)
T COG2179 26 HGIKGVILDLDNTLVPW--DNP-----DATPELRAWLAELKE--------AGIKVVVVSNNKESRVARAAEKLGV-P-FI 88 (175)
T ss_pred cCCcEEEEeccCceecc--cCC-----CCCHHHHHHHHHHHh--------cCCEEEEEeCCCHHHHHhhhhhcCC-c-ee
Confidence 57789999999999953 222 223566777778875 4689999999998889999999986 1 11
Q ss_pred eEEEecCccceecCcccccccccCcCCCcEEEEeCCC
Q psy17690 199 YFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNT 235 (545)
Q Consensus 199 ~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~ 235 (545)
+| +..-..-.+-|-|..+|-+.++|++|=|.-
T Consensus 89 ----~~-A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 89 ----YR-AKKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred ----ec-ccCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 11 111111223455666677778888886653
No 114
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=82.60 E-value=1.7 Score=41.97 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=67.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
..--|++.++|..+.+ .|.++|.|.+...++...+..+-- ..+|...+..+.+.... -.|-.=+..+
T Consensus 98 ~~~~~~~~~~L~~l~~---------~~~l~ilTNg~~~~~~~~l~~~gl-~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~ 167 (229)
T COG1011 98 LPDYPEALEALKELGK---------KYKLGILTNGARPHQERKLRQLGL-LDYFDAVFISEDVGVAKPDPEIFEYALEKL 167 (229)
T ss_pred CccChhHHHHHHHHHh---------hccEEEEeCCChHHHHHHHHHcCC-hhhhheEEEecccccCCCCcHHHHHHHHHc
Confidence 4567889999999997 599999999999999999999864 67888888877776432 2345567777
Q ss_pred CcCCCcEEEEeCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~ 238 (545)
|-+.+++++|||+..+-
T Consensus 168 g~~p~~~l~VgD~~~~d 184 (229)
T COG1011 168 GVPPEEALFVGDSLEND 184 (229)
T ss_pred CCCcceEEEECCChhhh
Confidence 88899999999999766
No 115
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=82.25 E-value=2.6 Score=48.84 Aligned_cols=60 Identities=12% Similarity=-0.020 Sum_probs=44.2
Q ss_pred CCCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+.++.+++||||||++++- .+.. ...+-|+.+.+ ....+++-|+-+...+..+++.|+.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~------~i~~--~t~eAL~~L~e--------kGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT------YSYS--TALDALRLLKD--------KELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred CceeeEEEEECcCCCcCCCC------ccCH--HHHHHHHHHHH--------cCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 56788999999999998732 1111 23345666654 3689999999998889999998875
No 116
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=81.90 E-value=1.4 Score=42.36 Aligned_cols=54 Identities=24% Similarity=0.316 Sum_probs=42.2
Q ss_pred EEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 123 TLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 123 tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
.|++|+||||+.+.- ....|.+.+-|+.+.+ ....++|-|......+..+++.+
T Consensus 1 li~~D~DgTL~~~~~-------~~~~~~~~~~l~~l~~--------~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA-------HELSPETIEALERLRE--------AGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred CEEEeCcCCCcCCCC-------CcCCHHHHHHHHHHHH--------CCCEEEEECCCCHHHHHHHHHhC
Confidence 378999999997520 1345778888888886 24789999999999999988874
No 117
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=81.23 E-value=1.8 Score=43.35 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=43.7
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+.+++||||||++++- ..-|...+-|+.+.+ ....++|-|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~--------~i~~~~~~ai~~l~~--------~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH--------TISPAVKQAIAAARA--------KGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC--------ccCHHHHHHHHHHHH--------CCCEEEEecCCChHHHHHHHHHhCC
Confidence 46889999999998732 234445667777765 3689999999988889999998865
No 118
>PLN02645 phosphoglycolate phosphatase
Probab=80.93 E-value=2.6 Score=43.94 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=45.2
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.++++|+||||++.. .+ . ||..++|+.+.+ ....+++-|+.+......+++.|..
T Consensus 29 ~~~~~D~DGtl~~~~-------~~-~-~ga~e~l~~lr~--------~g~~~~~~TN~~~~~~~~~~~~l~~ 83 (311)
T PLN02645 29 ETFIFDCDGVIWKGD-------KL-I-EGVPETLDMLRS--------MGKKLVFVTNNSTKSRAQYGKKFES 83 (311)
T ss_pred CEEEEeCcCCeEeCC-------cc-C-cCHHHHHHHHHH--------CCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 489999999998752 12 2 999999999986 4799999999998888888887754
No 119
>PTZ00445 p36-lilke protein; Provisional
Probab=80.56 E-value=1.7 Score=43.56 Aligned_cols=122 Identities=11% Similarity=0.113 Sum_probs=71.5
Q ss_pred CCCeEEEEeCCCeeEeeccccCccee----------eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhc-----
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWR----------FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLS----- 183 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~----------~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~y----- 183 (545)
.+-+++++|||.|||--. ..||. -..||.+..++..|.+ ..+-|+|-|-|.+..
T Consensus 41 ~GIk~Va~D~DnTlI~~H---sgG~~~~~~~~~~~~~~~tpefk~~~~~l~~--------~~I~v~VVTfSd~~~~~~~~ 109 (219)
T PTZ00445 41 CGIKVIASDFDLTMITKH---SGGYIDPDNDDIRVLTSVTPDFKILGKRLKN--------SNIKISVVTFSDKELIPSEN 109 (219)
T ss_pred cCCeEEEecchhhhhhhh---cccccCCCcchhhhhccCCHHHHHHHHHHHH--------CCCeEEEEEccchhhccccC
Confidence 456799999999998521 12332 2479999999999986 378888888777644
Q ss_pred ------HHHHHHH-hcCCC---ceee-E----EEecCccceecCc----------c--cccccccCcCCCcEEEEeCCCc
Q psy17690 184 ------IAPILEA-LDKEN---KYFY-F----KLFRDSTEFVDGH----------H--VKNLDLLNRDLKKVIAVDWNTH 236 (545)
Q Consensus 184 ------a~~il~~-LDp~~---~~i~-~----rl~R~~c~~~~g~----------~--vKdL~~L~Rdl~kvIivDd~~~ 236 (545)
...+++. |+-.+ .+.. | +++.+.-.|..-+ | -+=+++.|-+.+.++.|||++.
T Consensus 110 ~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~ 189 (219)
T PTZ00445 110 RPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMN 189 (219)
T ss_pred CcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHH
Confidence 2333333 22111 1111 1 1223322221111 1 2234455889999999999998
Q ss_pred ccccCCCccccccCC
Q psy17690 237 SLSKNRENALIIPRW 251 (545)
Q Consensus 237 s~~~qp~N~I~I~~~ 251 (545)
++..--.-|+..--+
T Consensus 190 NVeaA~~lGi~ai~f 204 (219)
T PTZ00445 190 NCKNALKEGYIALHV 204 (219)
T ss_pred HHHHHHHCCCEEEEc
Confidence 775544444443333
No 120
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=80.53 E-value=1.9 Score=43.08 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=62.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC--CceeeEEEecCccce-ecCccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE--NKYFYFKLFRDSTEF-VDGHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~--~~~i~~rl~R~~c~~-~~g~~vKdL~~L 221 (545)
....|++.++|+++.+ ..+.+.|+|+++......+++..+.. ..+|...+....|.. ....|.+=+..+
T Consensus 94 ~~lypgv~e~L~~Lk~--------~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~l 165 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQ--------LGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQL 165 (220)
T ss_pred cCcCcCHHHHHHHHHH--------CCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHh
Confidence 4688999999999976 47999999999998888888775310 223443222111211 122355667778
Q ss_pred CcCCCcEEEEeCCCcccccCCCccc
Q psy17690 222 NRDLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~s~~~qp~N~I 246 (545)
|-+.+++++|+|+......--..|+
T Consensus 166 gv~p~e~lfVgDs~~Di~AA~~AG~ 190 (220)
T TIGR01691 166 GSPPREILFLSDIINELDAARKAGL 190 (220)
T ss_pred CcChhHEEEEeCCHHHHHHHHHcCC
Confidence 8899999999999865443333333
No 121
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=80.40 E-value=2.9 Score=43.89 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=40.9
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+.+++||||||+.++. +.-+-..+-|+.+.+ ....||+-|+-+..-+..+++.|.-
T Consensus 2 KLIftDLDGTLLd~~~--------~~~~~a~~aL~~Lk~--------~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF--------NSYGAARQALAALER--------RSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred cEEEEeCCCCCcCCCC--------cCCHHHHHHHHHHHH--------CCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 5789999999998632 111224555677765 3689999999988888888888865
No 122
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=80.31 E-value=1.5 Score=42.56 Aligned_cols=93 Identities=9% Similarity=0.066 Sum_probs=65.5
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceee-EEEecCcccee---cCcccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFY-FKLFRDSTEFV---DGHHVKNLDL 220 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~-~rl~R~~c~~~---~g~~vKdL~~ 220 (545)
....||+.++|+.+. +.+.|.|++...+++.+++.++- ..+|. ..+..++.... ...+.+=+.+
T Consensus 87 ~~~~~gv~~~L~~L~-----------~~~~ivTn~~~~~~~~~l~~~~l-~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~ 154 (221)
T PRK10563 87 LEPIAGANALLESIT-----------VPMCVVSNGPVSKMQHSLGKTGM-LHYFPDKLFSGYDIQRWKPDPALMFHAAEA 154 (221)
T ss_pred CCcCCCHHHHHHHcC-----------CCEEEEeCCcHHHHHHHHHhcCh-HHhCcceEeeHHhcCCCCCChHHHHHHHHH
Confidence 456799999999984 68999999999999999988766 55664 44444333211 1234455667
Q ss_pred cCcCCCcEEEEeCCCcccccCCCcccccc
Q psy17690 221 LNRDLKKVIAVDWNTHSLSKNRENALIIP 249 (545)
Q Consensus 221 L~Rdl~kvIivDd~~~s~~~qp~N~I~I~ 249 (545)
+|-..+++|+|+|++.....--..|+.+-
T Consensus 155 ~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 155 MNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred cCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 78888999999999976655445555543
No 123
>PRK10976 putative hydrolase; Provisional
Probab=80.26 E-value=2.5 Score=42.31 Aligned_cols=56 Identities=14% Similarity=0.288 Sum_probs=42.3
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+.+++||||||+.++- ..-|...+=+..+.+ ....++|-|.-....+.++++.|+.
T Consensus 3 kli~~DlDGTLl~~~~--------~is~~~~~ai~~l~~--------~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (266)
T PRK10976 3 QVVASDLDGTLLSPDH--------TLSPYAKETLKLLTA--------RGIHFVFATGRHHVDVGQIRDNLEI 58 (266)
T ss_pred eEEEEeCCCCCcCCCC--------cCCHHHHHHHHHHHH--------CCCEEEEEcCCChHHHHHHHHhcCC
Confidence 5889999999997731 133445566666665 3689999999888888889988876
No 124
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=79.74 E-value=5.2 Score=39.14 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=80.6
Q ss_pred CeEEEEeCCCeeEeeccccCcce-eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCCh----hcH--------HHH
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGW-RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG----LSI--------API 187 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~-~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~----~ya--------~~i 187 (545)
.++|+||.||||+--.-++-+.+ .+...||+-.=|..+.+ ..|-+||+|..+. .+. +.+
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~--------~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m 76 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR--------AGYKLVVVTNQSGIGRGYFTEADFDKLHNKM 76 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh--------CCCeEEEEECCCCccccCccHHHHHHHHHHH
Confidence 67999999999996421111111 15678999999988876 4799999998442 222 245
Q ss_pred HHHhcCCCceeeEEEecCc-----ccee---cCcccccccccCcCCCcEEEEeCCCccccc----CCCccccccCCCCC
Q psy17690 188 LEALDKENKYFYFKLFRDS-----TEFV---DGHHVKNLDLLNRDLKKVIAVDWNTHSLSK----NRENALIIPRWNGN 254 (545)
Q Consensus 188 l~~LDp~~~~i~~rl~R~~-----c~~~---~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~----qp~N~I~I~~~~g~ 254 (545)
+..|-..+..|...++..| |... .|.+..=+...+-|+++.++|=|+..-... .-. ++.+..|.+.
T Consensus 77 ~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~~~~~~~~~ 154 (181)
T COG0241 77 LKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GVLVLTGIGV 154 (181)
T ss_pred HHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ceEEEcCccc
Confidence 5566565677888888433 3332 344555566668899999999888533322 222 5555556554
No 125
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=79.67 E-value=2.7 Score=40.71 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=40.6
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++||||||+.++- ...|...+-|..+.+ ....+++-|.-+...+..+++.|..
T Consensus 1 i~~DlDGTLl~~~~--------~i~~~~~~al~~l~~--------~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR--------AINESALEAIRKAES--------VGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc--------ccCHHHHHHHHHHHH--------CCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999998731 234455566777665 3689999999888888889888873
No 126
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=79.38 E-value=3.6 Score=41.73 Aligned_cols=59 Identities=20% Similarity=0.221 Sum_probs=43.1
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+++++||||||++.+- .++ ..=|+..++++.+.+ ....+++.|..+......+.+.|..
T Consensus 2 k~i~~D~DGtl~~~~~---~~~--~~~~~a~~al~~l~~--------~G~~~~~~Tn~~~~~~~~~~~~l~~ 60 (257)
T TIGR01458 2 KGVLLDISGVLYISDA---KSG--VAVPGSQEAVKRLRG--------ASVKVRFVTNTTKESKQDLLERLQR 60 (257)
T ss_pred CEEEEeCCCeEEeCCC---ccc--CcCCCHHHHHHHHHH--------CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 3789999999997721 000 146899999999986 3699999998777765555555543
No 127
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=78.85 E-value=2.8 Score=42.35 Aligned_cols=56 Identities=16% Similarity=0.123 Sum_probs=42.9
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
+.+++||||||+.++- ..-|...+-++.+.+ ....++|-|.-+...+.++++.++.
T Consensus 3 kli~~DlDGTLl~~~~--------~i~~~~~~ai~~l~~--------~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH--------HLGEKTLSTLARLRE--------RDITLTFATGRHVLEMQHILGALSL 58 (272)
T ss_pred cEEEEeCCCcCcCCCC--------cCCHHHHHHHHHHHH--------CCCEEEEECCCCHHHHHHHHHHcCC
Confidence 5889999999997631 234445566777765 3688999998888889999999876
No 128
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.63 E-value=1.6 Score=41.13 Aligned_cols=86 Identities=10% Similarity=0.117 Sum_probs=62.4
Q ss_pred HHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeC---ceeeecccccccCCcEE
Q psy17690 309 LEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLNRDLKKVI 385 (545)
Q Consensus 309 ~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g---~~vKDLs~LgRdL~~vI 385 (545)
.+.|..+.+.+.+.|-|++.+ .++..+++++.-. .+|+..+..+++..... .|.+-+.++|.+.+++|
T Consensus 93 ~e~L~~L~~~~~l~I~T~~~~--------~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l 163 (188)
T PRK10725 93 IEVVKAWHGRRPMAVGTGSES--------AIAEALLAHLGLR-RYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCV 163 (188)
T ss_pred HHHHHHHHhCCCEEEEcCCch--------HHHHHHHHhCCcH-hHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeE
Confidence 455666555577888899877 8899999998866 67999888887653221 35566777888899999
Q ss_pred EEeCCCcccccCCCCeee
Q psy17690 386 AVDWNTHSLSKNRENALI 403 (545)
Q Consensus 386 iIDn~p~s~~~qp~NgI~ 403 (545)
+|+|++.-+..--..|+.
T Consensus 164 ~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 164 VFEDADFGIQAARAAGMD 181 (188)
T ss_pred EEeccHhhHHHHHHCCCE
Confidence 999998765544444443
No 129
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=77.92 E-value=2.8 Score=51.08 Aligned_cols=92 Identities=11% Similarity=0.097 Sum_probs=71.3
Q ss_pred eCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccCc
Q psy17690 147 KRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNR 223 (545)
Q Consensus 147 kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~R 223 (545)
.-||+.++|++|.+ ..+.+.|.|++...+++.+++.+.-...+|...+..+.+.... ..+.+-++++|-
T Consensus 162 ~~pG~~elL~~Lk~--------~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv 233 (1057)
T PLN02919 162 GFPGALELITQCKN--------KGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGV 233 (1057)
T ss_pred cCccHHHHHHHHHh--------CCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCc
Confidence 37999999999986 4799999999999999999999875235788888777765322 245667778899
Q ss_pred CCCcEEEEeCCCcccccCCCccc
Q psy17690 224 DLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 224 dl~kvIivDd~~~s~~~qp~N~I 246 (545)
+.+++|+|+|++..+..--..|+
T Consensus 234 ~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 234 PTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred CcccEEEEcCCHHHHHHHHHcCC
Confidence 99999999999866544444443
No 130
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=77.65 E-value=6.1 Score=40.07 Aligned_cols=49 Identities=20% Similarity=0.284 Sum_probs=39.1
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeE
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYF 200 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~ 200 (545)
+..-||..+|++.+++ +...+|++|-|-+...|.+.||++-.- ...|+-
T Consensus 70 ip~~pgm~~~l~~l~~------~~~~~~~~IiSDaNs~fI~~iL~~~gl-~~~f~~ 118 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAK------NQRGFDLIIISDANSFFIETILEHHGL-RDCFSE 118 (234)
T ss_pred CCCCccHHHHHHHHHh------cCCCceEEEEeCCcHhHHHHHHHhCCC-ccccce
Confidence 5788999999999953 113799999999999999999998665 344444
No 131
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=77.53 E-value=5.8 Score=36.75 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=40.3
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEe
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLF 203 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~ 203 (545)
+..+||+.++++.+.+ ..+.++|.|++...+++++++.+.- ..++..++.
