Query psy17691
Match_columns 673
No_of_seqs 689 out of 4475
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 20:30:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gyw_A UDP-N-acetylglucosamine 100.0 3.8E-89 1.3E-93 791.2 41.8 521 112-672 4-680 (723)
2 3q3e_A HMW1C-like glycosyltran 100.0 2.2E-55 7.7E-60 485.2 15.0 237 308-672 350-600 (631)
3 2vsy_A XCC0866; transferase, g 100.0 9.9E-46 3.4E-50 420.4 41.4 416 131-670 38-532 (568)
4 1w3b_A UDP-N-acetylglucosamine 99.9 4.5E-25 1.5E-29 236.9 33.0 271 1-286 48-348 (388)
5 1w3b_A UDP-N-acetylglucosamine 99.9 1.5E-24 5E-29 232.9 33.8 272 1-287 14-315 (388)
6 3ieg_A DNAJ homolog subfamily 99.9 2.7E-22 9.2E-27 210.6 35.2 271 1-286 18-349 (359)
7 2y4t_A DNAJ homolog subfamily 99.9 4.1E-22 1.4E-26 217.4 33.3 272 1-287 41-373 (450)
8 3hym_B Cell division cycle pro 99.9 3E-22 1E-26 208.1 29.4 241 1-287 37-314 (330)
9 2pl2_A Hypothetical conserved 99.9 2E-22 6.8E-27 199.3 23.1 158 111-269 33-202 (217)
10 1fch_A Peroxisomal targeting s 99.9 8.2E-22 2.8E-26 208.8 27.3 241 1-269 79-347 (368)
11 4eqf_A PEX5-related protein; a 99.9 5.1E-22 1.8E-26 210.9 23.3 235 1-269 80-344 (365)
12 3cv0_A Peroxisome targeting si 99.9 6.3E-21 2.2E-25 197.8 26.6 239 1-269 36-303 (327)
13 3hym_B Cell division cycle pro 99.9 5.5E-21 1.9E-25 198.6 25.9 225 1-269 71-322 (330)
14 2h6f_A Protein farnesyltransfe 99.9 8.7E-22 3E-26 211.7 19.9 154 112-266 161-323 (382)
15 3ieg_A DNAJ homolog subfamily 99.9 4.7E-20 1.6E-24 193.4 32.2 251 1-266 52-354 (359)
16 2xpi_A Anaphase-promoting comp 99.9 1.8E-20 6.2E-25 212.3 30.2 269 2-286 288-593 (597)
17 2pl2_A Hypothetical conserved 99.9 4.9E-21 1.7E-25 189.2 22.1 173 114-287 2-195 (217)
18 2h6f_A Protein farnesyltransfe 99.9 1.3E-21 4.6E-26 210.2 19.3 177 110-286 124-318 (382)
19 2y4t_A DNAJ homolog subfamily 99.9 1.1E-19 3.8E-24 198.1 31.6 251 1-266 75-377 (450)
20 1fch_A Peroxisomal targeting s 99.9 5.2E-21 1.8E-25 202.6 19.9 178 109-287 124-340 (368)
21 2gw1_A Mitochondrial precursor 99.9 5.1E-21 1.7E-25 211.9 19.6 266 1-269 21-389 (514)
22 2xpi_A Anaphase-promoting comp 99.9 6.1E-20 2.1E-24 207.9 28.2 272 1-287 215-560 (597)
23 3vtx_A MAMA; tetratricopeptide 99.9 4.4E-20 1.5E-24 176.3 22.8 141 112-252 34-175 (184)
24 3fp2_A TPR repeat-containing p 99.9 2.2E-20 7.6E-25 208.3 23.2 266 1-269 40-395 (537)
25 3fp2_A TPR repeat-containing p 99.9 7.8E-20 2.7E-24 203.9 27.1 270 1-286 74-471 (537)
26 2gw1_A Mitochondrial precursor 99.8 7.7E-20 2.6E-24 202.4 25.9 173 112-284 299-490 (514)
27 4eqf_A PEX5-related protein; a 99.8 1.8E-20 6.1E-25 199.0 19.1 215 40-269 66-298 (365)
28 3uq3_A Heat shock protein STI1 99.8 9.1E-20 3.1E-24 182.3 22.9 229 1-261 20-256 (258)
29 3vtx_A MAMA; tetratricopeptide 99.8 9.8E-20 3.3E-24 173.9 21.7 161 116-276 4-174 (184)
30 2q7f_A YRRB protein; TPR, prot 99.8 1E-19 3.4E-24 180.7 22.2 142 124-265 99-240 (243)
31 3u4t_A TPR repeat-containing p 99.8 4.9E-20 1.7E-24 186.6 20.0 223 1-284 18-262 (272)
32 4g1t_A Interferon-induced prot 99.8 1.7E-19 5.9E-24 198.2 24.6 256 1-268 66-388 (472)
33 3mkr_A Coatomer subunit epsilo 99.8 3.2E-19 1.1E-23 184.7 24.7 230 1-281 14-273 (291)
34 4abn_A Tetratricopeptide repea 99.8 7.6E-20 2.6E-24 202.7 20.8 204 2-269 84-309 (474)
35 2q7f_A YRRB protein; TPR, prot 99.8 1.1E-18 3.9E-23 173.0 24.7 176 112-287 52-237 (243)
36 4i17_A Hypothetical protein; T 99.8 4.7E-19 1.6E-23 175.4 20.6 185 16-263 3-225 (228)
37 4gyw_A UDP-N-acetylglucosamine 99.8 1.8E-19 6.1E-24 208.5 19.3 139 111-249 37-176 (723)
38 2ho1_A Type 4 fimbrial biogene 99.8 2.2E-18 7.5E-23 172.5 24.4 205 14-281 30-247 (252)
39 2vq2_A PILW, putative fimbrial 99.8 3.8E-18 1.3E-22 166.7 25.2 170 113-282 38-221 (225)
40 4ga2_A E3 SUMO-protein ligase 99.8 8E-20 2.7E-24 169.6 10.7 140 128-267 9-149 (150)
41 4i17_A Hypothetical protein; T 99.8 1.5E-18 5.2E-23 171.7 20.3 153 116-268 6-169 (228)
42 2ond_A Cleavage stimulation fa 99.8 8.7E-18 3E-22 175.0 25.4 212 3-269 33-258 (308)
43 3uq3_A Heat shock protein STI1 99.8 5.7E-18 1.9E-22 169.1 22.0 159 126-284 48-254 (258)
44 4gco_A Protein STI-1; structur 99.8 1.7E-18 5.9E-23 155.7 15.3 122 141-262 4-125 (126)
45 3cv0_A Peroxisome targeting si 99.8 9E-18 3.1E-22 174.0 22.2 178 110-287 82-296 (327)
46 4g1t_A Interferon-induced prot 99.8 1.9E-18 6.3E-23 189.9 17.7 258 2-284 154-471 (472)
47 2pzi_A Probable serine/threoni 99.8 1.5E-18 5E-23 201.0 15.8 138 129-267 446-583 (681)
48 4abn_A Tetratricopeptide repea 99.8 8E-18 2.8E-22 186.4 19.5 176 111-287 96-302 (474)
49 3mkr_A Coatomer subunit epsilo 99.7 2.1E-16 7.2E-21 163.4 25.9 143 114-256 127-273 (291)
50 3u4t_A TPR repeat-containing p 99.7 2.4E-17 8.3E-22 166.7 18.1 202 1-266 52-269 (272)
51 2pzi_A Probable serine/threoni 99.7 1.1E-17 3.9E-22 193.5 17.3 173 112-287 389-578 (681)
52 3sf4_A G-protein-signaling mod 99.7 3.7E-18 1.3E-22 182.5 12.2 268 1-269 24-364 (406)
53 3qky_A Outer membrane assembly 99.7 3.7E-17 1.3E-21 165.4 18.7 195 12-269 7-249 (261)
54 2vq2_A PILW, putative fimbrial 99.7 1.5E-16 5.1E-21 155.3 21.7 174 113-286 4-191 (225)
55 4ga2_A E3 SUMO-protein ligase 99.7 1.2E-17 4E-22 155.0 13.0 109 125-233 40-149 (150)
56 3urz_A Uncharacterized protein 99.7 2.5E-17 8.4E-22 161.4 15.3 138 122-261 60-199 (208)
57 3as5_A MAMA; tetratricopeptide 99.7 1.5E-16 5.3E-21 149.8 20.2 141 113-253 38-179 (186)
58 1xnf_A Lipoprotein NLPI; TPR, 99.7 6.6E-17 2.2E-21 163.4 18.0 213 1-278 20-250 (275)
59 2ho1_A Type 4 fimbrial biogene 99.7 2.3E-16 7.7E-21 157.7 20.8 175 112-286 31-218 (252)
60 1ouv_A Conserved hypothetical 99.7 1.4E-15 4.9E-20 154.5 27.0 145 117-269 74-239 (273)
61 3gyz_A Chaperone protein IPGC; 99.7 1.6E-17 5.6E-22 154.3 11.0 121 132-252 18-138 (151)
62 1ouv_A Conserved hypothetical 99.7 2.7E-15 9.3E-20 152.5 28.5 143 102-250 95-254 (273)
63 3as5_A MAMA; tetratricopeptide 99.7 2.6E-16 8.7E-21 148.3 18.3 149 121-269 13-161 (186)
64 3qky_A Outer membrane assembly 99.7 2.4E-16 8.1E-21 159.5 18.8 169 112-280 10-232 (261)
65 4gco_A Protein STI-1; structur 99.7 2.6E-16 9.1E-21 141.3 15.8 117 112-228 8-125 (126)
66 4a1s_A PINS, partner of inscut 99.7 4.9E-17 1.7E-21 175.0 13.0 251 1-269 63-360 (411)
67 3urz_A Uncharacterized protein 99.7 2.5E-16 8.5E-21 154.2 15.3 158 119-277 7-191 (208)
68 3ro2_A PINS homolog, G-protein 99.7 1.5E-16 5.3E-21 164.3 14.3 248 1-269 20-320 (338)
69 2xm6_A Protein corresponding t 99.7 1.7E-14 5.7E-19 160.1 30.4 245 1-266 58-342 (490)
70 2vgx_A Chaperone SYCD; alterna 99.7 1.9E-16 6.3E-21 146.5 11.9 123 136-258 7-129 (148)
71 1qqe_A Vesicular transport pro 99.7 5.1E-16 1.8E-20 160.3 16.2 145 118-262 78-248 (292)
72 1xnf_A Lipoprotein NLPI; TPR, 99.7 1.2E-15 4.1E-20 154.0 17.8 201 1-269 58-263 (275)
73 2vsy_A XCC0866; transferase, g 99.7 5.3E-16 1.8E-20 175.5 16.7 156 129-284 2-169 (568)
74 2ond_A Cleavage stimulation fa 99.7 4.3E-15 1.5E-19 154.5 21.8 216 2-284 80-304 (308)
75 3qou_A Protein YBBN; thioredox 99.7 1.7E-15 5.9E-20 156.1 18.6 168 102-269 102-272 (287)
76 2xm6_A Protein corresponding t 99.7 3.6E-14 1.2E-18 157.4 30.1 262 6-288 27-339 (490)
77 3dra_A Protein farnesyltransfe 99.6 1.6E-14 5.4E-19 149.7 24.1 206 3-269 50-275 (306)
78 2r5s_A Uncharacterized protein 99.6 1.1E-15 3.8E-20 145.2 14.0 150 119-269 9-161 (176)
79 2yhc_A BAMD, UPF0169 lipoprote 99.6 6.9E-15 2.4E-19 145.6 19.9 132 121-252 46-218 (225)
80 2xcb_A PCRH, regulatory protei 99.6 8.4E-16 2.9E-20 140.6 11.7 125 137-261 5-129 (142)
81 1qqe_A Vesicular transport pro 99.6 1.9E-15 6.4E-20 156.1 14.9 144 119-262 119-284 (292)
82 3upv_A Heat shock protein STI1 99.6 5.8E-15 2E-19 131.5 16.1 119 147-265 1-125 (126)
83 3nf1_A KLC 1, kinesin light ch 99.6 1.8E-15 6.2E-20 155.3 14.7 195 1-250 42-310 (311)
84 2r5s_A Uncharacterized protein 99.6 1.1E-15 3.8E-20 145.2 12.0 133 113-246 36-172 (176)
85 2yhc_A BAMD, UPF0169 lipoprote 99.6 6.6E-15 2.3E-19 145.7 17.8 150 120-269 8-201 (225)
86 3edt_B KLC 2, kinesin light ch 99.6 2E-15 7E-20 152.3 14.1 192 2-248 17-282 (283)
87 3gyz_A Chaperone protein IPGC; 99.6 2.1E-15 7.2E-20 140.0 12.9 107 112-218 31-138 (151)
88 1p5q_A FKBP52, FK506-binding p 99.6 1.3E-15 4.5E-20 160.8 11.8 135 113-247 143-294 (336)
89 2fo7_A Synthetic consensus TPR 99.6 4E-14 1.4E-18 125.4 19.7 131 121-251 6-136 (136)
90 1p5q_A FKBP52, FK506-binding p 99.6 4.3E-16 1.5E-20 164.5 7.9 141 129-269 126-281 (336)
91 3qou_A Protein YBBN; thioredox 99.6 5.3E-15 1.8E-19 152.5 15.6 170 14-246 111-283 (287)
92 2e2e_A Formate-dependent nitri 99.6 6.7E-15 2.3E-19 139.4 14.6 131 128-258 22-155 (177)
93 3ulq_A Response regulator aspa 99.6 3.5E-15 1.2E-19 159.7 13.9 212 1-269 118-356 (383)
94 3e4b_A ALGK; tetratricopeptide 99.6 1.7E-14 5.8E-19 158.6 19.6 137 119-264 178-330 (452)
95 2vyi_A SGTA protein; chaperone 99.6 2.3E-14 7.8E-19 126.7 16.3 124 146-269 8-131 (131)
96 1dce_A Protein (RAB geranylger 99.6 2.2E-14 7.7E-19 161.7 19.8 139 131-269 88-243 (567)
97 3nf1_A KLC 1, kinesin light ch 99.6 5.6E-15 1.9E-19 151.6 13.7 130 118-247 70-224 (311)
98 2ooe_A Cleavage stimulation fa 99.6 9.2E-14 3.1E-18 155.7 24.2 152 133-284 255-432 (530)
99 2lni_A Stress-induced-phosphop 99.6 1.9E-14 6.6E-19 128.0 15.0 122 146-267 12-133 (133)
100 3sz7_A HSC70 cochaperone (SGT) 99.6 1.7E-14 5.8E-19 135.0 15.2 117 146-262 7-123 (164)
101 2ooe_A Cleavage stimulation fa 99.6 1E-13 3.5E-18 155.3 24.2 209 3-269 255-480 (530)
102 1hh8_A P67PHOX, NCF-2, neutrop 99.6 5.4E-14 1.8E-18 136.8 18.7 141 120-263 10-166 (213)
103 3e4b_A ALGK; tetratricopeptide 99.6 5E-14 1.7E-18 154.9 20.3 239 2-264 90-366 (452)
104 3dss_A Geranylgeranyl transfer 99.6 3.3E-13 1.1E-17 140.7 25.3 207 3-262 47-282 (331)
105 3rjv_A Putative SEL1 repeat pr 99.6 9E-14 3.1E-18 136.4 19.9 187 3-261 3-209 (212)
106 2vgx_A Chaperone SYCD; alterna 99.6 1.1E-14 3.8E-19 134.5 12.5 112 111-222 15-127 (148)
107 4a1s_A PINS, partner of inscut 99.6 5.7E-15 2E-19 158.8 11.6 233 1-252 101-377 (411)
108 4f3v_A ESX-1 secretion system 99.6 3.9E-14 1.3E-18 143.8 16.5 223 1-259 21-248 (282)
109 3sf4_A G-protein-signaling mod 99.6 1.7E-14 5.8E-19 153.9 14.4 244 18-269 7-324 (406)
110 4gcn_A Protein STI-1; structur 99.6 6.5E-14 2.2E-18 125.7 15.7 111 149-260 7-124 (127)
111 1na0_A Designed protein CTPR3; 99.6 2.1E-13 7.1E-18 119.3 18.7 121 146-266 4-125 (125)
112 2xcb_A PCRH, regulatory protei 99.6 1.3E-14 4.4E-19 132.6 11.1 119 112-230 13-132 (142)
113 3q7a_A Farnesyltransferase alp 99.5 2.3E-13 7.9E-18 142.5 21.4 138 131-268 104-258 (349)
114 3ro2_A PINS homolog, G-protein 99.5 2E-14 6.9E-19 148.3 12.2 240 1-251 58-336 (338)
115 1a17_A Serine/threonine protei 99.5 3E-13 1E-17 125.4 19.0 127 121-247 18-146 (166)
116 2fbn_A 70 kDa peptidylprolyl i 99.5 1.3E-14 4.6E-19 140.2 10.1 142 128-269 16-173 (198)
117 2hr2_A Hypothetical protein; a 99.5 2.1E-14 7.3E-19 132.7 10.6 111 150-260 11-144 (159)
118 3q49_B STIP1 homology and U bo 99.5 1.8E-13 6.1E-18 123.1 16.1 121 144-264 3-128 (137)
119 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 3.5E-15 1.2E-19 164.4 5.7 141 129-269 247-402 (457)
120 3upv_A Heat shock protein STI1 99.5 2.2E-13 7.4E-18 121.2 16.0 111 121-231 9-125 (126)
121 1elw_A TPR1-domain of HOP; HOP 99.5 4.5E-13 1.5E-17 116.0 17.4 114 149-262 3-116 (118)
122 3edt_B KLC 2, kinesin light ch 99.5 1.1E-13 3.7E-18 139.5 14.9 153 116-268 42-228 (283)
123 3q15_A PSP28, response regulat 99.5 8.5E-14 2.9E-18 148.8 14.8 212 1-269 116-353 (378)
124 1hxi_A PEX5, peroxisome target 99.5 1.1E-13 3.7E-18 123.2 12.9 100 153-252 20-119 (121)
125 3dra_A Protein farnesyltransfe 99.5 5.5E-13 1.9E-17 138.1 19.9 162 123-284 39-227 (306)
126 3rkv_A Putative peptidylprolyl 99.5 1.2E-13 4.1E-18 128.9 13.5 117 150-266 11-146 (162)
127 2dba_A Smooth muscle cell asso 99.5 4.6E-13 1.6E-17 121.5 16.0 120 145-264 23-145 (148)
128 3ulq_A Response regulator aspa 99.5 1.2E-13 4.1E-18 147.8 13.6 151 118-268 144-319 (383)
129 2fo7_A Synthetic consensus TPR 99.5 8.4E-13 2.9E-17 116.8 16.4 119 151-269 2-120 (136)
130 2e2e_A Formate-dependent nitri 99.5 3.6E-13 1.2E-17 127.3 14.7 94 129-222 57-153 (177)
131 2ifu_A Gamma-SNAP; membrane fu 99.5 6.5E-13 2.2E-17 138.0 17.7 202 1-252 6-228 (307)
132 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 4.1E-14 1.4E-18 155.8 8.7 132 114-245 265-413 (457)
133 1a17_A Serine/threonine protei 99.5 8.7E-13 3E-17 122.2 16.4 120 150-269 13-134 (166)
134 2lni_A Stress-induced-phosphop 99.5 6.3E-13 2.1E-17 118.1 14.6 120 114-233 13-133 (133)
135 3sz7_A HSC70 cochaperone (SGT) 99.5 6.3E-13 2.2E-17 124.2 15.1 114 116-229 10-124 (164)
136 2vyi_A SGTA protein; chaperone 99.5 1.5E-12 5.1E-17 114.8 16.8 119 116-234 11-130 (131)
137 2xev_A YBGF; tetratricopeptide 99.4 1.9E-12 6.6E-17 114.9 16.1 116 151-266 3-124 (129)
138 3rjv_A Putative SEL1 repeat pr 99.4 9.8E-13 3.4E-17 129.0 15.5 156 104-265 5-175 (212)
139 1elr_A TPR2A-domain of HOP; HO 99.4 1E-12 3.5E-17 116.1 13.8 118 148-266 2-126 (131)
140 3dss_A Geranylgeranyl transfer 99.4 6.2E-12 2.1E-16 131.1 21.9 164 102-265 47-240 (331)
141 3q7a_A Farnesyltransferase alp 99.4 1.8E-12 6.2E-17 135.7 17.3 171 114-284 51-249 (349)
142 2kck_A TPR repeat; tetratricop 99.4 5.1E-13 1.7E-17 114.7 11.0 106 146-251 2-110 (112)
143 2c2l_A CHIP, carboxy terminus 99.4 5.4E-13 1.8E-17 136.9 13.1 166 115-283 2-175 (281)
144 2qfc_A PLCR protein; TPR, HTH, 99.4 5.1E-12 1.7E-16 130.1 20.2 149 121-269 80-253 (293)
145 1na0_A Designed protein CTPR3; 99.4 7.3E-12 2.5E-16 109.3 18.2 116 117-232 9-125 (125)
146 2fbn_A 70 kDa peptidylprolyl i 99.4 1.8E-12 6.2E-17 125.1 15.6 125 121-245 43-184 (198)
147 2qfc_A PLCR protein; TPR, HTH, 99.4 4.6E-12 1.6E-16 130.4 19.5 124 125-248 124-267 (293)
148 1zu2_A Mitochondrial import re 99.4 3.9E-13 1.3E-17 124.0 10.1 70 129-198 15-94 (158)
149 2bfw_A GLGA glycogen synthase; 99.4 7.9E-13 2.7E-17 128.0 12.9 155 464-671 26-192 (200)
150 1dce_A Protein (RAB geranylger 99.4 1.4E-12 4.8E-17 147.1 16.6 162 127-288 39-237 (567)
151 1hxi_A PEX5, peroxisome target 99.4 1.1E-12 3.9E-17 116.4 12.6 101 119-219 20-120 (121)
152 3u3w_A Transcriptional activat 99.4 1.9E-12 6.4E-17 133.4 15.7 122 126-247 125-266 (293)
153 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.6E-12 9E-17 124.7 15.7 124 151-277 7-155 (213)
154 2hr2_A Hypothetical protein; a 99.4 6.2E-13 2.1E-17 122.9 10.3 108 120-227 15-145 (159)
155 3q49_B STIP1 homology and U bo 99.4 3E-12 1E-16 114.9 14.7 121 113-233 5-131 (137)
156 1zu2_A Mitochondrial import re 99.4 7.4E-13 2.5E-17 122.1 10.6 101 161-261 13-134 (158)
157 4gcn_A Protein STI-1; structur 99.4 3.4E-12 1.2E-16 114.3 14.8 104 121-225 13-123 (127)
158 2ifu_A Gamma-SNAP; membrane fu 99.4 1.2E-12 4.3E-17 135.8 13.2 145 124-269 44-212 (307)
159 3rkv_A Putative peptidylprolyl 99.4 1.8E-12 6E-17 120.9 12.9 115 121-235 16-149 (162)
160 1wao_1 Serine/threonine protei 99.4 3.6E-13 1.2E-17 149.0 9.4 126 126-251 16-154 (477)
161 1elw_A TPR1-domain of HOP; HOP 99.4 1E-11 3.4E-16 107.4 16.6 109 121-229 9-117 (118)
162 1hz4_A MALT regulatory protein 99.4 2E-11 7E-16 129.5 22.1 212 1-269 29-270 (373)
163 3q15_A PSP28, response regulat 99.4 3.4E-12 1.2E-16 136.3 15.7 147 121-267 146-315 (378)
164 3k9i_A BH0479 protein; putativ 99.4 1.3E-12 4.4E-17 114.9 9.2 91 130-220 4-97 (117)
165 3u3w_A Transcriptional activat 99.4 7.2E-12 2.4E-16 129.0 15.2 146 123-268 82-252 (293)
166 1ihg_A Cyclophilin 40; ppiase 99.3 3.6E-12 1.2E-16 136.2 13.1 119 150-268 223-357 (370)
167 3k9i_A BH0479 protein; putativ 99.3 1.1E-12 3.8E-17 115.4 7.6 107 162-268 2-111 (117)
168 2xev_A YBGF; tetratricopeptide 99.3 3.2E-11 1.1E-15 106.9 17.3 114 120-233 6-125 (129)
169 2dba_A Smooth muscle cell asso 99.3 1.7E-11 5.6E-16 111.1 15.7 118 113-230 24-145 (148)
170 1xi4_A Clathrin heavy chain; a 99.3 7.1E-11 2.4E-15 140.0 24.6 214 17-265 1102-1327(1630)
171 2if4_A ATFKBP42; FKBP-like, al 99.3 8.6E-13 2.9E-17 139.2 7.7 132 122-253 185-334 (338)
172 3gw4_A Uncharacterized protein 99.3 1.1E-11 3.9E-16 118.8 14.0 133 117-249 26-178 (203)
173 2if4_A ATFKBP42; FKBP-like, al 99.3 1.1E-12 3.6E-17 138.5 6.2 120 146-265 175-311 (338)
174 1b89_A Protein (clathrin heavy 99.3 5.2E-12 1.8E-16 135.4 11.2 223 2-265 19-254 (449)
175 1wao_1 Serine/threonine protei 99.3 1.2E-12 4.1E-17 144.8 6.2 120 150-269 6-127 (477)
176 2c2l_A CHIP, carboxy terminus 99.3 1.3E-11 4.5E-16 126.6 13.4 105 147-251 1-105 (281)
177 1ihg_A Cyclophilin 40; ppiase 99.3 1.7E-11 5.9E-16 130.9 14.8 120 121-240 228-363 (370)
178 3c48_A Predicted glycosyltrans 99.3 1.4E-11 4.9E-16 134.1 14.4 162 465-670 233-401 (438)
179 1xi4_A Clathrin heavy chain; a 99.3 2.4E-10 8.4E-15 135.5 25.4 249 2-287 1001-1324(1630)
180 3okp_A GDP-mannose-dependent a 99.3 8.6E-12 2.9E-16 133.5 11.9 157 463-670 186-354 (394)
181 2kck_A TPR repeat; tetratricop 99.3 2.6E-11 8.9E-16 103.8 12.4 105 113-217 2-110 (112)
182 1elr_A TPR2A-domain of HOP; HO 99.3 3E-11 1E-15 106.5 12.9 111 121-232 9-126 (131)
183 2x6q_A Trehalose-synthase TRET 99.3 1E-11 3.5E-16 134.4 11.8 164 464-670 220-389 (416)
184 3oy2_A Glycosyltransferase B73 99.3 1.5E-11 5E-16 133.0 12.7 165 464-670 171-365 (413)
185 1hz4_A MALT regulatory protein 99.3 8.7E-11 3E-15 124.6 18.3 214 1-269 68-310 (373)
186 3gw4_A Uncharacterized protein 99.3 1.4E-11 4.8E-16 118.2 11.0 143 127-269 3-164 (203)
187 3ro3_A PINS homolog, G-protein 99.3 2.8E-11 9.7E-16 110.5 12.5 130 121-250 14-161 (164)
188 2f9f_A First mannosyl transfer 99.2 1.2E-11 4.3E-16 117.5 8.4 152 469-672 17-175 (177)
189 4f3v_A ESX-1 secretion system 99.2 3.6E-12 1.2E-16 129.3 4.2 180 102-283 23-247 (282)
190 3fro_A GLGA glycogen synthase; 99.2 4.7E-11 1.6E-15 129.6 11.3 180 437-670 216-406 (439)
191 2jjm_A Glycosyl transferase, g 99.2 3.3E-11 1.1E-15 129.4 9.9 156 464-670 200-360 (394)
192 2kat_A Uncharacterized protein 99.2 1.7E-10 5.9E-15 100.6 11.6 81 135-215 4-84 (115)
193 2iw1_A Lipopolysaccharide core 99.2 4.9E-11 1.7E-15 126.7 9.6 157 464-671 185-348 (374)
194 3mv2_B Coatomer subunit epsilo 99.2 6E-10 2E-14 114.5 17.2 159 120-281 104-291 (310)
195 3qhp_A Type 1 capsular polysac 99.2 1.1E-10 3.8E-15 109.2 10.8 144 476-671 3-151 (166)
196 2kat_A Uncharacterized protein 99.2 2.8E-10 9.6E-15 99.2 12.6 101 167-267 2-104 (115)
197 2l6j_A TPR repeat-containing p 99.1 3E-11 1E-15 104.0 5.1 86 184-269 4-95 (111)
198 1na3_A Designed protein CTPR2; 99.1 4.7E-10 1.6E-14 92.6 12.1 82 184-265 9-90 (91)
199 2gek_A Phosphatidylinositol ma 99.1 1.6E-10 5.6E-15 124.0 11.8 150 470-670 203-359 (406)
200 1na3_A Designed protein CTPR2; 99.1 5.7E-10 1.9E-14 92.1 12.0 85 148-232 7-91 (91)
201 2l6j_A TPR repeat-containing p 99.1 5E-10 1.7E-14 96.1 11.2 95 149-243 3-103 (111)
202 2r60_A Glycosyl transferase, g 99.1 1.9E-10 6.6E-15 127.6 10.6 171 464-670 246-434 (499)
203 1klx_A Cysteine rich protein B 99.1 2E-09 6.7E-14 97.8 15.0 120 131-260 10-137 (138)
204 3ro3_A PINS homolog, G-protein 99.1 5.1E-10 1.8E-14 102.0 10.2 120 150-269 9-146 (164)
205 1b89_A Protein (clathrin heavy 99.0 3.7E-10 1.3E-14 121.1 10.0 232 1-269 47-299 (449)
206 4b4t_Q 26S proteasome regulato 99.0 3.5E-09 1.2E-13 114.2 17.3 119 129-247 108-245 (434)
207 3ma5_A Tetratricopeptide repea 99.0 2E-09 6.9E-14 91.6 11.0 87 180-266 3-91 (100)
208 3n71_A Histone lysine methyltr 99.0 1.5E-09 5.1E-14 119.7 12.1 123 126-248 319-465 (490)