T Consensus 72 ~~~~~g~~~~l~~l~~--------~g~~~~ivS~~~~~~i~~~~~~~g~-~~~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKE--------RGIDTVIVSGGFDFFVEPVAEKLGI-DDVFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHH--------CCCEEEEECCCcHHHHHHHHHHcCC-chheeeeEE
Confidence 3468999999999976 3699999999999999999999865 345544443
No 132
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=77.42 E-value=3.5 Score=39.68 Aligned_cols=88 Identities=8% Similarity=0.098 Sum_probs=63.3
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---Cceeeecccc-cccC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL-NRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~L-gRdL 381 (545)
.+..++|+.+.+.+.+.|-|++.. .++..+++.+.-. .+|++.++.+.+.... ..|-+=+..+ |-+.
T Consensus 100 ~g~~~~L~~l~~~~~~~i~Sn~~~--------~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 170 (224)
T TIGR02254 100 PGAFELMENLQQKFRLYIVTNGVR--------ETQYKRLRKSGLF-PFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSK 170 (224)
T ss_pred ccHHHHHHHHHhcCcEEEEeCCch--------HHHHHHHHHCCcH-hhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCc
Confidence 467777877777788889999876 7888889888766 5789888877655321 2345557788 8899
Q ss_pred CcEEEEeCCC-cccccCCCCee
Q psy17690 382 KKVIAVDWNT-HSLSKNRENAL 402 (545)
Q Consensus 382 ~~vIiIDn~p-~s~~~qp~NgI 402 (545)
+++|+|+|++ .-...--.+|+
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCC
Confidence 9999999987 33333234444
No 133
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=77.16 E-value=4.8 Score=41.16 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=40.8
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.++++||||||++.. ..=||..++|+.+.+ ....+++-|+.+......++..|..
T Consensus 3 ~~~~~D~DGtl~~~~---------~~~~ga~e~l~~L~~--------~g~~~~~~Tnns~~~~~~~~~~l~~ 57 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE---------RVVPGAPELLDRLAR--------AGKAALFVTNNSTKSRAEYALKFAR 57 (279)
T ss_pred cEEEEeCCCceEcCC---------eeCcCHHHHHHHHHH--------CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378899999998752 245889999999986 3689999998776555555555533
No 134
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=77.07 E-value=3.2 Score=43.60 Aligned_cols=53 Identities=17% Similarity=0.252 Sum_probs=38.4
Q ss_pred eEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCC----ceEEEEEcCCChhcHHHHHHHh
Q psy17690 122 YTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVP----LFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 122 ~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~----~yEivIfTa~~~~ya~~il~~L 191 (545)
+.+++||||||++.. ..=|+..++++.+.. . ...++++|.........+++.|
T Consensus 1 ~~~ifD~DGvL~~g~---------~~i~ga~eal~~L~~--------~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK---------KPIAGASDALRRLNR--------NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred CEEEEeCcCceECCc---------cccHHHHHHHHHHhc--------cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 368999999999872 236888999999985 3 4677888977755544444444
No 135
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=75.72 E-value=3 Score=40.06 Aligned_cols=111 Identities=15% Similarity=0.101 Sum_probs=70.1
Q ss_pred CeEEEEeCCCeeEeeccc-cCcc---eeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCc
Q psy17690 121 PYTLLLEFRDLLVHPEWT-YNTG---WRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENK 196 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~-~~~g---~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~ 196 (545)
-+++|+|+||||..-... -..| -.+..|=+.--.+-.-. .+.+.|-|+....+++.+++.+.- ..
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~----------Gi~laIiT~k~~~~~~~~l~~lgi-~~ 75 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLC----------GIDVAIITSKKSGAVRHRAEELKI-KR 75 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHC----------CCEEEEEECCCcHHHHHHHHHCCC-cE
Confidence 568999999999875321 1222 23556665554433333 699999999999999999999976 44
Q ss_pred eeeEEEecCccceecCcccccccccCcCCCcEEEEeCCCcccccCCCccccc
Q psy17690 197 YFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 248 (545)
Q Consensus 197 ~i~~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~I~I 248 (545)
+|... .-....+-.=+..+|-+.++|++|-|+..-..+--..++.+
T Consensus 76 ~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~ 121 (169)
T TIGR02726 76 FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAV 121 (169)
T ss_pred EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 45421 10001122334456777889999999986655444444444
No 136
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=75.32 E-value=1.9 Score=41.66 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=57.6
Q ss_pred hhHHHhhhcccce-eEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKENKY-FYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~-fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+.+. +.+.|.|++.. .++...+++++-. .+|+..+..+..... ...|.+=++.+|-+.
T Consensus 97 ~g~~~~L~~L~~~g~~~~i~Tn~~~--------~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 167 (221)
T TIGR02253 97 PGVRDTLMELRESGYRLGIITDGLP--------VKQWEKLERLGVR-DFFDAVITSEEEGVEKPHPKIFYAALKRLGVKP 167 (221)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCch--------HHHHHHHHhCChH-HhccEEEEeccCCCCCCCHHHHHHHHHHcCCCh
Confidence 4677777777554 88889999865 6788889988876 678888877665421 123455577889899
Q ss_pred CcEEEEeCCC
Q psy17690 382 KKVIAVDWNT 391 (545)
Q Consensus 382 ~~vIiIDn~p 391 (545)
+++|+|.|++
T Consensus 168 ~~~~~igDs~ 177 (221)
T TIGR02253 168 EEAVMVGDRL 177 (221)
T ss_pred hhEEEECCCh
Confidence 9999999998
No 137
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=75.30 E-value=1.4 Score=41.64 Aligned_cols=78 Identities=15% Similarity=0.051 Sum_probs=55.7
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCccee-------EeCceeeeccccc
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEF-------VDGHHVKNLDLLN 378 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~-------~~g~~vKDLs~Lg 378 (545)
.+..++|+++. +.+.|.|++.. .++..+++.+.-. .+|+..+..+.... ....|.+=+..+|
T Consensus 87 ~g~~~~L~~L~--~~~~i~Tn~~~--------~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 87 PELRNLLLRLP--GRKIIFTNGDR--------AHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred HHHHHHHHhCC--CCEEEEeCCCH--------HHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 35666677765 45778898876 6888999988755 57888777655332 2224555577789
Q ss_pred ccCCcEEEEeCCCccc
Q psy17690 379 RDLKKVIAVDWNTHSL 394 (545)
Q Consensus 379 RdL~~vIiIDn~p~s~ 394 (545)
.+.+++++|+|++...
T Consensus 156 ~~~~~~l~vgD~~~di 171 (184)
T TIGR01993 156 VDPERAIFFDDSARNI 171 (184)
T ss_pred CCccceEEEeCCHHHH
Confidence 9999999999998644
No 138
>KOG2914|consensus
Probab=75.21 E-value=2.7 Score=42.29 Aligned_cols=85 Identities=16% Similarity=0.129 Sum_probs=63.6
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc-CCCceeeEEEecCccceecC-----cccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD-KENKYFYFKLFRDSTEFVDG-----HHVKNL 218 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD-p~~~~i~~rl~R~~c~~~~g-----~~vKdL 218 (545)
.+.=||+..++.+|.. ..-.+-++|++...+++..++.+- . -..|.+...-+.=....| .|.+=+
T Consensus 91 ~~~~PGa~kLv~~L~~--------~gip~alat~s~~~~~~~k~~~~~~~-~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~ 161 (222)
T KOG2914|consen 91 SILMPGAEKLVNHLKN--------NGIPVALATSSTSASFELKISRHEDI-FKNFSHVVLGDDPEVKNGKPDPDIYLKAA 161 (222)
T ss_pred cccCCcHHHHHHHHHh--------CCCCeeEEecCCcccHHHHHHHhhHH-HHhcCCCeecCCccccCCCCCchHHHHHH
Confidence 4667899999999996 468899999999999888888764 3 344555544233233333 357778
Q ss_pred cccCcCC-CcEEEEeCCCccc
Q psy17690 219 DLLNRDL-KKVIAVDWNTHSL 238 (545)
Q Consensus 219 ~~L~Rdl-~kvIivDd~~~s~ 238 (545)
++||-+. +++++++|++.-+
T Consensus 162 ~~l~~~~~~k~lVfeds~~Gv 182 (222)
T KOG2914|consen 162 KRLGVPPPSKCLVFEDSPVGV 182 (222)
T ss_pred HhcCCCCccceEEECCCHHHH
Confidence 8899888 9999999999654
No 139
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=74.45 E-value=2.4 Score=40.46 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=58.4
Q ss_pred hhHHHhhhcccce-eEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKENKY-FYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~-fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..++|+.+.+. |.+.|.|++.. .++..+++.+.-. .+|++.+..++.... ...|.+=++.+|-++
T Consensus 95 ~~~~~~L~~L~~~g~~~~i~Sn~~~--------~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p 165 (198)
T TIGR01428 95 PDVPAGLRALKERGYRLAILSNGSP--------AMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPP 165 (198)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCCh
Confidence 4677788887775 99999999877 7788888887644 578888776654321 123445566779899
Q ss_pred CcEEEEeCCCccc
Q psy17690 382 KKVIAVDWNTHSL 394 (545)
Q Consensus 382 ~~vIiIDn~p~s~ 394 (545)
+++|+|+|++.-+
T Consensus 166 ~~~~~vgD~~~Di 178 (198)
T TIGR01428 166 DEVLFVASNPWDL 178 (198)
T ss_pred hhEEEEeCCHHHH
Confidence 9999999998543
No 140
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=74.18 E-value=2.2 Score=41.04 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=64.7
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCccee---EeCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEF---VDGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~---~~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. +.+.+.|.|.+.. .++..+++.++-. .+|+..+..+++.. ....+.+=+..+|-+.
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn~~~--------~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 148 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATGKSG--------PRARSLLEALGLL-PLFDHVIGSDEVPRPKPAPDIVREALRLLDVPP 148 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCch--------HHHHHHHHHcCCh-hheeeEEecCcCCCCCCChHHHHHHHHHcCCCh
Confidence 36777777764 4688899999876 7888999998877 67888877766532 1223444466678889
Q ss_pred CcEEEEeCCCcccccCCCCeeec
Q psy17690 382 KKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+++|+|+|++.-+..--.+|+..
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeE
Confidence 99999999987555445566653
No 141
>PLN02811 hydrolase
Probab=73.22 E-value=3 Score=40.77 Aligned_cols=94 Identities=9% Similarity=0.021 Sum_probs=62.3
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHH-HHHHhcCCCceeeEEEecC--ccce---ecCcccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAP-ILEALDKENKYFYFKLFRD--STEF---VDGHHVKNL 218 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~-il~~LDp~~~~i~~rl~R~--~c~~---~~g~~vKdL 218 (545)
....||+.++|+.|.+ ..+.+.|-|++...++.. +.+...- ..+|.+.+..+ .+.. ....|.+=+
T Consensus 77 ~~l~~gv~e~l~~L~~--------~g~~~~i~S~~~~~~~~~~~~~~~~l-~~~f~~i~~~~~~~~~~~KP~p~~~~~a~ 147 (220)
T PLN02811 77 SDLMPGAERLVRHLHA--------KGIPIAIATGSHKRHFDLKTQRHGEL-FSLMHHVVTGDDPEVKQGKPAPDIFLAAA 147 (220)
T ss_pred CCCCccHHHHHHHHHH--------CCCcEEEEeCCchhhHHHHHcccHHH-HhhCCEEEECChhhccCCCCCcHHHHHHH
Confidence 3567999999999986 479999999988765543 3322222 34677777777 4432 222344555
Q ss_pred cccC---cCCCcEEEEeCCCcccccCCCcccc
Q psy17690 219 DLLN---RDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 219 ~~L~---Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
..++ -+.+++|+|+|+..-+..--..|+.
T Consensus 148 ~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 148 RRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred HHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 5554 7889999999999766554444444
No 142
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=72.77 E-value=4.9 Score=41.07 Aligned_cols=63 Identities=6% Similarity=0.026 Sum_probs=42.0
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
.++..|++|+||||+...-.+... ..-|.+.+-|+.|++ .+...++|-|.-...-+..+++.+
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~~~---~i~~~~~~~L~~L~~-------~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPDQV---VVPDNILQGLQLLAT-------ANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCcccc---cCCHHHHHHHHHHHh-------CCCCcEEEEeCCCHHHHHHhcCcc
Confidence 447899999999999752222221 344677777888874 014678888888777666665444
No 143
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=72.26 E-value=3.4 Score=40.01 Aligned_cols=90 Identities=14% Similarity=0.218 Sum_probs=66.5
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..++|+.+. +.+.+.|.|++.+ .++..+++.++-. .+|++.+..+++... ...+.+=+..+|-+.
T Consensus 85 ~g~~~~l~~L~~~g~~~~i~S~~~~--------~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 155 (214)
T PRK13288 85 ETVYETLKTLKKQGYKLGIVTTKMR--------DTVEMGLKLTGLD-EFFDVVITLDDVEHAKPDPEPVLKALELLGAKP 155 (214)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHcCCh-hceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence 46677777764 3578889999977 7889999998877 689998887776532 224455566778889
Q ss_pred CcEEEEeCCCcccccCCCCeeec
Q psy17690 382 KKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+++++|+|++.-+..--.+|+..
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeE
Confidence 99999999997665545566653
No 144
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=71.74 E-value=3.4 Score=38.25 Aligned_cols=79 Identities=14% Similarity=0.117 Sum_probs=52.8
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.+..++|+.+.+ .+.+.|.|++.. .+ ..++.+++-. .+|+..++.+.+.... ..|.+=+..+|.+.
T Consensus 88 ~g~~~~l~~l~~~g~~~~i~Tn~~~--------~~-~~~~~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 157 (183)
T TIGR01509 88 PGVEPLLEALRARGKKLALLTNSPR--------DH-AVLVQELGLR-DLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKP 157 (183)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCch--------HH-HHHHHhcCCH-HHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 355666666643 578889999876 44 5555556655 5688887765544221 23444467778899
Q ss_pred CcEEEEeCCCccc
Q psy17690 382 KKVIAVDWNTHSL 394 (545)
Q Consensus 382 ~~vIiIDn~p~s~ 394 (545)
+++|+|||++...
T Consensus 158 ~~~~~vgD~~~di 170 (183)
T TIGR01509 158 EECLFVDDSPAGI 170 (183)
T ss_pred ceEEEEcCCHHHH
Confidence 9999999998643
No 145
>KOG3120|consensus
Probab=71.42 E-value=4.1 Score=41.24 Aligned_cols=87 Identities=18% Similarity=0.283 Sum_probs=62.0
Q ss_pred CCCCeEEEEeCCCeeEeeccc-------------------cC-cce--------------------------eeeeCCCh
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWT-------------------YN-TGW--------------------------RFKKRPFV 151 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~-------------------~~-~g~--------------------------~~~kRPgl 151 (545)
.+++..||+|.|.|+|.-+.. .. -+| .+-.-||+
T Consensus 10 ~~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgm 89 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGM 89 (256)
T ss_pred cCCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccH
Confidence 357899999999999985321 11 112 13466999
Q ss_pred hHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecC
Q psy17690 152 DDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDG 212 (545)
Q Consensus 152 d~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g 212 (545)
-.-++.+++ ++ .||++|-|-++..+.+.++++.+- +.+|+-.+.-.+|.-..|
T Consensus 90 v~lik~~ak----~g---~~eliIVSDaNsfFIe~~Lea~~~-~d~F~~IfTNPa~~da~G 142 (256)
T KOG3120|consen 90 VRLIKSAAK----LG---CFELIIVSDANSFFIEEILEAAGI-HDLFSEIFTNPACVDASG 142 (256)
T ss_pred HHHHHHHHh----CC---CceEEEEecCchhHHHHHHHHccH-HHHHHHHhcCCcccCCCC
Confidence 999999986 23 699999999999999999999876 555553333444444444
No 146
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=70.55 E-value=5.3 Score=39.93 Aligned_cols=60 Identities=15% Similarity=0.042 Sum_probs=38.0
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
++.|+.||||||+.+. +. .-...|.+.+-++.+.+ ..-.+|+-|+-+..-+..+++.+..
T Consensus 1 ~~li~tDlDGTLl~~~-~~----~~~~~~~~~~~i~~~~~--------~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHT-DG----DNQALLRLNALLEDHRG--------EDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCC-CC----ChHHHHHHHHHHHHhhc--------cCceEEEEcCCCHHHHHHHHhcCCC
Confidence 4688999999999642 11 12344777777777664 1236666666666667777665543
No 147
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=70.20 E-value=8.6 Score=38.75 Aligned_cols=53 Identities=15% Similarity=0.242 Sum_probs=37.9
Q ss_pred EEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc
Q psy17690 123 TLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD 192 (545)
Q Consensus 123 tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD 192 (545)
++++||||||++.. ..=|+..++|+.+.+ ....+++.|..+......+...|.