209 3s28_A Sucrose synthase 1; gly 99.0 1.3E-09 4.4E-14 126.5 12.1 171 464-671 559-745 (816)
210 2kc7_A BFR218_protein; tetratr 99.0 8.5E-10 2.9E-14 93.1 7.8 90 154-251 4-94 (99)
211 3ma5_A Tetratricopeptide repea 99.0 3.2E-09 1.1E-13 90.4 10.3 87 145-231 2-90 (100)
212 3mv2_B Coatomer subunit epsilo 98.9 1.2E-08 4.2E-13 104.7 16.1 184 5-256 85-291 (310)
213 2qzs_A Glycogen synthase; glyc 98.9 4.1E-09 1.4E-13 116.4 13.3 156 464-670 279-454 (485)
214 4e6h_A MRNA 3'-END-processing 98.9 5.1E-08 1.7E-12 111.6 22.7 202 5-269 328-558 (679)
215 1rzu_A Glycogen synthase 1; gl 98.9 4.7E-09 1.6E-13 115.9 13.5 157 464-671 279-454 (485)
216 2kc7_A BFR218_protein; tetratr 98.9 5E-09 1.7E-13 88.3 7.9 89 121-217 5-94 (99)
217 1vgv_A UDP-N-acetylglucosamine 98.8 1.8E-08 6.3E-13 107.3 13.2 152 465-671 194-353 (384)
218 4b4t_Q 26S proteasome regulato 98.8 3.3E-08 1.1E-12 106.5 14.6 150 120-269 8-192 (434)
219 2iuy_A Avigt4, glycosyltransfe 98.8 2.6E-08 9E-13 104.4 13.4 128 478-659 165-307 (342)
220 3ly7_A Transcriptional activat 98.8 8.1E-08 2.8E-12 100.4 16.8 140 113-253 190-345 (372)
221 1klx_A Cysteine rich protein B 98.8 1.6E-07 5.5E-12 85.0 15.4 92 129-226 38-137 (138)
222 3n71_A Histone lysine methyltr 98.7 2E-08 6.8E-13 110.7 9.4 115 155-269 314-452 (490)
223 3beo_A UDP-N-acetylglucosamine 98.7 6.3E-08 2.2E-12 102.7 12.9 144 472-671 203-353 (375)
224 3vue_A GBSS-I, granule-bound s 98.7 4E-08 1.4E-12 109.8 9.7 142 437-622 277-433 (536)
225 2x0d_A WSAF; GT4 family, trans 98.7 2.2E-08 7.4E-13 108.4 7.0 128 483-666 252-385 (413)
226 1f0k_A MURG, UDP-N-acetylgluco 98.7 6.4E-08 2.2E-12 102.3 10.5 151 466-671 174-334 (364)
227 2xci_A KDO-transferase, 3-deox 98.6 3.6E-08 1.2E-12 105.2 8.4 146 476-670 199-355 (374)
228 3ly7_A Transcriptional activat 98.6 6.5E-07 2.2E-11 93.5 16.7 76 142-218 269-344 (372)
229 3u64_A Protein TP_0956; tetrat 98.6 4.9E-07 1.7E-11 90.8 14.4 106 145-250 147-272 (301)
230 1pc2_A Mitochondria fission pr 98.6 6.2E-07 2.1E-11 81.6 12.5 95 167-261 15-114 (152)
231 1v4v_A UDP-N-acetylglucosamine 98.5 4.9E-07 1.7E-11 96.0 13.3 142 473-670 197-344 (376)
232 3qwp_A SET and MYND domain-con 98.5 3.7E-07 1.3E-11 99.0 11.3 108 158-265 295-426 (429)
233 3qwp_A SET and MYND domain-con 98.5 2.5E-07 8.4E-12 100.4 9.9 108 124-231 295-426 (429)
234 3dzc_A UDP-N-acetylglucosamine 98.5 7.3E-07 2.5E-11 95.8 13.5 155 464-671 218-378 (396)
235 1pc2_A Mitochondria fission pr 98.5 9.9E-07 3.4E-11 80.3 12.2 97 131-227 13-114 (152)
236 2o6l_A UDP-glucuronosyltransfe 98.5 1.8E-06 6E-11 80.9 14.3 97 571-672 67-166 (170)
237 3bee_A Putative YFRE protein; 98.5 6.1E-07 2.1E-11 75.3 9.8 71 146-216 2-75 (93)
238 3bee_A Putative YFRE protein; 98.5 7.2E-07 2.5E-11 74.8 10.0 72 180-251 2-76 (93)
239 3qww_A SET and MYND domain-con 98.5 5E-07 1.7E-11 97.9 11.4 93 162-254 310-423 (433)
240 3qww_A SET and MYND domain-con 98.4 6.1E-07 2.1E-11 97.2 11.4 93 129-221 311-424 (433)
241 2v5f_A Prolyl 4-hydroxylase su 98.4 2.1E-06 7.2E-11 73.4 12.0 76 150-225 5-87 (104)
242 4e6h_A MRNA 3'-END-processing 98.4 3.9E-06 1.3E-10 96.0 17.7 161 109-269 335-521 (679)
243 2v5f_A Prolyl 4-hydroxylase su 98.4 2.4E-06 8.1E-11 73.1 11.9 76 185-260 6-88 (104)
244 1uqt_A Alpha, alpha-trehalose- 98.4 1.1E-06 3.8E-11 96.6 11.7 181 437-668 223-428 (482)
245 3tsa_A SPNG, NDP-rhamnosyltran 98.3 1.3E-06 4.4E-11 93.3 10.7 142 473-670 217-366 (391)
246 2hy7_A Glucuronosyltransferase 98.3 6.2E-07 2.1E-11 96.7 7.8 121 476-662 223-354 (406)
247 2iyf_A OLED, oleandomycin glyc 98.3 5.5E-06 1.9E-10 89.6 13.6 143 473-670 231-377 (430)
248 3otg_A CALG1; calicheamicin, T 98.3 3E-06 1E-10 91.0 11.0 93 571-670 291-386 (412)
249 3t5t_A Putative glycosyltransf 98.2 3.1E-06 1.1E-10 92.4 10.9 167 437-661 253-439 (496)
250 3ot5_A UDP-N-acetylglucosamine 98.2 5E-06 1.7E-10 89.4 12.1 146 472-670 222-371 (403)
251 3ia7_A CALG4; glycosysltransfe 98.2 4.4E-06 1.5E-10 89.2 11.7 144 473-670 230-376 (402)
252 2uy1_A Cleavage stimulation fa 98.2 7.7E-05 2.6E-09 82.3 21.5 60 132-192 195-254 (493)
253 3u64_A Protein TP_0956; tetrat 98.2 6.1E-06 2.1E-10 82.8 10.7 111 106-216 141-272 (301)
254 4fzr_A SSFS6; structural genom 98.1 5.6E-06 1.9E-10 88.6 9.7 94 571-671 283-379 (398)
255 2p6p_A Glycosyl transferase; X 98.1 2.4E-05 8.1E-10 83.2 13.8 92 571-670 263-357 (384)
256 3rsc_A CALG2; TDP, enediyne, s 98.1 2.7E-05 9.4E-10 83.6 14.0 142 473-670 246-391 (415)
257 4hwg_A UDP-N-acetylglucosamine 98.0 6.7E-06 2.3E-10 87.8 6.6 149 464-667 193-349 (385)
258 2uy1_A Cleavage stimulation fa 98.0 0.00047 1.6E-08 76.0 21.3 113 150-267 286-399 (493)
259 3s2u_A UDP-N-acetylglucosamine 98.0 2.7E-05 9.4E-10 82.4 10.8 106 558-671 224-335 (365)
260 2iya_A OLEI, oleandomycin glyc 97.9 6.6E-05 2.3E-09 80.9 13.5 92 571-669 304-398 (424)
261 3oti_A CALG3; calicheamicin, T 97.8 2E-05 6.7E-10 84.4 7.6 90 571-671 282-376 (398)
262 1nzn_A CGI-135 protein, fissio 97.8 0.00015 5.2E-09 63.5 11.5 92 131-222 16-112 (126)
263 1nzn_A CGI-135 protein, fissio 97.8 0.00021 7.3E-09 62.5 11.8 99 164-262 15-118 (126)
264 1iir_A Glycosyltransferase GTF 97.8 0.00012 4.3E-09 78.6 12.5 92 571-670 284-378 (415)
265 2yjn_A ERYCIII, glycosyltransf 97.7 9.5E-05 3.3E-09 80.2 10.3 93 571-670 318-413 (441)
266 1rrv_A Glycosyltransferase GTF 97.7 0.00024 8.3E-09 76.3 13.3 93 571-671 285-380 (416)
267 3rhz_A GTF3, nucleotide sugar 97.6 0.00012 3.9E-09 76.6 9.2 91 573-671 215-313 (339)
268 4amg_A Snogd; transferase, pol 97.6 0.00014 4.9E-09 77.3 9.1 91 571-669 287-377 (400)
269 4h7y_A Dual specificity protei 97.6 0.0008 2.7E-08 60.2 12.1 123 145-269 8-144 (161)
270 3h4t_A Glycosyltransferase GTF 97.5 0.0011 3.8E-08 70.9 14.7 93 571-671 267-362 (404)
271 2c1x_A UDP-glucose flavonoid 3 97.5 0.0005 1.7E-08 74.9 11.7 141 473-662 270-414 (456)
272 3hbf_A Flavonoid 3-O-glucosylt 97.4 0.00086 2.9E-08 72.8 13.0 141 472-661 271-415 (454)
273 2pq6_A UDP-glucuronosyl/UDP-gl 97.4 0.0016 5.6E-08 71.4 15.2 144 473-662 294-441 (482)
274 4g26_A Pentatricopeptide repea 97.3 0.01 3.5E-07 65.3 20.4 149 121-269 31-192 (501)
275 2acv_A Triterpene UDP-glucosyl 97.3 0.0022 7.4E-08 70.1 14.5 149 473-669 275-435 (463)
276 3ffl_A Anaphase-promoting comp 97.3 0.0012 4E-08 60.5 10.0 131 119-262 23-165 (167)
277 4h7y_A Dual specificity protei 97.2 0.0045 1.6E-07 55.4 12.8 110 111-221 7-131 (161)
278 3ffl_A Anaphase-promoting comp 97.2 0.0017 5.8E-08 59.4 10.2 96 120-228 67-165 (167)
279 4g26_A Pentatricopeptide repea 97.0 0.041 1.4E-06 60.5 20.7 131 131-262 85-220 (501)
280 1y8m_A FIS1; mitochondria, unk 97.0 0.021 7.3E-07 50.7 14.4 75 183-257 38-116 (144)
281 2vch_A Hydroquinone glucosyltr 96.9 0.0063 2.2E-07 66.7 13.4 164 473-669 267-441 (480)
282 1y8m_A FIS1; mitochondria, unk 96.9 0.028 9.4E-07 50.0 14.2 81 147-227 36-120 (144)
283 3o48_A Mitochondria fission 1 96.8 0.012 4.2E-07 51.6 11.6 77 149-225 39-119 (134)
284 3o48_A Mitochondria fission 1 96.5 0.023 7.8E-07 49.8 11.2 74 184-257 40-117 (134)
285 3nb0_A Glycogen [starch] synth 96.4 0.0047 1.6E-07 69.2 7.9 70 556-625 471-553 (725)
286 4gns_B Protein CSD3, chitin bi 95.8 0.076 2.6E-06 60.7 14.1 115 129-244 261-397 (754)
287 3kae_A CDC27, possible protein 95.8 1.1 3.6E-05 40.9 18.1 29 222-250 212-240 (242)
288 3mkq_B Coatomer subunit alpha; 95.3 0.36 1.2E-05 44.6 14.0 103 123-243 12-114 (177)
289 1ya0_A SMG-7 transcript varian 95.2 0.083 2.8E-06 57.6 10.9 81 185-265 153-233 (497)
290 1zbp_A Hypothetical protein VP 94.9 0.41 1.4E-05 47.3 13.9 122 124-252 5-134 (273)
291 2ff4_A Probable regulatory pro 94.8 0.4 1.4E-05 50.6 14.8 106 128-246 127-233 (388)
292 1ya0_A SMG-7 transcript varian 94.6 0.13 4.6E-06 56.0 10.8 79 152-230 154-232 (497)
293 3mkq_A Coatomer beta'-subunit; 94.3 0.33 1.1E-05 56.0 13.9 44 128-176 664-707 (814)
294 2ff4_A Probable regulatory pro 94.1 0.6 2E-05 49.3 14.2 63 150-212 171-233 (388)
295 1psw_A ADP-heptose LPS heptosy 94.0 0.08 2.7E-06 54.8 7.0 52 574-629 244-295 (348)
296 3hbm_A UDP-sugar hydrolase; PS 93.9 0.21 7.2E-06 50.2 9.7 76 557-643 197-272 (282)
297 3kae_A CDC27, possible protein 93.8 0.85 2.9E-05 41.5 12.3 103 147-254 30-150 (242)
298 4gns_B Protein CSD3, chitin bi 93.1 0.32 1.1E-05 55.6 10.5 106 163-269 261-388 (754)
299 3mkq_A Coatomer beta'-subunit; 91.5 1.5 5.2E-05 50.2 14.0 79 160-243 662-748 (814)
300 3txn_A 26S proteasome regulato 91.3 1.6 5.6E-05 45.8 12.6 117 131-247 74-210 (394)
301 4b4t_R RPN7, 26S proteasome re 91.1 0.72 2.5E-05 49.3 9.9 101 149-249 130-239 (429)
302 4b4t_S RPN3, 26S proteasome re 91.1 2 6.9E-05 46.5 13.2 142 126-269 146-328 (523)
303 4fhn_B Nucleoporin NUP120; pro 90.5 2.4 8.1E-05 51.4 14.7 141 124-269 820-988 (1139)
304 3spa_A Mtrpol, DNA-directed RN 90.4 2.9 0.0001 49.1 14.4 94 153-246 130-229 (1134)
305 3tov_A Glycosyl transferase fa 90.2 0.61 2.1E-05 48.4 8.1 54 572-629 242-295 (349)
306 2gt1_A Lipopolysaccharide hept 90.1 0.77 2.6E-05 46.8 8.7 82 574-659 236-321 (326)
307 1qsa_A Protein (soluble lytic 89.6 4.4 0.00015 45.3 14.9 118 128-246 226-347 (618)
308 1zbp_A Hypothetical protein VP 89.1 1.6 5.4E-05 43.1 9.5 59 194-252 7-65 (273)
309 4b4t_P 26S proteasome regulato 88.5 5.2 0.00018 42.8 14.1 98 150-247 137-247 (445)
310 3mkq_B Coatomer subunit alpha; 87.9 4 0.00014 37.6 10.9 79 149-243 7-85 (177)
311 2jzc_A UDP-N-acetylglucosamine 85.4 0.5 1.7E-05 45.7 3.5 75 573-654 115-193 (224)
312 3spa_A Mtrpol, DNA-directed RN 85.1 14 0.00047 43.5 15.6 94 121-214 132-231 (1134)
313 3txn_A 26S proteasome regulato 82.5 9.3 0.00032 40.0 12.0 92 122-213 105-210 (394)
314 4b4t_R RPN7, 26S proteasome re 81.1 8.7 0.0003 40.8 11.5 95 121-215 136-239 (429)
315 4fhn_B Nucleoporin NUP120; pro 79.3 8.6 0.00029 46.4 11.9 111 155-269 817-955 (1139)
316 1qsa_A Protein (soluble lytic 74.7 1.1E+02 0.0037 33.9 21.8 113 156-269 220-336 (618)
317 4b4t_P 26S proteasome regulato 73.7 36 0.0012 36.1 13.7 92 122-213 143-247 (445)
318 4gq2_M Nucleoporin NUP120; bet 67.9 31 0.0011 40.6 12.6 122 126-265 820-949 (950)
319 2wpv_A GET4, UPF0363 protein Y 66.3 86 0.0029 31.5 13.7 27 216-242 132-158 (312)
320 3lpz_A GET4 (YOR164C homolog); 63.4 1.3E+02 0.0043 30.6 14.3 27 215-241 133-159 (336)
321 2fp4_B Succinyl-COA ligase [GD 61.9 12 0.00039 39.4 6.5 110 546-660 265-394 (395)
322 4gq2_M Nucleoporin NUP120; bet 60.4 48 0.0016 39.0 12.2 51 156-210 816-866 (950)
323 2nu8_B SCS-beta, succinyl-COA 58.1 19 0.00066 37.5 7.4 110 546-660 258-387 (388)
324 1wy6_A Hypothetical protein ST 57.2 1E+02 0.0035 27.1 11.0 52 161-212 102-153 (172)
325 4b4t_S RPN3, 26S proteasome re 57.1 12 0.00043 40.4 5.8 66 150-217 231-303 (523)
326 3esl_A Checkpoint serine/threo 56.7 1.1E+02 0.0038 28.5 11.5 64 184-248 80-145 (202)
327 1wy6_A Hypothetical protein ST 56.4 43 0.0015 29.5 7.8 117 126-247 17-154 (172)
328 1g60_A Adenine-specific methyl 56.4 7.1 0.00024 38.3 3.6 33 590-623 211-243 (260)
329 3esl_A Checkpoint serine/threo 52.8 70 0.0024 29.9 9.4 79 137-216 58-147 (202)
330 2l2q_A PTS system, cellobiose- 51.5 60 0.002 26.8 8.2 66 556-625 20-87 (109)
331 2c4m_A Glycogen phosphorylase; 48.7 96 0.0033 35.3 11.5 52 571-622 592-649 (796)
332 3lvg_A Clathrin heavy chain 1; 46.0 0.0048 1.6E-07 65.8 -22.2 136 113-265 141-276 (624)
333 2pln_A HP1043, response regula 44.9 1.3E+02 0.0045 24.8 11.0 96 554-658 28-131 (137)
334 1l5w_A Maltodextrin phosphoryl 42.7 1.3E+02 0.0045 34.2 11.4 52 571-622 602-659 (796)
335 2crb_A Nuclear receptor bindin 42.1 38 0.0013 27.2 4.9 26 220-245 17-42 (97)
336 2v6y_A AAA family ATPase, P60 41.3 44 0.0015 26.3 5.3 19 194-212 21-39 (83)
337 1boo_A Protein (N-4 cytosine-s 40.9 12 0.00039 38.1 2.3 48 590-638 251-298 (323)
338 3ax2_A Mitochondrial import re 40.3 64 0.0022 24.8 5.8 30 155-184 22-51 (73)
339 2hqs_H Peptidoglycan-associate 40.0 78 0.0027 26.5 7.2 83 490-599 23-113 (118)
340 2aiz_P Outer membrane protein 39.9 49 0.0017 28.6 6.0 76 475-579 31-109 (134)
341 2f62_A Nucleoside 2-deoxyribos 39.1 37 0.0013 30.6 5.1 63 557-623 29-107 (161)
342 3mm4_A Histidine kinase homolo 38.2 1.3E+02 0.0046 27.4 9.3 102 554-661 71-197 (206)
343 3to5_A CHEY homolog; alpha(5)b 38.1 1.9E+02 0.0064 24.7 10.8 98 554-657 22-130 (134)
344 3ax2_A Mitochondrial import re 37.5 75 0.0026 24.4 5.8 29 190-218 23-51 (73)
345 3u84_A Menin; MLL, JUND, ledgf 37.0 2.5E+02 0.0085 29.2 11.2 45 203-247 298-347 (550)
346 2gj4_A Glycogen phosphorylase, 36.1 2.2E+02 0.0076 32.5 11.9 53 571-623 626-684 (824)
347 3re2_A Predicted protein; meni 35.8 1.7E+02 0.0058 29.9 9.5 82 152-247 237-325 (472)
348 2zay_A Response regulator rece 35.7 1.7E+02 0.0057 24.4 9.0 96 555-657 19-125 (147)
349 2zvy_A Chemotaxis protein MOTB 35.3 62 0.0021 29.7 6.1 79 476-579 62-144 (183)
350 3heb_A Response regulator rece 34.9 2E+02 0.007 24.1 11.0 99 554-657 14-132 (152)
351 1eg2_A Modification methylase 33.7 22 0.00076 35.9 3.1 34 590-624 241-274 (319)
352 3t5x_A PCI domain-containing p 33.5 77 0.0026 29.5 6.6 33 151-183 15-47 (203)
353 2ijq_A Hypothetical protein; s 33.1 1.8E+02 0.0062 26.0 8.6 57 156-212 38-103 (161)
354 3lpz_A GET4 (YOR164C homolog); 32.8 4E+02 0.014 26.9 16.6 26 182-207 134-159 (336)
355 2kgw_A Outer membrane protein 32.7 63 0.0022 27.5 5.5 68 485-579 33-103 (129)
356 3t5v_B Nuclear mRNA export pro 32.2 1E+02 0.0036 32.7 8.1 105 165-269 141-282 (455)
357 3t5x_A PCI domain-containing p 31.8 88 0.003 29.1 6.7 32 220-251 16-47 (203)
358 4had_A Probable oxidoreductase 31.6 57 0.002 33.0 5.9 55 558-619 60-115 (350)
359 2oyy_A Hexameric cytochrome; a 31.3 50 0.0017 25.0 3.7 33 638-670 5-45 (76)
360 2crb_A Nuclear receptor bindin 31.2 73 0.0025 25.6 4.9 22 189-210 20-41 (97)
361 2ijq_A Hypothetical protein; s 31.0 1.8E+02 0.0062 26.0 8.2 60 188-247 36-104 (161)
362 3ors_A N5-carboxyaminoimidazol 31.0 1.5E+02 0.005 26.6 7.5 115 557-672 19-149 (163)
363 4gq4_A Menin; tumor suppressor 30.8 2.7E+02 0.0094 29.0 10.3 57 202-258 282-349 (489)
364 3kuu_A Phosphoribosylaminoimid 30.7 2.3E+02 0.0078 25.6 8.8 115 557-672 28-158 (174)
365 3td3_A Outer membrane protein 30.3 69 0.0024 26.9 5.3 63 490-579 31-94 (123)
366 3t5v_B Nuclear mRNA export pro 29.5 1E+02 0.0034 32.8 7.4 87 131-217 141-254 (455)
367 3ldt_A Outer membrane protein, 28.7 85 0.0029 28.2 5.9 83 490-599 71-161 (169)
368 2qzj_A Two-component response 28.1 2.2E+02 0.0075 23.5 8.3 98 555-659 15-120 (136)
369 3uuw_A Putative oxidoreductase 27.7 74 0.0025 31.5 5.8 52 558-619 43-95 (308)
370 3h1g_A Chemotaxis protein CHEY 27.6 2.4E+02 0.0084 22.8 11.0 100 554-657 15-124 (129)
371 2w2u_A Hypothetical P60 katani 27.1 89 0.003 24.5 4.9 21 227-247 28-48 (83)
372 1xmp_A PURE, phosphoribosylami 27.0 3.5E+02 0.012 24.3 9.5 116 556-672 26-157 (170)
373 3hdv_A Response regulator; PSI 26.8 2.6E+02 0.0088 22.8 11.2 99 554-659 17-126 (136)
374 2k1s_A Inner membrane lipoprot 26.6 91 0.0031 27.3 5.5 87 485-598 43-140 (149)
375 1qkk_A DCTD, C4-dicarboxylate 26.4 2.9E+02 0.0098 23.2 10.5 99 554-659 13-120 (155)
376 2wpv_A GET4, UPF0363 protein Y 26.3 4.9E+02 0.017 25.8 16.2 27 182-208 132-158 (312)
377 4fb5_A Probable oxidoreductase 26.2 55 0.0019 33.5 4.7 89 482-619 34-123 (393)
378 3oon_A Outer membrane protein 25.6 1.5E+02 0.005 24.8 6.5 68 485-579 26-97 (123)
379 3lxu_X Tripeptidyl-peptidase 2 25.4 4.3E+02 0.015 32.1 12.3 52 214-266 1280-1331(1354)
380 2w2u_A Hypothetical P60 katani 25.2 82 0.0028 24.7 4.4 20 194-213 29-48 (83)
381 3cyp_B Chemotaxis protein MOTB 25.1 79 0.0027 27.3 4.8 70 487-579 15-88 (138)
382 3kht_A Response regulator; PSI 25.1 2.9E+02 0.0099 22.8 10.9 99 554-657 15-125 (144)
383 3ufx_B Succinyl-COA synthetase 25.0 72 0.0025 33.2 5.2 107 554-666 256-382 (397)
384 4a1g_A Mitotic checkpoint seri 24.6 83 0.0028 27.9 4.7 116 129-248 3-131 (152)
385 2j48_A Two-component sensor ki 24.5 2.5E+02 0.0084 21.8 8.2 90 555-654 12-112 (119)
386 2i2x_B MTAC, methyltransferase 24.3 1.1E+02 0.0038 29.5 6.2 109 553-670 136-254 (258)
387 2br9_A 14-3-3E, 14-3-3 protein 24.2 4.6E+02 0.016 24.8 11.0 94 153-246 8-201 (234)
388 1r1m_A Outer membrane protein 24.1 1.1E+02 0.0037 27.4 5.6 68 485-579 24-94 (164)
389 2rjn_A Response regulator rece 24.0 3.2E+02 0.011 22.8 10.6 103 554-663 17-129 (154)
390 1k68_A Phytochrome response re 23.8 2.9E+02 0.0099 22.3 10.6 99 554-657 12-128 (140)
391 3ubw_A 14-3-3E, 14-3-3 protein 23.8 5E+02 0.017 25.1 11.2 43 119-161 34-77 (261)
392 2v6y_A AAA family ATPase, P60 23.3 93 0.0032 24.4 4.4 9 202-210 10-18 (83)
393 3lp6_A Phosphoribosylaminoimid 23.1 4E+02 0.014 24.0 8.9 115 556-671 22-150 (174)
394 2yvq_A Carbamoyl-phosphate syn 22.9 3.7E+02 0.013 23.2 10.3 56 562-619 61-130 (143)
395 3nbm_A PTS system, lactose-spe 22.4 34 0.0012 28.5 1.7 75 557-635 23-101 (108)
396 4erh_A Outer membrane protein 22.3 1E+02 0.0035 26.8 5.0 68 485-579 31-103 (148)
397 2zig_A TTHA0409, putative modi 22.2 59 0.002 32.2 3.8 35 590-625 234-268 (297)
398 2zov_A Chemotaxis protein MOTB 22.0 1.2E+02 0.004 28.5 5.6 79 476-579 73-155 (210)
399 3trh_A Phosphoribosylaminoimid 21.9 4.4E+02 0.015 23.7 11.2 115 557-672 22-152 (169)
400 1om2_A Protein (mitochondrial 21.8 99 0.0034 25.0 4.2 28 155-182 25-52 (95)
401 3re2_A Predicted protein; meni 21.7 2.3E+02 0.008 28.9 7.7 44 169-212 276-324 (472)
402 2ywx_A Phosphoribosylaminoimid 21.7 3.2E+02 0.011 24.2 7.9 112 556-671 14-138 (157)
403 4a5x_A MITD1, MIT domain-conta 21.7 1.3E+02 0.0044 23.8 4.9 18 229-246 27-44 (86)
404 1om2_A Protein (mitochondrial 21.2 1.1E+02 0.0037 24.8 4.3 29 188-216 24-52 (95)
405 3jte_A Response regulator rece 21.0 2.8E+02 0.0097 22.7 7.7 99 554-659 13-122 (143)
406 3j20_B 30S ribosomal protein S 20.8 85 0.0029 29.3 4.2 65 556-621 76-141 (202)
407 4aez_C MAD3, mitotic spindle c 20.8 3.9E+02 0.013 25.2 8.9 49 168-216 132-182 (223)
408 3lua_A Response regulator rece 20.7 3.5E+02 0.012 22.1 8.7 99 554-659 14-126 (140)
409 3p9z_A Uroporphyrinogen III co 20.6 85 0.0029 29.6 4.4 97 557-660 122-227 (229)
410 3s0y_A Motility protein B; pep 20.3 1.3E+02 0.0043 27.7 5.4 87 490-599 76-171 (193)
411 3goe_A DNA repair protein RAD6 20.3 94 0.0032 24.2 3.5 44 554-597 30-82 (82)
412 2qxy_A Response regulator; reg 20.2 3.6E+02 0.012 22.0 9.0 99 554-659 14-120 (142)
413 1s2d_A Purine trans deoxyribos 20.0 86 0.003 28.2 4.0 36 586-621 76-116 (167)
No 1
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=100.00 E-value=3.8e-89 Score=791.23 Aligned_cols=521 Identities=50% Similarity=0.780 Sum_probs=429.7
Q ss_pred cCCCChhHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSYIIS-VLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
..|+++.++..++. +..+|++++|+.+|+++++++|++..+++++|.+|.++|++++|+.+|+++++++|++..+|+++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 45888888866655 55699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG- 269 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~- 269 (673)
|.++..+|++++|+++|+++++++|+++.+++++|.+|.++|++++|+++|++|++++|++..++.+||.++..+|+++
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred --------cccC--------------------CCCHHH------------------------------------------
Q psy17691 270 --------FFIR--------------------TDLNSA------------------------------------------ 279 (673)
Q Consensus 270 --------l~l~--------------------p~~~~a------------------------------------------ 279 (673)
+++. +.....
T Consensus 164 A~~~~~kal~l~~~~~~~~~l~~~~~~~~l~~~~~~~~~~aia~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~klrIGyv 243 (723)
T 4gyw_A 164 YDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYV 243 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSSCTTGGGGSCCCHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCSSTTTTTCEEEEEE
T ss_pred HHHHHHHHHHhChhHHhhccCcccchhhhhhhhcCHHHHHHHHHHHHHhhhhhhhcccCccccCccccccccccceeeee
Confidence 1111 111111
Q ss_pred ----------HHHHHHHhhccccc----cc--cc-------------chhhhhhh---------hh-----hhhhh--cc
Q psy17691 280 ----------YFWLLLLDAHSNLA----SI--HK-------------DSVVMSLL---------QI-----IHEFI--VG 314 (673)
Q Consensus 280 ----------~~~l~~~~~~~~~~----~~--~~-------------~~~~~~l~---------~~-----~DiLv--~G 314 (673)
++..++...|++-. .+ .. .++|.+++ +. ||||| +|
T Consensus 244 S~df~~H~v~~~~~~~~~~~d~~~fei~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~i~~d~iDIlidl~g 323 (723)
T 4gyw_A 244 SSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEANHFIDLSQIPCNGKAADRIHQDGIHILVNMNG 323 (723)
T ss_dssp ESCSSSSHHHHHHTTHHHHSCTTTEEEEEEESSCCCSCHHHHHHHHHSSEEEEGGGCCCHHHHHHHHHHTTCSEEEESCS
T ss_pred chhhccCcHHHHHHHHHHHhccCceeEEEEEcCCCCccHHHHHHHHhhccccccccCCcHHHHHHHHHhccceeEEeccC
Confidence 11111111111100 00 00 02232222 11 49999 66
Q ss_pred ---------ccccchhhhhhhhcCCCCCCCcccccccccCccCchhhhHHHHhhhccCCCccccccccccCchhhhhhhh
Q psy17691 315 ---------FDLTFYLFQVMWLGYPGTSGASYMDYIITDAVTSPLALASQYSEKLAFMPDTYFIGDHNQMFPHLKERFIV 385 (673)
Q Consensus 315 ---------fa~rpApvQ~~~lGyp~ttG~~~~Dy~l~d~~~~p~~~~~~ysE~l~~lp~~~~~~~~~~~~~~~~~~~~~ 385 (673)
|++|||||||+|||||+|||+++|||+|+|++++|++.+.+||||++|||++|+|+++...+|.+......
T Consensus 324 ~t~~~r~~i~a~r~APvQv~~lG~p~TtG~~~iDY~i~D~~~~P~~~~~~ysEklirLP~~~~~~d~~~~~p~~~~~~~~ 403 (723)
T 4gyw_A 324 YTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVI 403 (723)
T ss_dssp SBTTCCTHHHHTCCSSEEEECSSCSSCCCCTTCCEEEECTTTSCGGGGGGCSSEEEECSSCSCCCCHHHHCGGGSSCEEE
T ss_pred CCCCCcchhhhcCCCCceeeeccCCCCCCCCcCCEEEeCCCCCCchhhhcceeeeeeCCCccccCCcccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998877765432111
Q ss_pred ccc-----cccc-----------cccCCCccccc----------CC---CCccchh-hhhhhhccccccccccceeeecC
Q psy17691 386 SGK-----YSEK-----------LAFMPDTYFIG----------DH---NQMFPHL-KERFIVSGKTMIASGQVQTSVNG 435 (673)
Q Consensus 386 ~~~-----~~~~-----------~~~~~~~~~~~----------~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~ 435 (673)
... |++. ....|+..+.. +. ....|.+ .+.+..+..++...|++...++|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~g 483 (723)
T 4gyw_A 404 DFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMNTIAEAVIEMINRGQIQITING 483 (723)
T ss_dssp CCC---CCCSSSEEEECTTHHHHHHTSSSCEEEC-----------------CEEEECSSHHHHHHHHHHHHTCCEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 000 0000 00000000000 00 0000000 01111223456677888999999
Q ss_pred ceeccCccccccccccccCcccCcccccccccccCCCCCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCc
Q psy17691 436 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAV 515 (673)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~ 515 (673)
+.+.+|+.+.+.+......++.|.+....+|+.+|||++.|||||||+++||+|+++++|++||++||+|+|||+.
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~R~~~gLp~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~---- 559 (723)
T 4gyw_A 484 FSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLR---- 559 (723)
T ss_dssp EEEEETTCHHHHCHHHHHTSSCCCSEEEEEGGGGTCCTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEE----
T ss_pred cccccccccccccccccccccccccccccchhhcCCCCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEe----
Confidence 9999999999999888888899988888999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEE
Q psy17691 516 GEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC 595 (673)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~ 595 (673)
++...+++++++++++||+++||+|.++++.++|++.|+.+||+
T Consensus 560 ------------------------------------~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~ 603 (723)
T 4gyw_A 560 ------------------------------------FPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVC 603 (723)
T ss_dssp ------------------------------------TTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEE
T ss_pred ------------------------------------CcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEE
Confidence 24556789999999999999999999999999999999999999
Q ss_pred ecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 596 LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 596 Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
|||||||||||++|||||||||||+.|++|+||+|+|+|+++||+||||.|.+|||++|++||+|+++|+++|.++.
T Consensus 604 LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~~~l~~lr~~l~ 680 (723)
T 4gyw_A 604 LDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVW 680 (723)
T ss_dssp ECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred eCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998763
No 2
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=100.00 E-value=2.2e-55 Score=485.19 Aligned_cols=237 Identities=16% Similarity=0.176 Sum_probs=206.1
Q ss_pred hhhhh--cc---------ccccchhhhhhhhcCCCCCCCcccccccccCccCchhhhHHHHhhhccCCCccccccccccC
Q psy17691 308 IHEFI--VG---------FDLTFYLFQVMWLGYPGTSGASYMDYIITDAVTSPLALASQYSEKLAFMPDTYFIGDHNQMF 376 (673)
Q Consensus 308 ~DiLv--~G---------fa~rpApvQ~~~lGyp~ttG~~~~Dy~l~d~~~~p~~~~~~ysE~l~~lp~~~~~~~~~~~~ 376 (673)
+|||| +| +++|||||||+|||||+|||+++|||+|+|+...| .+.+|+|+++|||++|+|+++...
T Consensus 350 IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~TTGl~~iDY~i~D~~~~~--~~~~ysEklirLP~~~~~~~p~~~- 426 (631)
T 3q3e_A 350 AAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATTHSDFIEYVIVEDDYVG--SEECFSETLLRLPKDALPYVPSAL- 426 (631)
T ss_dssp CSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCSCCCCTTCCEEEEEGGGCC--CGGGCSSEEEEECTTSSCCCCCTT-
T ss_pred CCEEEECCCCCCchhHHHHhCCCchheEeccCCCcccCcccCCEEEeCCCCCC--cccCceeeEEECCCCccccCCccc-
Confidence 49999 55 56999999999999999999999999999997665 478999999999999998542100
Q ss_pred chhhhhhhhccccccccccCCCcccccCCCCccchhhhhhhhccccccccccceeeecCceeccCccccccccccccCcc
Q psy17691 377 PHLKERFIVSGKYSEKLAFMPDTYFIGDHNQMFPHLKERFIVSGKTMIASGQVQTSVNGIVLQNGLATNQTNTKTATGEE 456 (673)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (673)
T Consensus 427 -------------------------------------------------------------------------------- 426 (631)
T 3q3e_A 427 -------------------------------------------------------------------------------- 426 (631)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccccccccCCCCC--cEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCcc
Q psy17691 457 VPQSIVITSRQQYGLPED--AIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSAS 534 (673)
Q Consensus 457 ~~~~~~~~~r~~~~l~~~--~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (673)
.+.|..+|++++ .|||||||++.|++|+++++|++||+++|+++||+... |+
T Consensus 427 ------~p~r~~~~lp~~~G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~---g~----------------- 480 (631)
T 3q3e_A 427 ------APEKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFAL---GQ----------------- 480 (631)
T ss_dssp ------CCSSCCCCCCSCCSEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEE---SS-----------------
T ss_pred ------CCccccccCCcCCCeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEec---CC-----------------
Confidence 012445678865 89999999999999999999999999999999975320 00
Q ss_pred chhhhhccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcC
Q psy17691 535 TSIVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTG 614 (673)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~G 614 (673)
.++. ...+.+++.++||+ +||+|.|+++..+|++.|+.+||+||||||+||||++||||||
T Consensus 481 -----------------~~g~-~~~~~~~~~~~GI~-~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmG 541 (631)
T 3q3e_A 481 -----------------SNGI-THPYVERFIKSYLG-DSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLG 541 (631)
T ss_dssp -----------------CCGG-GHHHHHHHHHHHHG-GGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTT
T ss_pred -----------------Cchh-hHHHHHHHHHcCCC-ccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcC
Confidence 0122 34455667899997 8999999999999999999999999999999999999999999
Q ss_pred CceeecCCCcchhhhHHHHHHhcCCCcc-ccCCHHHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 615 TPVVTLPGETLASRVAASQLATLGCPEL-IARTHKEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 615 vPvvt~~g~~~~~r~~~~~l~~~gl~~~-ia~~~~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
|||||+.|+++++|+++|+|+++|++|| |+.|+++||++|++|++|+++|+++|.+..
T Consensus 542 VPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~~l~~LR~~Lr 600 (631)
T 3q3e_A 542 LVGVCKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQERLELRRYII 600 (631)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEeccCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999995 999999999999999999999999998764
No 3
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=100.00 E-value=9.9e-46 Score=420.36 Aligned_cols=416 Identities=29% Similarity=0.423 Sum_probs=335.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEA 210 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~a 210 (673)
++++|+.+|+++++++|++..++.++|.+|..+|++++|+++|+++++++|++..+++++|.++...|++++|++.|+++
T Consensus 38 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 117 (568)
T 2vsy_A 38 DTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRA 117 (568)
T ss_dssp CHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHH-----------HHHHH----c--CCC--
Q psy17691 211 IRIQPSFADAYSNMGNTLKEM---QDIQGALQCYSRAIQINPGFADAHSNLA-----------SIHKD----S--GKR-- 268 (673)
Q Consensus 211 l~~~p~~~~~~~~lg~~~~~~---g~~~eA~~~~~~Al~l~p~~~~a~~~La-----------~~~~~----~--g~~-- 268 (673)
++.+|++..++.++|.++..+ |++++|++.|+++++.+|++...+..++ ..+.. . ...
T Consensus 118 l~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (568)
T 2vsy_A 118 HQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPFAFLSEDASAAEQLACARTRAQAIAASVRPLAP 197 (568)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHHHHTTSCCCHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChHHHhCCCCHHHHHHHHHHHHHhccCcccCCCCC
Confidence 999999999999999999999 9999999999999999998765554443 11111 0 000
Q ss_pred -----c-----cccCC---CCHHHHHHHHHHhh--cccc-----c-cccc--ch----------hhh--------hhhhh
Q psy17691 269 -----G-----FFIRT---DLNSAYFWLLLLDA--HSNL-----A-SIHK--DS----------VVM--------SLLQI 307 (673)
Q Consensus 269 -----~-----l~l~p---~~~~a~~~l~~~~~--~~~~-----~-~~~~--~~----------~~~--------~l~~~ 307 (673)
. +.+.+ ......+...+... +.+. . .... .+ .+. .+.+.
T Consensus 198 ~~~~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (568)
T 2vsy_A 198 TRVRSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQASTLHDVTALGHLATAKH 277 (568)
T ss_dssp CCCCSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTSEEEECTTCCHHHHHHH
T ss_pred CCCCCCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcCeEEECCCCCHHHHHHH
Confidence 0 11111 12333433444433 3211 0 0000 00 111 11111
Q ss_pred -----hhhhh--cc---------ccccchhhhhhhhcCCCCCCCcccccccccCccCchhhhHHHHhhhccCCCcccccc
Q psy17691 308 -----IHEFI--VG---------FDLTFYLFQVMWLGYPGTSGASYMDYIITDAVTSPLALASQYSEKLAFMPDTYFIGD 371 (673)
Q Consensus 308 -----~DiLv--~G---------fa~rpApvQ~~~lGyp~ttG~~~~Dy~l~d~~~~p~~~~~~ysE~l~~lp~~~~~~~ 371 (673)
+||++ .| ++.+++|+|++|+||+.|+|+..+||+++|.+..+.+....|.|++..+|+.|....
T Consensus 278 i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~i~~ipn~~~~~~ 357 (568)
T 2vsy_A 278 IRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTSGAPWMDYVLGDAFALPPALEPFYSEHVLRLQGAFQPSD 357 (568)
T ss_dssp HHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCCCCTTCCEEEECTTTSCTTTGGGCSSEEEECSSCSCCCC
T ss_pred HHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcccCCCCceEEEECCCcCCcccccCCcceeEcCCCcCCCCC
Confidence 38876 22 677899999999999999999999999999998888877778888888887332100
Q ss_pred ccccCchhhhhhhhccccccccccCCCcccccCCCCccchhhhhhhhccccccccccceeeecCceeccCcccccccccc
Q psy17691 372 HNQMFPHLKERFIVSGKYSEKLAFMPDTYFIGDHNQMFPHLKERFIVSGKTMIASGQVQTSVNGIVLQNGLATNQTNTKT 451 (673)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (673)
.. +
T Consensus 358 ---------------------------~~---------~----------------------------------------- 360 (568)
T 2vsy_A 358 ---------------------------TS---------R----------------------------------------- 360 (568)
T ss_dssp ---------------------------TT---------C-----------------------------------------
T ss_pred ---------------------------CC---------C-----------------------------------------
Confidence 00 0
Q ss_pred ccCcccCcccccccccccCCCCCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCC
Q psy17691 452 ATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRP 531 (673)
Q Consensus 452 ~~~~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 531 (673)
.......|+++|++.+.++|++.+...|..+.++++|.+|+++.|+.+|+++|
T Consensus 361 -------~~~~~~~r~~~~~~~~~~v~~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G-------------------- 413 (568)
T 2vsy_A 361 -------VVAEPPSRTQCGLPEQGVVLCCFNNSYKLNPQSMARMLAVLREVPDSVLWLLS-------------------- 413 (568)
T ss_dssp -------CCCCCCCTGGGTCCTTSCEEEECCCGGGCCHHHHHHHHHHHHHCTTCEEEEEC--------------------
T ss_pred -------CCCCCCCccccCCCCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCcEEEEec--------------------
Confidence 00001357788999888888777766699999999999999999999999987
Q ss_pred CccchhhhhccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhh
Q psy17691 532 SASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL 611 (673)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal 611 (673)
.++...+.+++.++++|++++||+|+|.++.+++...|+.+||+++|+++++|+|++|||
T Consensus 414 --------------------~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAm 473 (568)
T 2vsy_A 414 --------------------GPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDAL 473 (568)
T ss_dssp --------------------CSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHH
T ss_pred --------------------CCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHH
Confidence 134557789999999999769999999999999999999999999999998899999999
Q ss_pred hcCCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 612 WTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 612 ~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
+||+|||+++|..+.++++++++..+|++|+|.+|.++|++.+.+|.+|++.+.+++..
T Consensus 474 a~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~~~~~~~~~~~~ 532 (568)
T 2vsy_A 474 WTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALASDPAALTALHAR 532 (568)
T ss_dssp HTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hCCCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988754
No 4
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.94 E-value=4.5e-25 Score=236.87 Aligned_cols=271 Identities=30% Similarity=0.445 Sum_probs=207.7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..++++++.+|.++.+|..+|.++...|+ |+...++..+|.++...|++++|.. .++.
T Consensus 48 ~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 126 (388)
T 1w3b_A 48 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQ-AYVS 126 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHH-HHHH
T ss_pred CHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 47889999999999999999999999999999986 7777888889999999999998876 5666
Q ss_pred HhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHHHH-HHHcCCHHHHHHHH
Q psy17691 66 TRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYIIS-VLLLIQVSEAEECY 139 (673)
Q Consensus 66 ~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~~~-~~~~g~~~~A~~~~ 139 (673)
+..+.|+.. ..++.++...++... +...+ .+..+|++..++..++. +...|++++|+..|
T Consensus 127 al~~~p~~~~~~~~l~~~~~~~g~~~~--------------A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 192 (388)
T 1w3b_A 127 ALQYNPDLYCVRSDLGNLLKALGRLEE--------------AKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHF 192 (388)
T ss_dssp HHHHCTTCTHHHHHHHHHHHTTSCHHH--------------HHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHccCHHH--------------HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 777777764 456777776665433 33332 34456777777755544 34477788888888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 140 NTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFAD 219 (673)
Q Consensus 140 ~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~ 219 (673)
+++++++|++..++..+|.++...|++++|+..|+++++.+|++..++.++|.++...|++++|++.|+++++.+|+++.
T Consensus 193 ~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 272 (388)
T 1w3b_A 193 EKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD 272 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Confidence 88888888777778888888888888888888888888888877777777888888888888888888888877777777
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHHHHH
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWLLLL 286 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~~~ 286 (673)
++.++|.++.+.|++++|+.+|+++++++|++..++.+++.++...|+++ +++.|++..++++++..
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 77778888877788888888888887777777777777777777777776 56677777777777644
No 5
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.94 E-value=1.5e-24 Score=232.88 Aligned_cols=272 Identities=25% Similarity=0.310 Sum_probs=247.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|++..++..+|.++...|+ |..+.+++.+|.++...|++++|.. .++.
T Consensus 14 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~-~~~~ 92 (388)
T 1w3b_A 14 DFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIE-HYRH 92 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHH-HHHH
Confidence 58999999999999999999999999999999986 7888999999999999999999986 6777
Q ss_pred HhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHHHHHH-HcCCHHHHHHHH
Q psy17691 66 TRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYIISVL-LLIQVSEAEECY 139 (673)
Q Consensus 66 ~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~~~~~-~~g~~~~A~~~~ 139 (673)
+..+.|++. ..++.++...++...+ +..+ .+..+|+....+..++.++ ..|++++|+.+|
T Consensus 93 al~~~p~~~~~~~~l~~~~~~~g~~~~A--------------~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 158 (388)
T 1w3b_A 93 ALRLKPDFIDGYINLAAALVAAGDMEGA--------------VQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACY 158 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHSCSSHH--------------HHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHHcCCHHHH--------------HHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHH
Confidence 888888874 5678888887775443 3332 4567899888886665554 589999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 140 NTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFAD 219 (673)
Q Consensus 140 ~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~ 219 (673)
+++++.+|++..++.++|.++...|++++|+..|+++++++|++..++.++|.++...|++++|+..|+++++++|++..
T Consensus 159 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 238 (388)
T 1w3b_A 159 LKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAV 238 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
++.++|.++..+|++++|+.+|+++++++|+++.++.++|.++...|+++ +++.|+++.++.+++...
T Consensus 239 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 239 VHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 678999999999888554
No 6
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.92 E-value=2.7e-22 Score=210.61 Aligned_cols=271 Identities=14% Similarity=0.136 Sum_probs=233.9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|+++.++..+|.++...|+ |+...+++.+|.++...|++++|.. .++.
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~ 96 (359)
T 3ieg_A 18 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAED-DFKK 96 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHH-HHHH
Confidence 58999999999999999999999999999999997 7788999999999999999999986 6777
Q ss_pred HhhcCC---Cchh---hh------------hhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-H
Q psy17691 66 TRELAP---GNRI---RI------------GYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-I 124 (673)
Q Consensus 66 ~~~l~p---~~~~---~l------------~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~ 124 (673)
+..+.| .+.. .+ +.++...++ ...++..+ .....|++...+... .
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~~~ 162 (359)
T 3ieg_A 97 VLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGAD--------------YTAAITFLDKILEVCVWDAELRELRAE 162 (359)
T ss_dssp HHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 777777 4431 12 333444333 34444444 456688888887555 4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH------------HHHH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHS------------NLAS 192 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~------------~la~ 192 (673)
.+...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++.+|++..++. .+|.
T Consensus 163 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 242 (359)
T 3ieg_A 163 CFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAE 242 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHH
Confidence 5567999999999999999999999999999999999999999999999999999999988665 4488
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 193 VLQQQGKLTDALLHYKEAIRIQPSFAD----AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~~p~~~~----~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
++...|++++|+..|+++++..|++.. ++..+|.++..+|++++|+.+|+++++.+|++..++.++|.++...|++
T Consensus 243 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 322 (359)
T 3ieg_A 243 ELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMY 322 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCH
Confidence 899999999999999999999999874 4678999999999999999999999999999999999999999999999
Q ss_pred c---------cccCCCCHHHHHHHHHH
Q psy17691 269 G---------FFIRTDLNSAYFWLLLL 286 (673)
Q Consensus 269 ~---------l~l~p~~~~a~~~l~~~ 286 (673)
+ ++++|+++.++..++.+
T Consensus 323 ~~A~~~~~~a~~~~p~~~~~~~~l~~~ 349 (359)
T 3ieg_A 323 DEAIQDYEAAQEHNENDQQIREGLEKA 349 (359)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 7 78999999988777644
No 7
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.91 E-value=4.1e-22 Score=217.41 Aligned_cols=272 Identities=14% Similarity=0.132 Sum_probs=235.7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|+++.++..+|.++...|+ |+...+++.+|.++...|++++|.. .++.
T Consensus 41 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 119 (450)
T 2y4t_A 41 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAED-DFKK 119 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 47899999999999999999999999999999997 7788899999999999999999986 6677
Q ss_pred HhhcCCCch---hhh---------------hhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-H
Q psy17691 66 TRELAPGNR---IRI---------------GYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-I 124 (673)
Q Consensus 66 ~~~l~p~~~---~~l---------------~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~ 124 (673)
+..+.|.+. ... +..+...++ ...++..+ .....|++...+..+ .
T Consensus 120 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~l~~ 185 (450)
T 2y4t_A 120 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGD--------------YTAAIAFLDKILEVCVWDAELRELRAE 185 (450)
T ss_dssp HHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 777777654 211 222333332 33444444 445678888877555 5
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH------------HH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL------------AS 192 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l------------a~ 192 (673)
.+...|++++|+.+|+++++.+|+++.++..+|.+|...|++++|+..|+++++.+|++...+..+ |.
T Consensus 186 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 265 (450)
T 2y4t_A 186 CFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAE 265 (450)
T ss_dssp HHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 566799999999999999999999999999999999999999999999999999999999888776 99
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 193 VLQQQGKLTDALLHYKEAIRIQPSFA----DAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
++...|++++|+..|+++++..|+++ .++.++|.++.+.|++++|+.+|+++++++|++..++.++|.++...|++
T Consensus 266 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 345 (450)
T 2y4t_A 266 ELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMY 345 (450)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999999985 47899999999999999999999999999999999999999999999999
Q ss_pred c---------cccCCCCHHHHHHHHHHh
Q psy17691 269 G---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 269 ~---------l~l~p~~~~a~~~l~~~~ 287 (673)
+ ++++|+++.++..++.+.
T Consensus 346 ~~A~~~~~~al~~~p~~~~~~~~l~~~~ 373 (450)
T 2y4t_A 346 DEAIQDYETAQEHNENDQQIREGLEKAQ 373 (450)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 8 789999999988887543
No 8
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.91 E-value=3e-22 Score=208.14 Aligned_cols=241 Identities=17% Similarity=0.131 Sum_probs=203.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcC-ChhhhcCChhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKG-QINVLHKPPYK 64 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g-~~~~A~~~~~~ 64 (673)
++++|+..|+++++.+|.+..++..++.++...|+ |+...+++.+|.++...| ++++|.
T Consensus 37 ~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~----- 111 (330)
T 3hym_B 37 DFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHAR----- 111 (330)
T ss_dssp CHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHH-----
Confidence 47899999999999999999999999999988886 334444444444444444 443332
Q ss_pred HHhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHH
Q psy17691 65 YTRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNT 141 (673)
Q Consensus 65 ~~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~ 141 (673)
..+ .+..+|++...+..+ ..+...|++++|+.+|++
T Consensus 112 -----------------------------------------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 150 (330)
T 3hym_B 112 -----------------------------------------RYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFT 150 (330)
T ss_dssp -----------------------------------------HHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred -----------------------------------------HHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 222 344567777777554 455679999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------
Q psy17691 142 ALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ------- 214 (673)
Q Consensus 142 al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~------- 214 (673)
+++..|++..++..+|.++...|++++|+..++++++.+|++..++.++|.++...|++++|+..++++++..
T Consensus 151 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 230 (330)
T 3hym_B 151 AAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEV 230 (330)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSC
T ss_pred HHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred --CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHH
Q psy17691 215 --PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWL 283 (673)
Q Consensus 215 --p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l 283 (673)
|....++.++|.++..+|++++|+.+|+++++++|++..++.++|.++...|+++ ++++|+++.++..+
T Consensus 231 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 310 (330)
T 3hym_B 231 TVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTML 310 (330)
T ss_dssp TTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHH
Confidence 6677899999999999999999999999999999999999999999999999987 78899999999888
Q ss_pred HHHh
Q psy17691 284 LLLD 287 (673)
Q Consensus 284 ~~~~ 287 (673)
+.+.
T Consensus 311 ~~~~ 314 (330)
T 3hym_B 311 GHCI 314 (330)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8643
No 9
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.90 E-value=2e-22 Score=199.26 Aligned_cols=158 Identities=23% Similarity=0.232 Sum_probs=144.8
Q ss_pred hcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHh
Q psy17691 111 ALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQ-----------GYIEEATRLYLKALE 178 (673)
Q Consensus 111 ~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~-----------g~~~eA~~~~~~al~ 178 (673)
..+|++..++..+ ..+...|++++|+..|+++++++|+++.++.++|.++..+ |++++|+..|+++++
T Consensus 33 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 33 KENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp TTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 3567777777555 4555689999999999999999999999999999999999 999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 179 VFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNL 258 (673)
Q Consensus 179 ~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~L 258 (673)
++|++..++.++|.++..+|++++|++.|+++++++ +++.++.++|.+|..+|++++|+..|+++++++|++..++.++
T Consensus 113 ~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~l 191 (217)
T 2pl2_A 113 VNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRY 191 (217)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCc
Q psy17691 259 ASIHKDSGKRG 269 (673)
Q Consensus 259 a~~~~~~g~~~ 269 (673)
|.++...|+++
T Consensus 192 a~~~~~~g~~~ 202 (217)
T 2pl2_A 192 ASALLLKGKAE 202 (217)
T ss_dssp HHHHTC-----
T ss_pred HHHHHHccCHH
Confidence 99999999876
No 10
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.90 E-value=8.2e-22 Score=208.85 Aligned_cols=241 Identities=18% Similarity=0.199 Sum_probs=189.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|++..++..+|.++...|+ |+...++..+|.++...|++++|.. .++.
T Consensus 79 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 157 (368)
T 1fch_A 79 DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACE-ILRD 157 (368)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 35677777777777777777777777777777775 5556666666666666666666654 3444
Q ss_pred HhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 66 TRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVLLLIQVSEAEECYNTALRL 145 (673)
Q Consensus 66 ~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 145 (673)
+..+.|............. ........+..++.++..|++++|+.+|+++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 210 (368)
T 1fch_A 158 WLRYTPAYAHLVTPAEEGA---------------------------GGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRL 210 (368)
T ss_dssp HHHTSTTTGGGCC------------------------------------------CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcCcHHHHHHHHHHh---------------------------hhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHh
Confidence 4444443321110000000 0000011111344555889999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 146 CPT--HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSN 223 (673)
Q Consensus 146 ~p~--~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 223 (673)
+|+ ++.++..+|.++...|++++|+.+|+++++.+|++..++.++|.++...|++++|+..|+++++++|++..++.+
T Consensus 211 ~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (368)
T 1fch_A 211 DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYN 290 (368)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHcCCCc
Q psy17691 224 MGNTLKEMQDIQGALQCYSRAIQINPGF-----------ADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 224 lg~~~~~~g~~~eA~~~~~~Al~l~p~~-----------~~a~~~La~~~~~~g~~~ 269 (673)
+|.+|..+|++++|+.+|++++++.|++ ..+|.+++.++..+|+++
T Consensus 291 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 347 (368)
T 1fch_A 291 LGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSD 347 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGG
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChH
Confidence 9999999999999999999999999988 899999999999999987
No 11
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.89 E-value=5.1e-22 Score=210.95 Aligned_cols=235 Identities=17% Similarity=0.137 Sum_probs=194.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|+++.++..+|.++..+|+ |+...++..+|.++...|++++|.. .++.
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 158 (365)
T 4eqf_A 80 DLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACE-ALKN 158 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHH-HHHH
Confidence 57899999999999999999999999999999997 6677778888888888888887764 3444
Q ss_pred HhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 66 TRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALR 144 (673)
Q Consensus 66 ~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~ 144 (673)
+..+.|....... .++ .....+ ..+..+...|++++|+.+|+++++
T Consensus 159 al~~~p~~~~~~~----~~~-----------------------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 205 (365)
T 4eqf_A 159 WIKQNPKYKYLVK----NKK-----------------------------GSPGLTRRMSKSPVDSSVLEGVKELYLEAAH 205 (365)
T ss_dssp HHHHCHHHHCC----------------------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHhCccchHHHh----hhc-----------------------------cchHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 4443332210000 000 000111 123445568899999999999999
Q ss_pred hCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 145 LCPT--HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYS 222 (673)
Q Consensus 145 ~~p~--~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 222 (673)
.+|+ ++.++..+|.++..+|++++|+.+|+++++.+|++..++.++|.++...|++++|+..|+++++++|++..++.
T Consensus 206 ~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 285 (365)
T 4eqf_A 206 QNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRY 285 (365)
T ss_dssp HSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHH
Confidence 9999 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHcCCCc
Q psy17691 223 NMGNTLKEMQDIQGALQCYSRAIQINPG------------FADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 223 ~lg~~~~~~g~~~eA~~~~~~Al~l~p~------------~~~a~~~La~~~~~~g~~~ 269 (673)
++|.+|..+|++++|+.+|+++++++|+ +..+|.+|+.++...|+.+
T Consensus 286 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 286 NLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 9999999999999999999999999887 3678999999999999876
No 12
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.88 E-value=6.3e-21 Score=197.84 Aligned_cols=239 Identities=16% Similarity=0.119 Sum_probs=199.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|++..++..+|.++...|+ |+...++..+|.++...|++++|.. .++.