T Consensus 3 ~~~~D~DGtl~~~~---------~~i~~a~~~l~~l~~--------~g~~~~~~Tnn~~r~~~~~~~~l~ 55 (249)
T TIGR01457 3 GYLIDLDGTMYKGK---------ERIPEAETFVHELQK--------RDIPYLFVTNNSTRTPESVAEMLA 55 (249)
T ss_pred EEEEeCCCceEcCC---------eeCcCHHHHHHHHHH--------CCCeEEEEeCCCCCCHHHHHHHHH
Confidence 78999999999762 123688999999986 368899999755444444444443
No 148
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=70.07 E-value=7.8 Score=36.91 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=56.3
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEec-Ccccee---cCcc----cc-
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFR-DSTEFV---DGHH----VK- 216 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R-~~c~~~---~g~~----vK- 216 (545)
..+|++.++|+.+.+ ..+.++|-|++...+++++++.+.- ..+|..++.- ++-.+. .|.. -|
T Consensus 87 ~~~~~~~~~l~~l~~--------~g~~v~ivS~s~~~~v~~~~~~lg~-~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~ 157 (202)
T TIGR01490 87 ILYPEARDLIRWHKA--------EGHTIVLVSASLTILVKPLARILGI-DNAIGTRLEESEDGIYTGNIDGNNCKGEGKV 157 (202)
T ss_pred hccHHHHHHHHHHHH--------CCCEEEEEeCCcHHHHHHHHHHcCC-cceEecceEEcCCCEEeCCccCCCCCChHHH
Confidence 579999999999875 3689999999999999999999876 4566665442 211111 1110 01
Q ss_pred -cc----cccCcCCCcEEEEeCCCccc
Q psy17690 217 -NL----DLLNRDLKKVIAVDWNTHSL 238 (545)
Q Consensus 217 -dL----~~L~Rdl~kvIivDd~~~s~ 238 (545)
-+ +..+-++++++.+-|+..-.
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 158 HALAELLAEEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred HHHHHHHHHcCCCHHHcEeeeCCcccH
Confidence 12 23355677888888877544
No 149
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=69.98 E-value=8.7 Score=37.78 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=70.0
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecC---cccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g---~~vKdL~~L~ 222 (545)
..=||+.+.|..+.+ ..|.+.|.|+.....++.+++.++- ..+|.....-+.+..... .+..-+..+|
T Consensus 89 ~~~~gv~e~L~~L~~--------~g~~l~i~T~k~~~~~~~~l~~~gl-~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 89 RLFPGVKELLAALKS--------AGYKLGIVTNKPERELDILLKALGL-ADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred ccCCCHHHHHHHHHh--------CCCeEEEEeCCcHHHHHHHHHHhCC-ccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 357999999999997 4799999999999999999999888 778877776333333222 2345556677
Q ss_pred cCCCcEEEEeCCCcccccCCCcccc
Q psy17690 223 RDLKKVIAVDWNTHSLSKNRENALI 247 (545)
Q Consensus 223 Rdl~kvIivDd~~~s~~~qp~N~I~ 247 (545)
.+.+++|+|=|+..-...=...|+.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVP 184 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCC
Confidence 7767999999998777664444443
No 150
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=69.18 E-value=1.9 Score=38.97 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=61.1
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..++|..+. +.+.+.+.|.+.. .++..+++.+.-. .+|+..++.+++... ...|-+=+..+|-+.
T Consensus 80 ~~~~~~L~~l~~~~~~~~i~Sn~~~--------~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p 150 (176)
T PF13419_consen 80 PGVRELLERLKAKGIPLVIVSNGSR--------ERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPP 150 (176)
T ss_dssp TTHHHHHHHHHHTTSEEEEEESSEH--------HHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSG
T ss_pred hhhhhhhhhcccccceeEEeecCCc--------ccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCc
Confidence 47788888887 8899999998866 7888999998766 678888877765532 123445566678899
Q ss_pred CcEEEEeCCCccc
Q psy17690 382 KKVIAVDWNTHSL 394 (545)
Q Consensus 382 ~~vIiIDn~p~s~ 394 (545)
+++|.|||++...
T Consensus 151 ~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 151 EEILFVGDSPSDV 163 (176)
T ss_dssp GGEEEEESSHHHH
T ss_pred ceEEEEeCCHHHH
Confidence 9999999998543
No 151
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=68.50 E-value=2.4 Score=39.53 Aligned_cols=76 Identities=13% Similarity=0.064 Sum_probs=57.2
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---Cccccccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLL 221 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L 221 (545)
+...||+.++|+. +.|.|++...++..+++.+.- ..+|...+..+...... ..|.+=+.++
T Consensus 89 ~~~~~g~~~~L~~---------------~~i~Tn~~~~~~~~~l~~~~l-~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~ 152 (175)
T TIGR01493 89 LPPWPDSAAALAR---------------VAILSNASHWAFDQFAQQAGL-PWYFDRAFSVDTVRAYKPDPVVYELVFDTV 152 (175)
T ss_pred CCCCCchHHHHHH---------------HhhhhCCCHHHHHHHHHHCCC-HHHHhhhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4578999999984 458899999999999999865 66777666555433221 2345667788
Q ss_pred CcCCCcEEEEeCCCc
Q psy17690 222 NRDLKKVIAVDWNTH 236 (545)
Q Consensus 222 ~Rdl~kvIivDd~~~ 236 (545)
|-+.+++|+|+|+..
T Consensus 153 ~~~p~~~l~vgD~~~ 167 (175)
T TIGR01493 153 GLPPDRVLMVAAHQW 167 (175)
T ss_pred CCCHHHeEeEecChh
Confidence 999999999999964
No 152
>PTZ00174 phosphomannomutase; Provisional
Probab=68.04 E-value=5.8 Score=39.78 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=35.0
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHH
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPIL 188 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il 188 (545)
.+.+++||||||++++- ...|...+-|+.+.+ ....++|-|.-+..-+...+
T Consensus 5 ~klia~DlDGTLL~~~~--------~is~~~~~ai~~l~~--------~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN--------PITQEMKDTLAKLKS--------KGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CeEEEEECcCCCcCCCC--------CCCHHHHHHHHHHHH--------CCCEEEEEcCCCHHHHHHHH
Confidence 56899999999998842 233445566777765 35888888876655444433
No 153
>PLN02887 hydrolase family protein
Probab=67.11 E-value=9.2 Score=43.79 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=43.4
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
++-+.+++||||||+.++- ..-|...+-++.+.+ ....++|-|.-....+..+++.|+.
T Consensus 306 ~~iKLIa~DLDGTLLn~d~--------~Is~~t~eAI~kl~e--------kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS--------QISETNAKALKEALS--------RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred cCccEEEEeCCCCCCCCCC--------ccCHHHHHHHHHHHH--------CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 3457899999999998732 133444555666665 3689999998888888899998864
No 154
>PRK09449 dUMP phosphatase; Provisional
Probab=66.45 E-value=2.8 Score=40.73 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=57.5
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccc-cC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNR-DL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgR-dL 381 (545)
.+..++|+.+.+.+.+.|.|++.. ..+..+++.+.-. .+|+..++.+++... ...|.+=++.+|- +.
T Consensus 98 ~g~~~~L~~L~~~~~~~i~Tn~~~--------~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 168 (224)
T PRK09449 98 PGAVELLNALRGKVKMGIITNGFT--------ELQQVRLERTGLR-DYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDR 168 (224)
T ss_pred ccHHHHHHHHHhCCeEEEEeCCcH--------HHHHHHHHhCChH-HHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCc
Confidence 466777777777788889999876 7788888887766 578888887776422 2245556777884 56
Q ss_pred CcEEEEeCCCc
Q psy17690 382 KKVIAVDWNTH 392 (545)
Q Consensus 382 ~~vIiIDn~p~ 392 (545)
+++++|+|++.
T Consensus 169 ~~~~~vgD~~~ 179 (224)
T PRK09449 169 SRVLMVGDNLH 179 (224)
T ss_pred ccEEEEcCCcH
Confidence 89999999973
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=65.18 E-value=4.6 Score=38.78 Aligned_cols=94 Identities=5% Similarity=-0.059 Sum_probs=58.4
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..+.|+.+. +.+.+.|.|++.. ..+..++.....-..+|++.++.+++... ...|.+=++.+|-+.
T Consensus 87 ~g~~e~L~~l~~~g~~~~i~Sn~~~--------~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p 158 (199)
T PRK09456 87 PEVIAIMHKLREQGHRVVVLSNTNR--------LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSA 158 (199)
T ss_pred HHHHHHHHHHHhCCCcEEEEcCCch--------hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCCh
Confidence 46777777774 4588889998865 23333332211112457777766665532 124455578889999
Q ss_pred CcEEEEeCCCcccccCCCCeeeccCC
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIPRW 407 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~~w 407 (545)
+++|+|||++..+..--..|+..--+
T Consensus 159 ~~~l~vgD~~~di~aA~~aG~~~i~~ 184 (199)
T PRK09456 159 ADAVFFDDNADNIEAANALGITSILV 184 (199)
T ss_pred hHeEEeCCCHHHHHHHHHcCCEEEEe
Confidence 99999999987654444555554433
No 156
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=65.01 E-value=8.4 Score=32.84 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=35.2
Q ss_pred eEEEecccccccccccccccc-ccccCCcHHHHHHHhcCCCCCCCCCCceEEEEEecc
Q psy17690 487 TLLLEFRDLLVHPEWTYNTGW-RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE 543 (545)
Q Consensus 487 ~l~~~~~~~l~~~~~~~~~~~-~~~krp~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 543 (545)
++|+|+|+||...+ .....| ...-+||+-.+|++|.. ..+.|+|.|+.
T Consensus 1 ~~vfD~D~tl~~~~-~~~~~~~~~~~~~~~~~~l~~l~~--------~g~~i~ivS~~ 49 (139)
T cd01427 1 AVLFDLDGTLLDSE-PGIAEIEELELYPGVKEALKELKE--------KGIKLALATNK 49 (139)
T ss_pred CeEEccCCceEccC-ccccccccCCcCcCHHHHHHHHHH--------CCCeEEEEeCc
Confidence 47999999997665 222222 34568999999999973 34899999974
No 157
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=64.76 E-value=4.6 Score=39.11 Aligned_cols=90 Identities=12% Similarity=0.030 Sum_probs=54.7
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcce-----------e--EeCcee
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTE-----------F--VDGHHV 371 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~-----------~--~~g~~v 371 (545)
.+..++|+.+.+ .+.+.|.|++.. .++..+++.+.-. .+|...+.-++.. . +...+.
T Consensus 88 ~g~~~~l~~l~~~g~~~~IvS~~~~--------~~~~~~l~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 158 (219)
T TIGR00338 88 EGAEELVKTLKEKGYKVAVISGGFD--------LFAEHVKDKLGLD-AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLL 158 (219)
T ss_pred CCHHHHHHHHHHCCCEEEEECCCcH--------HHHHHHHHHcCCC-ceEeeEEEEECCEEEEEecCcccCCcccHHHHH
Confidence 456666666654 588999999977 7888999887655 3454332211111 0 111122
Q ss_pred eecccccccCCcEEEEeCCCcccccCCCCeeec
Q psy17690 372 KNLDLLNRDLKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 372 KDLs~LgRdL~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+=++.+|-+.+++|+|+|++.-...--.-|+.|
T Consensus 159 ~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 159 ILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 224456778899999999987554433344544
No 158
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=64.61 E-value=7.5 Score=39.36 Aligned_cols=67 Identities=10% Similarity=0.138 Sum_probs=47.1
Q ss_pred CCCeEEEEeCCCeeEeec-------ccc---C-cc---e----eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC
Q psy17690 119 QPPYTLLLEFRDLLVHPE-------WTY---N-TG---W----RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES 180 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~-------~~~---~-~g---~----~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~ 180 (545)
.++..+|||+|||++... +.. . .. | .-..-|+..+|++++.+ ..++|++-|.-.
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~--------~G~~Vf~lTGR~ 146 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE--------LGIKIFLLSGRW 146 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH--------CCCEEEEEcCCC
Confidence 468899999999999862 110 0 01 1 13466888899999875 379999999988
Q ss_pred hhcHHHHHHHhcC
Q psy17690 181 GLSIAPILEALDK 193 (545)
Q Consensus 181 ~~ya~~il~~LDp 193 (545)
....+..++.|..
T Consensus 147 e~~r~~T~~nL~~ 159 (229)
T TIGR01675 147 EELRNATLDNLIN 159 (229)
T ss_pred hHHHHHHHHHHHH
Confidence 7776666666644
No 159
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=63.02 E-value=2.4 Score=42.47 Aligned_cols=91 Identities=7% Similarity=0.099 Sum_probs=67.8
Q ss_pred hhHHHhhhcc-cceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKE-NKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kl-sk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..++|+.+ .+.+.+.|-|++.. .++..++++++-. .+|+..+..+.+... ...|.+=+..+|-+.
T Consensus 111 pgv~e~L~~L~~~g~~l~I~Tn~~~--------~~~~~~l~~~gl~-~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~ 181 (248)
T PLN02770 111 NGLYKLKKWIEDRGLKRAAVTNAPR--------ENAELMISLLGLS-DFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK 181 (248)
T ss_pred ccHHHHHHHHHHcCCeEEEEeCCCH--------HHHHHHHHHcCCh-hhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh
Confidence 3566677666 34688888999877 7899999998877 689999888876532 124555677788889
Q ss_pred CcEEEEeCCCcccccCCCCeeecc
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIP 405 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~ 405 (545)
+++|+|+|++.-...--.+|+..-
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEE
Confidence 999999999976655456666643
No 160
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=62.08 E-value=15 Score=41.76 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=65.8
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceee
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFY 199 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~ 199 (545)
+.-.++++.|++++.- .+..-..||++.+.++++.+ ..++++|-|+....+|+.+++.+.-+ +
T Consensus 384 g~~~~~~~~~~~~~g~-----~~~~d~l~~~a~e~i~~Lk~--------~Gi~v~ilSgd~~~~a~~ia~~lgi~--~-- 446 (562)
T TIGR01511 384 GSTSVLVAVNGELAGV-----FALEDQLRPEAKEVIQALKR--------RGIEPVMLTGDNRKTAKAVAKELGIN--V-- 446 (562)
T ss_pred CCEEEEEEECCEEEEE-----EEecccccHHHHHHHHHHHH--------cCCeEEEEcCCCHHHHHHHHHHcCCc--E--
Confidence 3445666777776644 22344789999999999986 46999999999999999999998652 1
Q ss_pred EEEecCccceecCcccccccccCcCCCcEEEEeCCCccccc
Q psy17690 200 FKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 200 ~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
|.+.........++.| ..+.++|++|-|...-...
T Consensus 447 ---~~~~~p~~K~~~v~~l---~~~~~~v~~VGDg~nD~~a 481 (562)
T TIGR01511 447 ---RAEVLPDDKAALIKEL---QEKGRVVAMVGDGINDAPA 481 (562)
T ss_pred ---EccCChHHHHHHHHHH---HHcCCEEEEEeCCCccHHH
Confidence 2111111112233443 3356789999988765544
No 161
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=62.05 E-value=4.1 Score=39.05 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=62.3
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. +.+.+.|.|++.. .++..++++++-. .+|+..+..+...... ..+.+=++.+|-+.
T Consensus 88 ~g~~~~L~~l~~~g~~~~i~S~~~~--------~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 158 (213)
T TIGR01449 88 PGVEATLGALRAKGLRLGLVTNKPT--------PLARPLLELLGLA-KYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP 158 (213)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHcCcH-hhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh
Confidence 36667777764 4588889999876 7888999998766 5677776655432111 13456678889999
Q ss_pred CcEEEEeCCCcccccCCCCeeec
Q psy17690 382 KKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+++++|+|++.-+..--..|+..
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeE
Confidence 99999999987554433444443
No 162
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=60.99 E-value=11 Score=33.54 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=37.0
Q ss_pred eEEEecccccccccccccccc-ccccCCcHHHHHHHhcCCCCCCCCCCceEEEEEeccC
Q psy17690 487 TLLLEFRDLLVHPEWTYNTGW-RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES 544 (545)
Q Consensus 487 ~l~~~~~~~l~~~~~~~~~~~-~~~krp~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 544 (545)
.|++++++||++. =.+..+| ...-.||+..+|++|.. .-+.++|-|...
T Consensus 2 ~~~~D~dgtL~~~-~~~~~~~~~~~~~~~v~~~l~~L~~--------~g~~l~i~Sn~~ 51 (132)
T TIGR01662 2 GVVLDLDGTLTDD-VPYVDDEDERILYPEVPDALAELKE--------AGYKVVIVTNQS 51 (132)
T ss_pred EEEEeCCCceecC-CCCCCCHHHheeCCCHHHHHHHHHH--------CCCEEEEEECCc
Confidence 5899999999963 2444456 34668999999999963 458999988743
No 163
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=60.72 E-value=13 Score=35.66 Aligned_cols=60 Identities=7% Similarity=0.072 Sum_probs=46.4
Q ss_pred EEEeCCCeeEeeccc----cCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc
Q psy17690 124 LLLEFRDLLVHPEWT----YNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD 192 (545)
Q Consensus 124 LVLDLDeTLvhs~~~----~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD 192 (545)
+|-|+||||.-|+.. .-.|.. +.+||+.++...+.+ ..|.++=-||-.-..|...-+.|.