T Consensus 36 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~-~~~~ 114 (327)
T 3cv0_A 36 NLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALA-SLRA 114 (327)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 47899999999999999999999999999999997 6677778888888888888888765 4444
Q ss_pred HhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHH--HHHcCCHHHHHHHHHHHH
Q psy17691 66 TRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIIS--VLLLIQVSEAEECYNTAL 143 (673)
Q Consensus 66 ~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~--~~~~g~~~~A~~~~~~al 143 (673)
+....|.......... ...++.......++. +...|++++|+.++++++
T Consensus 115 ~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 165 (327)
T 3cv0_A 115 WLLSQPQYEQLGSVNL-----------------------------QADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAAL 165 (327)
T ss_dssp HHHTSTTTTTC-------------------------------------------------CCTTSHHHHHHHHHHHHHHH
T ss_pred HHHhCCccHHHHHHHh-----------------------------HHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHH
Confidence 4444443321110000 000111111111133 556789999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 144 RLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSN 223 (673)
Q Consensus 144 ~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 223 (673)
+.+|++..++..+|.++...|++++|+.+++++++.+|++..++.++|.++...|++++|+..|+++++.+|++..++.+
T Consensus 166 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 245 (327)
T 3cv0_A 166 EMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYN 245 (327)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHcCCCc
Q psy17691 224 MGNTLKEMQDIQGALQCYSRAIQINPG------------FADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 224 lg~~~~~~g~~~eA~~~~~~Al~l~p~------------~~~a~~~La~~~~~~g~~~ 269 (673)
+|.++..+|++++|+.+|++++++.|+ +..++.+++.++...|+++
T Consensus 246 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 246 MAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 999999999999999999999999999 7999999999999999976
No 13
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.88 E-value=5.5e-21 Score=198.60 Aligned_cols=225 Identities=16% Similarity=0.193 Sum_probs=194.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-C---------------CCcHHHHHHHHHHHHHcCChhhhcCChhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKG-Q---------------PNFPDAYCNLANALKEKGQINVLHKPPYK 64 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g-~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~ 64 (673)
++++|+..++++++.+|+++.++..+|.++...| + |+...+++.+|.++...|++++|.. .++
T Consensus 71 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~ 149 (330)
T 3hym_B 71 KANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMA-AYF 149 (330)
T ss_dssp CHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHH-HHH
Confidence 4789999999999999999999999999999999 6 4555666666666666666666543 111
Q ss_pred HHhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHH
Q psy17691 65 YTRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFS-YIISVLLLIQVSEAEECYNTAL 143 (673)
Q Consensus 65 ~~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al 143 (673)
. .....|+....+. .+..+...|++++|+.+|++++
T Consensus 150 ~-------------------------------------------a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 186 (330)
T 3hym_B 150 T-------------------------------------------AAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQAL 186 (330)
T ss_dssp H-------------------------------------------HHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred H-------------------------------------------HHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 2334566555554 4455667999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 144 RLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVF---------PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ 214 (673)
Q Consensus 144 ~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~---------p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~ 214 (673)
+.+|++..++..+|.++...|++++|+.+++++++.. |....++.++|.++...|++++|+.+|+++++.+
T Consensus 187 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 187 SIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999986 6778899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCCc
Q psy17691 215 PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIH-KDSGKRG 269 (673)
Q Consensus 215 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~-~~~g~~~ 269 (673)
|++..++.++|.++..+|++++|+.+|+++++++|++..++..++.++ ...|+.+
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTTTTC--
T ss_pred ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHhCchh
Confidence 999999999999999999999999999999999999999999999988 5566543
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.88 E-value=8.7e-22 Score=211.71 Aligned_cols=154 Identities=14% Similarity=0.030 Sum_probs=90.8
Q ss_pred cCCCChhHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSYIIS-VLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
++|++..+|...+. +..+|++++|+.+|+++++++|++..+|+++|.++..+|++++|+.+|+++++++|++..+|+++
T Consensus 161 l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~l 240 (382)
T 2h6f_A 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 44555555543333 33456666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHH-cCCHHHH-----HHHHHHHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 191 ASVLQQ-QGKLTDA-----LLHYKEAIRIQPSFADAYSNMGNTLKEMQ--DIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 191 a~~~~~-~g~~~eA-----~~~~~~al~~~p~~~~~~~~lg~~~~~~g--~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
|.++.. .|.+++| +++|+++++++|++..+|+++|.++...| ++++|++.++++ +.+|++..++..||.+|
T Consensus 241 g~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~al~~La~~~ 319 (382)
T 2h6f_A 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPYLIAFLVDIY 319 (382)
T ss_dssp HHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHHHHHHHHHHH
Confidence 666666 3333555 35566666666666666666666666655 456666666555 55666666666666666
Q ss_pred HHcC
Q psy17691 263 KDSG 266 (673)
Q Consensus 263 ~~~g 266 (673)
.++|
T Consensus 320 ~~~~ 323 (382)
T 2h6f_A 320 EDML 323 (382)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5553
No 15
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.88 E-value=4.7e-20 Score=193.41 Aligned_cols=251 Identities=16% Similarity=0.134 Sum_probs=215.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------C---CcHHHHHHH------------HHHHH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------P---NFPDAYCNL------------ANALK 50 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~---~~a~a~~~l------------a~~l~ 50 (673)
++++|+..|+++++.+|++..++..+|.++...|+ | +....+..+ |..+.
T Consensus 52 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~ 131 (359)
T 3ieg_A 52 KSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAF 131 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999997 5 555566555 78899
Q ss_pred HcCChhhhcCChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-H
Q psy17691 51 EKGQINVLHKPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-I 124 (673)
Q Consensus 51 ~~g~~~~A~~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~ 124 (673)
..|++++|.. .++.+....|.+. ..++.++...++. ..++..+ .+...|++...+..+ .
T Consensus 132 ~~~~~~~A~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~A~~~~~~~~~~~~~~~~~~~~la~ 196 (359)
T 3ieg_A 132 DGADYTAAIT-FLDKILEVCVWDAELRELRAECFIKEGEP--------------RKAISDLKAASKLKSDNTEAFYKIST 196 (359)
T ss_dssp HTTCHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHTTCH--------------HHHHHHHHHHHTTCSCCHHHHHHHHH
T ss_pred HccCHHHHHH-HHHHHHHhCCCchHHHHHHHHHHHHCCCH--------------HHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999999986 6667777777664 4567777766653 3344443 455678888887555 4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHH------------HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH----HHH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTHADSLN------------NLANIKREQGYIEEATRLYLKALEVFPEFAA----AHS 188 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~------------~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~----~~~ 188 (673)
.+...|++++|+..|+++++.+|++..++. .+|.++...|++++|+..++++++..|++.. ++.
T Consensus 197 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 276 (359)
T 3ieg_A 197 LYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKE 276 (359)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 556799999999999999999999988765 4488899999999999999999999999874 467
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
.+|.++...|++++|+..|+++++.+|+++.++.++|.++...|++++|+.+|+++++++|++..++..++.++...+
T Consensus 277 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~ 354 (359)
T 3ieg_A 277 RICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLK 354 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999876654
No 16
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.8e-20 Score=212.28 Aligned_cols=269 Identities=17% Similarity=0.161 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhHH
Q psy17691 2 IDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKYT 66 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~ 66 (673)
+++|+..|+++++. |.+..++..+|.+|...|+ |+....+..++.++...|++++|.. .++..
T Consensus 288 ~~~A~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~ 365 (597)
T 2xpi_A 288 LRRAEDYLSSINGL-EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYL-ISNDL 365 (597)
T ss_dssp HHHHHHHHHTSTTG-GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHhhcC-CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHH-HHHHH
Confidence 67888888888877 7788888888888888887 3444556667777888888888775 44455
Q ss_pred hhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHH
Q psy17691 67 RELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-ISVLLLIQVSEAEECYN 140 (673)
Q Consensus 67 ~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~ 140 (673)
....|.+. ..++..+...++. .++...+ .....|++...|..+ ..+...|++++|+..|+
T Consensus 366 ~~~~~~~~~~~~~l~~~~~~~g~~--------------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 431 (597)
T 2xpi_A 366 VDRHPEKAVTWLAVGIYYLCVNKI--------------SEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYT 431 (597)
T ss_dssp HHHCTTSHHHHHHHHHHHHHTTCH--------------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HhhCcccHHHHHHHHHHHHHhccH--------------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 55556553 3455666665543 3334433 345678888787555 45567999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------C
Q psy17691 141 TALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI------Q 214 (673)
Q Consensus 141 ~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~------~ 214 (673)
++++..|++..++..+|.+|...|++++|++.|+++++.+|.++.++..+|.++...|++++|++.|+++++. +
T Consensus 432 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 511 (597)
T 2xpi_A 432 TAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSN 511 (597)
T ss_dssp HHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 6
Q ss_pred CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHHH
Q psy17691 215 PSF-ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 215 p~~-~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~ 284 (673)
|++ ..+|..+|.+|.+.|++++|++.|+++++++|++..++..++.+|...|+++ ++++|+++.++..++
T Consensus 512 p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 512 EKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLK 591 (597)
T ss_dssp SGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 664 7899999999999999999999999999999999999999999999999987 788999999998887
Q ss_pred HH
Q psy17691 285 LL 286 (673)
Q Consensus 285 ~~ 286 (673)
.+
T Consensus 592 ~~ 593 (597)
T 2xpi_A 592 RA 593 (597)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 17
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.87 E-value=4.9e-21 Score=189.23 Aligned_cols=173 Identities=16% Similarity=0.125 Sum_probs=162.1
Q ss_pred CCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy17691 114 PDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLAS 192 (673)
Q Consensus 114 p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~ 192 (673)
|++...+ ..+..+...|++++|+..|+++++.+|+++.+++++|.++..+|++++|+..|+++++++|++..+++++|.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 4455555 445566789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 193 VLQQQ-----------GKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 193 ~~~~~-----------g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
++..+ |++++|+..|+++++++|+++.++.++|.++..+|++++|+.+|+++++++ +++.++.++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~ 160 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAEL 160 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHH
Confidence 99999 999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 262 HKDSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 262 ~~~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
+...|+++ ++++|+++.++.+++.+.
T Consensus 161 ~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~ 195 (217)
T 2pl2_A 161 YLSMGRLDEALAQYAKALEQAPKDLDLRVRYASAL 195 (217)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 99999998 788999999999988654
No 18
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.87 E-value=1.3e-21 Score=210.25 Aligned_cols=177 Identities=11% Similarity=0.030 Sum_probs=157.9
Q ss_pred HhcCCCChhHHHHHH-HHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q psy17691 110 YALSPDDGTTFSYII-SVLLLIQ-VSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAH 187 (673)
Q Consensus 110 ~~l~p~~~~~~~~~~-~~~~~g~-~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 187 (673)
+.++|++..+|...+ .+..+|+ +++|+.+|+++++++|++..+|+++|.++..+|++++|+.+|+++++++|++..+|
T Consensus 124 l~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 124 IELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 346788888886555 4556886 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 188 SNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE-MQDIQGA-----LQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 188 ~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~eA-----~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
+++|.++..+|++++|+.+|+++++++|++..+|+++|.++.. .|..++| +.+|+++++++|++..+|.+++.+
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~l 283 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 283 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 5555788 599999999999999999999999
Q ss_pred HHHcCC--Cc--------cccCCCCHHHHHHHHHH
Q psy17691 262 HKDSGK--RG--------FFIRTDLNSAYFWLLLL 286 (673)
Q Consensus 262 ~~~~g~--~~--------l~l~p~~~~a~~~l~~~ 286 (673)
+...|. ++ ++.+|+++.++..++.+
T Consensus 284 l~~~g~~~~~~a~~~~~~~~~~p~~~~al~~La~~ 318 (382)
T 2h6f_A 284 LQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDI 318 (382)
T ss_dssp HTTTCGGGCHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred HHccCccchHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 998883 44 46788888888777643
No 19
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.86 E-value=1.1e-19 Score=198.11 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=215.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcH---HHHHH------------HHHHHH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFP---DAYCN------------LANALK 50 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a---~a~~~------------la~~l~ 50 (673)
++++|+..|+++++.+|++..++..+|.+|..+|+ |+.. ..+.. +|..+.
T Consensus 75 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~ 154 (450)
T 2y4t_A 75 KSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAF 154 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999997 4444 44433 366689
Q ss_pred HcCChhhhcCChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHH-H
Q psy17691 51 EKGQINVLHKPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYI-I 124 (673)
Q Consensus 51 ~~g~~~~A~~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~-~ 124 (673)
..|++++|.. .++.+....|.+. ..++.++...++... ++..+ .....|++...+..+ .
T Consensus 155 ~~~~~~~A~~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~--------------A~~~~~~~~~~~~~~~~~~~~l~~ 219 (450)
T 2y4t_A 155 GSGDYTAAIA-FLDKILEVCVWDAELRELRAECFIKEGEPRK--------------AISDLKAASKLKNDNTEAFYKIST 219 (450)
T ss_dssp HHTCHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHTTCGGG--------------GHHHHHHHHHHHCSCHHHHHHHHH
T ss_pred HcCCHHHHHH-HHHHHHHhCCCChHHHHHHHHHHHHCCCHHH--------------HHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999999986 6677777777664 456777777776443 33333 345578888887555 4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHhhCCCCH----HHHH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTHADSLNNL------------ANIKREQGYIEEATRLYLKALEVFPEFA----AAHS 188 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~L------------g~~~~~~g~~~eA~~~~~~al~~~p~~~----~~~~ 188 (673)
.+...|++++|+..|+++++.+|++...+..+ |.++...|++++|+.+|+++++..|+++ ..+.
T Consensus 220 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~ 299 (450)
T 2y4t_A 220 LYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKE 299 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 55679999999999999999999999988776 9999999999999999999999999985 4789
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
++|.++...|++++|+..++++++.+|+++.+|..+|.++..+|++++|+.+|+++++++|++..++..++.+....+
T Consensus 300 ~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 300 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLK 377 (450)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998766554
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.86 E-value=5.2e-21 Score=202.62 Aligned_cols=178 Identities=21% Similarity=0.316 Sum_probs=157.1
Q ss_pred HHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH----------------HHHHHHHHcCCHHHHHH
Q psy17691 109 CYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLN----------------NLANIKREQGYIEEATR 171 (673)
Q Consensus 109 ~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~----------------~Lg~~~~~~g~~~eA~~ 171 (673)
.+...|++..++..+ ..+...|++++|+..|+++++.+|++...+. .++.++ ..|++++|+.
T Consensus 124 al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~ 202 (368)
T 1fch_A 124 CLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKE 202 (368)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHH
Confidence 344567777777555 4556699999999999999999999877665 567666 8999999999
Q ss_pred HHHHHHhhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 172 LYLKALEVFPE--FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP 249 (673)
Q Consensus 172 ~~~~al~~~p~--~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p 249 (673)
.|+++++.+|. +..++.++|.++...|++++|+..|+++++.+|+++.++.++|.++..+|++++|+.+|+++++++|
T Consensus 203 ~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 203 LFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 99999999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCc---------cccCCCC-----------HHHHHHHHHHh
Q psy17691 250 GFADAHSNLASIHKDSGKRG---------FFIRTDL-----------NSAYFWLLLLD 287 (673)
Q Consensus 250 ~~~~a~~~La~~~~~~g~~~---------l~l~p~~-----------~~a~~~l~~~~ 287 (673)
++..++.++|.++...|+++ +.+.|++ ..++..++.+.
T Consensus 283 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 340 (368)
T 1fch_A 283 GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLAL 340 (368)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHH
Confidence 99999999999999999987 5566666 77777777543
No 21
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.1e-21 Score=211.89 Aligned_cols=266 Identities=18% Similarity=0.127 Sum_probs=177.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+| ++.++..+|.++...|+ |+...+++.+|.++...|++++|.. .++.
T Consensus 21 ~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 98 (514)
T 2gw1_A 21 KYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMF-DLSV 98 (514)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred cHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHH-HHHH
Confidence 58999999999999999 69999999999999997 8888999999999999999999986 5556
Q ss_pred HhhcCCCchhhhhhhh-------------hhc--------------------------------------CCCcccc---
Q psy17691 66 TRELAPGNRIRIGYVS-------------SDF--------------------------------------GNHPTSH--- 91 (673)
Q Consensus 66 ~~~l~p~~~~~l~~~~-------------~~l--------------------------------------~~~~~a~--- 91 (673)
+....|.......... ..+ +......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (514)
T 2gw1_A 99 LSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELTFA 178 (514)
T ss_dssp HHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCCCCCS
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHHHH
Confidence 6666653321110000 000 0000000
Q ss_pred -----------c------ccccCCCCchhHHHHHHH--h-----c--CCC-------ChhHHHH-HHHHHHcCCHHHHHH
Q psy17691 92 -----------L------MQSVPGMHNKSRVEIFCY--A-----L--SPD-------DGTTFSY-IISVLLLIQVSEAEE 137 (673)
Q Consensus 92 -----------~------~~~~~~~~~~~a~~~~~~--~-----l--~p~-------~~~~~~~-~~~~~~~g~~~~A~~ 137 (673)
. ...........++..+.. . + .|+ ....+.. +..+...|++++|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 258 (514)
T 2gw1_A 179 NYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHE 258 (514)
T ss_dssp SCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 0 000001222333333321 1 2 222 2333332 334445677777777
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 138 CYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF 217 (673)
Q Consensus 138 ~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~ 217 (673)
+|+++++.+|+ ..++..+|.++...|++++|+..++++++.+|.+..++..+|.++...|++++|+..|+++++.+|++
T Consensus 259 ~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 337 (514)
T 2gw1_A 259 DIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPEN 337 (514)
T ss_dssp HHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSC
T ss_pred HHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhh
Confidence 77777777777 77777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 218 ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 218 ~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
..++..+|.++...|++++|+.+|+++++..|++..++.++|.++...|+++
T Consensus 338 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 389 (514)
T 2gw1_A 338 IFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFD 389 (514)
T ss_dssp SHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHH
Confidence 7777777777777777777777777777777777777777777777777765
No 22
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.86 E-value=6.1e-20 Score=207.95 Aligned_cols=272 Identities=16% Similarity=0.111 Sum_probs=229.6
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--------------------------------------HcCC-------
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALK--------------------------------------EKGQ------- 35 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~--------------------------------------~~g~------- 35 (673)
++++|+..|+++++.+|++..++..++.++. ..|+
T Consensus 215 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~ 294 (597)
T 2xpi_A 215 NFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDY 294 (597)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 4789999999999999999999888865431 1111
Q ss_pred -------CCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHH
Q psy17691 36 -------PNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRV 105 (673)
Q Consensus 36 -------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~ 105 (673)
+.+...+..++..+...|++++|.. .++......|.+. ..++.++...++.. ++.
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~ 359 (597)
T 2xpi_A 295 LSSINGLEKSSDLLLCKADTLFVRSRFIDVLA-ITTKILEIDPYNLDVYPLHLASLHESGEKN--------------KLY 359 (597)
T ss_dssp HHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTTCCTTHHHHHHHHHHHTCHH--------------HHH
T ss_pred HHHhhcCCchHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHcCcccHHHHHHHHHHHHHhCCHH--------------HHH
Confidence 4678889999999999999999986 5666666666543 34455555555432 233
Q ss_pred HHH--HHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy17691 106 EIF--CYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 182 (673)
Q Consensus 106 ~~~--~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~ 182 (673)
..+ .....|++...+..+ ..+...|++++|+.+|+++++.+|++..+|..+|.+|.+.|++++|++.|+++++..|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 439 (597)
T 2xpi_A 360 LISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG 439 (597)
T ss_dssp HHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 332 335678888887655 45667999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCC-HHHH
Q psy17691 183 FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI------NPGF-ADAH 255 (673)
Q Consensus 183 ~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l------~p~~-~~a~ 255 (673)
+..++..+|.+|...|++++|++.|+++++..|+++.+|..+|.+|.+.|++++|+++|+++++. +|++ ..++
T Consensus 440 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~ 519 (597)
T 2xpi_A 440 THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATW 519 (597)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 6665 7899
Q ss_pred HHHHHHHHHcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 256 SNLASIHKDSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 256 ~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
.+++.++...|+++ ++++|+++.++..++...
T Consensus 520 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 560 (597)
T 2xpi_A 520 ANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVY 560 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 99999999999998 678899999998888543
No 23
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.86 E-value=4.4e-20 Score=176.29 Aligned_cols=141 Identities=19% Similarity=0.221 Sum_probs=122.8
Q ss_pred cCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
++|++..++..+ ..+...|++++|+..+++++...|++..++..+|.++...+++++|...++++++.+|++..++..+
T Consensus 34 ~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~l 113 (184)
T 3vtx_A 34 ADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKL 113 (184)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 456666666444 4455688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
|.++..+|++++|++.|+++++++|+++.++.++|.+|.++|++++|+.+|++|++++|+++
T Consensus 114 g~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 114 GLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 99999999999999999999999999999999999999999999999999999999988753
No 24
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.85 E-value=2.2e-20 Score=208.30 Aligned_cols=266 Identities=18% Similarity=0.210 Sum_probs=197.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---------------CCcHHHHHHHHHHHHHcCChhhhcCChhhH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ---------------PNFPDAYCNLANALKEKGQINVLHKPPYKY 65 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~---------------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~ 65 (673)
++++|+..|+++++.+|+++.++..+|.+|..+|+ |+...+++.+|.++...|++++|.... +
T Consensus 40 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~-~- 117 (537)
T 3fp2_A 40 NFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDL-S- 117 (537)
T ss_dssp CCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH-H-
T ss_pred cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHH-H-
Confidence 46899999999999999999999999999999997 888999999999999999999998633 3
Q ss_pred HhhcCCCchhhh--------------hhhhhhcCCC------------------------------------ccc--ccc
Q psy17691 66 TRELAPGNRIRI--------------GYVSSDFGNH------------------------------------PTS--HLM 93 (673)
Q Consensus 66 ~~~l~p~~~~~l--------------~~~~~~l~~~------------------------------------~~a--~~~ 93 (673)
...+.|+..... ......++.. ... ...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (537)
T 3fp2_A 118 VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLS 197 (537)
T ss_dssp HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHH
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHHHHH
Confidence 444444322100 0000000000 000 000
Q ss_pred cccC-------------CCCchhHHHHH--HHhcCCCChhH-------HHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 94 QSVP-------------GMHNKSRVEIF--CYALSPDDGTT-------FSY-IISVLLLIQVSEAEECYNTALRLCPTHA 150 (673)
Q Consensus 94 ~~~~-------------~~~~~~a~~~~--~~~l~p~~~~~-------~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~ 150 (673)
.... ......++..+ .+...|++... +.. +..+...|++++|+..|+++++.+|+ .
T Consensus 198 ~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~ 276 (537)
T 3fp2_A 198 DALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-P 276 (537)
T ss_dssp HHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-H
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-c
Confidence 0000 00122333333 33456766543 322 23445688999999999999999988 8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
.++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++.+|++..++.++|.++..
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 356 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK 356 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 231 MQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 231 ~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+|++++|+.+|+++++.+|++..++.++|.++...|+++
T Consensus 357 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 395 (537)
T 3fp2_A 357 QGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFD 395 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 999999999999999999999999999999999888876
No 25
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.85 E-value=7.8e-20 Score=203.86 Aligned_cols=270 Identities=16% Similarity=0.127 Sum_probs=175.7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH----------------------------------
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLA---------------------------------- 46 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la---------------------------------- 46 (673)
++++|+..|+++++++|++..++..+|.++..+|+++.+...+...
T Consensus 74 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~ 153 (537)
T 3fp2_A 74 DLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKD 153 (537)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC--
T ss_pred CHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999866555443200
Q ss_pred --------------------------------------------------------HHHHHcCChhhhcCChhhHHhhcC
Q psy17691 47 --------------------------------------------------------NALKEKGQINVLHKPPYKYTRELA 70 (673)
Q Consensus 47 --------------------------------------------------------~~l~~~g~~~~A~~~~~~~~~~l~ 70 (673)
......+++++|.. .++.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~-~~~~~l~~~ 232 (537)
T 3fp2_A 154 EGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTD-MYHSLLSAN 232 (537)
T ss_dssp -----CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHH-HHHHHHC--
T ss_pred ccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-HHHHHHHHC
Confidence 00001123333332 344455555
Q ss_pred CCch----------hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHHH-HHHHcCCHHHHHH
Q psy17691 71 PGNR----------IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYII-SVLLLIQVSEAEE 137 (673)
Q Consensus 71 p~~~----------~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~~-~~~~~g~~~~A~~ 137 (673)
|++. ..++.++...++. ..++..+ ....+|+ ...+..++ .+...|++++|+.
T Consensus 233 p~~~~~~~~~~~~~~~~g~~~~~~~~~--------------~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~ 297 (537)
T 3fp2_A 233 TVDDPLRENAALALCYTGIFHFLKNNL--------------LDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFK 297 (537)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCH--------------HHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHhcccH--------------HHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHH
Confidence 6542 2334444444432 2233332 3345566 44444333 3344677777777
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 138 CYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF 217 (673)
Q Consensus 138 ~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~ 217 (673)
+|+++++.+|+++.++..+|.++...|++++|+..|+++++.+|++..++.++|.++...|++++|+..|+++++.+|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 377 (537)
T 3fp2_A 298 FFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTL 377 (537)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHc----------CCCc---------ccc
Q psy17691 218 ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFAD------AHSNLASIHKDS----------GKRG---------FFI 272 (673)
Q Consensus 218 ~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~------a~~~La~~~~~~----------g~~~---------l~l 272 (673)
+.++.++|.++...|++++|+.+|++++++.|++.. .+.+++.++... |+++ +.+
T Consensus 378 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 457 (537)
T 3fp2_A 378 PEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL 457 (537)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh
Confidence 777777777777777777777777777776654432 244555666666 6555 556
Q ss_pred CCCCHHHHHHHHHH
Q psy17691 273 RTDLNSAYFWLLLL 286 (673)
Q Consensus 273 ~p~~~~a~~~l~~~ 286 (673)
+|+++.++.+++..
T Consensus 458 ~p~~~~~~~~l~~~ 471 (537)
T 3fp2_A 458 DPRSEQAKIGLAQL 471 (537)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 77777777666643
No 26
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.7e-20 Score=202.37 Aligned_cols=173 Identities=16% Similarity=0.232 Sum_probs=99.1
Q ss_pred cCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
..|++...+... ..+...|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++.++
T Consensus 299 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 378 (514)
T 2gw1_A 299 LDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFF 378 (514)
T ss_dssp TCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred cCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHH
Confidence 344444444333 3333455666666666666666665555666666666666666666666666666666555566666
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFAD------AYSNMGNTLKE---MQDIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~------~~~~lg~~~~~---~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
|.++...|++++|+..|+++++..|++.. ++.++|.++.. .|++++|+.+|+++++.+|++..++..+|.+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 458 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQM 458 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 66666666666666666666655555433 55566666666 5666666666666666666666666666666
Q ss_pred HHHcCCCc---------cccCCCCHHHHHHHH
Q psy17691 262 HKDSGKRG---------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 262 ~~~~g~~~---------l~l~p~~~~a~~~l~ 284 (673)
+...|+++ +.++|+++.++..+.
T Consensus 459 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 490 (514)
T 2gw1_A 459 KLQQEDIDEAITLFEESADLARTMEEKLQAIT 490 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 66666554 445555555544443
No 27
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.85 E-value=1.8e-20 Score=199.03 Aligned_cols=215 Identities=18% Similarity=0.263 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCC
Q psy17691 40 DAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSP 114 (673)
Q Consensus 40 ~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p 114 (673)
..++.+|..+...|++++|.. .++.+....|.+. ..++.++...++. .+++..+ .+.++|
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~-~~~~al~~~p~~~~~~~~lg~~~~~~g~~--------------~~A~~~~~~al~~~p 130 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTIL-FMEAAILQDPGDAEAWQFLGITQAENENE--------------QAAIVALQRCLELQP 130 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHTTCH--------------HHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHCCCHHHHHH-HHHHHHHhCcCCHHHHHHHHHHHHHCCCH--------------HHHHHHHHHHHhcCC
Confidence 345555555555666555553 4444444455442 3445555554432 2233333 445678
Q ss_pred CChhHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH----------HHHHHHcCCHHHHHHHHHHHHhhCCC-
Q psy17691 115 DDGTTFSYII-SVLLLIQVSEAEECYNTALRLCPTHADSLNNL----------ANIKREQGYIEEATRLYLKALEVFPE- 182 (673)
Q Consensus 115 ~~~~~~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~L----------g~~~~~~g~~~eA~~~~~~al~~~p~- 182 (673)
++..++..++ .+...|++++|+.+|+++++++|++..++..+ |.++...|++++|+.+|+++++.+|+
T Consensus 131 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 210 (365)
T 4eqf_A 131 NNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDM 210 (365)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSS
T ss_pred CCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCc
Confidence 8888875554 45569999999999999999998876666554 89999999999999999999999999
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 183 -FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 183 -~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
++.++.++|.++...|++++|++.|+++++.+|+++.+|.++|.+|..+|++++|+.+|+++++++|++..++.++|.+
T Consensus 211 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 211 IDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCc
Q psy17691 262 HKDSGKRG 269 (673)
Q Consensus 262 ~~~~g~~~ 269 (673)
+...|+++
T Consensus 291 ~~~~g~~~ 298 (365)
T 4eqf_A 291 CINLGAYR 298 (365)
T ss_dssp HHHHTCCH
T ss_pred HHHCCCHH
Confidence 99999987
No 28
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=9.1e-20 Score=182.29 Aligned_cols=229 Identities=19% Similarity=0.157 Sum_probs=167.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
++++|+..|+++++.+ +++.++..+|.++...|+++.+..++..+.........+. . ..+.....++.+
T Consensus 20 ~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~------~----~~~~~~~~l~~~ 88 (258)
T 3uq3_A 20 QFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADY------K----VISKSFARIGNA 88 (258)
T ss_dssp CHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH------H----HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccch------H----HHHHHHHHHHHH
Confidence 5789999999999999 9999999999999999985555444444433322110000 0 000001222333
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLAN 158 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~ 158 (673)
+...++.. +++..+ ...+.|+ ...+...|++++|+..++++++.+|++..++..+|.