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d-~~h~g~~~l~~~i~~--------~GY~ilYlTaRp~~qa~~Tr~~L~ 65 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKD-WTHPGAAELYRKIAD--------NGYKILYLTARPIGQANRTRSWLA 65 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCch-hhhhcHHHHHHHHHH--------CCeEEEEECcCcHHHHHHHHHHHH
Confidence 678999999999631 223443 789999999999997 489998888888777776666664
No 164
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=60.06 E-value=11 Score=37.60 Aligned_cols=51 Identities=22% Similarity=0.165 Sum_probs=37.3
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
+++|+||||+..+. .=|+..+++..+.+ ..+.+++-|.+.......+.+.|
T Consensus 1 ~lfD~DGvL~~~~~---------~~~~a~e~i~~l~~--------~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLGHK---------PIPGAAEALNRLRA--------KGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcCCc---------cCcCHHHHHHHHHH--------CCCeEEEEECCCCCCHHHHHHHH
Confidence 47999999998731 13588999999975 36889999977765555555544
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=59.08 E-value=8.2 Score=38.77 Aligned_cols=65 Identities=9% Similarity=0.165 Sum_probs=43.1
Q ss_pred CCCeEEEEeCCCeeEeec-c-----------ccC-------cceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCC
Q psy17690 119 QPPYTLLLEFRDLLVHPE-W-----------TYN-------TGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSE 179 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~-~-----------~~~-------~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~ 179 (545)
.++..+|||||||++... + +.. .|.. ..=|+.-+|++++.+ ..++|++-|.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~-~aip~a~~l~~~~~~--------~G~~V~~iT~R 140 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKA-PAIPGALELYNYARS--------RGVKVFFITGR 140 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGG-EEETTHHHHHHHHHH--------TTEEEEEEEEE
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccC-cccHHHHHHHHHHHH--------CCCeEEEEecC
Confidence 357899999999988541 1 000 1112 455788899999886 46888888876
Q ss_pred ChhcHHHHHHHhc
Q psy17690 180 SGLSIAPILEALD 192 (545)
Q Consensus 180 ~~~ya~~il~~LD 192 (545)
....-+.-++.|.
T Consensus 141 ~~~~r~~T~~nL~ 153 (229)
T PF03767_consen 141 PESQREATEKNLK 153 (229)
T ss_dssp ETTCHHHHHHHHH
T ss_pred CchhHHHHHHHHH
Confidence 6665555555554
No 166
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=58.74 E-value=16 Score=37.87 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=44.1
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
..+..+||||||++-. ..=||..+||+.+.+ ..-.+++-|.++....+.+..+|..
T Consensus 8 y~~~l~DlDGvl~~G~---------~~ipga~e~l~~L~~--------~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRGN---------EAIPGAAEALKRLKA--------AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeCC---------ccCchHHHHHHHHHH--------cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 3478999999999762 334899999999987 3588899999998887777776653
No 167
>PRK11590 hypothetical protein; Provisional
Probab=57.98 E-value=5.5 Score=38.94 Aligned_cols=35 Identities=11% Similarity=-0.052 Sum_probs=26.8
Q ss_pred hhHHHhh-hccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhcc
Q psy17690 306 APILEAL-DKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALD 348 (545)
Q Consensus 306 ~e~~EfL-~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LD 348 (545)
.++.|.| +.+. +.+.+.|-||+.+ .|+.+++..+.
T Consensus 98 pga~e~L~~~l~~~G~~l~IvSas~~--------~~~~~il~~l~ 134 (211)
T PRK11590 98 PVVQERLTTYLLSSDADVWLITGSPQ--------PLVEQVYFDTP 134 (211)
T ss_pred ccHHHHHHHHHHhCCCEEEEEeCCcH--------HHHHHHHHHcc
Confidence 4666777 3343 6888999999987 89999998865
No 168
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=56.90 E-value=11 Score=41.08 Aligned_cols=89 Identities=9% Similarity=0.085 Sum_probs=67.2
Q ss_pred hhHHHhhhcc-cceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKE-NKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kl-sk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.+..++|+.+ ...+.+.|-|++.. .++..+++.+.-. .+|+..+..+++.... ..|.+=+..+|-+.
T Consensus 219 pGa~ElL~~Lk~~GiklaIaSn~~~--------~~~~~~L~~lgL~-~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~P 289 (381)
T PLN02575 219 TGSQEFVNVLMNYKIPMALVSTRPR--------KTLENAIGSIGIR-GFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIP 289 (381)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHcCCH-HHceEEEecCcCCCCCCCHHHHHHHHHHcCCCc
Confidence 4677777776 34578888898877 8999999998866 6899999988875321 24566788889999
Q ss_pred CcEEEEeCCCcccccCCCCeee
Q psy17690 382 KKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
+++|+|+|++.-...--..|+.
T Consensus 290 eecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 290 ERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred ccEEEEcCCHHHHHHHHHcCCE
Confidence 9999999998765544444544
No 169
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=56.20 E-value=8.2 Score=37.09 Aligned_cols=79 Identities=20% Similarity=0.187 Sum_probs=41.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChh----cHHHHHHHhcCC-Ccee-eEEEecCccceecCcccccc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGL----SIAPILEALDKE-NKYF-YFKLFRDSTEFVDGHHVKNL 218 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~----ya~~il~~LDp~-~~~i-~~rl~R~~c~~~~g~~vKdL 218 (545)
..-=||+.+.|+.|.+ ..+++++-||.... .+..-.+.|+.. .... ...++.. -|.
T Consensus 72 l~p~~gA~e~l~~L~~--------~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~---------~K~- 133 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD--------KGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG---------DKT- 133 (191)
T ss_dssp --B-TTHHHHHHHHHT--------STTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES---------SGG-
T ss_pred CCccHHHHHHHHHHHH--------cCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec---------CCC-
Confidence 3556899999999997 34688888877755 244445555441 0111 1111111 122
Q ss_pred cccCcCCCcEEEEeCCCcccccCCCccc
Q psy17690 219 DLLNRDLKKVIAVDWNTHSLSKNRENAL 246 (545)
Q Consensus 219 ~~L~Rdl~kvIivDd~~~s~~~qp~N~I 246 (545)
.++-| |+|||++.+...-...|+
T Consensus 134 -~v~~D----vlIDD~~~n~~~~~~~g~ 156 (191)
T PF06941_consen 134 -LVGGD----VLIDDRPHNLEQFANAGI 156 (191)
T ss_dssp -GC--S----EEEESSSHHHSS-SSESS
T ss_pred -eEecc----EEecCChHHHHhccCCCc
Confidence 34444 789999988766555563
No 170
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=55.54 E-value=3.3 Score=42.28 Aligned_cols=91 Identities=10% Similarity=0.045 Sum_probs=67.9
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.+..++|+.+. ..+.+.|.|++.. .++..+++++.-. .+|+..+..+.+.... ..|.+=+.++|-+.
T Consensus 112 pg~~e~L~~L~~~g~~l~I~Tn~~~--------~~~~~~l~~~gl~-~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p 182 (260)
T PLN03243 112 PGSREFVQALKKHEIPIAVASTRPR--------RYLERAIEAVGME-GFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIP 182 (260)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCcCH--------HHHHHHHHHcCCH-hhCcEEEecccCCCCCCCHHHHHHHHHHhCCCh
Confidence 35667777765 3588889999977 7899999998766 6799998888775321 24556677889999
Q ss_pred CcEEEEeCCCcccccCCCCeeecc
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIP 405 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~ 405 (545)
+++|+|+|++.-+..--..|+.+.
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEE
Confidence 999999999886655555666543
No 171
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=55.15 E-value=17 Score=34.46 Aligned_cols=49 Identities=22% Similarity=0.444 Sum_probs=33.2
Q ss_pred EEEecccccccccccc-----ccccccccCCcHHHHHHHhcCCCCCCCCCCceEEEEEeccCC
Q psy17690 488 LLLEFRDLLVHPEWTY-----NTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESG 545 (545)
Q Consensus 488 l~~~~~~~l~~~~~~~-----~~~~~~~krp~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 545 (545)
+-+++|+||+.+.... ..-|.+ .-|+|-.-|.++.. .-|.|||+|.+.|
T Consensus 3 a~fD~DgTLi~~~s~~~f~~~~~D~~~-~~~~v~~~L~~l~~--------~Gy~IvIvTNQ~g 56 (159)
T PF08645_consen 3 AFFDLDGTLIKTKSGKKFPKDPDDWKF-FPPGVPEALRELHK--------KGYKIVIVTNQSG 56 (159)
T ss_dssp EEE-SCTTTEE-STSTTS-SSTCGGEE-C-TTHHHHHHHHHH--------TTEEEEEEEE-CC
T ss_pred EEEeCCCCccCCCCCCcCcCCHHHhhh-cchhHHHHHHHHHh--------cCCeEEEEeCccc
Confidence 4689999999997522 233444 23579999999973 4699999998876
No 172
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=55.01 E-value=21 Score=37.02 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=43.0
Q ss_pred CCCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceE--EEEEcCCChhcHHHHHH
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFE--VVIFTSESGLSIAPILE 189 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yE--ivIfTa~~~~ya~~il~ 189 (545)
..++.+++||.||||++-- .+......=+++-.-|..|+. .+. ++|.|.-+..-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~---~~p~~a~~~~~l~~lL~~Las---------~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIV---PHPEAAVPDDRLLSLLQDLAS---------DPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccc---cCccccCCCHHHHHHHHHHHh---------cCCCeEEEEeCCCHHHHHHhcC
Confidence 3568899999999999862 222334555678889999997 666 66777766666666665
No 173
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=54.70 E-value=8.7 Score=36.44 Aligned_cols=27 Identities=22% Similarity=0.517 Sum_probs=22.9
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES 180 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~ 180 (545)
...-||...-++.|.. .|+|.|-||+.
T Consensus 67 L~V~p~aq~v~keLt~---------~y~vYivtaam 93 (180)
T COG4502 67 LGVQPFAQTVLKELTS---------IYNVYIVTAAM 93 (180)
T ss_pred cCccccHHHHHHHHHh---------hheEEEEEecc
Confidence 3566888889999986 99999999994
No 174
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=53.84 E-value=17 Score=37.32 Aligned_cols=89 Identities=12% Similarity=0.096 Sum_probs=58.0
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccCCcE
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKV 384 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL~~v 384 (545)
.++.++|+.+. +.+.+.|.|++.. .++..+++.++-. .+|+.....+....+.-.+.+=+..+|-+.+++
T Consensus 145 pg~~e~L~~L~~~gi~laIvSn~~~--------~~~~~~L~~~gl~-~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~ 215 (273)
T PRK13225 145 PGVADLLAQLRSRSLCLGILSSNSR--------QNIEAFLQRQGLR-SLFSVVQAGTPILSKRRALSQLVAREGWQPAAV 215 (273)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHcCCh-hheEEEEecCCCCCCHHHHHHHHHHhCcChhHE
Confidence 46777777775 4578888898877 8999999998866 567766544332111112223334557788999
Q ss_pred EEEeCCCcccccCCCCeee
Q psy17690 385 IAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 385 IiIDn~p~s~~~qp~NgI~ 403 (545)
|+|+|++.-...--..|+.
T Consensus 216 l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 216 MYVGDETRDVEAARQVGLI 234 (273)
T ss_pred EEECCCHHHHHHHHHCCCe
Confidence 9999998754443344554
No 175
>PHA02597 30.2 hypothetical protein; Provisional
Probab=53.76 E-value=7.5 Score=37.06 Aligned_cols=92 Identities=16% Similarity=0.107 Sum_probs=54.0
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCC---ceeeeEeecCcceeEeCceeeecccccccCC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKEN---KYFYFKLFRDSTEFVDGHHVKNLDLLNRDLK 382 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~---~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL~ 382 (545)
.++.+.|+++.+.+.+.+.|++.. .....++..+.-.+ .+|++.+..+++..+...+.+=++.+| .+
T Consensus 77 pG~~e~L~~L~~~~~~~i~Tn~~~--------~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 77 DDALDVINKLKEDYDFVAVTALGD--------SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred CCHHHHHHHHHhcCCEEEEeCCcc--------chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 466777777766565555565533 22223444442211 256677766666543334444566667 67
Q ss_pred cEEEEeCCCcccccCCCC--eeeccCC
Q psy17690 383 KVIAVDWNTHSLSKNREN--ALIIPRW 407 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~N--gI~I~~w 407 (545)
.+|+|||++.....--.+ ||..--+
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 899999999876555556 6655433
No 176
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=53.55 E-value=14 Score=36.40 Aligned_cols=77 Identities=14% Similarity=0.237 Sum_probs=50.2
Q ss_pred CCCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHH------hhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFE------TLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~------~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
.+++.++-+|+|+|++.++--+.+|- -+.-||-++||. .+.+| |. .|- -.+++|..+++.=
T Consensus 60 G~~Pi~VsFDIDDTvLFsSp~F~~Gk-~~~sPgs~DyLknq~FW~~vn~g---~D---~~S------IPKevA~qLI~MH 126 (237)
T COG3700 60 GRPPIAVSFDIDDTVLFSSPGFWRGK-KYFSPGSEDYLKNQVFWEKVNNG---WD---EFS------IPKEVARQLIDMH 126 (237)
T ss_pred CCCCeeEeeccCCeeEecccccccCc-cccCCChHHhhcCHHHHHHHhcC---Cc---ccc------chHHHHHHHHHHH
Confidence 47789999999999999865555553 266788877664 44431 11 232 2678899988876
Q ss_pred cCCCceeeEEEecCcc
Q psy17690 192 DKENKYFYFKLFRDST 207 (545)
Q Consensus 192 Dp~~~~i~~rl~R~~c 207 (545)
-..+.-|-+.-.|..+
T Consensus 127 q~RGD~i~FvTGRt~g 142 (237)
T COG3700 127 QRRGDAIYFVTGRTPG 142 (237)
T ss_pred HhcCCeEEEEecCCCC
Confidence 5534455555455554
No 177
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=53.20 E-value=2.6 Score=43.07 Aligned_cols=88 Identities=11% Similarity=-0.036 Sum_probs=58.7
Q ss_pred HHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcce-------eEeC---ceeeecccc
Q psy17690 309 LEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTE-------FVDG---HHVKNLDLL 377 (545)
Q Consensus 309 ~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~-------~~~g---~~vKDLs~L 377 (545)
.++|+.+. ..+.+.+.|+..+ ..+..+++.|...+.+|+.....+.+. .... .+.+-|..+
T Consensus 193 ~~~l~~l~~~g~~i~i~T~r~~--------~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 193 VELVKMYKAAGYEIIVVSGRDG--------VCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred HHHHHHHHhCCCEEEEEeCCCh--------hhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 33444443 3477888898877 788999999998865777776666211 1000 123345556
Q ss_pred cc-cCCcEEEEeCCCcccccCCCCeeec
Q psy17690 378 NR-DLKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 378 gR-dL~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+. +.+.+|+|||++.-...--.+||++
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 77 6799999999998766656677664
No 178
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=51.98 E-value=9.3 Score=36.83 Aligned_cols=88 Identities=18% Similarity=0.206 Sum_probs=58.7
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.+..++|+.+. +.+.+.|.|++.. .++..++++++-. .+|+..+..+++.... ..+.+=+..+|-+.
T Consensus 96 ~g~~~~l~~l~~~g~~~~i~S~~~~--------~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 166 (226)
T PRK13222 96 PGVKETLAALKAAGYPLAVVTNKPT--------PFVAPLLEALGIA-DYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDP 166 (226)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHcCCc-cCccEEEcCCCCCCCCcChHHHHHHHHHcCCCh
Confidence 35666777665 3588889999977 7888999988765 5677665554432111 12344456678889
Q ss_pred CcEEEEeCCCcccccCCCCee
Q psy17690 382 KKVIAVDWNTHSLSKNRENAL 402 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI 402 (545)
+++|+|+|++.-+..--..|+
T Consensus 167 ~~~i~igD~~~Di~~a~~~g~ 187 (226)
T PRK13222 167 EEMLFVGDSRNDIQAARAAGC 187 (226)
T ss_pred hheEEECCCHHHHHHHHHCCC
Confidence 999999999875544333444
No 179
>PLN02940 riboflavin kinase
Probab=51.66 E-value=18 Score=38.99 Aligned_cols=89 Identities=9% Similarity=0.033 Sum_probs=61.5
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHh-hccCCCceeeeEeecCcceeE---eCceeeeccccccc
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILE-ALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRD 380 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild-~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRd 380 (545)
.+..++|+.+. ..+.+.|-|++.. .++..+++ ..+-. .+|+..+..+++... ...|.+=++.+|-+
T Consensus 96 pGv~elL~~Lk~~g~~l~IvTn~~~--------~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 96 PGANRLIKHLKSHGVPMALASNSPR--------ANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred cCHHHHHHHHHHCCCcEEEEeCCcH--------HHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 45667777764 4577888898876 67777776 45544 679999998887532 12455557778888
Q ss_pred CCcEEEEeCCCcccccCCCCeee
Q psy17690 381 LKKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 381 L~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
.+++|+|+|++.-...--..|+.