T Consensus 89 ~~~~~~~~--------------~A~~~~~~a~~~~~~-------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 147 (258)
T 3uq3_A 89 YHKLGDLK--------------KTIEYYQKSLTEHRT-------ADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGK 147 (258)
T ss_dssp HHHTTCHH--------------HHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHcccHH--------------HHHHHHHHHHhcCch-------hHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHH
Confidence 33333211 112211 1222333 223455678888888888888888888888999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q psy17691 159 IKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGAL 238 (673)
Q Consensus 159 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~ 238 (673)
++...|++++|+.+|+++++.+|.+..++.++|.++...|++++|+..|+++++.+|+++.++..+|.++..+|++++|+
T Consensus 148 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~ 227 (258)
T 3uq3_A 148 EYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL 227 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999998999999999999999999999
Q ss_pred HHHHHHHHhC------CCCHHHHHHHHHH
Q psy17691 239 QCYSRAIQIN------PGFADAHSNLASI 261 (673)
Q Consensus 239 ~~~~~Al~l~------p~~~~a~~~La~~ 261 (673)
.+|+++++++ |++..++..++.+
T Consensus 228 ~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 228 ETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 9999999888 8888887777654
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.84 E-value=9.8e-20 Score=173.85 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=151.8
Q ss_pred ChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy17691 116 DGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVL 194 (673)
Q Consensus 116 ~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~ 194 (673)
....|.. +..+...|++++|+.+|+++++++|+++.++..+|.+|..+|++++|+..+++++...|++..++..+|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 4455654 455667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-----
Q psy17691 195 QQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG----- 269 (673)
Q Consensus 195 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~----- 269 (673)
...+++++|+..++++++++|++..++..+|.++..+|++++|+++|+++++++|++..++.++|.+|..+|+++
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ----cccCCCC
Q psy17691 270 ----FFIRTDL 276 (673)
Q Consensus 270 ----l~l~p~~ 276 (673)
++++|++
T Consensus 164 ~~~al~~~p~~ 174 (184)
T 3vtx_A 164 FKKALEKEEKK 174 (184)
T ss_dssp HHHHHHTTHHH
T ss_pred HHHHHhCCccC
Confidence 6677764
No 30
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.84 E-value=1e-19 Score=180.66 Aligned_cols=142 Identities=21% Similarity=0.229 Sum_probs=94.5
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q psy17691 124 ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDA 203 (673)
Q Consensus 124 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA 203 (673)
..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..+|.++...|++++|
T Consensus 99 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 178 (243)
T 2q7f_A 99 NVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEA 178 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHH
Confidence 33445666777777777777776666666777777777777777777777777777776666677777777777777777
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 204 LLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 204 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~ 265 (673)
+..++++++.+|++..++..+|.++..+|++++|+.+|+++++++|++..++..++.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~~~~ 240 (243)
T 2q7f_A 179 LSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLLGHHH 240 (243)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC-----
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHHHhhc
Confidence 77777777776666666777777777777777777777777777777666666665554433
No 31
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.84 E-value=4.9e-20 Score=186.65 Aligned_cols=223 Identities=14% Similarity=0.066 Sum_probs=168.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
++++|+..|+++++.+|++..++..+|.++...|+++.+..++..+.. ...
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~---~~~-------------------------- 68 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS---KVN-------------------------- 68 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT---TSC--------------------------
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh---ccC--------------------------
Confidence 578999999999999999999999999999999976555544443322 000
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHHHHhcCCC-ChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPD-DGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLAN 158 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~-~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~ 158 (673)
++. ...++ ..+..+...|++++|+.+|+++++.+|++..++..+|.
T Consensus 69 --------------------------------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 116 (272)
T 3u4t_A 69 --------------------------------ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGS 116 (272)
T ss_dssp --------------------------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred --------------------------------chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 001 12223 33445556788888888888888888888888888888
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---HH
Q psy17691 159 IKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQD---IQ 235 (673)
Q Consensus 159 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~---~~ 235 (673)
++...|++++|+.+|+++++.+|.+..+++++|...+..+++++|++.|+++++.+|++..++..+|.++..+|+ ++
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 196 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQG 196 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhH
Confidence 888888888888888888888888888888888445555688888888888888888888888888888888887 77
Q ss_pred HHHHHHHHHHHhC---CC-----CHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHHH
Q psy17691 236 GALQCYSRAIQIN---PG-----FADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 236 eA~~~~~~Al~l~---p~-----~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~ 284 (673)
+|+..|++++++. |+ ...++..+|.++...|+++ ++++|+++.++-.++
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~ 262 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLK 262 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHHhh
Confidence 7888888888775 43 2357777888888888876 667888887765554
No 32
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.84 E-value=1.7e-19 Score=198.20 Aligned_cols=256 Identities=18% Similarity=0.177 Sum_probs=183.3
Q ss_pred CHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHcCCCC-----------------------cHHHHHHHHHH
Q psy17691 1 LIDLAIDTYRRAIEL---------QPNFPDAYCNLANALKEKGQPN-----------------------FPDAYCNLANA 48 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l---------~P~~~~a~~~Lg~~~~~~g~~~-----------------------~a~a~~~la~~ 48 (673)
++++|+++|++|+++ +|....+|.++|.+|..+|+.+ .+..+..+|.+
T Consensus 66 ~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~ 145 (472)
T 4g1t_A 66 QNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWT 145 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHH
Confidence 579999999999987 7888999999999999999843 34555556666
Q ss_pred HHHcC--ChhhhcCChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHH
Q psy17691 49 LKEKG--QINVLHKPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFS 121 (673)
Q Consensus 49 l~~~g--~~~~A~~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~ 121 (673)
+...+ ++++|.. ++++++.+.|++. ..++.+...++... ....+++.+ ++.++|++..++.
T Consensus 146 ~~~~~~~~y~~A~~-~~~kal~~~p~~~~~~~~~~~~~~~l~~~~-----------~~~~al~~~~~al~l~p~~~~~~~ 213 (472)
T 4g1t_A 146 RLKCGGNQNERAKV-CFEKALEKKPKNPEFTSGLAIASYRLDNWP-----------PSQNAIDPLRQAIRLNPDNQYLKV 213 (472)
T ss_dssp HHHHCTTHHHHHHH-HHHHHHHHSTTCHHHHHHHHHHHHHHHHSC-----------CCCCTHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHccccHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHHhcCch-----------HHHHHHHHHHHHhhcCCcchHHHH
Confidence 65543 5778875 7888889999875 23343332222111 112233333 4567788877775
Q ss_pred HHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy17691 122 YIISVL-----LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ 196 (673)
Q Consensus 122 ~~~~~~-----~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~ 196 (673)
.++..+ ..+++++|+.+|+++++.+|++..++.++|.+|...|++++|+..|+++++.+|++..++.++|.+|..
T Consensus 214 ~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp HHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 554332 246788888888888888888888888888888888888888888888888888888888888887754
Q ss_pred c-------------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---H
Q psy17691 197 Q-------------------GKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFAD---A 254 (673)
Q Consensus 197 ~-------------------g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~---a 254 (673)
+ +.+++|+..|+++++++|.+..++.++|.++..+|++++|+.+|++++++++++.. .
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~ 373 (472)
T 4g1t_A 294 KVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLL 373 (472)
T ss_dssp HHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHH
Confidence 3 33677888888888888888888888888888888888888888888888776543 3
Q ss_pred HHHHHHHH-HHcCCC
Q psy17691 255 HSNLASIH-KDSGKR 268 (673)
Q Consensus 255 ~~~La~~~-~~~g~~ 268 (673)
+.+++.+. ...|++
T Consensus 374 ~~~~~~~~~~~~~~~ 388 (472)
T 4g1t_A 374 HLRYGNFQLYQMKCE 388 (472)
T ss_dssp HHHHHHHHHHTSSCH
T ss_pred HHHHHHHHHHHCCCH
Confidence 45555443 344544
No 33
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.84 E-value=3.2e-19 Score=184.72 Aligned_cols=230 Identities=12% Similarity=0.007 Sum_probs=182.6
Q ss_pred CHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCCCcHH------------HHHHHHHHHHHcCChhhhcCChhhHHh
Q psy17691 1 LIDLAIDTYRRAIELQPNF-PDAYCNLANALKEKGQPNFPD------------AYCNLANALKEKGQINVLHKPPYKYTR 67 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~-~~a~~~Lg~~~~~~g~~~~a~------------a~~~la~~l~~~g~~~~A~~~~~~~~~ 67 (673)
+|++|+..+++....+|++ .++...++.+|..+|+++.+. ++..++..+...++.+
T Consensus 14 ~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~~~~~~~a~~~la~~~~~~~~~~----------- 82 (291)
T 3mkr_A 14 SYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASHSRRD----------- 82 (291)
T ss_dssp CHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTTSCHHHHHHHHHHHHHHCSTTHH-----------
T ss_pred HHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcccCChhHHHHHHHHHHHcCCCcHH-----------
Confidence 4788898888888888877 468888889999888633222 2222333333222222
Q ss_pred hcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHH--h--cCCCChhHHHHH-HHHHHcCCHHHHHHHHHHH
Q psy17691 68 ELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCY--A--LSPDDGTTFSYI-ISVLLLIQVSEAEECYNTA 142 (673)
Q Consensus 68 ~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~--~--l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~a 142 (673)
.++..+.. . .+|++...+..+ ..+...|++++|+.+|++
T Consensus 83 -----------------------------------~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~- 126 (291)
T 3mkr_A 83 -----------------------------------AIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ- 126 (291)
T ss_dssp -----------------------------------HHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-
T ss_pred -----------------------------------HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-
Confidence 23333321 2 358888887655 455679999999999998
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy17691 143 LRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLA--SVLQQQGKLTDALLHYKEAIRIQPSFADA 220 (673)
Q Consensus 143 l~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la--~~~~~~g~~~eA~~~~~~al~~~p~~~~~ 220 (673)
|++.+++..+|.++.++|++++|++.|+++++.+|++.......+ .++...|++++|+..|+++++.+|+++.+
T Consensus 127 ----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~ 202 (291)
T 3mkr_A 127 ----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLL 202 (291)
T ss_dssp ----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHH
T ss_pred ----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHH
Confidence 899999999999999999999999999999999999865444333 33445589999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc----------cccCCCCHHHHH
Q psy17691 221 YSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG----------FFIRTDLNSAYF 281 (673)
Q Consensus 221 ~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~----------l~l~p~~~~a~~ 281 (673)
++++|.++.++|++++|+..|+++++++|++++++.++|.++...|+.. ++++|+++.+.-
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 9999999999999999999999999999999999999999999999985 568899887653
No 34
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.83 E-value=7.6e-20 Score=202.71 Aligned_cols=204 Identities=16% Similarity=0.142 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC-CcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 2 IDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQP-NFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~-~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
+++|+..++++....|+++.+++.+|.++...|++ +.+..++..+
T Consensus 84 ~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~a---------------------------------- 129 (474)
T 4abn_A 84 MEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKA---------------------------------- 129 (474)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHH----------------------------------
T ss_pred HHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHH----------------------------------
Confidence 45666677777777777777777777777777755 4444443332
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANI 159 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~ 159 (673)
+.++|++..+|..+ ..++..|++++|+.+|+++++++|+ ..++.++|.+
T Consensus 130 -----------------------------l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~ 179 (474)
T 4abn_A 130 -----------------------------VKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMV 179 (474)
T ss_dssp -----------------------------HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHH
T ss_pred -----------------------------HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHH
Confidence 23456777777555 4556799999999999999999999 7999999999
Q ss_pred HHHc---------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHH
Q psy17691 160 KREQ---------GYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQ--------GKLTDALLHYKEAIRIQP---SFAD 219 (673)
Q Consensus 160 ~~~~---------g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~--------g~~~eA~~~~~~al~~~p---~~~~ 219 (673)
+..+ |++++|+.+|+++++++|++..+|+++|.+|..+ |++++|+++|+++++++| +++.
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 259 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPD 259 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHH
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHH
Confidence 9999 9999999999999999999999999999999999 999999999999999999 9999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+|+++|.+|..+|++++|+++|+++++++|++..++.+++.++..+|+++
T Consensus 260 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 260 LHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765
No 35
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.82 E-value=1.1e-18 Score=173.01 Aligned_cols=176 Identities=21% Similarity=0.180 Sum_probs=163.0
Q ss_pred cCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
..|++...+... ..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+..++++++.+|.+..++..+
T Consensus 52 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 131 (243)
T 2q7f_A 52 ENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYML 131 (243)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 456666666444 5566799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG- 269 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~- 269 (673)
|.++...|++++|+..++++++..|++..++..+|.++...|++++|+.+|+++++.+|++..++..+|.++...|+++
T Consensus 132 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 211 (243)
T 2q7f_A 132 GTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREK 211 (243)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --------cccCCCCHHHHHHHHHHh
Q psy17691 270 --------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 270 --------l~l~p~~~~a~~~l~~~~ 287 (673)
++++|+++.++..++.+.
T Consensus 212 A~~~~~~~~~~~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 212 ALEMLDKAIDIQPDHMLALHAKKLLG 237 (243)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHTC--
T ss_pred HHHHHHHHHccCcchHHHHHHHHHHH
Confidence 678999999988876443
No 36
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.82 E-value=4.7e-19 Score=175.38 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=159.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhhcCCCcccccccc
Q psy17691 16 QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSDFGNHPTSHLMQS 95 (673)
Q Consensus 16 ~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~ 95 (673)
.+.++.+++.+|.++...|+++.+..++..+..
T Consensus 3 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------------------------------------- 35 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNAKNYAVAFEKYSEYLK----------------------------------------------- 35 (228)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------------------------------------------
T ss_pred cccCHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----------------------------------------------
Confidence 466789999999999999976555555544332
Q ss_pred cCCCCchhHHHHHHHhcCC-CChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 96 VPGMHNKSRVEIFCYALSP-DDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLY 173 (673)
Q Consensus 96 ~~~~~~~~a~~~~~~~l~p-~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~ 173 (673)
+.| .+...+ ..+.++...|++++|+.+|+++++.+|++..++..+|.++..+|++++|+..|
T Consensus 36 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 36 ----------------LTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATL 99 (228)
T ss_dssp ----------------HTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ----------------ccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 222 333343 44556677999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCH----------
Q psy17691 174 LKALEVFPEFA-------AAHSNLASVLQQQGKLTDALLHYKEAIRIQPS--FADAYSNMGNTLKEMQDI---------- 234 (673)
Q Consensus 174 ~~al~~~p~~~-------~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~---------- 234 (673)
+++++++|++. .++.++|.++...|++++|++.|+++++++|+ ++.++.++|.+|..+|+.
T Consensus 100 ~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~ 179 (228)
T 4i17_A 100 TEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLAS 179 (228)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999998 67999999999999999999999999999999 999999999999999988
Q ss_pred -----------------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 235 -----------------QGALQCYSRAIQINPGFADAHSNLASIHK 263 (673)
Q Consensus 235 -----------------~eA~~~~~~Al~l~p~~~~a~~~La~~~~ 263 (673)
++|+.+|+++++++|++..+...++.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 180 SNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999998887754
No 37
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.82 E-value=1.8e-19 Score=208.51 Aligned_cols=139 Identities=29% Similarity=0.484 Sum_probs=131.0
Q ss_pred hcCCCChhHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q psy17691 111 ALSPDDGTTFSYII-SVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSN 189 (673)
Q Consensus 111 ~l~p~~~~~~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 189 (673)
+++|++..++..++ .+..+|++++|+.+|+++++++|+++.+++++|.+|.++|++++|+++|+++++++|++..++++
T Consensus 37 ~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~ 116 (723)
T 4gyw_A 37 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 116 (723)
T ss_dssp HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 45678888886554 55569999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP 249 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p 249 (673)
+|.+|..+|++++|++.|+++++++|+++.++.++|.+|..+|++++|++.|++++++.|
T Consensus 117 Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 117 LASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhCh
Confidence 999999999999999999999999999999999999999999999999999999998754
No 38
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.81 E-value=2.2e-18 Score=172.49 Aligned_cols=205 Identities=20% Similarity=0.135 Sum_probs=167.7
Q ss_pred HhCCCC-HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhhcCCCccccc
Q psy17691 14 ELQPNF-PDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSDFGNHPTSHL 92 (673)
Q Consensus 14 ~l~P~~-~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~l~~~~~a~~ 92 (673)
+.+|.+ +.+++.+|.++...|+++.+..++..+..
T Consensus 30 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-------------------------------------------- 65 (252)
T 2ho1_A 30 DKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALE-------------------------------------------- 65 (252)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHH--------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHh--------------------------------------------
Confidence 456776 88999999999999977766665544332
Q ss_pred ccccCCCCchhHHHHHHHhcCCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 93 MQSVPGMHNKSRVEIFCYALSPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATR 171 (673)
Q Consensus 93 ~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~ 171 (673)
..|+...++.. +..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+.
T Consensus 66 -------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 126 (252)
T 2ho1_A 66 -------------------IDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQ 126 (252)
T ss_dssp -------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred -------------------cCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHH
Confidence 23444455543 4455668899999999999999999888899999999999999999999
Q ss_pred HHHHHHh--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 172 LYLKALE--VFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP 249 (673)
Q Consensus 172 ~~~~al~--~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p 249 (673)
+++++++ ..|.+..++.++|.++...|++++|+++|+++++..|++..++..+|.++..+|++++|+.+|+++++..|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 206 (252)
T 2ho1_A 127 RLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGG 206 (252)
T ss_dssp HHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 9999988 77888888999999999999999999999999999998888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHH
Q psy17691 250 GFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYF 281 (673)
Q Consensus 250 ~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~ 281 (673)
++..++..++.++...|+++ +++.|+++.+..
T Consensus 207 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 247 (252)
T 2ho1_A 207 QNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQE 247 (252)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 88888888999988888887 566777776543
No 39
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.81 E-value=3.8e-18 Score=166.67 Aligned_cols=170 Identities=19% Similarity=0.104 Sum_probs=139.8
Q ss_pred CCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCCHHHHH
Q psy17691 113 SPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQ-GYIEEATRLYLKALE--VFPEFAAAHS 188 (673)
Q Consensus 113 ~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~-g~~~eA~~~~~~al~--~~p~~~~~~~ 188 (673)
.|++...+.. +..+...|++++|+.+|+++++.+|++..++..+|.++... |++++|+..++++++ ..|.+..++.
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 3444555543 34455688899999999999988888888888899999888 899999999999888 6666688888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCC
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP-GFADAHSNLASIHKDSGK 267 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p-~~~~a~~~La~~~~~~g~ 267 (673)
++|.++...|++++|+..++++++..|++..++..+|.++...|++++|+.+|+++++..| ++...+..++.++...|+
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGN 197 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCc
Confidence 8999999999999999999999988888888888999999999999999999999988888 888888888888888888
Q ss_pred Cc---------cccCCCCHHHHHH
Q psy17691 268 RG---------FFIRTDLNSAYFW 282 (673)
Q Consensus 268 ~~---------l~l~p~~~~a~~~ 282 (673)
.+ +...|+++.+...
T Consensus 198 ~~~a~~~~~~~~~~~p~~~~~~~~ 221 (225)
T 2vq2_A 198 AQAAYEYEAQLQANFPYSEELQTV 221 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHH
Confidence 76 3467777766543
No 40
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.80 E-value=8e-20 Score=169.65 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=134.2
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHY 207 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~ 207 (673)
..|++++|+..+++++..+|+++.+++.+|.+|.+.|++++|+++|+++++++|+++.+|+++|.++...|++++|+.+|
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~ 88 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECY 88 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 208 KEAIRIQPSFADAYSNMGNTLKEMQDIQGALQC-YSRAIQINPGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 208 ~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~-~~~Al~l~p~~~~a~~~La~~~~~~g~ 267 (673)
+++++++|+++.++.++|.+|.++|++++|... +++|++++|+++.++..++.++...|+
T Consensus 89 ~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 89 RRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999887765 599999999999999999999988875
No 41
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.80 E-value=1.5e-18 Score=171.71 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=144.4
Q ss_pred ChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy17691 116 DGTTF-SYIISVLLLIQVSEAEECYNTALRLCP-THADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASV 193 (673)
Q Consensus 116 ~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~ 193 (673)
++..+ ..+..++..|++++|+..|+++++++| .+..+++++|.++...|++++|+.+|+++++.+|++..++.++|.+
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 44555 555667789999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFA-------DAYSNMGNTLKEMQDIQGALQCYSRAIQINPG--FADAHSNLASIHKD 264 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~-------~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~--~~~a~~~La~~~~~ 264 (673)
+..+|++++|+..|+++++++|+++ .++.++|.++..+|++++|+.+|+++++++|+ +..++.++|.++..
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYN 165 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Confidence 9999999999999999999999998 67999999999999999999999999999999 99999999999998
Q ss_pred cCCC
Q psy17691 265 SGKR 268 (673)
Q Consensus 265 ~g~~ 268 (673)
.|+.
T Consensus 166 ~~~~ 169 (228)
T 4i17_A 166 NGAD 169 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8877
No 42
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.80 E-value=8.7e-18 Score=174.96 Aligned_cols=212 Identities=12% Similarity=0.118 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCCh-------hhhcCChhhHHhhcCCCchh
Q psy17691 3 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQI-------NVLHKPPYKYTRELAPGNRI 75 (673)
Q Consensus 3 ~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~-------~~A~~~~~~~~~~l~p~~~~ 75 (673)
++|+..|+++++.+|+++++|+.+|..+...++ .+...|+. ++|.. .++.+...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~------------~l~~~g~~~~~~~~~~~A~~-~~~rAl~~------ 93 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSK------------LLAEKGDMNNAKLFSDEAAN-IYERAIST------ 93 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------------HHHHTSCCHHHHHHHHHHHH-HHHHHHTT------
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhch------------hhhhccchhhcccchHHHHH-HHHHHHHH------
Confidence 689999999999999999999999999876531 12223332 33322 23333330
Q ss_pred hhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHH-HH
Q psy17691 76 RIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYII-SVLLLIQVSEAEECYNTALRLCPTHAD-SL 153 (673)
Q Consensus 76 ~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~~~-a~ 153 (673)
++|++..+|...+ .+...|++++|+..|++++++.|+++. +|
T Consensus 94 ------------------------------------~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 137 (308)
T 2ond_A 94 ------------------------------------LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVY 137 (308)
T ss_dssp ------------------------------------TTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHH
T ss_pred ------------------------------------hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHH
Confidence 2344444443322 223355555555555555555555544 55
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 154 NNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ-QGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ 232 (673)
Q Consensus 154 ~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g 232 (673)
..+|.++.+.|++++|...|+++++.+|.+..+|...+.+... .|++++|++.|+++++.+|+++.+|.++|.++.++|
T Consensus 138 ~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g 217 (308)
T 2ond_A 138 IQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLN 217 (308)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 5555555555555555555555555555554444444433322 455555555555555555555555555555555555
Q ss_pred CHHHHHHHHHHHHHh---CC-CCHHHHHHHHHHHHHcCCCc
Q psy17691 233 DIQGALQCYSRAIQI---NP-GFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 233 ~~~eA~~~~~~Al~l---~p-~~~~a~~~La~~~~~~g~~~ 269 (673)
++++|+..|+++++. .| +...+|..++..+...|+.+
T Consensus 218 ~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~ 258 (308)
T 2ond_A 218 EDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLA 258 (308)
T ss_dssp CHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 555555555555553 33 24445555555555555443
No 43
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.7e-18 Score=169.15 Aligned_cols=159 Identities=19% Similarity=0.174 Sum_probs=123.9
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh--------------------
Q psy17691 126 VLLLIQVSEAEECYNTALRLCPTH-------ADSLNNLANIKREQGYIEEATRLYLKALE-------------------- 178 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~~p~~-------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~-------------------- 178 (673)
+...|++++|+.+++++++.+|++ ..++..+|.++...|++++|+.+|+++++
T Consensus 48 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~ 127 (258)
T 3uq3_A 48 EYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKK 127 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHH
Confidence 334555555555555555554443 44555555555555555555555555555
Q ss_pred ------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 179 ------VFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 179 ------~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
.+|.+..++..+|.++...|++++|+..|+++++.+|+++.++.++|.++..+|++++|+.+|+++++.+|++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 128 AEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHH
Confidence 77888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCc---------cccC------CCCHHHHHHHH
Q psy17691 253 DAHSNLASIHKDSGKRG---------FFIR------TDLNSAYFWLL 284 (673)
Q Consensus 253 ~a~~~La~~~~~~g~~~---------l~l~------p~~~~a~~~l~ 284 (673)
.++..+|.++...|+++ ++++ |++..++..+.
T Consensus 208 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~ 254 (258)
T 3uq3_A 208 RAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYY 254 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHH
Confidence 99999999999999987 4555 66666555443
No 44
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.79 E-value=1.7e-18 Score=155.72 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=115.9
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy17691 141 TALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADA 220 (673)
Q Consensus 141 ~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~ 220 (673)
++..++|+.++++.++|..++++|+|++|+++|+++++++|.++.+|+++|.++..+|++++|+..|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 44568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 221 YSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 221 ~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
|.++|.++..+|++++|+.+|+++++++|++.+++.+|+.++
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999998874
No 45
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.78 E-value=9e-18 Score=173.96 Aligned_cols=178 Identities=21% Similarity=0.261 Sum_probs=154.9
Q ss_pred HhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH--------------HH-HHHHcCCHHHHHHHH
Q psy17691 110 YALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNL--------------AN-IKREQGYIEEATRLY 173 (673)
Q Consensus 110 ~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~L--------------g~-~~~~~g~~~eA~~~~ 173 (673)
+...|++...+..+ ..+...|++++|+..|+++++.+|++...+..+ +. ++...|++++|+..+
T Consensus 82 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 161 (327)
T 3cv0_A 82 RMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLL 161 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHH
T ss_pred HhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHH
Confidence 44577777777554 455679999999999999999999998887777 66 688899999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 174 LKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFAD 253 (673)
Q Consensus 174 ~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~ 253 (673)
+++++.+|.+..++..+|.++...|++++|+..++++++.+|++..++.++|.++...|++++|+.+|+++++.+|++..
T Consensus 162 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 241 (327)
T 3cv0_A 162 HAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVR 241 (327)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCc---------cccCCC------------CHHHHHHHHHHh
Q psy17691 254 AHSNLASIHKDSGKRG---------FFIRTD------------LNSAYFWLLLLD 287 (673)
Q Consensus 254 a~~~La~~~~~~g~~~---------l~l~p~------------~~~a~~~l~~~~ 287 (673)
++.++|.++...|+++ +.+.|+ +..++..++.+.
T Consensus 242 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 296 (327)
T 3cv0_A 242 VMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLL 296 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHH
Confidence 9999999999999987 566777 677777776543
No 46
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.78 E-value=1.9e-18 Score=189.94 Aligned_cols=258 Identities=17% Similarity=0.073 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC---C---------------CCcHHHHHHHHHHHHHcC----Chhhhc
Q psy17691 2 IDLAIDTYRRAIELQPNFPDAYCNLANALKEKG---Q---------------PNFPDAYCNLANALKEKG----QINVLH 59 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g---~---------------~~~a~a~~~la~~l~~~g----~~~~A~ 59 (673)
|++|+.+|+++++++|++++++..+|.++...+ + |+...++..+|..+...+ ++++|.
T Consensus 154 y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~ 233 (472)
T 4g1t_A 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGE 233 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 789999999999999999999999999976654 2 555666666666655543 344444
Q ss_pred CChhhHHhhcCCCch---hhhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHhcCCCChhHHHHHHHHHH------
Q psy17691 60 KPPYKYTRELAPGNR---IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYALSPDDGTTFSYIISVLL------ 128 (673)
Q Consensus 60 ~~~~~~~~~l~p~~~---~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~l~p~~~~~~~~~~~~~~------ 128 (673)
. .++.+....|... ..++.++...+... .++..+ ++...|++..++..++..+.
T Consensus 234 ~-~~~~al~~~~~~~~~~~~lg~~~~~~~~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 234 K-LVEEALEKAPGVTDVLRSAAKFYRRKDEPD--------------KAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp H-HHHHHHHHCSSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHhCccHHHHHHHHHHHHHHcCchH--------------HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHh
Confidence 3 4555666666653 34566666655432 233333 44567777777655544331
Q ss_pred --------------cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH---HHHHHH
Q psy17691 129 --------------LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAA---AHSNLA 191 (673)
Q Consensus 129 --------------~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~---~~~~la 191 (673)
.+.+++|+..|+++++.+|.+..++..+|.++...|++++|+.+|+++++++|++.. ++.++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~ 378 (472)
T 4g1t_A 299 MNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYG 378 (472)
T ss_dssp HHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 234677888888888888888888888888888888888888888888888776543 355666
Q ss_pred HHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-
Q psy17691 192 SVL-QQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG- 269 (673)
Q Consensus 192 ~~~-~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~- 269 (673)
.++ ...|++++|+..|+++++++|++...... .+.+...++++++.+|+++.++.+||.+|...|+++
T Consensus 379 ~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~----------~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~ 448 (472)
T 4g1t_A 379 NFQLYQMKCEDKAIHHFIEGVKINQKSREKEKM----------KDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQ 448 (472)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHH----------HHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHH----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 543 46678888888888888777765432221 233344556666667777778888888888877776
Q ss_pred --------cccCCCCHHHHHHHH
Q psy17691 270 --------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 270 --------l~l~p~~~~a~~~l~ 284 (673)
+++.|.+|.+..++|
T Consensus 449 A~~~y~kALe~~~~~p~a~~~~G 471 (472)
T 4g1t_A 449 ADEDSERGLESGSLIPSASSWNG 471 (472)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHhcCCCCCcHhhcCC
Confidence 667777777766654
No 47
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.77 E-value=1.5e-18 Score=201.01 Aligned_cols=138 Identities=16% Similarity=0.109 Sum_probs=131.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYK 208 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~ 208 (673)
.|++++|+..|+++++.+|++..+++++|.++..+|++++|+..|+++++++|++..+++++|.++..+|++++ ++.|+
T Consensus 446 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~ 524 (681)
T 2pzi_A 446 LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQ 524 (681)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHH
T ss_pred cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHH
Confidence 44899999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 209 EAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 209 ~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~ 267 (673)
++++++|++..+++++|.++.++|++++|+++|+++++++|++..++.+++.++...++
T Consensus 525 ~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 525 TVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC----
T ss_pred HHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999999999999999999999999999999877665
No 48
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.76 E-value=8e-18 Score=186.40 Aligned_cols=176 Identities=20% Similarity=0.209 Sum_probs=164.3
Q ss_pred hcCCCChhHHHHHHH-HHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q psy17691 111 ALSPDDGTTFSYIIS-VLLLIQV-SEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHS 188 (673)
Q Consensus 111 ~l~p~~~~~~~~~~~-~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 188 (673)
...|+....+...+. +...|++ ++|+.+|+++++++|++..+++.+|.+|..+|++++|+.+|+++++++|+ ..++.
T Consensus 96 ~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~ 174 (474)
T 4abn_A 96 GSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQ 174 (474)
T ss_dssp TTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHH
T ss_pred ccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHH
Confidence 456777777765554 5569999 99999999999999999999999999999999999999999999999999 79999
Q ss_pred HHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC--
Q psy17691 189 NLASVLQQQ---------GKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEM--------QDIQGALQCYSRAIQINP-- 249 (673)
Q Consensus 189 ~la~~~~~~---------g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~--------g~~~eA~~~~~~Al~l~p-- 249 (673)
++|.++..+ |++++|++.|+++++++|++..+|+++|.+|..+ |++++|+.+|+++++++|
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 254 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKA 254 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCc
Confidence 999999999 9999999999999999999999999999999999 999999999999999999
Q ss_pred -CCHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 250 -GFADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 250 -~~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
+++.+++++|.+|...|+++ ++++|+++.++.+++.+.
T Consensus 255 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~ 302 (474)
T 4abn_A 255 SSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLL 302 (474)
T ss_dssp GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999998 789999999998887543
No 49
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.75 E-value=2.1e-16 Score=163.45 Aligned_cols=143 Identities=10% Similarity=0.012 Sum_probs=124.5
Q ss_pred CCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 114 PDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLA--NIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 114 p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg--~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
|++..++.. +..+..+|++++|+..|+++++.+|++.......+ .++...|++++|+..|+++++.+|+++.+++++
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 445556544 45566799999999999999999999875544434 334456899999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHhCCCCHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQG-ALQCYSRAIQINPGFADAHS 256 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~e-A~~~~~~Al~l~p~~~~a~~ 256 (673)
|.++..+|++++|++.|+++++.+|++++++.++|.++..+|+.++ +.++++++++++|+++.+.-
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 9999999999999999999999999999999999999999999976 57899999999999987754
No 50
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.75 E-value=2.4e-17 Score=166.69 Aligned_cols=202 Identities=15% Similarity=0.067 Sum_probs=162.6
Q ss_pred CHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhh
Q psy17691 1 LIDLAIDTYRRAIELQPNF----PDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIR 76 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~----~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~ 76 (673)
++++|+..|+++++ .|.+ ..++..+|.++...|+++.+..++..+.
T Consensus 52 ~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~----------------------------- 101 (272)
T 3u4t_A 52 KYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAV----------------------------- 101 (272)
T ss_dssp CHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------------------------
T ss_pred hHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHH-----------------------------
Confidence 47899999999999 4443 3447777777777775444444333322
Q ss_pred hhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 77 IGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNN 155 (673)
Q Consensus 77 l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 155 (673)
..+|++..++..+ ..+...|++++|+.+|+++++.+|++..++..
T Consensus 102 ----------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 147 (272)
T 3u4t_A 102 ----------------------------------DRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYE 147 (272)
T ss_dssp ----------------------------------HHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHH
T ss_pred ----------------------------------hcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHH
Confidence 2345555666444 55667999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhC---CC-----CHHHHHHH
Q psy17691 156 LANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGK---LTDALLHYKEAIRIQ---PS-----FADAYSNM 224 (673)
Q Consensus 156 Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~---~~eA~~~~~~al~~~---p~-----~~~~~~~l 224 (673)
+|......+++++|+..|+++++.+|++..++..+|.++...|+ +++|+..|+++++.. |+ ...++..+
T Consensus 148 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 227 (272)
T 3u4t_A 148 LGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYI 227 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99555566799999999999999999999999999999999999 999999999999986 44 23689999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 225 GNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 225 g~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
|.+|..+|++++|+++|+++++++|++..++..++.+....+
T Consensus 228 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~~ 269 (272)
T 3u4t_A 228 AYYYTINRDKVKADAAWKNILALDPTNKKAIDGLKMKLEHHH 269 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHC-------
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHHhhhhhcccc
Confidence 999999999999999999999999999999999887765443
No 51
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.74 E-value=1.1e-17 Score=193.51 Aligned_cols=173 Identities=15% Similarity=0.028 Sum_probs=162.4
Q ss_pred cCCCChhHHHHHHHHHHcCCHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy17691 112 LSPDDGTTFSYIISVLLLIQVSEAEECYNTAL--------RLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF 183 (673)
Q Consensus 112 l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al--------~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~ 183 (673)
.+|++...+...+ +..|++++|++.|++++ +.+|++..+++.+|.++..+|++++|+..|+++++.+|++
T Consensus 389 ~~p~~~~a~~~~a--~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 389 VDPTDVAASVLQA--TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp CCTTSTTHHHHHH--TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCcchHHhhc--ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 4667766665444 67899999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHK 263 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~ 263 (673)
..+|+++|.++..+|++++|++.|+++++++|+++.+++++|.++.++|++++ +++|+++++++|++..+++++|.++.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 264 DSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 264 ~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
.+|+++ ++++|++..++++++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999997 789999999999998664
No 52
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.74 E-value=3.7e-18 Score=182.52 Aligned_cols=268 Identities=18% Similarity=0.161 Sum_probs=198.3
Q ss_pred CHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCCC---------------------cHHHHHHHHHHHHHcCCh
Q psy17691 1 LIDLAIDTYRRAIELQPNF----PDAYCNLANALKEKGQPN---------------------FPDAYCNLANALKEKGQI 55 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~----~~a~~~Lg~~~~~~g~~~---------------------~a~a~~~la~~l~~~g~~ 55 (673)
++++|+..|+++++.+|++ ..++..+|.++...|+++ .+.++..+|.++...|++
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 103 (406)
T 3sf4_A 24 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNF 103 (406)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCH
Confidence 4789999999999999998 468999999999999732 345677889999999999
Q ss_pred hhhcCChhhHHhhcCCC---------chhhhhhhhhhcCCCcccccccccCCC------CchhHHHHHHH------hc--
Q psy17691 56 NVLHKPPYKYTRELAPG---------NRIRIGYVSSDFGNHPTSHLMQSVPGM------HNKSRVEIFCY------AL-- 112 (673)
Q Consensus 56 ~~A~~~~~~~~~~l~p~---------~~~~l~~~~~~l~~~~~a~~~~~~~~~------~~~~a~~~~~~------~l-- 112 (673)
++|.. .++.+..+.+. ....++.++...++............. ....++..+.. ..
T Consensus 104 ~~A~~-~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~ 182 (406)
T 3sf4_A 104 DEAIV-CCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGD 182 (406)
T ss_dssp HHHHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99876 44444443322 124556666555541100000000000 01222222211 11
Q ss_pred CCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--
Q psy17691 113 SPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHA------DSLNNLANIKREQGYIEEATRLYLKALEVFPEF-- 183 (673)
Q Consensus 113 ~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-- 183 (673)
.+.....+. .+..+...|++++|+.++++++++.+... .++.++|.++...|++++|+.++++++++.+..
T Consensus 183 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 262 (406)
T 3sf4_A 183 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 262 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcC
Confidence 111223343 34455679999999999999999866543 389999999999999999999999999987765
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----
Q psy17691 184 ----AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINP---- 249 (673)
Q Consensus 184 ----~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p---- 249 (673)
..++.++|.++...|++++|+.+|++++++.+.. ..++..+|.+|..+|++++|+.+|++++++.+
T Consensus 263 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 342 (406)
T 3sf4_A 263 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGD 342 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 7789999999999999999999999999985544 67899999999999999999999999999843
Q ss_pred --CCHHHHHHHHHHHHHcCCCc
Q psy17691 250 --GFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 250 --~~~~a~~~La~~~~~~g~~~ 269 (673)
....++..++.++...|+..
T Consensus 343 ~~~~~~~~~~l~~~~~~~g~~~ 364 (406)
T 3sf4_A 343 KSGELTARLNLSDLQMVLGLSY 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcchhHHHHHHHHHHHHhhHhH
Confidence 33678999999999999875
No 53
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.74 E-value=3.7e-17 Score=165.40 Aligned_cols=195 Identities=12% Similarity=0.118 Sum_probs=161.7
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhhcCCCcccc
Q psy17691 12 AIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSDFGNHPTSH 91 (673)
Q Consensus 12 AL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~l~~~~~a~ 91 (673)
..+++|+++..++.+|..+...|+++.+...+..+
T Consensus 7 ~~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~--------------------------------------------- 41 (261)
T 3qky_A 7 SGRLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAV--------------------------------------------- 41 (261)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHH---------------------------------------------
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH---------------------------------------------
Confidence 35678999999999999999999655444443322
Q ss_pred cccccCCCCchhHHHHHHHhcCCCC---hhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH--
Q psy17691 92 LMQSVPGMHNKSRVEIFCYALSPDD---GTTF-SYIISVLLLIQVSEAEECYNTALRLCPTH---ADSLNNLANIKRE-- 162 (673)
Q Consensus 92 ~~~~~~~~~~~~a~~~~~~~l~p~~---~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~Lg~~~~~-- 162 (673)
+...|++ ..++ ..+.+++..|++++|+..|+++++.+|++ ..+++.+|.++..
T Consensus 42 ------------------l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~ 103 (261)
T 3qky_A 42 ------------------FTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLS 103 (261)
T ss_dssp ------------------GGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHC
T ss_pred ------------------HHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhc
Confidence 1233444 4555 44566778999999999999999998854 6789999999999
Q ss_pred ------cCCHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCC---
Q psy17691 163 ------QGYIEEATRLYLKALEVFPEFAAAH-----------------SNLASVLQQQGKLTDALLHYKEAIRIQPS--- 216 (673)
Q Consensus 163 ------~g~~~eA~~~~~~al~~~p~~~~~~-----------------~~la~~~~~~g~~~eA~~~~~~al~~~p~--- 216 (673)
+|++++|+..|+++++.+|++..+. +++|.+|...|++++|+..|+++++..|+
T Consensus 104 ~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 183 (261)
T 3qky_A 104 PPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW 183 (261)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred ccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch
Confidence 9999999999999999999986555 88999999999999999999999999998
Q ss_pred CHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCCc
Q psy17691 217 FADAYSNMGNTLKEM----------QDIQGALQCYSRAIQINPGFA---DAHSNLASIHKDSGKRG 269 (673)
Q Consensus 217 ~~~~~~~lg~~~~~~----------g~~~eA~~~~~~Al~l~p~~~---~a~~~La~~~~~~g~~~ 269 (673)
...++..+|.+|..+ |++++|+.+|+++++..|+++ .+...++.++..+++++
T Consensus 184 ~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~ 249 (261)
T 3qky_A 184 ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 567999999999977 999999999999999999984 56777888887777654
No 54
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.74 E-value=1.5e-16 Score=155.26 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=158.8
Q ss_pred CCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy17691 113 SPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLA 191 (673)
Q Consensus 113 ~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la 191 (673)
.|++...+.. +..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..++.++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 83 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYG 83 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 4555666644 455667999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 192 SVLQQQ-GKLTDALLHYKEAIR--IQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 192 ~~~~~~-g~~~eA~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
.++... |++++|+..++++++ ..|.+..++.++|.++...|++++|+.+|+++++..|++..++..+|.++...|++
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 84 WFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 999999 999999999999999 66777899999999999999999999999999999999999999999999999999
Q ss_pred c---------cccCC-CCHHHHHHHHHH
Q psy17691 269 G---------FFIRT-DLNSAYFWLLLL 286 (673)
Q Consensus 269 ~---------l~l~p-~~~~a~~~l~~~ 286 (673)
+ +...| ++..++..++..
T Consensus 164 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (225)
T 2vq2_A 164 GDADYYFKKYQSRVEVLQADDLLLGWKI 191 (225)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 7 67788 888877655533
No 55
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.74 E-value=1.2e-17 Score=154.98 Aligned_cols=109 Identities=12% Similarity=0.074 Sum_probs=101.9
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDAL 204 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~ 204 (673)
.++..|++++|+.+|+++++++|+++.+|+.+|.+|..+|++++|+.+|+++++++|+++.+++++|.++...|++++|.
T Consensus 40 ~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa 119 (150)
T 4ga2_A 40 LYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRA 119 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHH
Confidence 33445589999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HH-HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 205 LH-YKEAIRIQPSFADAYSNMGNTLKEMQD 233 (673)
Q Consensus 205 ~~-~~~al~~~p~~~~~~~~lg~~~~~~g~ 233 (673)
+. ++++++++|+++.++..++.++..+|+
T Consensus 120 ~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 120 KYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 65 599999999999999999999998885
No 56
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.73 E-value=2.5e-17 Score=161.40 Aligned_cols=138 Identities=19% Similarity=0.144 Sum_probs=116.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--
Q psy17691 122 YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGK-- 199 (673)
Q Consensus 122 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~-- 199 (673)
.+..+...|++++|+..|+++++++|++..++.++|.++..+|++++|+.+|+++++++|++..+++++|.+|+..|+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 345566788999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 200 LTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 200 ~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
.+++...|++++...|. ..+++++|.++..+|++++|+.+|+++++++|+. .+...|..+
T Consensus 140 ~~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i 199 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKM-QYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKI 199 (208)
T ss_dssp HHHHHHHHC---CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCch-hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHH
Confidence 45677888887643332 3478889999999999999999999999999974 455555554
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.73 E-value=1.5e-16 Score=149.85 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=128.7
Q ss_pred CCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy17691 113 SPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLA 191 (673)
Q Consensus 113 ~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la 191 (673)
.|++...+.. +..+...|++++|+.+++++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..++..+|
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 117 (186)
T 3as5_A 38 DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLG 117 (186)
T ss_dssp TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHH
Confidence 3445555544 445567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFAD 253 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~ 253 (673)
.++...|++++|+..++++++..|++..++..+|.++..+|++++|+.+++++++.+|++..
T Consensus 118 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 118 VALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASV 179 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999887643
No 58
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.73 E-value=6.6e-17 Score=163.40 Aligned_cols=213 Identities=13% Similarity=0.008 Sum_probs=159.7
Q ss_pred CHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhh
Q psy17691 1 LIDLAIDTYRRAIELQ----PNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIR 76 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~----P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~ 76 (673)
++++|+..|+++++.. |+++.++..+|.++...|+++.+..++..+.
T Consensus 20 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al----------------------------- 70 (275)
T 1xnf_A 20 QQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQAL----------------------------- 70 (275)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------------------------
T ss_pred hHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHH-----------------------------
Confidence 3789999999999984 4567788888888888776444443333222
Q ss_pred hhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 77 IGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNN 155 (673)
Q Consensus 77 l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 155 (673)
..+|++..++..+ ..+...|++++|+.+|+++++.+|++..++..
T Consensus 71 ----------------------------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 116 (275)
T 1xnf_A 71 ----------------------------------AIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLN 116 (275)
T ss_dssp ----------------------------------HHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred ----------------------------------HcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHH
Confidence 2345555666444 44556888999999999999988888888889
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Q psy17691 156 LANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQ 235 (673)
Q Consensus 156 Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 235 (673)
+|.++...|++++|+.+|+++++++|++......++.. ...|++++|+..+++++...|++...+. ++.++...++.+
T Consensus 117 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 194 (275)
T 1xnf_A 117 RGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWN-IVEFYLGNISEQ 194 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHH-HHHHHTTSSCHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchHHHH-HHHHHHHhcCHH
Confidence 99999999999999999999998888887666655544 5668888898888888888887765544 666777777888
Q ss_pred HHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCCc---------cccCCCCHH
Q psy17691 236 GALQCYSRAIQINPGF----ADAHSNLASIHKDSGKRG---------FFIRTDLNS 278 (673)
Q Consensus 236 eA~~~~~~Al~l~p~~----~~a~~~La~~~~~~g~~~---------l~l~p~~~~ 278 (673)
+|+..++++++..|.. ..++.++|.++...|+++ +.++|++..
T Consensus 195 ~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 195 TLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCH
T ss_pred HHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHH
Confidence 8888888887766533 677888888888888876 566776544
No 59
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.72 E-value=2.3e-16 Score=157.75 Aligned_cols=175 Identities=17% Similarity=0.150 Sum_probs=160.4
Q ss_pred cCCCC-hhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q psy17691 112 LSPDD-GTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSN 189 (673)
Q Consensus 112 l~p~~-~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 189 (673)
.+|+. ...+. .+..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|++.++++++.+|.+..++.+
T Consensus 31 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 110 (252)
T 2ho1_A 31 KGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNN 110 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHH
Confidence 34444 44554 44556679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIR--IQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~ 267 (673)
+|.++...|++++|+++|+++++ ..|.+..++..+|.++...|++++|+.+|+++++.+|++..++..++.++...|+
T Consensus 111 la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 190 (252)
T 2ho1_A 111 YGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE 190 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999 8898999999999999999999999999999999999999999999999999999
Q ss_pred Cc---------cccCCCCHHHHHHHHHH
Q psy17691 268 RG---------FFIRTDLNSAYFWLLLL 286 (673)
Q Consensus 268 ~~---------l~l~p~~~~a~~~l~~~ 286 (673)
++ +...|++..++..++..
T Consensus 191 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 191 YVPARQYYDLFAQGGGQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 87 67889998888777644
No 60
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.72 E-value=1.4e-15 Score=154.53 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=118.2
Q ss_pred hhHHH-HHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHH
Q psy17691 117 GTTFS-YIISVLL----LIQVSEAEECYNTALRLCPTHADSLNNLANIKRE----QGYIEEATRLYLKALEVFPEFAAAH 187 (673)
Q Consensus 117 ~~~~~-~~~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~ 187 (673)
..++. .+..+.. .+++++|+.+|+++++. +++.+++++|.+|.. .+++++|+.+|+++++.. +..++
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~ 149 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGC 149 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHH
Confidence 34443 3344556 78888999999888887 478888888988888 888999999999888875 67888
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 188 SNLASVLQQ----QGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE----MQDIQGALQCYSRAIQINPGFADAHSNLA 259 (673)
Q Consensus 188 ~~la~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~Al~l~p~~~~a~~~La 259 (673)
+++|.++.. .+++++|+.+|+++++. +++.++.++|.+|.. .+++++|+.+|+++++..+ ..++.+||
T Consensus 150 ~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~ 225 (273)
T 1ouv_A 150 TILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLG 225 (273)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHH
Confidence 888888888 88889999999888887 457888888988888 8889999999988888865 78888888
Q ss_pred HHHHH----cCCCc
Q psy17691 260 SIHKD----SGKRG 269 (673)
Q Consensus 260 ~~~~~----~g~~~ 269 (673)
.+|.. .++++
T Consensus 226 ~~~~~g~~~~~~~~ 239 (273)
T 1ouv_A 226 AMQYNGEGVTRNEK 239 (273)
T ss_dssp HHHHTTSSSSCCST
T ss_pred HHHHcCCCcccCHH
Confidence 88887 67765
No 61
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.72 E-value=1.6e-17 Score=154.30 Aligned_cols=121 Identities=15% Similarity=0.051 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17691 132 VSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAI 211 (673)
Q Consensus 132 ~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al 211 (673)
+-.+-..++++++++|++..+++.+|.++.++|++++|+.+|+++++++|+++.+|+++|.++..+|++++|+.+|++++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 33344568888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 212 RIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 212 ~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
+++|+++.+|+++|.+|..+|++++|+.+|++++++.|+..
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999865
No 62
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.72 E-value=2.7e-15 Score=152.45 Aligned_cols=143 Identities=13% Similarity=0.186 Sum_probs=84.8
Q ss_pred hhHHHHHHHhcCCCChhHHHHHHHH-HH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHH
Q psy17691 102 KSRVEIFCYALSPDDGTTFSYIISV-LL----LIQVSEAEECYNTALRLCPTHADSLNNLANIKRE----QGYIEEATRL 172 (673)
Q Consensus 102 ~~a~~~~~~~l~p~~~~~~~~~~~~-~~----~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~ 172 (673)
.+++..+...+..++..++..++.. .. .+++++|+.+|+++++.+ +..++.++|.+|.. .+++++|+.+
T Consensus 95 ~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~ 172 (273)
T 1ouv_A 95 NKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALAS 172 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 3344444444434455555444333 33 566666666666666653 45566666666666 6666666666
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHH
Q psy17691 173 YLKALEVFPEFAAAHSNLASVLQQ----QGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE----MQDIQGALQCYSRA 244 (673)
Q Consensus 173 ~~~al~~~p~~~~~~~~la~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~A 244 (673)
|+++++. ++..+++++|.+|.. .+++++|+.+|+++++.++ +.++.++|.+|.. .+++++|+.+|+++
T Consensus 173 ~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a 248 (273)
T 1ouv_A 173 YDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKG 248 (273)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Confidence 6666655 345666666666666 6666666666666666544 5566666666666 66666666666666
Q ss_pred HHhCCC
Q psy17691 245 IQINPG 250 (673)
Q Consensus 245 l~l~p~ 250 (673)
+++.|+
T Consensus 249 ~~~~~~ 254 (273)
T 1ouv_A 249 CKLGAK 254 (273)
T ss_dssp HHHTCH
T ss_pred HHcCCH
Confidence 666554
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.71 E-value=2.6e-16 Score=148.32 Aligned_cols=149 Identities=16% Similarity=0.127 Sum_probs=143.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 200 (673)
..+..+...|++++|+..++++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..++.++|.++...|++
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 92 (186)
T 3as5_A 13 DKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKY 92 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCH
Confidence 34456667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
++|++.++++++.+|++..++..+|.++...|++++|+.+|+++++..|++..++..+|.++...|+++
T Consensus 93 ~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 93 DLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999876
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.71 E-value=2.4e-16 Score=159.48 Aligned_cols=169 Identities=14% Similarity=0.045 Sum_probs=149.3
Q ss_pred cCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---H
Q psy17691 112 LSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTH---ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF---A 184 (673)
Q Consensus 112 l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---~ 184 (673)
..+++...+ ..+..++..|++++|+..|+++++.+|++ ..+++.+|.++..+|++++|+..|+++++.+|++ .
T Consensus 10 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 89 (261)
T 3qky_A 10 LRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVP 89 (261)
T ss_dssp -CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhH
Confidence 456666665 55566778999999999999999999999 9999999999999999999999999999998865 6
Q ss_pred HHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHH
Q psy17691 185 AAHSNLASVLQQ--------QGKLTDALLHYKEAIRIQPSFADAY-----------------SNMGNTLKEMQDIQGALQ 239 (673)
Q Consensus 185 ~~~~~la~~~~~--------~g~~~eA~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g~~~eA~~ 239 (673)
.+++.+|.++.. +|++++|+..|+++++..|++..+. +++|.+|..+|++++|+.
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 169 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAV 169 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 789999999999 9999999999999999999986655 889999999999999999
Q ss_pred HHHHHHHhCCC---CHHHHHHHHHHHHHc----------CCCc---------cccCCCCHHHH
Q psy17691 240 CYSRAIQINPG---FADAHSNLASIHKDS----------GKRG---------FFIRTDLNSAY 280 (673)
Q Consensus 240 ~~~~Al~l~p~---~~~a~~~La~~~~~~----------g~~~---------l~l~p~~~~a~ 280 (673)
.|+++++..|+ ...+++.+|.++..+ |+++ ++..|+++.+.
T Consensus 170 ~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 232 (261)
T 3qky_A 170 TYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLR 232 (261)
T ss_dssp HHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred HHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence 99999999998 567999999999988 4444 56778876543
No 65
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.70 E-value=2.6e-16 Score=141.31 Aligned_cols=117 Identities=18% Similarity=0.132 Sum_probs=110.7
Q ss_pred cCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
++|+....+. .+..++..|++++|+.+|+++++++|+++.++.++|.+|..+|++++|+..|+++++++|++..+|+++
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 6788777774 556677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
|.++..+|++++|++.|+++++++|++.+++.+++.++
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999875
No 66
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.70 E-value=4.9e-17 Score=175.04 Aligned_cols=251 Identities=19% Similarity=0.195 Sum_probs=183.1
Q ss_pred CHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFP----DAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIR 76 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~----~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~ 76 (673)
++++|+..|+++++++|++. .++..+|.+|...|+++.+..++..+..+......... .......
T Consensus 63 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-----------~~~~~~~ 131 (411)
T 4a1s_A 63 DCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG-----------EAKSSGN 131 (411)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH-----------HHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH-----------HHHHHHH
Confidence 57899999999999999987 58999999999999876666666655544322110000 0001133
Q ss_pred hhhhhhhcCCCcccccccccCCCCchhHHHHHHHh-cCCCChhHHHH-HHHHHHcCC-----------------HHHHHH
Q psy17691 77 IGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYA-LSPDDGTTFSY-IISVLLLIQ-----------------VSEAEE 137 (673)
Q Consensus 77 l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~-l~p~~~~~~~~-~~~~~~~g~-----------------~~~A~~ 137 (673)
++.++...++...+... ...++...... ..+....++.. +..+...|+ +++|+.
T Consensus 132 l~~~~~~~g~~~~A~~~-------~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~ 204 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAIC-------CERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVE 204 (411)
T ss_dssp HHHHHHHTTCHHHHHHH-------HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHH-------HHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHH
Confidence 44555555443322111 11111111111 01223334444 445556889 999999
Q ss_pred HHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHcCCHHHHHH
Q psy17691 138 CYNTALRLC------PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA------AAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 138 ~~~~al~~~------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~------~~~~~la~~~~~~g~~~eA~~ 205 (673)
++++++++. +....++.++|.++..+|++++|+.++++++++.+... .++.++|.++..+|++++|+.
T Consensus 205 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 284 (411)
T 4a1s_A 205 FYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAE 284 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 999999874 33456899999999999999999999999999876543 389999999999999999999
Q ss_pred HHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCc
Q psy17691 206 HYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 206 ~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~La~~~~~~g~~~ 269 (673)
+|++++++.+.. ..++.++|.++..+|++++|+.+|++++++.+.. ..++.++|.++...|+++
T Consensus 285 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 360 (411)
T 4a1s_A 285 HYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHE 360 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHH
Confidence 999999987754 6789999999999999999999999999885432 458899999999999875
No 67
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.69 E-value=2.5e-16 Score=154.21 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=138.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy17691 119 TFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNN----------------LANIKREQGYIEEATRLYLKALEVFPE 182 (673)
Q Consensus 119 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~----------------Lg~~~~~~g~~~eA~~~~~~al~~~p~ 182 (673)
.+..+..++..|++++|+.+|+++++.+|+++.+++. +|.+|..+|++++|+..|+++++++|+
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 86 (208)
T 3urz_A 7 MLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN 86 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 3456677788999999999999999999999999999 999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 183 FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQD--IQGALQCYSRAIQINPGFADAHSNLAS 260 (673)
Q Consensus 183 ~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--~~eA~~~~~~Al~l~p~~~~a~~~La~ 260 (673)
+..+++++|.++...|++++|+..|+++++++|+++.+++++|.+|..+|+ ..++...|++++...|. ..+++++|.
T Consensus 87 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~g~ 165 (208)
T 3urz_A 87 NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKM-QYARYRDGL 165 (208)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCch-hHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987764 45677888887643332 347888999
Q ss_pred HHHHcCCCc---------cccCCCCH
Q psy17691 261 IHKDSGKRG---------FFIRTDLN 277 (673)
Q Consensus 261 ~~~~~g~~~---------l~l~p~~~ 277 (673)
++...|+++ ++++|+..
T Consensus 166 ~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 166 SKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 999999987 78889754
No 68
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.69 E-value=1.5e-16 Score=164.32 Aligned_cols=248 Identities=18% Similarity=0.166 Sum_probs=173.1
Q ss_pred CHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHc-CChhhhcCChhhHHhhcCCCchh
Q psy17691 1 LIDLAIDTYRRAIELQPNF----PDAYCNLANALKEKGQPNFPDAYCNLANALKEK-GQINVLHKPPYKYTRELAPGNRI 75 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~----~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~-g~~~~A~~~~~~~~~~l~p~~~~ 75 (673)
++++|+..|+++++.+|++ ..++..+|.++...|+++.+..++..+..+... ++.... .....