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCE
Confidence 99999999999755433344443
No 180
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=50.69 E-value=5.4 Score=38.87 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=63.9
Q ss_pred hHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccCC
Q psy17690 307 PILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDLK 382 (545)
Q Consensus 307 e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL~ 382 (545)
+..++|+.+. +.+.+.|.|++.. ..++.+++++.-. .+|+..+.++...... ..+..=+..+|-+.+
T Consensus 96 g~~~~l~~l~~~g~~~~i~S~~~~--------~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (222)
T PRK10826 96 GVREALALCKAQGLKIGLASASPL--------HMLEAVLTMFDLR-DYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPL 166 (222)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCcH--------HHHHHHHHhCcch-hcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHH
Confidence 5666777764 4588888999876 7888999988766 6788877776543211 144555677799999
Q ss_pred cEEEEeCCCcccccCCCCeeecc
Q psy17690 383 KVIAVDWNTHSLSKNRENALIIP 405 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~NgI~I~ 405 (545)
++++|+|++.-...--..|+..-
T Consensus 167 ~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 167 TCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred HeEEEcCChhhHHHHHHcCCEEE
Confidence 99999999976555445555543
No 181
>PLN02423 phosphomannomutase
Probab=50.36 E-value=18 Score=36.51 Aligned_cols=54 Identities=22% Similarity=0.351 Sum_probs=34.3
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+..+++||||||+.++- ..-|...+-++.+.+ ...+++-|.-+ ...+.+.+.+
T Consensus 6 ~~~i~~~D~DGTLl~~~~--------~i~~~~~~ai~~l~~---------~i~fviaTGR~---~~~~~~~~~~ 59 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK--------EATPEMLEFMKELRK---------VVTVGVVGGSD---LSKISEQLGK 59 (245)
T ss_pred cceEEEEeccCCCcCCCC--------cCCHHHHHHHHHHHh---------CCEEEEECCcC---HHHHHHHhcc
Confidence 345566999999997732 233555667777776 56666666553 3455555554
No 182
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=49.76 E-value=5.1 Score=36.22 Aligned_cols=68 Identities=16% Similarity=0.051 Sum_probs=42.8
Q ss_pred ceeEEEEecch-hHHHHhcCCCCcHHHHHhhccCC------CceeeeEeecCcceeEeCceeeeccccc--ccCCcEEEE
Q psy17690 317 KYFYFKLFRDS-TEFVEALYPPQSIAPILEALDKE------NKYFYFKLFRDSTEFVDGHHVKNLDLLN--RDLKKVIAV 387 (545)
Q Consensus 317 k~fe~~lfTAs-~~~~~~ly~~~YAd~Ild~LDp~------~~~~~~rLyR~~C~~~~g~~vKDLs~Lg--RdL~~vIiI 387 (545)
..+.+.|.|++ .. .++..+++...+. ..+|+.....+.. .....+.+=+..+| -+.+++++|
T Consensus 44 ~g~~l~i~Sn~~~~--------~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~i 114 (128)
T TIGR01681 44 NGFLLALASYNDDP--------HVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFV 114 (128)
T ss_pred CCeEEEEEeCCCCH--------HHHHHHHHhccccccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEE
Confidence 45788888888 55 6787888776521 1344544433221 11223444456678 899999999
Q ss_pred eCCCcc
Q psy17690 388 DWNTHS 393 (545)
Q Consensus 388 Dn~p~s 393 (545)
||++..
T Consensus 115 gDs~~n 120 (128)
T TIGR01681 115 DDRPDN 120 (128)
T ss_pred CCCHhH
Confidence 999865
No 183
>PLN02151 trehalose-phosphatase
Probab=49.59 E-value=16 Score=39.28 Aligned_cols=58 Identities=10% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHH
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPIL 188 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il 188 (545)
.++..|+||+||||+-- .. ..-....-|.+.+-|+.|++ .+.++|-|--...-++.++
T Consensus 96 ~~~~ll~lDyDGTL~PI--v~-~P~~A~~~~~~~~aL~~La~---------~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPI--VD-DPDRAFMSKKMRNTVRKLAK---------CFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCceEEEEecCccCCCC--CC-CcccccCCHHHHHHHHHHhc---------CCCEEEEECCCHHHHHHHc
Confidence 35789999999999921 11 11123566889999999997 6788888877766665555
No 184
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=49.56 E-value=15 Score=35.40 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=59.0
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccCC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDLK 382 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL~ 382 (545)
.+..++|+.+.+.|.+.|.|++.. .++...+.++-=. .+|+..++.+.+.... ..|-.=+..+|-+.+
T Consensus 102 ~~~~~~L~~l~~~~~l~ilTNg~~--------~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~ 172 (229)
T COG1011 102 PEALEALKELGKKYKLGILTNGAR--------PHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPE 172 (229)
T ss_pred hhHHHHHHHHHhhccEEEEeCCCh--------HHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcc
Confidence 456667777666699999999754 5677888877633 6788888877776321 244556777898899
Q ss_pred cEEEEeCCCccc
Q psy17690 383 KVIAVDWNTHSL 394 (545)
Q Consensus 383 ~vIiIDn~p~s~ 394 (545)
+++.|||+..+-
T Consensus 173 ~~l~VgD~~~~d 184 (229)
T COG1011 173 EALFVGDSLEND 184 (229)
T ss_pred eEEEECCChhhh
Confidence 999999999765
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=49.40 E-value=18 Score=35.98 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=50.5
Q ss_pred eeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceec---CcccccccccC
Q psy17690 146 KKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLN 222 (545)
Q Consensus 146 ~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~---g~~vKdL~~L~ 222 (545)
..-||+.++|+.|.+ .|-++|-|++... ++.+.- ..+|.+.+..+...... ..+.+=+.++|
T Consensus 113 ~~~~gv~~~L~~L~~---------~~~l~i~Tn~~~~-----~~~~gl-~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~ 177 (238)
T PRK10748 113 DVPQATHDTLKQLAK---------KWPLVAITNGNAQ-----PELFGL-GDYFEFVLRAGPHGRSKPFSDMYHLAAEKLN 177 (238)
T ss_pred CCCccHHHHHHHHHc---------CCCEEEEECCCch-----HHHCCc-HHhhceeEecccCCcCCCcHHHHHHHHHHcC
Confidence 344899999999987 5899999998764 233333 45666666544332211 12345566788
Q ss_pred cCCCcEEEEeCCC
Q psy17690 223 RDLKKVIAVDWNT 235 (545)
Q Consensus 223 Rdl~kvIivDd~~ 235 (545)
-+.+++|+|-|++
T Consensus 178 ~~~~~~~~VGD~~ 190 (238)
T PRK10748 178 VPIGEILHVGDDL 190 (238)
T ss_pred CChhHEEEEcCCc
Confidence 8999999998884
No 186
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=48.82 E-value=11 Score=38.52 Aligned_cols=89 Identities=11% Similarity=0.149 Sum_probs=59.3
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeC---ceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g---~~vKDLs~LgRdL 381 (545)
.+..++|+.+. +.+.+.|.|++.+ .++..+++++.-. .+|++..+.+.+..... .+-+=+..+|-+.
T Consensus 104 ~g~~e~L~~Lk~~g~~l~ivTn~~~--------~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~ 174 (272)
T PRK13223 104 PGVRDTLKWLKKQGVEMALITNKPE--------RFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPP 174 (272)
T ss_pred CCHHHHHHHHHHCCCeEEEEECCcH--------HHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCCh
Confidence 35566666653 4688888899876 6888899887765 57887766655432111 1223345668889
Q ss_pred CcEEEEeCCCcccccCCCCeee
Q psy17690 382 KKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
+++|+|+|++.-...--.+|+.
T Consensus 175 ~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 175 SQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred hHEEEECCCHHHHHHHHHCCCe
Confidence 9999999998765544455553
No 187
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=47.87 E-value=40 Score=31.67 Aligned_cols=79 Identities=13% Similarity=0.000 Sum_probs=49.5
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeec-CcceeEeCce------------e
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFR-DSTEFVDGHH------------V 371 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR-~~C~~~~g~~------------v 371 (545)
.++.++|+.+. +.+.+.|.|++.. .++.++++.+.-. .+|...+.- +........+ .
T Consensus 83 ~g~~e~l~~l~~~g~~~~IvS~~~~--------~~~~~~l~~~g~~-~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~ 153 (201)
T TIGR01491 83 DYAEELVRWLKEKGLKTAIVSGGIM--------CLAKKVAEKLNPD-YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVE 153 (201)
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCcH--------HHHHHHHHHhCCC-eEEEEEEEEcCCCeEecceeeEEccccHHHHHH
Confidence 45566666664 4688999999987 7889999988755 455444332 2222111111 1
Q ss_pred eecccccccCCcEEEEeCCCcc
Q psy17690 372 KNLDLLNRDLKKVIAVDWNTHS 393 (545)
Q Consensus 372 KDLs~LgRdL~~vIiIDn~p~s 393 (545)
+-+..+|.+.+++|+|.|+..-
T Consensus 154 ~~~~~~~~~~~~~i~iGDs~~D 175 (201)
T TIGR01491 154 RLKRELNPSLTETVAVGDSKND 175 (201)
T ss_pred HHHHHhCCCHHHEEEEcCCHhH
Confidence 1133457788999999999753
No 188
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=47.34 E-value=34 Score=32.29 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=63.3
Q ss_pred EEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCCCceeeEEEe
Q psy17690 124 LLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKENKYFYFKLF 203 (545)
Q Consensus 124 LVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~~~~i~~rl~ 203 (545)
+++..+.+++.. .+..-..||++.++|++|.+ ..+.++|.|......|..+.+.+.-....+..+.+
T Consensus 110 ~~~~~~~~~~~~-----~~~~d~~~~~~~~~l~~L~~--------~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~ 176 (215)
T PF00702_consen 110 IVLAVNLIFLGL-----FGLRDPLRPGAKEALQELKE--------AGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI 176 (215)
T ss_dssp EEEEESHEEEEE-----EEEEEEBHTTHHHHHHHHHH--------TTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE
T ss_pred cceeecCeEEEE-----EeecCcchhhhhhhhhhhhc--------cCcceeeeecccccccccccccccccccccccccc
Confidence 334445555544 23345789999999999987 35899999999999999999998762222222221
Q ss_pred cCccceecCcccccccccCcCCCcEEEEeCCCc
Q psy17690 204 RDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTH 236 (545)
Q Consensus 204 R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~ 236 (545)
+....-.+.+=+..|+.+.++|++|=|...
T Consensus 177 ---~kP~~k~~~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 177 ---GKPEPKIFLRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp ---TTTHHHHHHHHHHHHTCTGGGEEEEESSGG
T ss_pred ---ccccchhHHHHHHHHhcCCCEEEEEccCHH
Confidence 121111122333446767789999988764
No 189
>PLN03017 trehalose-phosphatase
Probab=46.47 E-value=20 Score=38.79 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=39.0
Q ss_pred CCCeEEEEeCCCeeE----eeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHH
Q psy17690 119 QPPYTLLLEFRDLLV----HPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPI 187 (545)
Q Consensus 119 ~~k~tLVLDLDeTLv----hs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~i 187 (545)
.++..|+||+||||+ +++- ...-|.+.+-|+.|++ .+.++|-|--...-+..+
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~-------a~i~~~~~~aL~~La~---------~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDK-------AFMSSKMRRTVKKLAK---------CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCccc-------ccCCHHHHHHHHHHhc---------CCcEEEEeCCCHHHHHHh
Confidence 357889999999999 3321 1345677788899987 678888888776666665
No 190
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=45.92 E-value=26 Score=33.95 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=59.5
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceee-eEeecCccee---EeCceeeecccccccC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFY-FKLFRDSTEF---VDGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~-~rLyR~~C~~---~~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. +.+.|.|++.. .+++.++++.+-. .+|+ ..+..++... ....|.+=+..+|-+.
T Consensus 91 ~gv~~~L~~L~--~~~~ivTn~~~--------~~~~~~l~~~~l~-~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p 159 (221)
T PRK10563 91 AGANALLESIT--VPMCVVSNGPV--------SKMQHSLGKTGML-HYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV 159 (221)
T ss_pred CCHHHHHHHcC--CCEEEEeCCcH--------HHHHHHHHhcChH-HhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence 36777888874 67778899977 7888888877665 4564 4555444321 1123455567778889
Q ss_pred CcEEEEeCCCcccccCCCCeeecc
Q psy17690 382 KKVIAVDWNTHSLSKNRENALIIP 405 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~I~ 405 (545)
+++|+|+|++.-...--..|+.+.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 160 ENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHeEEEeCcHhhHHHHHHCCCEEE
Confidence 999999999976544344555544
No 191
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=45.29 E-value=43 Score=34.18 Aligned_cols=57 Identities=11% Similarity=0.213 Sum_probs=37.2
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
-+..+.+|||+|||-+.+..+.-. .-+..+.. -.|+||..||-+..-....-+.|+-
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~---------pv~~el~d--------~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAA---------PVLLELKD--------AGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccc---------hHHHHHHH--------cCCeEEEeccchHHHHHHHHHhcCC
Confidence 366889999999998654433221 11233332 2699999998886555566666775
No 192
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=44.66 E-value=12 Score=36.88 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=58.1
Q ss_pred hHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccCC
Q psy17690 307 PILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDLK 382 (545)
Q Consensus 307 e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL~ 382 (545)
+..++|+.+.+ .+.+.|.|++.. .++..++++++-. .+|+.....+++... ...+.+=++.+|-+.+
T Consensus 99 g~~~~L~~L~~~g~~l~i~Tn~~~--------~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~ 169 (229)
T PRK13226 99 GVEGMLQRLECAGCVWGIVTNKPE--------YLARLILPQLGWE-QRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPT 169 (229)
T ss_pred CHHHHHHHHHHCCCeEEEECCCCH--------HHHHHHHHHcCch-hcccEEEecCcCCCCCCCHHHHHHHHHHhCCChh
Confidence 55566666533 467778898866 6777888888765 567777666655321 1135566778898999
Q ss_pred cEEEEeCCCcccccCCCCeee
Q psy17690 383 KVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~NgI~ 403 (545)
++|+|+|++.-...--..|+.
T Consensus 170 ~~l~IGDs~~Di~aA~~aG~~ 190 (229)
T PRK13226 170 DCVYVGDDERDILAARAAGMP 190 (229)
T ss_pred hEEEeCCCHHHHHHHHHCCCc
Confidence 999999998754333333443
No 193
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=43.89 E-value=13 Score=35.35 Aligned_cols=76 Identities=12% Similarity=0.126 Sum_probs=51.2
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.+..++|+.+.+ .+.+.|.|++.. . +..+++.+.-. .+|+..+..+++.... ..|.+=++.+|-+.
T Consensus 108 ~g~~~~l~~L~~~g~~~~i~Sn~~~--------~-~~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~ 177 (203)
T TIGR02252 108 PDAIKLLKDLRERGLILGVISNFDS--------R-LRGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISP 177 (203)
T ss_pred cCHHHHHHHHHHCCCEEEEEeCCch--------h-HHHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCCh
Confidence 355666776654 488888898854 3 35677776554 5677777655543211 13455567779999
Q ss_pred CcEEEEeCCC
Q psy17690 382 KKVIAVDWNT 391 (545)
Q Consensus 382 ~~vIiIDn~p 391 (545)
+++|+|+|++
T Consensus 178 ~~~~~IgD~~ 187 (203)
T TIGR02252 178 EEALHIGDSL 187 (203)
T ss_pred hHEEEECCCc
Confidence 9999999987
No 194
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=42.54 E-value=15 Score=37.06 Aligned_cols=55 Identities=20% Similarity=0.280 Sum_probs=33.2
Q ss_pred CCeEEEEeCCCeeE-eeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 120 PPYTLLLEFRDLLV-HPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 120 ~k~tLVLDLDeTLv-hs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
|++.||-|||+||+ ... ..+.-+.++|+...+ +..-+++=|..+..-+..++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~---------~~~~~l~~~l~~~~~--------~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD---------EALARLEELLEQQAR--------PEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHH---------HHHHHHHHHHHHHHC--------CGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCH---------HHHHHHHHHHHHhhC--------CCceEEEECCCCHHHHHHHHHhC
Confidence 47899999999999 221 122334455552223 36777777777777777777654
No 195
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.46 E-value=14 Score=41.40 Aligned_cols=149 Identities=10% Similarity=0.091 Sum_probs=73.7
Q ss_pred CCCCeEEEEeCCCeeEeeccc--cCcceeee---eCC---ChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHH
Q psy17690 118 YQPPYTLLLEFRDLLVHPEWT--YNTGWRFK---KRP---FVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILE 189 (545)
Q Consensus 118 ~~~k~tLVLDLDeTLvhs~~~--~~~g~~~~---kRP---gld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~ 189 (545)
...+++||||||+||.----. --.|.++. -=+ -+..|...+.+ + ..=+.|.|-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k----q----GVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK----Q----GVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh----c----cEEEEEecCCchhhHHHHHh
Confidence 456899999999999753110 01121111 001 13455555554 2 35555555555555555443
Q ss_pred HhcCCCceeeEEEe-cCccce-ecCc-ccccccccCcCCCcEEEEeCCCcccccCCCcc-ccccCCCCCCCc--chHHHH
Q psy17690 190 ALDKENKYFYFKLF-RDSTEF-VDGH-HVKNLDLLNRDLKKVIAVDWNTHSLSKNRENA-LIIPRWNGNDDD--RTLVDL 263 (545)
Q Consensus 190 ~LDp~~~~i~~rl~-R~~c~~-~~g~-~vKdL~~L~Rdl~kvIivDd~~~s~~~qp~N~-I~I~~~~g~~~D--~eL~~L 263 (545)
+ .| +-++..--+ --.|.+ ..+. .-|=.++||=.++-+|.|||+|.....-..++ +.+.+|-.|+.= ..++ +
T Consensus 291 k-hp-~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~Dps~~~~~~~-~ 367 (574)
T COG3882 291 K-HP-DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPEDPSFLRDPKN-S 367 (574)
T ss_pred h-CC-CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCCHHHHhhhhh-c
Confidence 2 22 111110000 001111 1122 22444567888999999999997665433333 677777666531 0111 3
Q ss_pred HHHHHHHHhcCCchH
Q psy17690 264 AVFLRTIAVNGVDDV 278 (545)
Q Consensus 264 ~~~L~~la~~~~~DV 278 (545)
.+++..++. ..+|-
T Consensus 368 ~~~f~~l~l-t~ED~ 381 (574)
T COG3882 368 SGLFSHLPL-TTEDL 381 (574)
T ss_pred cchhhcccc-chhhH
Confidence 455666654 34554
No 196
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=42.39 E-value=14 Score=35.26 Aligned_cols=74 Identities=9% Similarity=0.005 Sum_probs=53.2
Q ss_pred Hhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE--eCceeeecccccccCCcEEE
Q psy17690 310 EALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV--DGHHVKNLDLLNRDLKKVIA 386 (545)
Q Consensus 310 EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~--~g~~vKDLs~LgRdL~~vIi 386 (545)
+.|+.+. +.+.+.|.|++.+ .++..+++.+.-. .+|+..+..++...+ ...+.+=+..+|-+.+++|+
T Consensus 113 ~~L~~l~~~g~~~~i~T~~~~--------~~~~~~l~~~gl~-~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 113 GLLRELHRAPKGMAVVTGRPR--------KDAAKFLTTHGLE-ILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred HHHHHHHHcCCcEEEECCCCH--------HHHHHHHHHcCch-hhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 3444433 3578888999977 7899999998766 678888877765422 11345556777888999999
Q ss_pred EeCCCc
Q psy17690 387 VDWNTH 392 (545)
Q Consensus 387 IDn~p~ 392 (545)
|.|++.
T Consensus 184 vGD~~~ 189 (197)
T TIGR01548 184 VGDTVD 189 (197)
T ss_pred EeCCHH
Confidence 999874
No 197
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=42.36 E-value=6 Score=36.92 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=56.3
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+.+ .+.+.+-|++ .++..+++.+.-. ++|+..+..+.+... ...|.+=+..+|-+.
T Consensus 91 ~g~~~~l~~l~~~g~~i~i~S~~----------~~~~~~l~~~~l~-~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~ 159 (185)
T TIGR02009 91 PGIENFLKRLKKKGIAVGLGSSS----------KNADRILAKLGLT-DYFDAIVDADEVKEGKPHPETFLLAAELLGVSP 159 (185)
T ss_pred cCHHHHHHHHHHcCCeEEEEeCc----------hhHHHHHHHcChH-HHCCEeeehhhCCCCCCChHHHHHHHHHcCCCH
Confidence 367777777644 4677777766 3577888887765 578887776654321 113344466778889
Q ss_pred CcEEEEeCCCcccccCCCCee
Q psy17690 382 KKVIAVDWNTHSLSKNRENAL 402 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI 402 (545)
+++|+|+|++.-...--.+|+
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCC
Confidence 999999999865543333444
No 198
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=41.02 E-value=48 Score=30.73 Aligned_cols=81 Identities=16% Similarity=0.171 Sum_probs=46.5
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeC----------------
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDG---------------- 368 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g---------------- 368 (545)
.+..++|+.+.+ .+.+.|.|++.. .++..+++.++-. .+|+..+..+.....+|
T Consensus 75 ~g~~~ll~~l~~~g~~~~i~S~~~~--------~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 75 PGFKEFIAFIKEHGIDFIVISDGND--------FFIDPVLEGIGEK-DVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCcH--------HHHHHHHHHcCCh-hheeEEeccCceECCCCcEEEecCCCCccCcCC
Confidence 345555555533 478888899876 7888888887654 45666554332221111
Q ss_pred -ceee--eccccccc-CCcEEEEeCCCcccc
Q psy17690 369 -HHVK--NLDLLNRD-LKKVIAVDWNTHSLS 395 (545)
Q Consensus 369 -~~vK--DLs~LgRd-L~~vIiIDn~p~s~~ 395 (545)
...| =+..+... .+++|.|+|+..-+.
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~ 176 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVC 176 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhc
Confidence 1112 12222333 678888888876543
No 199
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=40.57 E-value=15 Score=36.55 Aligned_cols=91 Identities=10% Similarity=0.023 Sum_probs=62.0
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccc-c
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNR-D 380 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgR-d 380 (545)
.++.++|+.+.+ .+.+.|-|++.. .++..+++++.-.+.++++.+..+..... ...|.+=+..+|- +
T Consensus 102 pg~~e~L~~L~~~g~~l~IvT~~~~--------~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 102 PGVIEVIAYLRARGIKIGSTTGYTR--------EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred CCHHHHHHHHHHCCCeEEEECCCcH--------HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 366777777644 578888899877 78889999887663224777776654321 1245566677886 4
Q ss_pred CCcEEEEeCCCcccccCCCCeeec
Q psy17690 381 LKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 381 L~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
.+++|+|.|++.-...--..|+..
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeE
Confidence 899999999997555444555543
No 200
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=39.74 E-value=11 Score=35.02 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=51.3
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccCC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDLK 382 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL~ 382 (545)
.+..+.|++ +.|.|++.. .++..+++++.-. .+|+..+..+.+... ...|.+=++.+|-+.+
T Consensus 93 ~g~~~~L~~------~~i~Tn~~~--------~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~ 157 (175)
T TIGR01493 93 PDSAAALAR------VAILSNASH--------WAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPD 157 (175)
T ss_pred CchHHHHHH------HhhhhCCCH--------HHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHH
Confidence 466677763 557788876 7888888887655 678877766654321 1245666788899999
Q ss_pred cEEEEeCCCc
Q psy17690 383 KVIAVDWNTH 392 (545)
Q Consensus 383 ~vIiIDn~p~ 392 (545)
++|+|+|++.
T Consensus 158 ~~l~vgD~~~ 167 (175)
T TIGR01493 158 RVLMVAAHQW 167 (175)
T ss_pred HeEeEecChh
Confidence 9999999964
No 201
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=38.97 E-value=14 Score=36.75 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=44.8
Q ss_pred hhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccCC
Q psy17690 306 APILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDLK 382 (545)
Q Consensus 306 ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL~ 382 (545)
.+..+.|+.+.+.+.+.|.|++.. . ++...-. .+|++.+..+..... ...|.+=+..+|-+.+
T Consensus 116 ~gv~~~L~~L~~~~~l~i~Tn~~~--------~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 181 (238)
T PRK10748 116 QATHDTLKQLAKKWPLVAITNGNA--------Q-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIG 181 (238)
T ss_pred ccHHHHHHHHHcCCCEEEEECCCc--------h-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChh
Confidence 356777777777788888898754 1 2333322 456666544433211 1133444667788999
Q ss_pred cEEEEeCCC
Q psy17690 383 KVIAVDWNT 391 (545)
Q Consensus 383 ~vIiIDn~p 391 (545)
++|+|.|++
T Consensus 182 ~~~~VGD~~ 190 (238)
T PRK10748 182 EILHVGDDL 190 (238)
T ss_pred HEEEEcCCc
Confidence 999998885
No 202
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=38.74 E-value=17 Score=35.65 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=52.9
Q ss_pred ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeC---ceeeecccccccCCcEEEEeCCCcc
Q psy17690 317 KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDG---HHVKNLDLLNRDLKKVIAVDWNTHS 393 (545)
Q Consensus 317 k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g---~~vKDLs~LgRdL~~vIiIDn~p~s 393 (545)
+.|.+.|-|+..+ ..++.+++.++-. .+|+.....+.+..... .+..=+..+|.+.+++|+|=|+..-
T Consensus 104 ~g~~l~i~T~k~~--------~~~~~~l~~~gl~-~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~D 174 (220)
T COG0546 104 AGYKLGIVTNKPE--------RELDILLKALGLA-DYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLND 174 (220)
T ss_pred CCCeEEEEeCCcH--------HHHHHHHHHhCCc-cccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHH
Confidence 3467778888776 8999999998887 67888876333332221 3345566778876799999999875
Q ss_pred cccCCCCeee
Q psy17690 394 LSKNRENALI 403 (545)
Q Consensus 394 ~~~qp~NgI~ 403 (545)
...=-..|++
T Consensus 175 i~aA~~Ag~~ 184 (220)
T COG0546 175 ILAAKAAGVP 184 (220)
T ss_pred HHHHHHcCCC
Confidence 5443344443
No 203
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=37.36 E-value=71 Score=31.79 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=36.7
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
++.|||..+|.+.+.. +.-.++|-|||...|..+++..|=-
T Consensus 72 i~Idp~fKef~e~ike--------~di~fiVvSsGm~~fI~~lfe~ivg 112 (220)
T COG4359 72 IKIDPGFKEFVEWIKE--------HDIPFIVVSSGMDPFIYPLFEGIVG 112 (220)
T ss_pred cccCccHHHHHHHHHH--------cCCCEEEEeCCCchHHHHHHHhhcc
Confidence 6899999999999986 5788999999999999999998853
No 204
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=37.13 E-value=48 Score=34.60 Aligned_cols=66 Identities=12% Similarity=0.065 Sum_probs=43.1
Q ss_pred CCeEEEEeCCCeeEeec-cccC----------ccee--------eeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCC
Q psy17690 120 PPYTLLLEFRDLLVHPE-WTYN----------TGWR--------FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES 180 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~-~~~~----------~g~~--------~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~ 180 (545)
++-.+|||+|||++... +... ..|. ..-=|+.-+|++++.+ ..+.|++-|.-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~--------~G~kIf~VSgR~ 171 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS--------LGFKIIFLSGRL 171 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH--------CCCEEEEEeCCc
Confidence 36799999999999431 1101 1132 1224677888888875 478888888887
Q ss_pred hhcHHHHHHHhcC
Q psy17690 181 GLSIAPILEALDK 193 (545)
Q Consensus 181 ~~ya~~il~~LDp 193 (545)
...-+.-++.|-.
T Consensus 172 e~~r~aT~~NL~k 184 (275)
T TIGR01680 172 KDKQAVTEANLKK 184 (275)
T ss_pred hhHHHHHHHHHHH
Confidence 7665556666654
No 205
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=36.54 E-value=25 Score=35.17 Aligned_cols=38 Identities=5% Similarity=-0.006 Sum_probs=26.4
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcC
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNG 160 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~ 160 (545)
++..|+||+||||+-..-.+. ....=|.+.+-|..|++
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~---~~~~~~~~~~~L~~L~~ 39 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD---AAVVSDRLLTILQKLAA 39 (244)
T ss_pred CcEEEEEecCccccCCcCCCc---ccCCCHHHHHHHHHHHh
Confidence 367899999999995421111 12445778888999986
No 206
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=35.68 E-value=15 Score=36.35 Aligned_cols=88 Identities=9% Similarity=0.007 Sum_probs=58.0
Q ss_pred hHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccCC
Q psy17690 307 PILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDLK 382 (545)
Q Consensus 307 e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL~ 382 (545)
+..+.|+.+.+ .+.+.|-|++.. .++...++.+.-. .+|++.+..+..... ...|.+=+.++|-+.+
T Consensus 97 g~~e~L~~Lk~~g~~~~i~Tn~~~--------~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~ 167 (224)
T PRK14988 97 DTVPFLEALKASGKRRILLTNAHP--------HNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAE 167 (224)
T ss_pred CHHHHHHHHHhCCCeEEEEeCcCH--------HHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChH
Confidence 44555555543 577788898866 6777788876654 567877765544311 1134455677899999
Q ss_pred cEEEEeCCCcccccCCCCeee
Q psy17690 383 KVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 383 ~vIiIDn~p~s~~~qp~NgI~ 403 (545)
++|+|+|++..+..--.+|+.
T Consensus 168 ~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 168 RTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HEEEEcCCHHHHHHHHHcCCe
Confidence 999999999765444455654
No 207
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=34.62 E-value=53 Score=30.08 Aligned_cols=50 Identities=22% Similarity=0.297 Sum_probs=36.5
Q ss_pred eEEEecccccccccc-ccccccc-cccCCcHHHHHHHhcCCCCCCCCCCceEEEEEeccC
Q psy17690 487 TLLLEFRDLLVHPEW-TYNTGWR-FKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSES 544 (545)
Q Consensus 487 ~l~~~~~~~l~~~~~-~~~~~~~-~~krp~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 544 (545)
+|.+++++||+.-.= .|...|. .+-.||+..+|++|.. ..|-++|-|+.+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~--------~g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA--------AGYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH--------CCCEEEEEeCCC
Confidence 588999999986431 2444443 3458999999999963 569999998743
No 208
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=33.29 E-value=22 Score=32.21 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=49.3
Q ss_pred hHHHhhhcc-cceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE--eCceeeecccccccCCc
Q psy17690 307 PILEALDKE-NKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV--DGHHVKNLDLLNRDLKK 383 (545)
Q Consensus 307 e~~EfL~kl-sk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~--~g~~vKDLs~LgRdL~~ 383 (545)
+..++|+.+ .+.+.+.|.|++.+ ..+..++..+ -. .+|...+..+++..+ ...|.+=+..+|-+. +
T Consensus 68 g~~e~l~~L~~~g~~~~i~T~~~~--------~~~~~~~~~~-l~-~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~ 136 (154)
T TIGR01549 68 GAADLLKRLKEAGIKLGIISNGSL--------RAQKLLLRKH-LG-DYFDLILGSDEFGAKPEPEIFLAALESLGLPP-E 136 (154)
T ss_pred CHHHHHHHHHHCcCeEEEEeCCch--------HHHHHHHHHH-HH-hcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-C
Confidence 455555555 34578888899977 7788888874 22 457777776665411 113444466678777 9
Q ss_pred EEEEeCCCc
Q psy17690 384 VIAVDWNTH 392 (545)
Q Consensus 384 vIiIDn~p~ 392 (545)
+|+|.|++.
T Consensus 137 ~l~iGDs~~ 145 (154)
T TIGR01549 137 VLHVGDNLN 145 (154)
T ss_pred EEEEeCCHH
Confidence 999999964
No 209
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=32.90 E-value=31 Score=34.74 Aligned_cols=90 Identities=11% Similarity=0.024 Sum_probs=60.2
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccc-c
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNR-D 380 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgR-d 380 (545)
.++.+.|+.+. +.+.+.|-|++.+ ..+..+++.+.-.+-++++.++.+++... ...|.+=+..+|- +
T Consensus 104 pg~~elL~~L~~~g~~l~I~T~~~~--------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 104 PGVLEVIAALRARGIKIGSTTGYTR--------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred CCHHHHHHHHHHCCCEEEEEcCCcH--------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 35666676664 4588888898877 67788888766553234777777765422 1245556777786 4
Q ss_pred CCcEEEEeCCCcccccCCCCeee
Q psy17690 381 LKKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 381 L~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
.+.+|+|+|++.-+..--..|+.
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCE
Confidence 68999999999755544455554
No 210
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=32.52 E-value=11 Score=35.05 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=52.4
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcce---eEeCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTE---FVDGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~---~~~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. ..+.+.|-|++ ..+..+++++.-. .+|++.+..++-. .....|.+=+..+|-+.
T Consensus 90 pg~~~~L~~L~~~g~~~~i~s~~----------~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~ 158 (185)
T TIGR01990 90 PGIKNLLDDLKKNNIKIALASAS----------KNAPTVLEKLGLI-DYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSP 158 (185)
T ss_pred ccHHHHHHHHHHCCCeEEEEeCC----------ccHHHHHHhcCcH-hhCcEEEehhhcCCCCCChHHHHHHHHHcCCCH
Confidence 35666666664 44677777765 2345678887765 5677776544211 11113455567778889
Q ss_pred CcEEEEeCCCcccccCCCCee
Q psy17690 382 KKVIAVDWNTHSLSKNRENAL 402 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI 402 (545)
+++|+|+|++.-+..--.+|+
T Consensus 159 ~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 159 SECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred HHeEEEecCHHHHHHHHHcCC
Confidence 999999999865433333333
No 211
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=32.42 E-value=45 Score=32.97 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=59.8
Q ss_pred hhHHHhhhcccce-eEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKENKY-FYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~klsk~-fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.+..++|+.+.+. .-+.+=|.|.. .-+..+++.+.-. .+|....++++.... -..|.+=...||.++
T Consensus 89 pGv~~~l~~L~~~~i~~avaS~s~~--------~~~~~~L~~~gl~-~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 89 PGVVELLEQLKARGIPLAVASSSPR--------RAAERVLARLGLL-DYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred ccHHHHHHHHHhcCCcEEEecCChH--------HHHHHHHHHccCh-hhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 3667777776655 55555566654 5677888888776 678888888877643 125788889999999
Q ss_pred CcEEEEeCCCcccc
Q psy17690 382 KKVIAVDWNTHSLS 395 (545)
Q Consensus 382 ~~vIiIDn~p~s~~ 395 (545)
++.|.|+|++.-..