T Consensus 20 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~------------~~~~~ 87 (338)
T 3ro2_A 20 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE------------AKASG 87 (338)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH------------HHHHH
T ss_pred cHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH------------HHHHH
Confidence 5789999999999999999 478889999999999866665555554433221 110000 00012
Q ss_pred hhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCC---hhHHH-HHHHHHHcCC--------------------
Q psy17691 76 RIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDD---GTTFS-YIISVLLLIQ-------------------- 131 (673)
Q Consensus 76 ~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~---~~~~~-~~~~~~~~g~-------------------- 131 (673)
.++.++...++...+... ...++.... . ..+. ..++. .+..+...|+
T Consensus 88 ~l~~~~~~~g~~~~A~~~-------~~~al~~~~-~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 88 NLGNTLKVLGNFDEAIVC-------CQRHLDISR-E-LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHTTCHHHHHHH-------HHHHHHHHH-H-TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHccCHHHHHHH-------HHHHHHHHH-H-hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 334444444432222110 000111000 0 1111 22333 3344556788
Q ss_pred HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCC
Q psy17691 132 VSEAEECYNTALRL------CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLASVLQQQGK 199 (673)
Q Consensus 132 ~~~A~~~~~~al~~------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la~~~~~~g~ 199 (673)
+++|+.++++++++ .+....++..+|.++...|++++|+.++++++++.+.. ..++.++|.++...|+
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 238 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 238 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC
Confidence 99999999998886 23345688999999999999999999999999886543 3488999999999999
Q ss_pred HHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q psy17691 200 LTDALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSNLASIHKDSGK 267 (673)
Q Consensus 200 ~~eA~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~La~~~~~~g~ 267 (673)
+++|+..+++++++.+.. ..++..+|.++..+|++++|+.+|++++++.+.. ..++..+|.++...|+
T Consensus 239 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 318 (338)
T 3ro2_A 239 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGN 318 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 999999999999886655 6788999999999999999999999999875432 4578889999999998
Q ss_pred Cc
Q psy17691 268 RG 269 (673)
Q Consensus 268 ~~ 269 (673)
++
T Consensus 319 ~~ 320 (338)
T 3ro2_A 319 HD 320 (338)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 69
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.68 E-value=1.7e-14 Score=160.11 Aligned_cols=245 Identities=17% Similarity=0.124 Sum_probs=134.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCC-------------CCcHHHHHHHHHHHHH----cCChhhhc
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKE----KGQ-------------PNFPDAYCNLANALKE----KGQINVLH 59 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~----~g~-------------~~~a~a~~~la~~l~~----~g~~~~A~ 59 (673)
++++|+..|+++++. +++.+++.||.+|.. .++ ...+.+++.+|.++.. .+++++|.
T Consensus 58 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~ 135 (490)
T 2xm6_A 58 DLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESV 135 (490)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 367788888888775 677888888888887 665 4566677777887777 67777776
Q ss_pred CChhhHHhhcC-CCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHH-H----cCCHH
Q psy17691 60 KPPYKYTRELA-PGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVL-L----LIQVS 133 (673)
Q Consensus 60 ~~~~~~~~~l~-p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~-~----~g~~~ 133 (673)
. .++.+.... +.....++.++..-... .....+++..+.......+..++..++..+ . .++++
T Consensus 136 ~-~~~~a~~~~~~~a~~~Lg~~y~~g~g~----------~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~ 204 (490)
T 2xm6_A 136 K-WFRLAAEQGRDSGQQSMGDAYFEGDGV----------TRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDA 204 (490)
T ss_dssp H-HHHHHHHTTCHHHHHHHHHHHHHTSSS----------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred H-HHHHHHHCCCHHHHHHHHHHHHcCCCC----------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHH
Confidence 5 333333322 22234556555431100 011233444443333334444443333322 2 45555
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHH
Q psy17691 134 EAEECYNTALRLCPTHADSLNNLANIKRE----QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ----QGKLTDALL 205 (673)
Q Consensus 134 ~A~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~eA~~ 205 (673)
+|+.+|+++++. .++.+++.+|.+|.. .+++++|+.+|+++++. .+..+++++|.++.. .+++++|+.
T Consensus 205 ~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d~~~A~~ 280 (490)
T 2xm6_A 205 ISAQWYRKSATS--GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKEPLKALE 280 (490)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred HHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCHHHHHH
Confidence 555555555543 345555555555554 55555555555555543 345555555555555 555555555
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 206 HYKEAIRIQPSFADAYSNMGNTLKEM-----QDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 206 ~~~~al~~~p~~~~~~~~lg~~~~~~-----g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
+|+++.+. .++.+++++|.+|... +++++|+.+|+++++. ++..++++||.+|...|
T Consensus 281 ~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g 342 (490)
T 2xm6_A 281 WYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFRLG 342 (490)
T ss_dssp HHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCC
Confidence 55555443 3455555555555555 5555555555555543 34455555555555543
No 70
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.67 E-value=1.9e-16 Score=146.54 Aligned_cols=123 Identities=11% Similarity=0.014 Sum_probs=116.1
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 136 EECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQP 215 (673)
Q Consensus 136 ~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p 215 (673)
-..|+++++++|++..+++.+|.++...|++++|+..|+++++.+|+++.+|+++|.++..+|++++|+..|+++++++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 216 SFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNL 258 (673)
Q Consensus 216 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~L 258 (673)
+++.+++++|.+|..+|++++|+.+|+++++++|+++......
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 129 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELS 129 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHH
Confidence 9999999999999999999999999999999999876554333
No 71
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.67 E-value=5.1e-16 Score=160.34 Aligned_cols=145 Identities=16% Similarity=0.100 Sum_probs=118.5
Q ss_pred hHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------
Q psy17691 118 TTFSYI-ISVLLLIQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQ-GYIEEATRLYLKALEVFPEF------ 183 (673)
Q Consensus 118 ~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~-g~~~eA~~~~~~al~~~p~~------ 183 (673)
.++..+ ..+..+|++++|+.+|++++++.+.. ..++.++|.+|..+ |++++|+.+|++++++.|..
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~ 157 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALS 157 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHH
Confidence 345444 44556899999999999999997654 56899999999996 99999999999999998764
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFAD-------AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADA-- 254 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~-------~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a-- 254 (673)
..++.++|.++..+|++++|+.+|++++++.|++.. ++.++|.++..+|++++|+.+|+++++++|++...
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 237 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRE 237 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHH
Confidence 567999999999999999999999999999987643 68999999999999999999999999999987654
Q ss_pred ---HHHHHHHH
Q psy17691 255 ---HSNLASIH 262 (673)
Q Consensus 255 ---~~~La~~~ 262 (673)
+..++..+
T Consensus 238 ~~~l~~l~~~~ 248 (292)
T 1qqe_A 238 SNFLKSLIDAV 248 (292)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455554
No 72
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.67 E-value=1.2e-15 Score=154.04 Aligned_cols=201 Identities=13% Similarity=0.059 Sum_probs=163.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
++++|+..|+++++.+|+++.++..+|.++...|+++.+..++..+..
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-------------------------------- 105 (275)
T 1xnf_A 58 LRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLE-------------------------------- 105 (275)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--------------------------------
T ss_pred cHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHh--------------------------------
Confidence 578999999999999999999999999999999865555444433322
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANI 159 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~ 159 (673)
..|++..++.. +..+...|++++|+.+|+++++.+|++......++..
T Consensus 106 -------------------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 106 -------------------------------LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp -------------------------------HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred -------------------------------cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 34555555544 4556679999999999999999999998777666644
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHcCCHH
Q psy17691 160 KREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS----FADAYSNMGNTLKEMQDIQ 235 (673)
Q Consensus 160 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~----~~~~~~~lg~~~~~~g~~~ 235 (673)
...|++++|+..+++++...|.+...+. ++.++...++.++|+..++++++..|. +..++..+|.++..+|+++
T Consensus 155 -~~~~~~~~A~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 232 (275)
T 1xnf_A 155 -EQKLDEKQAKEVLKQHFEKSDKEQWGWN-IVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLD 232 (275)
T ss_dssp -HHHHCHHHHHHHHHHHHHHSCCCSTHHH-HHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -HHhcCHHHHHHHHHHHHhcCCcchHHHH-HHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHH
Confidence 6679999999999999999998866654 777888889999999999999887764 3789999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 236 GALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 236 eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+|+.+|+++++++|++...+ +.++..+|+++
T Consensus 233 ~A~~~~~~al~~~p~~~~~~---~~~~~~l~~~~ 263 (275)
T 1xnf_A 233 SATALFKLAVANNVHNFVEH---RYALLELSLLG 263 (275)
T ss_dssp HHHHHHHHHHTTCCTTCHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHH---HHHHHHHHHHH
Confidence 99999999999999775543 44555555543
No 73
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.66 E-value=5.3e-16 Score=175.53 Aligned_cols=156 Identities=16% Similarity=0.137 Sum_probs=129.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYK 208 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~ 208 (673)
.|++++|+..|+++++.+|++..++..+|.++..+|++++|++.|+++++++|++..++.++|.++..+|++++|+++|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc---CCCc---------cccCCCC
Q psy17691 209 EAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS---GKRG---------FFIRTDL 276 (673)
Q Consensus 209 ~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~---g~~~---------l~l~p~~ 276 (673)
++++++|++..++.++|.+|..+|++++|+++|+++++++|++..++.+++.++... |+++ ++.+|++
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999 7765 5677776
Q ss_pred HHHHHHHH
Q psy17691 277 NSAYFWLL 284 (673)
Q Consensus 277 ~~a~~~l~ 284 (673)
...+..++
T Consensus 162 ~~~~~~l~ 169 (568)
T 2vsy_A 162 VEPFAFLS 169 (568)
T ss_dssp SCHHHHTT
T ss_pred cChHHHhC
Confidence 66655544
No 74
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.66 E-value=4.3e-15 Score=154.52 Aligned_cols=216 Identities=12% Similarity=0.046 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 2 IDLAIDTYRRAIE-LQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 2 ~~eAi~~~~kAL~-l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
+++|+..|++|++ ++|++..+|..+|.++...|+.+.+...+..+
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a---------------------------------- 125 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRL---------------------------------- 125 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH----------------------------------
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHH----------------------------------
Confidence 4899999999999 79999999999999999888644443333222
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChh-HHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGT-TFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLAN 158 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~-~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~ 158 (673)
+.+.|++.. +|.. +..+...|++++|+..|+++++..|.+..++...+.
T Consensus 126 -----------------------------l~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~ 176 (308)
T 2ond_A 126 -----------------------------LAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAAL 176 (308)
T ss_dssp -----------------------------HTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHH
T ss_pred -----------------------------HhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 123455544 5544 444556899999999999999999999888887777
Q ss_pred HHHH-cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CC-CCHHHHHHHHHHHHHcCC
Q psy17691 159 IKRE-QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI---QP-SFADAYSNMGNTLKEMQD 233 (673)
Q Consensus 159 ~~~~-~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~---~p-~~~~~~~~lg~~~~~~g~ 233 (673)
+... .|++++|..+|+++++.+|++..+|.+++.++..+|++++|+..|+++++. .| +...+|..++..+...|+
T Consensus 177 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~ 256 (308)
T 2ond_A 177 MEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 256 (308)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC
Confidence 6544 799999999999999999999999999999999999999999999999996 55 478899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-cccCCCCHHHHHHHH
Q psy17691 234 IQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG-FFIRTDLNSAYFWLL 284 (673)
Q Consensus 234 ~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~-l~l~p~~~~a~~~l~ 284 (673)
+++|...++++++..|++.+... ++.+ ..++. +.++|+++.++..+|
T Consensus 257 ~~~a~~~~~~a~~~~p~~~~~~~-~~~~---~~r~~~l~~~P~~~~~ln~lg 304 (308)
T 2ond_A 257 LASILKVEKRRFTAFREEYEGKE-TALL---VDRYKFMDLYPCSASELKALG 304 (308)
T ss_dssp HHHHHHHHHHHHHHTTTTTSSCH-HHHH---HTTTCBTTBCSSCHHHHHTTT
T ss_pred HHHHHHHHHHHHHHcccccccch-HHHH---HHHHHhcccCCCCHHHHHhcC
Confidence 99999999999999998654321 1222 34445 889999999887665
No 75
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.66 E-value=1.7e-15 Score=156.13 Aligned_cols=168 Identities=11% Similarity=0.040 Sum_probs=151.7
Q ss_pred hhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy17691 102 KSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVF 180 (673)
Q Consensus 102 ~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~ 180 (673)
...+........|++...+ ..+..+...|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..++++++.+
T Consensus 102 ~~~l~~~l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 102 EEAIRALLDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 3444444444457776666 445566789999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q psy17691 181 PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF--ADAHSNL 258 (673)
Q Consensus 181 p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~~~L 258 (673)
|+....+...+..+...++.++|++.|+++++.+|++..+++++|.++...|++++|+..|+++++.+|++ ..++.+|
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 98887888888889999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHcCCCc
Q psy17691 259 ASIHKDSGKRG 269 (673)
Q Consensus 259 a~~~~~~g~~~ 269 (673)
+.++...|+.+
T Consensus 262 ~~~~~~~g~~~ 272 (287)
T 3qou_A 262 QEILAALGTGD 272 (287)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHcCCCC
Confidence 99999999865
No 76
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.66 E-value=3.6e-14 Score=157.37 Aligned_cols=262 Identities=14% Similarity=0.079 Sum_probs=172.1
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH----cCC-------------CCcHHHHHHHHHHHHH----cCChhhhcCChhh
Q psy17691 6 IDTYRRAIELQPNFPDAYCNLANALKE----KGQ-------------PNFPDAYCNLANALKE----KGQINVLHKPPYK 64 (673)
Q Consensus 6 i~~~~kAL~l~P~~~~a~~~Lg~~~~~----~g~-------------~~~a~a~~~la~~l~~----~g~~~~A~~~~~~ 64 (673)
+..++++.+ ++++++++.+|.+|.. .++ ..++.+++.+|..+.. .+++++|.. .++
T Consensus 27 ~~~~~~~a~--~g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~-~~~ 103 (490)
T 2xm6_A 27 LEQLKQKAE--SGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVI-WYK 103 (490)
T ss_dssp HHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHH-HHH
T ss_pred HHHHHHHHH--CCCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHH-HHH
Confidence 445555443 5677888888887777 554 3556677777777777 777777765 333
Q ss_pred HHhhcC-CCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHH-H----cCCHHHHHHH
Q psy17691 65 YTRELA-PGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVL-L----LIQVSEAEEC 138 (673)
Q Consensus 65 ~~~~l~-p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~-~----~g~~~~A~~~ 138 (673)
++.... +.....++.++..-... .....+++..+....+.++..++..++.++ . .+++++|+.+
T Consensus 104 ~a~~~~~~~a~~~Lg~~y~~g~g~----------~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 173 (490)
T 2xm6_A 104 KAALKGLPQAQQNLGVMYHEGNGV----------KVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREW 173 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSSS----------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHcCCCC----------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 333322 22234556665541100 012344555555555566666665554443 3 6678888888
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHH
Q psy17691 139 YNTALRLCPTHADSLNNLANIKRE----QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ----QGKLTDALLHYKEA 210 (673)
Q Consensus 139 ~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~eA~~~~~~a 210 (673)
|+++++. .++.+++.+|.+|.. .+++++|+.+|+++.+. +++.+++++|.+|.. .+++++|+.+|+++
T Consensus 174 ~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a 249 (490)
T 2xm6_A 174 YSKAAEQ--GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS--GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQS 249 (490)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 8887775 567788888888877 77888888888887764 467777888888776 77788888888887
Q ss_pred HHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----CCCc-------cccCC
Q psy17691 211 IRIQPSFADAYSNMGNTLKE----MQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS-----GKRG-------FFIRT 274 (673)
Q Consensus 211 l~~~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~-----g~~~-------l~l~p 274 (673)
++. .++.+++++|.+|.. .+++++|+.+|+++.+. +++.++++||.+|... ++++ .....
T Consensus 250 ~~~--~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~ 325 (490)
T 2xm6_A 250 AEQ--GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ 325 (490)
T ss_dssp HTT--TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT
T ss_pred HHC--CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc
Confidence 765 456777888888877 77888888888887654 5677778888877776 4444 22344
Q ss_pred CCHHHHHHHHHHhh
Q psy17691 275 DLNSAYFWLLLLDA 288 (673)
Q Consensus 275 ~~~~a~~~l~~~~~ 288 (673)
+++.++++++....
T Consensus 326 ~~~~a~~~lg~~y~ 339 (490)
T 2xm6_A 326 GDATAQANLGAIYF 339 (490)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 66677777775543
No 77
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.65 E-value=1.6e-14 Score=149.71 Aligned_cols=206 Identities=11% Similarity=-0.005 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhh
Q psy17691 3 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSS 82 (673)
Q Consensus 3 ~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~ 82 (673)
++|+.++.++|.++|++..+|...+.++..+|. .++++++.
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~-----------------~~~~eeL~---------------------- 90 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPN-----------------RNLYDELD---------------------- 90 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTT-----------------SCHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccc-----------------ccHHHHHH----------------------
Confidence 578888888888999888888888888887772 11111110
Q ss_pred hcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHH-----Hc---CCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 83 DFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVL-----LL---IQVSEAEECYNTALRLCPTHADSLN 154 (673)
Q Consensus 83 ~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~-----~~---g~~~~A~~~~~~al~~~p~~~~a~~ 154 (673)
.-...+..+|++..+|...+.++ .. +++++++.+++++++.+|++..+|.
T Consensus 91 ----------------------~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~ 148 (306)
T 3dra_A 91 ----------------------WCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWS 148 (306)
T ss_dssp ----------------------HHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ----------------------HHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 00112334566666664443333 23 5666777777777777777777777
Q ss_pred HHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 155 NLANIKREQGYIE--EATRLYLKALEVFPEFAAAHSNLASVLQQQGK------LTDALLHYKEAIRIQPSFADAYSNMGN 226 (673)
Q Consensus 155 ~Lg~~~~~~g~~~--eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~------~~eA~~~~~~al~~~p~~~~~~~~lg~ 226 (673)
..+.++...|+++ +++++++++++.+|.+..+|++.+.++...++ ++++++++++++..+|++..+|+.++.
T Consensus 149 ~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ 228 (306)
T 3dra_A 149 YRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLG 228 (306)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHH
Confidence 7777777666666 67777777777777777777777776666665 667777777777777777777777777
Q ss_pred HHHHcCCHHH-HHHHHHHHHHhC---CCCHHHHHHHHHHHHHcCCCc
Q psy17691 227 TLKEMQDIQG-ALQCYSRAIQIN---PGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 227 ~~~~~g~~~e-A~~~~~~Al~l~---p~~~~a~~~La~~~~~~g~~~ 269 (673)
++.+.|+..+ ...+++++++++ |.+..++..|+.++.+.|+.+
T Consensus 229 ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~ 275 (306)
T 3dra_A 229 IHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYN 275 (306)
T ss_dssp HHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHH
T ss_pred HHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHH
Confidence 7766666443 334555555554 666667777777766666655
No 78
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.65 E-value=1.1e-15 Score=145.18 Aligned_cols=150 Identities=14% Similarity=0.093 Sum_probs=134.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-Hc
Q psy17691 119 TFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQ-QQ 197 (673)
Q Consensus 119 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~-~~ 197 (673)
.+..+..+...|++++|+..|+++++.+|+++.+++.+|.++...|++++|+..++++++.+| ++..+..++.+.. ..
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQ 87 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhh
Confidence 345566778899999999999999999999999999999999999999999999999999999 8877776665533 33
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCCc
Q psy17691 198 GKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF--ADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 198 g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~~~La~~~~~~g~~~ 269 (673)
++..+|+..++++++.+|+++.+++++|.++..+|++++|+..|+++++.+|+. ..++.+++.++...|+.+
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 344568999999999999999999999999999999999999999999999976 569999999999999875
No 79
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.64 E-value=6.9e-15 Score=145.60 Aligned_cols=132 Identities=16% Similarity=0.131 Sum_probs=117.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhh
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHAD---SLNNLANIKRE------------------QGYIEEATRLYLKALEV 179 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~---a~~~Lg~~~~~------------------~g~~~eA~~~~~~al~~ 179 (673)
..+..++..|++++|+..|+++++.+|++.. +++.+|.++.. +|++++|+..|+++++.
T Consensus 46 ~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 125 (225)
T 2yhc_A 46 DLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG 125 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH
Confidence 4456667789999999999999999999864 88999999886 57999999999999999
Q ss_pred CCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHH
Q psy17691 180 FPEFAAAH-----------------SNLASVLQQQGKLTDALLHYKEAIRIQPSFA---DAYSNMGNTLKEMQDIQGALQ 239 (673)
Q Consensus 180 ~p~~~~~~-----------------~~la~~~~~~g~~~eA~~~~~~al~~~p~~~---~~~~~lg~~~~~~g~~~eA~~ 239 (673)
+|++..++ ..+|.+|...|++++|+..|+++++..|+++ +++..+|.++.++|++++|++
T Consensus 126 ~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~ 205 (225)
T 2yhc_A 126 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 205 (225)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHH
Confidence 99986544 6789999999999999999999999999986 689999999999999999999
Q ss_pred HHHHHHHhCCCCH
Q psy17691 240 CYSRAIQINPGFA 252 (673)
Q Consensus 240 ~~~~Al~l~p~~~ 252 (673)
.++++....|++.
T Consensus 206 ~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 206 VAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHCCSCCC
T ss_pred HHHHHHhhCCCch
Confidence 9999998888753
No 80
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=8.4e-16 Score=140.61 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=113.9
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 137 ECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS 216 (673)
Q Consensus 137 ~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~ 216 (673)
..|+++++.+|++..+++.+|.++...|++++|+..|+++++.+|++..+|+++|.++...|++++|+..|+++++++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 217 FADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 217 ~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
++.+++++|.+|..+|++++|+.+|+++++++|+++........+
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 999999999999999999999999999999999887655544444
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.63 E-value=1.9e-15 Score=156.10 Aligned_cols=144 Identities=12% Similarity=0.079 Sum_probs=116.2
Q ss_pred HHHHHHH-HHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-----
Q psy17691 119 TFSYIIS-VLLL-IQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAA----- 185 (673)
Q Consensus 119 ~~~~~~~-~~~~-g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~----- 185 (673)
++..++. +... |++++|+.+|++++++.|.. ..++.++|.++..+|++++|+.+|++++++.|++..
T Consensus 119 ~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 198 (292)
T 1qqe_A 119 FKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSL 198 (292)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGH
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHH
Confidence 3444444 4454 99999999999999998754 568999999999999999999999999999987643
Q ss_pred --HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----HHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 186 --AHSNLASVLQQQGKLTDALLHYKEAIRIQPSFAD-----AYSNMGNTLK--EMQDIQGALQCYSRAIQINPGFADAHS 256 (673)
Q Consensus 186 --~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~-----~~~~lg~~~~--~~g~~~eA~~~~~~Al~l~p~~~~a~~ 256 (673)
++.++|.++..+|++++|+.+|+++++++|+... .+..++..+. ..+++++|+..|++++.++|.+...+.
T Consensus 199 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~~~~~~ 278 (292)
T 1qqe_A 199 KDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILN 278 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHHHHHHH
Confidence 6899999999999999999999999999998765 3455666665 467899999999999999998877777
Q ss_pred HHHHHH
Q psy17691 257 NLASIH 262 (673)
Q Consensus 257 ~La~~~ 262 (673)
.+-...
T Consensus 279 ~~k~~~ 284 (292)
T 1qqe_A 279 KIKESI 284 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665554
No 82
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.63 E-value=5.8e-15 Score=131.55 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 147 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGN 226 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 226 (673)
|..+..+..+|..+...|++++|+..|+++++++|++..++.++|.++..+|++++|+..|+++++++|++..++.++|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHc
Q psy17691 227 TLKEMQDIQGALQCYSRAIQIN------PGFADAHSNLASIHKDS 265 (673)
Q Consensus 227 ~~~~~g~~~eA~~~~~~Al~l~------p~~~~a~~~La~~~~~~ 265 (673)
++..+|++++|+.+|+++++++ |++..++..+..+....
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 99999999988877553
No 83
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=155.29 Aligned_cols=195 Identities=27% Similarity=0.310 Sum_probs=151.4
Q ss_pred CHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCC
Q psy17691 1 LIDLAIDTYRRAIEL--------QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPG 72 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l--------~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~ 72 (673)
++++|+..|++++++ +|....++..+|.++...|+++.+..++..+....... ..
T Consensus 42 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~-- 104 (311)
T 3nf1_A 42 RYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKT---------------LG-- 104 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---------------HC--
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---------------hC--
Confidence 478999999999995 67778888889999988887766666665554432110 00
Q ss_pred chhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhC-----
Q psy17691 73 NRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLC----- 146 (673)
Q Consensus 73 ~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~----- 146 (673)
...+....++. .+..+...|++++|+.+|++++++.
T Consensus 105 --------------------------------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 146 (311)
T 3nf1_A 105 --------------------------------------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 146 (311)
T ss_dssp --------------------------------------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred --------------------------------------CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC
Confidence 00112233343 3345556899999999999999884
Q ss_pred ---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q psy17691 147 ---PTHADSLNNLANIKREQGYIEEATRLYLKALEV--------FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI-- 213 (673)
Q Consensus 147 ---p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~-- 213 (673)
|....++..+|.++...|++++|+.+++++++. .|....++.++|.++...|++++|+++|+++++.
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 147 KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 555778999999999999999999999999988 6666788999999999999999999999999974
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 214 -----------------------------------------------QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 214 -----------------------------------------------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
+|....++.++|.+|..+|++++|+.+|+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 306 (311)
T 3nf1_A 227 EREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMR 306 (311)
T ss_dssp HHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355567888899999999999999999999988
Q ss_pred hCCC
Q psy17691 247 INPG 250 (673)
Q Consensus 247 l~p~ 250 (673)
+.|+
T Consensus 307 l~~~ 310 (311)
T 3nf1_A 307 SRKQ 310 (311)
T ss_dssp HHC-
T ss_pred Hhhc
Confidence 8764
No 84
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.63 E-value=1.1e-15 Score=145.15 Aligned_cols=133 Identities=14% Similarity=0.068 Sum_probs=111.7
Q ss_pred CCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 113 SPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKR-EQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 113 ~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~-~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
+|++..++..+ ..+...|++++|+..|+++++.+| ++..+..++.+.. ..++..+|+..++++++.+|++..+++++
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~l 114 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACEL 114 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHH
Confidence 45666665444 344557799999999999999999 8877776665533 33444568999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSF--ADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~--~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
|.++...|++++|+..|+++++.+|+. ..++.++|.++..+|+.++|+..|++++.
T Consensus 115 a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 115 AVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 999999999999999999999999875 56999999999999999999999999875
No 85
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.63 E-value=6.6e-15 Score=145.72 Aligned_cols=150 Identities=9% Similarity=-0.028 Sum_probs=136.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHH
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCPTH---ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA---AAHSNLASV 193 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~---~~~~~la~~ 193 (673)
+..+..++..|++++|+..|+++++.+|++ ..+++.+|.+|..+|++++|+..|+++++.+|++. .+++.+|.+
T Consensus 8 ~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~ 87 (225)
T 2yhc_A 8 YATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLT 87 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHH
Confidence 455667788999999999999999999986 47999999999999999999999999999999985 489999999
Q ss_pred HHH------------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHH
Q psy17691 194 LQQ------------------QGKLTDALLHYKEAIRIQPSFADAY-----------------SNMGNTLKEMQDIQGAL 238 (673)
Q Consensus 194 ~~~------------------~g~~~eA~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g~~~eA~ 238 (673)
+.. .|++++|+..|+++++..|++..++ ..+|.+|.++|++++|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~ 167 (225)
T 2yhc_A 88 NMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVV 167 (225)
T ss_dssp HHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 886 5789999999999999999987544 67899999999999999
Q ss_pred HHHHHHHHhCCCCH---HHHHHHHHHHHHcCCCc
Q psy17691 239 QCYSRAIQINPGFA---DAHSNLASIHKDSGKRG 269 (673)
Q Consensus 239 ~~~~~Al~l~p~~~---~a~~~La~~~~~~g~~~ 269 (673)
..|+++++..|+++ +++..+|.++.++|+++
T Consensus 168 ~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 168 NRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 99999999999986 68999999999999976
No 86
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.62 E-value=2e-15 Score=152.25 Aligned_cols=192 Identities=27% Similarity=0.297 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCc
Q psy17691 2 IDLAIDTYRRAIEL--------QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGN 73 (673)
Q Consensus 2 ~~eAi~~~~kAL~l--------~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~ 73 (673)
+++|+..|++++++ +|..+.++..+|.++...|+++.+..++..+........
T Consensus 17 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~------------------- 77 (283)
T 3edt_B 17 RGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL------------------- 77 (283)
T ss_dssp SSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHc-------------------
Confidence 45677777777764 366678888888888888876666666655544321100
Q ss_pred hhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHh-------
Q psy17691 74 RIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRL------- 145 (673)
Q Consensus 74 ~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~------- 145 (673)
+ ...|....++. .+..+...|++++|+.+|+++++.
T Consensus 78 -----------~-------------------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 78 -----------G-------------------------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp -----------C-------------------------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----------C-------------------------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCC
Confidence 0 00122233443 344556699999999999999998
Q ss_pred -CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--
Q psy17691 146 -CPTHADSLNNLANIKREQGYIEEATRLYLKALEV--------FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ-- 214 (673)
Q Consensus 146 -~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~-- 214 (673)
+|....++.++|.++...|++++|+.++++++++ .|....++.++|.++..+|++++|+.++++++++.
T Consensus 122 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 122 FHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4667889999999999999999999999999998 67778899999999999999999999999999862
Q ss_pred -----------------------------------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 215 -----------------------------------------------PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 215 -----------------------------------------------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
|....++..+|.+|..+|++++|+.+|++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 202 KEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp HHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 334567888999999999999999999998875
Q ss_pred C
Q psy17691 248 N 248 (673)
Q Consensus 248 ~ 248 (673)
.
T Consensus 282 ~ 282 (283)
T 3edt_B 282 R 282 (283)
T ss_dssp C
T ss_pred h
Confidence 3
No 87
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.62 E-value=2.1e-15 Score=140.01 Aligned_cols=107 Identities=13% Similarity=-0.006 Sum_probs=99.0
Q ss_pred cCCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
++|++...+.. +..++..|++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 56667766644 45566799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFA 218 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~ 218 (673)
|.+|..+|++++|+.+|++++++.|+..