T Consensus 160 ~~CvviEDs~~Gi~ 173 (221)
T COG0637 160 EECVVVEDSPAGIQ 173 (221)
T ss_pred HHeEEEecchhHHH
Confidence 99999999997543
No 212
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=31.94 E-value=43 Score=31.87 Aligned_cols=91 Identities=16% Similarity=0.114 Sum_probs=51.7
Q ss_pred hhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeec-CcceeE-----eC-ceeeecccc
Q psy17690 305 IAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFR-DSTEFV-----DG-HHVKNLDLL 377 (545)
Q Consensus 305 Q~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR-~~C~~~-----~g-~~vKDLs~L 377 (545)
..+..++|+.+.+.+.+.|-|++.. .+++.+++++.-. .+|...+.- +..... .+ ....=+..+
T Consensus 70 ~pg~~e~L~~L~~~~~~~IvS~~~~--------~~~~~~l~~~gl~-~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 70 LPGAVEFLDWLRERFQVVILSDTFY--------EFAGPLMRQLGWP-TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred CCCHHHHHHHHHhcCCEEEEeCCcH--------HHHHHHHHHcCCc-hhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence 3566667777665577888899988 8899999988754 345433321 111000 00 000012233
Q ss_pred cccCCcEEEEeCCCcccccCCCCeeec
Q psy17690 378 NRDLKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 378 gRdL~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+...+++|+|-|+..-+.....+|+.|
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 444578999999987553333344444
No 213
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=31.14 E-value=68 Score=31.29 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=50.5
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhc-cCCCceee--eEeecCcceeE------------eC-
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEAL-DKENKYFY--FKLFRDSTEFV------------DG- 368 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~L-Dp~~~~~~--~rLyR~~C~~~------------~g- 368 (545)
.+..|+|+.+. ..+.+.|.|++.. .|+.++++++ ... .++. ..+-.+..... .|
T Consensus 77 pG~~e~l~~l~~~g~~~~IvS~~~~--------~~i~~il~~~~~~~-~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 77 EGFHEFVQFVKENNIPFYVVSGGMD--------FFVYPLLQGLIPKE-QIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred cCHHHHHHHHHHcCCeEEEECCCcH--------HHHHHHHHHhCCcC-cEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 45566666653 5588889999987 8999999886 222 3332 12211111100 00
Q ss_pred ceeeecccccccCCcEEEEeCCCcccccCCCCeee
Q psy17690 369 HHVKNLDLLNRDLKKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 369 ~~vKDLs~LgRdL~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
...+=+..++.+.+++|+|.|+..-...-...++.
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcc
Confidence 11223344566778899999998755443344553
No 214
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=31.02 E-value=22 Score=34.33 Aligned_cols=89 Identities=10% Similarity=0.015 Sum_probs=59.8
Q ss_pred hHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCC-CceeeeEeecCccee---EeCceeeeccccccc-
Q psy17690 307 PILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKE-NKYFYFKLFRDSTEF---VDGHHVKNLDLLNRD- 380 (545)
Q Consensus 307 e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~-~~~~~~rLyR~~C~~---~~g~~vKDLs~LgRd- 380 (545)
+..++|+.+. +.+.+.|-|++.. .++..+++.+.-. +.+|+..++.+.-.. ....+.+=+.++|-.
T Consensus 91 G~~~~L~~L~~~g~~~~ivT~~~~--------~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~ 162 (220)
T TIGR03351 91 GAEEAFRSLRSSGIKVALTTGFDR--------DTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQD 162 (220)
T ss_pred CHHHHHHHHHHCCCEEEEEeCCch--------HHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCC
Confidence 6677888874 5688889999977 7888999887743 257887776654221 111233335667765
Q ss_pred CCcEEEEeCCCcccccCCCCeee
Q psy17690 381 LKKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 381 L~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
.+++|+|+|++.-...--..|+.
T Consensus 163 ~~~~~~igD~~~Di~aa~~aG~~ 185 (220)
T TIGR03351 163 VQSVAVAGDTPNDLEAGINAGAG 185 (220)
T ss_pred hhHeEEeCCCHHHHHHHHHCCCC
Confidence 79999999998755443445554
No 215
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=30.81 E-value=81 Score=35.69 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=64.9
Q ss_pred CeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCc-eEEEEEcCCChhcHHHHHHHhcCCCceee
Q psy17690 121 PYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPL-FEVVIFTSESGLSIAPILEALDKENKYFY 199 (545)
Q Consensus 121 k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~-yEivIfTa~~~~ya~~il~~LDp~~~~i~ 199 (545)
.-++.+..|++++-. -+..-..||++.+.|++|.+ .. +.++|-|+....+|..+++.+.- ..+|.
T Consensus 364 ~~~~~v~~~~~~~g~-----i~~~d~~~~g~~e~l~~L~~--------~g~i~v~ivTgd~~~~a~~i~~~lgi-~~~f~ 429 (556)
T TIGR01525 364 KTVVFVAVDGELLGV-----IALRDQLRPEAKEAIAALKR--------AGGIKLVMLTGDNRSAAEAVAAELGI-DEVHA 429 (556)
T ss_pred cEEEEEEECCEEEEE-----EEecccchHhHHHHHHHHHH--------cCCCeEEEEeCCCHHHHHHHHHHhCC-Ceeec
Confidence 344556666654432 12335799999999999976 36 99999999999999999999977 34443
Q ss_pred EEEecCccceecCcccccccccCcCCCcEEEEeCCCccccc
Q psy17690 200 FKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 200 ~rl~R~~c~~~~g~~vKdL~~L~Rdl~kvIivDd~~~s~~~ 240 (545)
. + +.......++. ++....+|++|-|...-...
T Consensus 430 ~-~----~p~~K~~~v~~---l~~~~~~v~~vGDg~nD~~a 462 (556)
T TIGR01525 430 E-L----LPEDKLAIVKE---LQEEGGVVAMVGDGINDAPA 462 (556)
T ss_pred c-C----CHHHHHHHHHH---HHHcCCEEEEEECChhHHHH
Confidence 2 1 11111123333 34455699999998866543
No 216
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=30.75 E-value=15 Score=37.89 Aligned_cols=90 Identities=12% Similarity=0.090 Sum_probs=56.5
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhcc--CCCceeeeEeecCcceeE---eCceeeecccccc
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALD--KENKYFYFKLFRDSTEFV---DGHHVKNLDLLNR 379 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LD--p~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgR 379 (545)
+++.++|+.+. +.+.+.|-|++.. .++..+++.+. .....|... ..+.|... ...|.+=+..+|-
T Consensus 147 pGv~elL~~L~~~g~~l~IvTn~~~--------~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~ 217 (286)
T PLN02779 147 PGVLRLMDEALAAGIKVAVCSTSNE--------KAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGV 217 (286)
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCH--------HHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCc
Confidence 45666776654 3688889999877 78888888763 111223332 34443211 1134455677898
Q ss_pred cCCcEEEEeCCCcccccCCCCeeec
Q psy17690 380 DLKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 380 dL~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+.+++|+|+|++.-+..--.+|+..
T Consensus 218 ~p~~~l~IGDs~~Di~aA~~aG~~~ 242 (286)
T PLN02779 218 DPSRCVVVEDSVIGLQAAKAAGMRC 242 (286)
T ss_pred ChHHEEEEeCCHHhHHHHHHcCCEE
Confidence 9999999999998665544555543
No 217
>PHA01732 proline-rich protein
Probab=30.51 E-value=1.3e+02 Score=26.20 Aligned_cols=7 Identities=14% Similarity=0.207 Sum_probs=2.7
Q ss_pred HHHHHHh
Q psy17690 41 KREAQWR 47 (545)
Q Consensus 41 ~~~~~~~ 47 (545)
++..+.|
T Consensus 48 ~~~~skr 54 (94)
T PHA01732 48 REAQSKR 54 (94)
T ss_pred HHHHHHH
Confidence 3333333
No 218
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=30.01 E-value=16 Score=35.20 Aligned_cols=90 Identities=10% Similarity=-0.040 Sum_probs=52.4
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCc--HHHHHhhccCCCceeeeEeecCccee---EeCceeeecccccc
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQS--IAPILEALDKENKYFYFKLFRDSTEF---VDGHHVKNLDLLNR 379 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~Y--Ad~Ild~LDp~~~~~~~rLyR~~C~~---~~g~~vKDLs~LgR 379 (545)
.+..++|+.+.+ .+.+.|.|++.. .. +...+..+.-. .+|++.++.+.+.. ....|.+=++.+|-
T Consensus 97 ~~~~~~L~~L~~~g~~l~i~Sn~~~--------~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~ 167 (211)
T TIGR02247 97 PSMMAAIKTLRAKGFKTACITNNFP--------TDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGV 167 (211)
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCC--------ccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCC
Confidence 355666666653 588888898743 22 21222222222 45777665444321 12245566778898
Q ss_pred cCCcEEEEeCCCcccccCCCCeeec
Q psy17690 380 DLKKVIAVDWNTHSLSKNRENALII 404 (545)
Q Consensus 380 dL~~vIiIDn~p~s~~~qp~NgI~I 404 (545)
+.+++|+|||++.....--..|+..
T Consensus 168 ~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 168 APEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 9999999999987554433445543
No 219
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=29.58 E-value=1.1e+02 Score=30.13 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhhhhHHHhhhcccceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEe
Q psy17690 293 EAFNQNQIKLRSIAPILEALDKENKYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKL 358 (545)
Q Consensus 293 ~~fre~Q~kLqeQ~e~~EfL~klsk~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rL 358 (545)
+.+.+..++.+-..++.++++.+.+.+.+.|-|++.. .+++++++.+.-+ .+|..++
T Consensus 58 ~~i~~~~~~i~l~pga~ell~~lk~~~~~~IVS~~~~--------~~~~~il~~lgi~-~~~an~l 114 (203)
T TIGR02137 58 GDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFY--------EFSQPLMRQLGFP-TLLCHKL 114 (203)
T ss_pred HHHHHHHHhCCCCccHHHHHHHHHhCCeEEEEeCChH--------HHHHHHHHHcCCc-hhhceee
Confidence 3343333333445677788887766678899999988 8999999998866 4555443
No 220
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=29.27 E-value=1.2e+02 Score=29.73 Aligned_cols=49 Identities=8% Similarity=0.112 Sum_probs=37.6
Q ss_pred eeCCChhHHHH-hhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHH---hcCCCceeeEEEe
Q psy17690 146 KKRPFVDDFFE-TLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEA---LDKENKYFYFKLF 203 (545)
Q Consensus 146 ~kRPgld~FL~-~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~---LDp~~~~i~~rl~ 203 (545)
..+|++.+.|+ ++.+ ..+.|+|-|++...+++++++. ++- ...|.-++-
T Consensus 94 ~l~pga~e~L~~~l~~--------~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLES--------SDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIE 146 (210)
T ss_pred CCCccHHHHHHHHHHh--------CCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeE
Confidence 46899999995 7773 3799999999999999999977 343 344544443
No 221
>PRK11587 putative phosphatase; Provisional
Probab=29.13 E-value=38 Score=32.91 Aligned_cols=88 Identities=7% Similarity=-0.053 Sum_probs=56.2
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeE---eCceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFV---DGHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~---~g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. +.+.+.|-|++.. .++..+++...-. .+...+..+++... ...|.+-+..+|-..
T Consensus 86 pg~~e~L~~L~~~g~~~~ivTn~~~--------~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p 155 (218)
T PRK11587 86 PGAIALLNHLNKLGIPWAIVTSGSV--------PVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAP 155 (218)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCCCc--------hHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc
Confidence 46677777764 4588888898865 4555555544432 34555555544321 124566677889999
Q ss_pred CcEEEEeCCCcccccCCCCeee
Q psy17690 382 KKVIAVDWNTHSLSKNRENALI 403 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI~ 403 (545)
+++|+|+|++.-...--..|+.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~ 177 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCH 177 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCE
Confidence 9999999999765544455554
No 222
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=28.91 E-value=60 Score=38.03 Aligned_cols=63 Identities=19% Similarity=0.194 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHh
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEAL 191 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~L 191 (545)
.++..|++|+||||+-....... ...-|.+.+-|+.|++ + +...|+|-|.-+......++..+
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~---~~~~~~~~~~L~~L~~---d----~g~~V~ivSGR~~~~l~~~~~~~ 552 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPEL---AVPDKELRDLLRRLAA---D----PNTDVAIISGRDRDTLERWFGDL 552 (726)
T ss_pred ccceEEEEecCccccCCCCCccc---CCCCHHHHHHHHHHHc---C----CCCeEEEEeCCCHHHHHHHhCCC
Confidence 35678999999999964222111 1334677788888885 1 24678888888877666655443
No 223
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=28.11 E-value=1.1e+02 Score=26.37 Aligned_cols=15 Identities=33% Similarity=0.262 Sum_probs=13.4
Q ss_pred CeEEEEeCCCeeEee
Q psy17690 121 PYTLLLEFRDLLVHP 135 (545)
Q Consensus 121 k~tLVLDLDeTLvhs 135 (545)
..+|||+-|||.|.+
T Consensus 39 ~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 39 VLTLVLEEDGTAVDS 53 (81)
T ss_pred ceEEEEecCCCEEcc
Confidence 369999999999987
No 224
>PLN02580 trehalose-phosphatase
Probab=27.71 E-value=68 Score=35.03 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=43.9
Q ss_pred CCCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHH
Q psy17690 119 QPPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILE 189 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~ 189 (545)
.++..|+||.||||+--. .+.-.+..=|.+.+-|+.|++ .+-++|-|--...-++..+.
T Consensus 117 ~k~~~LfLDyDGTLaPIv---~~Pd~A~~s~~~~~aL~~La~---------~~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 117 GKKIALFLDYDGTLSPIV---DDPDRALMSDAMRSAVKNVAK---------YFPTAIISGRSRDKVYELVG 175 (384)
T ss_pred cCCeEEEEecCCccCCCC---CCcccccCCHHHHHHHHHHhh---------CCCEEEEeCCCHHHHHHHhC
Confidence 357789999999997321 122235667899999999997 67899999888766666554
No 225
>PRK11590 hypothetical protein; Provisional
Probab=27.58 E-value=1.4e+02 Score=28.93 Aligned_cols=49 Identities=10% Similarity=0.033 Sum_probs=37.7
Q ss_pred eeCCChhHHH-HhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC--CCceeeEEE
Q psy17690 146 KKRPFVDDFF-ETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK--ENKYFYFKL 202 (545)
Q Consensus 146 ~kRPgld~FL-~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp--~~~~i~~rl 202 (545)
..+||+.+.| +++.+ ..+.++|-|++...++.+++..+.- ....|.-++
T Consensus 95 ~~~pga~e~L~~~l~~--------~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLS--------SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQM 146 (211)
T ss_pred cCCccHHHHHHHHHHh--------CCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEE
Confidence 4589999999 56764 2799999999999999999998651 134555554
No 226
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=27.40 E-value=1.1e+02 Score=26.10 Aligned_cols=15 Identities=33% Similarity=0.286 Sum_probs=13.5
Q ss_pred CeEEEEeCCCeeEee
Q psy17690 121 PYTLLLEFRDLLVHP 135 (545)
Q Consensus 121 k~tLVLDLDeTLvhs 135 (545)
..+|||+-|||.|..
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 469999999999987
No 227
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=26.85 E-value=1.1e+02 Score=34.66 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=56.8
Q ss_pred eeeCCChhHHHHhhcCCCCCCCCCCce-EEEEEcCCChhcHHHHHHHhcCCCceeeEEEecCccceecCcccccccccCc
Q psy17690 145 FKKRPFVDDFFETLNGSTTDRNNVPLF-EVVIFTSESGLSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNR 223 (545)
Q Consensus 145 ~~kRPgld~FL~~ls~~~~~~~~~~~y-EivIfTa~~~~ya~~il~~LDp~~~~i~~rl~R~~c~~~~g~~vKdL~~L~R 223 (545)
-..||++.+.+++|.+ ..+ .++|-|+....+|..+++.+.- ..+|.. +.. +. -.+-+..+..
T Consensus 361 d~l~~~~~e~i~~L~~--------~Gi~~v~vvTgd~~~~a~~i~~~lgi-~~~f~~------~~p-~~-K~~~i~~l~~ 423 (536)
T TIGR01512 361 DEPRPDAAEAIAELKA--------LGIEKVVMLTGDRRAVAERVARELGI-DEVHAE------LLP-ED-KLEIVKELRE 423 (536)
T ss_pred ccchHHHHHHHHHHHH--------cCCCcEEEEcCCCHHHHHHHHHHcCC-hhhhhc------cCc-HH-HHHHHHHHHh
Confidence 4789999999999987 468 9999999999999999999876 333321 111 11 1223344456
Q ss_pred CCCcEEEEeCCCccccc
Q psy17690 224 DLKKVIAVDWNTHSLSK 240 (545)
Q Consensus 224 dl~kvIivDd~~~s~~~ 240 (545)
..++|++|-|...-...
T Consensus 424 ~~~~v~~vGDg~nD~~a 440 (536)
T TIGR01512 424 KYGPVAMVGDGINDAPA 440 (536)
T ss_pred cCCEEEEEeCCHHHHHH
Confidence 66899999998765544
No 228
>PF04375 HemX: HemX; InterPro: IPR007470 The majority of proteins in this family are annotated as uroporphyrin-III C-methyltransferase (2.1.1.107 from EC) []; however, there is no direct evidence to support this annotation for these proteins, which come from mainly pathogenic Gram-negative organisms. There is some evidence to suggest that the proteins are membrane anchored as they have a predicted N-terminal signal peptide and transmembrane domain and may be involved in haem transport [].
Probab=26.83 E-value=50 Score=35.65 Aligned_cols=26 Identities=23% Similarity=0.370 Sum_probs=10.6
Q ss_pred hHHHHHHhhcCCCCh-HHHHHHHHHHH
Q psy17690 277 DVREVMLYYSQFDDP-IEAFNQNQIKL 302 (545)
Q Consensus 277 DVR~vL~~y~~~~~~-~~~fre~Q~kL 302 (545)
.+...|+.|.+.+++ ...|.+.-+.|
T Consensus 302 ~A~~wl~~yFd~~~~~~~~~l~~L~~L 328 (372)
T PF04375_consen 302 RAQQWLNRYFDTDSPAVQAFLAELQQL 328 (372)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 334444444444443 33343333333
No 229
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=26.52 E-value=71 Score=30.48 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=23.2
Q ss_pred HHhhhhHHHhhhcccceeEEEEecchhH
Q psy17690 302 LRSIAPILEALDKENKYFYFKLFRDSTE 329 (545)
Q Consensus 302 LqeQ~e~~EfL~klsk~fe~~lfTAs~~ 329 (545)
|-.|+.+++.++++.+.|++.|-||++.
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamd 94 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMD 94 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccC
Confidence 4556677788999999999999999975
No 230
>PLN02382 probable sucrose-phosphatase
Probab=25.93 E-value=37 Score=37.19 Aligned_cols=17 Identities=12% Similarity=0.350 Sum_probs=14.5
Q ss_pred CCCeEEEEeCCCeeEee
Q psy17690 119 QPPYTLLLEFRDLLVHP 135 (545)
Q Consensus 119 ~~k~tLVLDLDeTLvhs 135 (545)
.+++.||.||||||+.+
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 35889999999999965
No 231
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=25.79 E-value=91 Score=31.64 Aligned_cols=53 Identities=11% Similarity=0.179 Sum_probs=35.8
Q ss_pred CCCeeEEEecccccccccccccccccc------------------------ccCCc--HHHHHHHhcCCCCCCCCCCceE
Q psy17690 483 QPPYTLLLEFRDLLVHPEWTYNTGWRF------------------------KKRPF--VDDFFETLNGSTTDRNNVPLFE 536 (545)
Q Consensus 483 ~~~~~l~~~~~~~l~~~~~~~~~~~~~------------------------~krp~--~~~~~~~~~~~~~~~~~~~~~e 536 (545)
+||.++++|||+|||.+.=-.+.||.. ...|+ +..||+++.. .-+.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~--------~G~~ 132 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR--------RGDA 132 (237)
T ss_pred CCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH--------CCCE
Confidence 578899999999999765211234331 23555 8889998863 3477
Q ss_pred EEEEecc
Q psy17690 537 VVIFTSE 543 (545)
Q Consensus 537 ~~~~~~~ 543 (545)
|.|-|+.
T Consensus 133 i~iVTnr 139 (237)
T TIGR01672 133 IFFVTGR 139 (237)
T ss_pred EEEEeCC
Confidence 7777763
No 232
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=25.68 E-value=83 Score=37.52 Aligned_cols=64 Identities=16% Similarity=0.172 Sum_probs=43.4
Q ss_pred CCeEEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHH
Q psy17690 120 PPYTLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEA 190 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~ 190 (545)
++..|+||.||||+...-.......+..-|++-+-|..|++ -+.-.|+|-|.-.....+.++..
T Consensus 506 ~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~-------d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 506 NNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCS-------DPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred cCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHc-------CCCCEEEEEeCCCHHHHHHHhCC
Confidence 46788999999999542222222334566788899999986 12457888888776666666643
No 233
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=25.68 E-value=52 Score=33.77 Aligned_cols=98 Identities=22% Similarity=0.232 Sum_probs=54.4
Q ss_pred eeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhc---CCCceeeEEEec-Ccccee--cCc----
Q psy17690 144 RFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALD---KENKYFYFKLFR-DSTEFV--DGH---- 213 (545)
Q Consensus 144 ~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LD---p~~~~i~~rl~R-~~c~~~--~g~---- 213 (545)
.+..|.|+++|++.|.+ ..--+.|||||...-.+.++++-. ++=+.++..+.= +..... .|.
T Consensus 88 ~i~LRdg~~~~f~~L~~--------~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~ 159 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEE--------HNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHT 159 (246)
T ss_dssp ---B-BTHHHHHHHHHC--------TT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---T
T ss_pred chhhhcCHHHHHHHHHh--------cCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEE
Confidence 57999999999999997 478899999999999999998853 322345444432 222211 121
Q ss_pred cccccccc--------CcCCCcEEEEeCCCccccc-----CCCcccccc
Q psy17690 214 HVKNLDLL--------NRDLKKVIAVDWNTHSLSK-----NRENALIIP 249 (545)
Q Consensus 214 ~vKdL~~L--------~Rdl~kvIivDd~~~s~~~-----qp~N~I~I~ 249 (545)
+-|+-+.| -..-++||++=|+..-..+ +.+|.|.|.
T Consensus 160 ~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIG 208 (246)
T PF05822_consen 160 FNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIG 208 (246)
T ss_dssp T-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEE
T ss_pred eeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEE
Confidence 12332222 2345678888888765543 335555553
No 234
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=25.64 E-value=20 Score=34.70 Aligned_cols=81 Identities=7% Similarity=0.005 Sum_probs=50.7
Q ss_pred ceeEEEEecch-hHHHHhcCCCCcHHHHHhhccCC--C------ceeeeEeecCcceeEeCcee----eecccc---ccc
Q psy17690 317 KYFYFKLFRDS-TEFVEALYPPQSIAPILEALDKE--N------KYFYFKLFRDSTEFVDGHHV----KNLDLL---NRD 380 (545)
Q Consensus 317 k~fe~~lfTAs-~~~~~~ly~~~YAd~Ild~LDp~--~------~~~~~rLyR~~C~~~~g~~v----KDLs~L---gRd 380 (545)
+.+.+.|-|++ .. .++..+++.++-. | .+|+..+.-+... ..... +.+... |-+
T Consensus 60 ~G~~l~I~Sn~~~~--------~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~--~~kp~~~i~~~~~~~~~~gl~ 129 (174)
T TIGR01685 60 AGTYLATASWNDVP--------EWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPN--KAKQLEMILQKVNKVDPSVLK 129 (174)
T ss_pred CCCEEEEEeCCCCh--------HHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCc--hHHHHHHHHHHhhhcccCCCC
Confidence 55777777866 55 6888999988732 2 4577766654321 11111 222222 467
Q ss_pred CCcEEEEeCCCcccccCCCCeeeccCC
Q psy17690 381 LKKVIAVDWNTHSLSKNRENALIIPRW 407 (545)
Q Consensus 381 L~~vIiIDn~p~s~~~qp~NgI~I~~w 407 (545)
.+++|+|||++.....-..+|+.+.-.
T Consensus 130 p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 130 PAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 899999999998776656677665443
No 235
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=24.74 E-value=1.5e+02 Score=27.93 Aligned_cols=43 Identities=12% Similarity=0.075 Sum_probs=30.6
Q ss_pred hHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEe
Q psy17690 307 PILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKL 358 (545)
Q Consensus 307 e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rL 358 (545)
+..++++.+. +.+.+.|.|+|.+ .++.++++.+.-. .+|.-++
T Consensus 91 ~~~~~l~~l~~~g~~v~ivS~s~~--------~~v~~~~~~lg~~-~~~~~~l 134 (202)
T TIGR01490 91 EARDLIRWHKAEGHTIVLVSASLT--------ILVKPLARILGID-NAIGTRL 134 (202)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcH--------HHHHHHHHHcCCc-ceEecce
Confidence 4455555543 4578889999988 8999999988766 4565544
No 236
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=24.05 E-value=1.4e+02 Score=25.56 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.1
Q ss_pred CCeEEEEeCCCeeEee
Q psy17690 120 PPYTLLLEFRDLLVHP 135 (545)
Q Consensus 120 ~k~tLVLDLDeTLvhs 135 (545)
...+|||+-|||.|..
T Consensus 41 ~~~~lvL~eDGT~Vdd 56 (80)
T cd06536 41 APITLVLAEDGTIVED 56 (80)
T ss_pred CceEEEEecCCcEEcc
Confidence 3579999999999987
No 237
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=23.40 E-value=31 Score=33.95 Aligned_cols=53 Identities=11% Similarity=0.057 Sum_probs=33.3
Q ss_pred EEEEeCCCeeEeeccccCcceeeeeCCChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcC
Q psy17690 123 TLLLEFRDLLVHPEWTYNTGWRFKKRPFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDK 193 (545)
Q Consensus 123 tLVLDLDeTLvhs~~~~~~g~~~~kRPgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp 193 (545)
.+++||||||++.+.. + .| +..-++...+ .--++|-|.-+..-+..++..++.
T Consensus 1 li~~DlDgTLl~~~~~----~----~~-~~~~~~~~~~---------gi~~viaTGR~~~~v~~~~~~l~l 53 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG----L----AS-FVELLRGSGD---------AVGFGIATGRSVESAKSRYAKLNL 53 (236)
T ss_pred CeEEeccccccCCHHH----H----HH-HHHHHHhcCC---------CceEEEEeCCCHHHHHHHHHhCCC
Confidence 3789999999985321 1 11 1133332222 456788888887788888887764
No 238
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=23.25 E-value=1.4e+02 Score=25.55 Aligned_cols=15 Identities=20% Similarity=0.082 Sum_probs=13.3
Q ss_pred CeEEEEeCCCeeEee
Q psy17690 121 PYTLLLEFRDLLVHP 135 (545)
Q Consensus 121 k~tLVLDLDeTLvhs 135 (545)
..+|||+-|||.|..
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 369999999999977
No 239
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=23.00 E-value=43 Score=33.00 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=26.1
Q ss_pred hhHHHhhh-ccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhh
Q psy17690 306 APILEALD-KEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEA 346 (545)
Q Consensus 306 ~e~~EfL~-kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~ 346 (545)
+++.|.|+ .+. +...++|-||+.+ .|+.++.+.
T Consensus 97 pga~e~L~~~l~~~G~~v~IvSas~~--------~~~~~ia~~ 131 (210)
T TIGR01545 97 PLVAERLRQYLESSDADIWLITGSPQ--------PLVEAVYFD 131 (210)
T ss_pred ccHHHHHHHHHHhCCCEEEEEcCCcH--------HHHHHHHHh
Confidence 56777774 444 5889999999988 899999866
No 240
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=22.56 E-value=1.5e+02 Score=24.97 Aligned_cols=15 Identities=40% Similarity=0.510 Sum_probs=13.6
Q ss_pred CeEEEEeCCCeeEee
Q psy17690 121 PYTLLLEFRDLLVHP 135 (545)
Q Consensus 121 k~tLVLDLDeTLvhs 135 (545)
..+|||+-|||.|..
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 569999999999987
No 241
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=22.31 E-value=53 Score=40.39 Aligned_cols=89 Identities=11% Similarity=0.087 Sum_probs=63.7
Q ss_pred hhHHHhhhccc-ceeEEEEecchhHHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEe---CceeeecccccccC
Q psy17690 306 APILEALDKEN-KYFYFKLFRDSTEFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVD---GHHVKNLDLLNRDL 381 (545)
Q Consensus 306 ~e~~EfL~kls-k~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~---g~~vKDLs~LgRdL 381 (545)
.++.++|+.+. +.+.+.|.|++.. .+++.+++++.-...+|+..+..+++.... ..|.+=++.+|-+.
T Consensus 164 pG~~elL~~Lk~~G~~l~IvSn~~~--------~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p 235 (1057)
T PLN02919 164 PGALELITQCKNKGLKVAVASSADR--------IKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPT 235 (1057)
T ss_pred ccHHHHHHHHHhCCCeEEEEeCCcH--------HHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCc
Confidence 35566666653 4588889999877 788899988875435789888888776321 24566678889999
Q ss_pred CcEEEEeCCCcccccCCCCee
Q psy17690 382 KKVIAVDWNTHSLSKNRENAL 402 (545)
Q Consensus 382 ~~vIiIDn~p~s~~~qp~NgI 402 (545)
+++|+|+|++.-...--..|+
T Consensus 236 ~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 236 SECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred ccEEEEcCCHHHHHHHHHcCC
Confidence 999999999875443333343
No 242
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=22.15 E-value=69 Score=29.73 Aligned_cols=46 Identities=24% Similarity=0.291 Sum_probs=35.9
Q ss_pred CChhHHHHhhcCCCCCCCCCCceEEEEEcCCChhcHHHHHHHhcCC-CceeeEEE
Q psy17690 149 PFVDDFFETLNGSTTDRNNVPLFEVVIFTSESGLSIAPILEALDKE-NKYFYFKL 202 (545)
Q Consensus 149 Pgld~FL~~ls~~~~~~~~~~~yEivIfTa~~~~ya~~il~~LDp~-~~~i~~rl 202 (545)
|.+.+|++.+.+ ..++++|-|++...+++++++.+.-. ..++..++
T Consensus 92 ~~~~e~i~~~~~--------~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 92 PDAMELIRELKD--------NGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp TTHHHHHHHHHH--------TTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred hhHHHHHHHHHH--------CCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 444499999855 38999999999999999999987642 23666666
No 243
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=21.93 E-value=1.5e+02 Score=28.86 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=27.5
Q ss_pred hhHHHhhhcccc-eeEEEEecchhHHHHhcCCCCcHHHHHhhccCC
Q psy17690 306 APILEALDKENK-YFYFKLFRDSTEFVEALYPPQSIAPILEALDKE 350 (545)
Q Consensus 306 ~e~~EfL~klsk-~fe~~lfTAs~~~~~~ly~~~YAd~Ild~LDp~ 350 (545)
.+..++|+.+.+ .+.+.|.|++.. .|+.++++.+...
T Consensus 73 pg~~e~l~~l~~~g~~~~IvS~~~~--------~~i~~il~~~~~~ 110 (214)
T TIGR03333 73 EGFREFVAFINEHGIPFYVISGGMD--------FFVYPLLEGIVEK 110 (214)
T ss_pred ccHHHHHHHHHHCCCeEEEECCCcH--------HHHHHHHHhhCCc
Confidence 455566666544 588889999987 8999999987543
No 244
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=21.09 E-value=1.7e+02 Score=24.91 Aligned_cols=15 Identities=40% Similarity=0.386 Sum_probs=13.6
Q ss_pred CeEEEEeCCCeeEee
Q psy17690 121 PYTLLLEFRDLLVHP 135 (545)
Q Consensus 121 k~tLVLDLDeTLvhs 135 (545)
..+|||+-|||.|..
T Consensus 40 ~~~lvL~eDGTeVdd 54 (78)
T cd01615 40 PVTLVLEEDGTEVDD 54 (78)
T ss_pred CeEEEEeCCCcEEcc
Confidence 569999999999977
No 245
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=20.74 E-value=48 Score=31.35 Aligned_cols=59 Identities=10% Similarity=0.013 Sum_probs=35.6
Q ss_pred eEEEEecchh-HHHHhcCCCCcHHHHHhhccCCCceeeeEeecCcceeEeCceeeecccccccCCcEEEEeCCCc
Q psy17690 319 FYFKLFRDST-EFVEALYPPQSIAPILEALDKENKYFYFKLFRDSTEFVDGHHVKNLDLLNRDLKKVIAVDWNTH 392 (545)
Q Consensus 319 fe~~lfTAs~-~~~~~ly~~~YAd~Ild~LDp~~~~~~~rLyR~~C~~~~g~~vKDLs~LgRdL~~vIiIDn~p~ 392 (545)
+.+.|.|++. . ..+..+++.++-. . +-..+......+.+=+..+|-+.+++++|+|+..
T Consensus 60 ~~l~I~Sn~~~~--------~~~~~~~~~~gl~-~------~~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~ 119 (170)
T TIGR01668 60 RKLLIVSNNAGE--------QRAKAVEKALGIP-V------LPHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLF 119 (170)
T ss_pred CEEEEEeCCchH--------HHHHHHHHHcCCE-E------EcCCCCCChHHHHHHHHHcCCCHHHEEEECCcch
Confidence 7777888875 4 4556666665532 1 1111222222334446667888999999999983
Done!