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999864
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=1.3e-15 Score=160.83 Aligned_cols=135 Identities=13% Similarity=0.037 Sum_probs=122.4
Q ss_pred CCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 113 SPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTH---------------ADSLNNLANIKREQGYIEEATRLYLKA 176 (673)
Q Consensus 113 ~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~Lg~~~~~~g~~~eA~~~~~~a 176 (673)
.|+....+. .+..++..|++++|+.+|+++++++|++ ..++.++|.+|..+|++++|+.+|+++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344455554 4455667899999999999999999998 699999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHh
Q psy17691 177 LEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGA-LQCYSRAIQI 247 (673)
Q Consensus 177 l~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA-~~~~~~Al~l 247 (673)
++++|++..+++++|.++..+|++++|+..|+++++++|++..++.++|.++..+|++++| ...|++++..
T Consensus 223 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 223 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 5677777654
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.61 E-value=4e-14 Score=125.43 Aligned_cols=131 Identities=32% Similarity=0.444 Sum_probs=124.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 200 (673)
..+..+...|++++|+..++++++.+|++..++..+|.++...|++++|+..++++++..|.+..++..+|.++...|++
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY 85 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCH
Confidence 34456667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
++|++.++++++..|++..++..+|.++...|++++|+.+|+++++.+|++
T Consensus 86 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 86 DEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999999999999999998863
No 90
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=4.3e-16 Score=164.51 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=135.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF---------------AAAHSNLASV 193 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---------------~~~~~~la~~ 193 (673)
++++++|+..|+++++.+|+++.++.++|.++..+|++++|+.+|+++++++|++ ..+++++|.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999999999999999999999999 6999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+..+|++++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.+++.++...|+++
T Consensus 206 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 206 HLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988764
No 91
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=5.3e-15 Score=152.46 Aligned_cols=170 Identities=16% Similarity=0.063 Sum_probs=149.7
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhhcCCCcccccc
Q psy17691 14 ELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSDFGNHPTSHLM 93 (673)
Q Consensus 14 ~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~l~~~~~a~~~ 93 (673)
..-|++.+.++.+|..+...|+++.+...+..+
T Consensus 111 ~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~a----------------------------------------------- 143 (287)
T 3qou_A 111 XVLPREEELXAQQAMQLMQESNYTDALPLLXDA----------------------------------------------- 143 (287)
T ss_dssp HHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH-----------------------------------------------
T ss_pred HHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHH-----------------------------------------------
Confidence 345999999999999999999755555444332
Q ss_pred cccCCCCchhHHHHHHHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy17691 94 QSVPGMHNKSRVEIFCYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRL 172 (673)
Q Consensus 94 ~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~ 172 (673)
+..+|++..++..+ ..+...|++++|+..|+++++.+|+........+..+...++.++|+..
T Consensus 144 ----------------l~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~ 207 (287)
T 3qou_A 144 ----------------WQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQ 207 (287)
T ss_dssp ----------------HHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred ----------------HHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHH
Confidence 23567777777554 5566799999999999999999998887888888889999999999999
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 173 YLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF--ADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 173 ~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~--~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
|+++++.+|++..+++++|.++...|++++|++.|+++++.+|++ ..++.++|.++..+|+.++|...|++++.
T Consensus 208 l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 208 LQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 88999999999999999999999999885
No 92
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.60 E-value=6.7e-15 Score=139.35 Aligned_cols=131 Identities=13% Similarity=0.103 Sum_probs=120.5
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCH--HHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASV-LQQQGKL--TDAL 204 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~-~~~~g~~--~eA~ 204 (673)
..|++++|+..++++++.+|++..++..+|.++...|++++|+.+|+++++++|++..++.++|.+ +...|++ ++|+
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~ 101 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTR 101 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHH
Confidence 456899999999999999999999999999999999999999999999999999999999999999 8899999 9999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 205 LHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNL 258 (673)
Q Consensus 205 ~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~L 258 (673)
..|+++++.+|++..++.++|.++..+|++++|+.+|+++++++|++......+
T Consensus 102 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 155 (177)
T 2e2e_A 102 AMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLV 155 (177)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999999886554333
No 93
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.60 E-value=3.5e-15 Score=159.74 Aligned_cols=212 Identities=14% Similarity=0.150 Sum_probs=162.4
Q ss_pred CHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch
Q psy17691 1 LIDLAIDTYRRAIEL------QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR 74 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l------~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~ 74 (673)
++++|+..|++++++ .+..+.++..+|.+|..+|+++.+..++..+..+.......
T Consensus 118 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~------------------ 179 (383)
T 3ulq_A 118 EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY------------------ 179 (383)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT------------------
T ss_pred CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc------------------
Confidence 478999999999987 22356788888888888888777777777666554332100
Q ss_pred hhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q psy17691 75 IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTH---- 149 (673)
Q Consensus 75 ~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~---- 149 (673)
.+....++ ..+..+...|++++|+.+|++++++.+..
T Consensus 180 --------------------------------------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 180 --------------------------------------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred --------------------------------------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 00112233 33455667899999999999999885543
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CC
Q psy17691 150 --ADSLNNLANIKREQGYIEEATRLYLKALE-----VF-PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ-----PS 216 (673)
Q Consensus 150 --~~a~~~Lg~~~~~~g~~~eA~~~~~~al~-----~~-p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~-----p~ 216 (673)
..++.++|.+|..+|++++|+.+|+++++ .+ |....++.++|.++..+|++++|+.++++++++. |.
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 301 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVI 301 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 35899999999999999999999999999 46 7778899999999999999999999999999883 33
Q ss_pred CHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 217 FADAYSNMGNTLKEMQD---IQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 217 ~~~~~~~lg~~~~~~g~---~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
....+..+|.++...|+ +++|+..+++. ...+....++..||.+|...|+++
T Consensus 302 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~la~~y~~~g~~~ 356 (383)
T 3ulq_A 302 YLSEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYADLEDFAIDVAKYYHERKNFQ 356 (383)
T ss_dssp HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHHHHHHHHHHHHHHHHHCCCHH
Confidence 34456789999999999 78888888776 334445668889999999999875
No 94
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.60 E-value=1.7e-14 Score=158.63 Aligned_cols=137 Identities=15% Similarity=0.126 Sum_probs=98.9
Q ss_pred HHHHH-HHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 119 TFSYI-ISVLLLI---QVSEAEECYNTALRLCPTHADSLNNLANIKREQ----GYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 119 ~~~~~-~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~----g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
++..+ ..+...| ++++|+.+|+++.+..+..+..++++|.+|... +++++|+.+|+++. |+++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 44333 3444566 777777777777777777777777777777654 67777777777776 7777777777
Q ss_pred HHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 191 ASV-L--QQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ-----DIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 191 a~~-~--~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
|.+ + ...+++++|+++|+++.+.. ++.+++++|.+|. .| ++++|+.+|+++. ++++.++++||.+|
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 777 3 45677777777777777543 6777777777777 44 7777777777777 77777777777776
Q ss_pred HH
Q psy17691 263 KD 264 (673)
Q Consensus 263 ~~ 264 (673)
..
T Consensus 329 ~~ 330 (452)
T 3e4b_A 329 RR 330 (452)
T ss_dssp HT
T ss_pred HC
Confidence 65
No 95
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=2.3e-14 Score=126.70 Aligned_cols=124 Identities=25% Similarity=0.348 Sum_probs=116.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 146 CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMG 225 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg 225 (673)
+|.+..++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 226 NTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 226 ~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
.++..+|++++|+.+|+++++++|++..++..++.++...|+++
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998864
No 96
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.59 E-value=2.2e-14 Score=161.74 Aligned_cols=139 Identities=12% Similarity=0.020 Sum_probs=133.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHH
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQG--YIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG-KLTDALLHY 207 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g--~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g-~~~eA~~~~ 207 (673)
.+++++..++++++.+|++..+|+..+.++...+ ++++|+++++++++.+|.+..+|.+.+.++...| .++++++++
T Consensus 88 ~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~ 167 (567)
T 1dce_A 88 LVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFT 167 (567)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHH
Confidence 4889999999999999999999999999999999 7799999999999999999999999999999999 999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 208 KEAIRIQPSFADAYSNMGNTLKEM--------------QDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 208 ~~al~~~p~~~~~~~~lg~~~~~~--------------g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+++++.+|.+..+|++++.++..+ +.+++|++++.+|+.++|++..+|+.++.++...++++
T Consensus 168 ~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~ 243 (567)
T 1dce_A 168 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHD 243 (567)
T ss_dssp HTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCS
T ss_pred HHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCcc
Confidence 999999999999999999999985 66899999999999999999999999999998888755
No 97
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.59 E-value=5.6e-15 Score=151.60 Aligned_cols=130 Identities=28% Similarity=0.358 Sum_probs=115.8
Q ss_pred hHHH-HHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------
Q psy17691 118 TTFS-YIISVLLLIQVSEAEECYNTALRL--------CPTHADSLNNLANIKREQGYIEEATRLYLKALEVF-------- 180 (673)
Q Consensus 118 ~~~~-~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~-------- 180 (673)
.++. .+..+...|++++|+.+|+++++. .|....++..+|.++...|++++|+.++++++++.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3443 445566799999999999999998 35567899999999999999999999999999884
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 181 PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI--------QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 181 p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
|....++.++|.++...|++++|+++|+++++. .|....++.++|.++..+|++++|+.+|+++++.
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 556788999999999999999999999999998 6777789999999999999999999999999975
No 98
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.59 E-value=9.2e-14 Score=155.69 Aligned_cols=152 Identities=13% Similarity=0.092 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHh-hCCCCHHHHHHHHHHHHHc
Q psy17691 133 SEAEECYNTALRLCPTHADSLNNLANIKRE-------QGYIE-------EATRLYLKALE-VFPEFAAAHSNLASVLQQQ 197 (673)
Q Consensus 133 ~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~-------~g~~~-------eA~~~~~~al~-~~p~~~~~~~~la~~~~~~ 197 (673)
++++..|++++..+|+++.+|..+|..+.. .|+++ +|...|+++++ ..|++..+|..+|.++...
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 356667777777777777777777777665 56665 67777777775 6777777777777777777
Q ss_pred CCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCCc------
Q psy17691 198 GKLTDALLHYKEAIRIQPSFA-DAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASI-HKDSGKRG------ 269 (673)
Q Consensus 198 g~~~eA~~~~~~al~~~p~~~-~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~-~~~~g~~~------ 269 (673)
|++++|.+.|++++++.|.++ .+|.++|.++.++|++++|++.|++|++..|.....+...+.+ +...|+++
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~ 414 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIF 414 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHH
Confidence 777777777777777777664 4677777777777777777777777777766665555555444 23456554
Q ss_pred ---cccCCCCHHHHHHHH
Q psy17691 270 ---FFIRTDLNSAYFWLL 284 (673)
Q Consensus 270 ---l~l~p~~~~a~~~l~ 284 (673)
++..|+++.++..++
T Consensus 415 e~al~~~p~~~~~~~~~~ 432 (530)
T 2ooe_A 415 ELGLKKYGDIPEYVLAYI 432 (530)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHH
Confidence 556677766665555
No 99
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=128.04 Aligned_cols=122 Identities=22% Similarity=0.299 Sum_probs=111.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 146 CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMG 225 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg 225 (673)
.|.+..+++.+|.++...|++++|+..|+++++.+|++..+++++|.++...|++++|+..++++++.+|++..++.++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 35668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 226 NTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 226 ~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~ 267 (673)
.++..+|++++|+.+|+++++++|++..++..++.++...|+
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999887764
No 100
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.59 E-value=1.7e-14 Score=135.04 Aligned_cols=117 Identities=21% Similarity=0.256 Sum_probs=107.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 146 CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMG 225 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg 225 (673)
++.++..++.+|.++...|++++|+.+|+++++++|++..+++++|.++..+|++++|+..|+++++++|++..+|+++|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 226 NTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 226 ~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
.+|..+|++++|+.+|+++++++|++..++.+++...
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999999988776665543
No 101
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.58 E-value=1e-13 Score=155.25 Aligned_cols=209 Identities=11% Similarity=0.107 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------cCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchh
Q psy17691 3 DLAIDTYRRAIELQPNFPDAYCNLANALKE-------KGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRI 75 (673)
Q Consensus 3 ~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~-------~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~ 75 (673)
+.|+..|++++..+|+++++|+.+|..+.. .|+.+.+..... +
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~------------~------------------ 304 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSD------------E------------------ 304 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHH------------H------------------
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhH------------H------------------
Confidence 367889999999999999999999999886 454331111000 1
Q ss_pred hhhhhhhhcCCCcccccccccCCCCchhHHHHH--HHh-cCCCChhHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCH-
Q psy17691 76 RIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIF--CYA-LSPDDGTTFSYIIS-VLLLIQVSEAEECYNTALRLCPTHA- 150 (673)
Q Consensus 76 ~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~--~~~-l~p~~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~- 150 (673)
+...+ ++. ..|++...|...+. +...|++++|...|+++++..|.++
T Consensus 305 ----------------------------A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 356 (530)
T 2ooe_A 305 ----------------------------AANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT 356 (530)
T ss_dssp ----------------------------HHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH
T ss_pred ----------------------------HHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch
Confidence 11111 222 35777777755544 4568999999999999999999985
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASV-LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLK 229 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~-~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 229 (673)
.+|..+|.++.+.|++++|...|+++++..|.....+...+.+ +...|++++|...|+++++..|+++.+|.+++.++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 6999999999999999999999999999999888777777766 346899999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHcCCCc
Q psy17691 230 EMQDIQGALQCYSRAIQINPGFAD----AHSNLASIHKDSGKRG 269 (673)
Q Consensus 230 ~~g~~~eA~~~~~~Al~l~p~~~~----a~~~La~~~~~~g~~~ 269 (673)
..|+.++|...|++++...|.++. .|..........|+.+
T Consensus 437 ~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~ 480 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLA 480 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHH
T ss_pred hCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 999999999999999998765544 8888888888888765
No 102
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.58 E-value=5.4e-14 Score=136.82 Aligned_cols=141 Identities=13% Similarity=0.048 Sum_probs=126.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGK 199 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 199 (673)
+..+..++..|++++|+..|++++ +| ++.+++++|.++...|++++|+.+|+++++++|++..+++++|.++...|+
T Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~ 86 (213)
T 1hh8_A 10 WNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEK 86 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHccc
Confidence 355566778999999999999996 33 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 200 LTDALLHYKEAIRIQPSFA----------------DAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHK 263 (673)
Q Consensus 200 ~~eA~~~~~~al~~~p~~~----------------~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~ 263 (673)
+++|++.|+++++..|++. .+++++|.++..+|++++|+.+|+++++++|++.......+....
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 9999999999999888776 999999999999999999999999999999987655544444433
No 103
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.58 E-value=5e-14 Score=154.86 Aligned_cols=239 Identities=14% Similarity=0.079 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------------CCcHHHHHHHHHHHHHcCChhhhcCC---h
Q psy17691 2 IDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQ----------------PNFPDAYCNLANALKEKGQINVLHKP---P 62 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~----------------~~~a~a~~~la~~l~~~g~~~~A~~~---~ 62 (673)
+++|+..|+++++. +++.++++||.+|...++ ...+.+++.+|..+...+.++++... .
T Consensus 90 ~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~ 167 (452)
T 3e4b_A 90 HHEAESLLKKAFAN--GEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERI 167 (452)
T ss_dssp HHHHHHHHHHHHHT--TCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcccCHHHHHHH
Confidence 56788888888874 445588888888887664 23456777888888888876665543 3
Q ss_pred hhHHhhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHH--hcCCCChhHHHHHHHHHHc-----CCHHHH
Q psy17691 63 YKYTRELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCY--ALSPDDGTTFSYIISVLLL-----IQVSEA 135 (673)
Q Consensus 63 ~~~~~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~--~l~p~~~~~~~~~~~~~~~-----g~~~~A 135 (673)
++.+....|.....++.++...+... ...+++..+.. ...+.....+..++.++.. +++++|
T Consensus 168 ~~~a~~~~~~a~~~Lg~~~~~~g~~~-----------~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A 236 (452)
T 3e4b_A 168 CKAALNTTDICYVELATVYQKKQQPE-----------QQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTA 236 (452)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCcc-----------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHH
Confidence 33344445555566777776644211 23445555543 4455556655666666654 599999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-----CHHHHHHHH
Q psy17691 136 EECYNTALRLCPTHADSLNNLANI-K--REQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG-----KLTDALLHY 207 (673)
Q Consensus 136 ~~~~~~al~~~p~~~~a~~~Lg~~-~--~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g-----~~~eA~~~~ 207 (673)
+.+|+++. |+++.++++||.+ + ...+++++|+.+|+++.+. +++.++++||.+|. .| ++++|+.+|
T Consensus 237 ~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~ 310 (452)
T 3e4b_A 237 QALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHF 310 (452)
T ss_dssp HHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHH
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHH
Confidence 99999998 8999999999999 4 5789999999999999865 58999999999998 56 999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 208 KEAIRIQPSFADAYSNMGNTLKE----MQDIQGALQCYSRAIQINPGFADAHSNLASIHKD 264 (673)
Q Consensus 208 ~~al~~~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~ 264 (673)
+++. +.++.++++||.+|.. ..++++|+.+|+++.+ .+++.+.++||.+|..
T Consensus 311 ~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 311 EKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR--NGQNSADFAIAQLFSQ 366 (452)
T ss_dssp HTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT--TTCTTHHHHHHHHHHS
T ss_pred HHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh--hChHHHHHHHHHHHHh
Confidence 9999 8899999999999987 4599999999999986 5678899999999864
No 104
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.58 E-value=3.3e-13 Score=140.65 Aligned_cols=207 Identities=12% Similarity=0.047 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhh
Q psy17691 3 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSS 82 (673)
Q Consensus 3 ~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~ 82 (673)
++|+..+.++|.++|++..+|...+.++..+++....... ... ++++
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~---~~~------l~~E------------------------ 93 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEES---AAL------VKAE------------------------ 93 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHH---HHH------HHHH------------------------
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhh---hHH------HHHH------------------------
Confidence 5899999999999999999999999999887631111000 000 0000
Q ss_pred hcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHH-HcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 83 DFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVL-LLI--QVSEAEECYNTALRLCPTHADSLNNLANI 159 (673)
Q Consensus 83 ~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~-~~g--~~~~A~~~~~~al~~~p~~~~a~~~Lg~~ 159 (673)
-..-...+..+|.+..+|..-+.++ ..+ .+++++.++.++++.+|.+..+|...+.+
T Consensus 94 --------------------L~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~v 153 (331)
T 3dss_A 94 --------------------LGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFV 153 (331)
T ss_dssp --------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 0011124456888888886655444 466 48999999999999999999999999999
Q ss_pred HHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 160 KREQGY-IEEATRLYLKALEVFPEFAAAHSNLASVLQQQ--------------GKLTDALLHYKEAIRIQPSFADAYSNM 224 (673)
Q Consensus 160 ~~~~g~-~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~--------------g~~~eA~~~~~~al~~~p~~~~~~~~l 224 (673)
+...|. ++++++++.++++.+|.+..+|++++.++... +.++++++++.+++..+|++..+|+.+
T Consensus 154 l~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~ 233 (331)
T 3dss_A 154 AAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYH 233 (331)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 999998 68999999999999999999999999998877 568899999999999999999999876
Q ss_pred HHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 225 GNTLKEM-----------QDIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 225 g~~~~~~-----------g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
..++... +.+++++++++++++++|++.-.+..++.+.
T Consensus 234 r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w~l~~~~~~~ 282 (331)
T 3dss_A 234 RWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLM 282 (331)
T ss_dssp HHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccchHHHHHHHHH
Confidence 6666555 4588999999999999999865555554443
No 105
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=9e-14 Score=136.43 Aligned_cols=187 Identities=15% Similarity=0.095 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhh
Q psy17691 3 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSS 82 (673)
Q Consensus 3 ~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~ 82 (673)
.+|+..|+++.+. .++.+++.||.+|...++++.+..++..+..
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~---------------------------------- 46 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAA---------------------------------- 46 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----------------------------------
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----------------------------------
Confidence 4688999999876 7899999999999998866666555554421
Q ss_pred hcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 83 DFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVLLLI----QVSEAEECYNTALRLCPTHADSLNNLAN 158 (673)
Q Consensus 83 ~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~~~g----~~~~A~~~~~~al~~~p~~~~a~~~Lg~ 158 (673)
..++.++..++.++..+ ++++|+.+|+++.+ +.++.++++||.
T Consensus 47 -------------------------------~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~ 93 (212)
T 3rjv_A 47 -------------------------------QGDGDALALLAQLKIRNPQQADYPQARQLAEKAVE--AGSKSGEIVLAR 93 (212)
T ss_dssp -------------------------------TTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHH--TTCHHHHHHHHH
T ss_pred -------------------------------cCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHH
Confidence 22344444444444445 89999999999965 578999999999
Q ss_pred HHHH----cCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 159 IKRE----QGYIEEATRLYLKALEVFP--EFAAAHSNLASVLQQ----QGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 159 ~~~~----~g~~~eA~~~~~~al~~~p--~~~~~~~~la~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
+|.. .+++++|+.+|+++.+..+ .++.++++||.+|.. .+++++|+.+|+++++. +.++.++++||.+|
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y 172 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMF 172 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 9998 8999999999999999988 458999999999999 88999999999999998 66788999999999
Q ss_pred HHc-C-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 229 KEM-Q-----DIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 229 ~~~-g-----~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
... | ++++|+.+|+++.+.. +..+...|+.+
T Consensus 173 ~~g~gg~~~~d~~~A~~~~~~A~~~g--~~~A~~~l~~l 209 (212)
T 3rjv_A 173 QQGEKGFIEPNKQKALHWLNVSCLEG--FDTGCEEFDRI 209 (212)
T ss_dssp HHCBTTTBCCCHHHHHHHHHHHHHHT--CHHHHHHHHHH
T ss_pred HcCCCCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHh
Confidence 875 3 8999999999999884 56666666554
No 106
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.57 E-value=1.1e-14 Score=134.50 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=99.8
Q ss_pred hcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q psy17691 111 ALSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSN 189 (673)
Q Consensus 111 ~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 189 (673)
.++|++...+. .+..++..|++++|+..|+++++.+|+++.+|+++|.++..+|++++|+.+|+++++++|+++.++++
T Consensus 15 ~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 94 (148)
T 2vgx_A 15 EISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFH 94 (148)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred cCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHH
Confidence 34555555554 34455668899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIRIQPSFADAYS 222 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 222 (673)
+|.++..+|++++|++.|+++++++|+++....
T Consensus 95 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 95 AAECLLQXGELAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchH
Confidence 999999999999999999999999998776543
No 107
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.57 E-value=5.7e-15 Score=158.77 Aligned_cols=233 Identities=19% Similarity=0.181 Sum_probs=168.1
Q ss_pred CHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHc-CChhhhcCChhhHHhhcCCCc
Q psy17691 1 LIDLAIDTYRRAIEL------QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEK-GQINVLHKPPYKYTRELAPGN 73 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l------~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~-g~~~~A~~~~~~~~~~l~p~~ 73 (673)
++++|+..|++++++ +|....++..+|.+|...|+++.+..++..+..+... ++.... ...
T Consensus 101 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~------------~~~ 168 (411)
T 4a1s_A 101 DYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSE------------GRA 168 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH------------HHH
T ss_pred CHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHH------------HHH
Confidence 478999999999998 6778899999999999999877776666665554322 110000 001
Q ss_pred hhhhhhhhhhcCC----------CcccccccccCCCCchhHHHHHHH------hc--CCCChhHH-HHHHHHHHcCCHHH
Q psy17691 74 RIRIGYVSSDFGN----------HPTSHLMQSVPGMHNKSRVEIFCY------AL--SPDDGTTF-SYIISVLLLIQVSE 134 (673)
Q Consensus 74 ~~~l~~~~~~l~~----------~~~a~~~~~~~~~~~~~a~~~~~~------~l--~p~~~~~~-~~~~~~~~~g~~~~ 134 (673)
...++.++...++ ...+.. ....++..+.. .. .+....++ ..+..+...|++++
T Consensus 169 ~~~l~~~~~~~g~~~~~~~~~~~~~~a~~-------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 241 (411)
T 4a1s_A 169 LYNLGNVYHAKGKHLGQRNPGKFGDDVKE-------ALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQA 241 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCCHHHHH-------HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHcCcccccccchhhhhhhhH-------HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHH
Confidence 1233444444433 000000 01112221111 01 11222344 34455667999999
Q ss_pred HHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHH
Q psy17691 135 AEECYNTALRLCPTHA------DSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLASVLQQQGKLTD 202 (673)
Q Consensus 135 A~~~~~~al~~~p~~~------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~e 202 (673)
|+.+|++++++.+... .++..+|.+|..+|++++|+.+|++++++.+.. ..++.++|.++...|++++
T Consensus 242 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 321 (411)
T 4a1s_A 242 AIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNT 321 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 9999999999876543 389999999999999999999999999987754 6789999999999999999
Q ss_pred HHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 203 ALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 203 A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
|+.+|++++++.+.. ..++..+|.+|..+|++++|+.+|++++++.+...
T Consensus 322 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 377 (411)
T 4a1s_A 322 AIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXXX 377 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 999999999985432 56899999999999999999999999999987543
No 108
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.56 E-value=3.9e-14 Score=143.83 Aligned_cols=223 Identities=10% Similarity=-0.035 Sum_probs=158.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYV 80 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~ 80 (673)
++++|++.|.++++++|+..++|.+++.| |+ ....++..+.. ..+++. .++....+.|......-.+
T Consensus 21 d~~~A~~~F~~a~~~dP~~~Daw~g~~a~----g~-~~~~~L~~~~r-------~~~a~~-~~~~~l~l~p~~l~a~~~~ 87 (282)
T 4f3v_A 21 SEARSLDLFTEITNYDESACDAWIGRIRC----GD-TDRVTLFRAWY-------SRRNFG-QLSGSVQISMSTLNARIAI 87 (282)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHT----TC-CCHHHHHHHHH-------TGGGTT-HHHHTTTCCGGGGCCEEEC
T ss_pred CHHHHHHHHHHHHHhChhhhHHHHhHHHc----cC-CcHHHHHHHHH-------HHHHHH-HHHHHhcCChhhhhhhhcc
Confidence 46789999999999999999999999433 22 11122222111 122221 2333334444332100000
Q ss_pred hhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 81 SSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIK 160 (673)
Q Consensus 81 ~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~ 160 (673)
.+.+..- . ......+...+.++..+...|++++|.+.|+.++...|++. +.+.+|.++
T Consensus 88 ---~g~y~~~---------~---------~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~ 145 (282)
T 4f3v_A 88 ---GGLYGDI---------T---------YPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVY 145 (282)
T ss_dssp ---CTTTCCC---------E---------EECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHH
T ss_pred ---CCccccc---------c---------cccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHH
Confidence 0000000 0 00011122234566777789999999999999999999988 999999999
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCHH
Q psy17691 161 REQGYIEEATRLYLKALEVFPEF--AAAHSNLASVLQQQGKLTDALLHYKEAIRIQ--PS-FADAYSNMGNTLKEMQDIQ 235 (673)
Q Consensus 161 ~~~g~~~eA~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~eA~~~~~~al~~~--p~-~~~~~~~lg~~~~~~g~~~ 235 (673)
.+.+++++|+.+|+++.+..+.. ..+++++|.++..+|++++|+.+|++++... |. ..++++++|.++.++|+.+
T Consensus 146 ~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 146 GAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH
Confidence 99999999999999887753222 4589999999999999999999999998654 55 6679999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 236 GALQCYSRAIQINPGFADAHSNLA 259 (673)
Q Consensus 236 eA~~~~~~Al~l~p~~~~a~~~La 259 (673)
+|...|++++..+|+ ..++..|.
T Consensus 226 eA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 226 AAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHHhcCCc-HHHHHHHh
Confidence 999999999999999 87776663
No 109
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.56 E-value=1.7e-14 Score=153.94 Aligned_cols=244 Identities=18% Similarity=0.142 Sum_probs=163.5
Q ss_pred CCHHHHHHHHHHHHHcCC---------------CCc----HHHHHHHHHHHHHcCChhhhcCChhhHHhhcCC---C---
Q psy17691 18 NFPDAYCNLANALKEKGQ---------------PNF----PDAYCNLANALKEKGQINVLHKPPYKYTRELAP---G--- 72 (673)
Q Consensus 18 ~~~~a~~~Lg~~~~~~g~---------------~~~----a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p---~--- 72 (673)
....++..+|.++...|+ ++. +..+..+|.++...|++++|.. .++.+..+.. +
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALE-YHHHDLTLARTIGDQLG 85 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHhccccHH
Confidence 456677888888888886 343 4678888999999999988875 3333333211 1
Q ss_pred ---chhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCC-CChhHHHH-HHHHHHcCC----------------
Q psy17691 73 ---NRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSP-DDGTTFSY-IISVLLLIQ---------------- 131 (673)
Q Consensus 73 ---~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p-~~~~~~~~-~~~~~~~g~---------------- 131 (673)
....++.++...++...+... ...++.......++ ....++.. +..+...|+
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~-------~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVC-------CQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEE 158 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHH-------HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHH-------HHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhh
Confidence 123455566665554333111 01111111110000 01223333 344556778
Q ss_pred ----HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHH
Q psy17691 132 ----VSEAEECYNTALRL------CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA------AAHSNLASVLQ 195 (673)
Q Consensus 132 ----~~~A~~~~~~al~~------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~------~~~~~la~~~~ 195 (673)
+++|+.++++++++ .+....++.++|.++..+|++++|+.++++++++.+... .++.++|.++.
T Consensus 159 a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 238 (406)
T 3sf4_A 159 VRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI 238 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 88888888888876 233456788888888888888888888888888765543 37888888888
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q psy17691 196 QQGKLTDALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSNLASIHK 263 (673)
Q Consensus 196 ~~g~~~eA~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~La~~~~ 263 (673)
..|++++|+.+|++++++.+.. ..++.++|.++..+|++++|+.+|++++++.+.. ..++.++|.++.
T Consensus 239 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~ 318 (406)
T 3sf4_A 239 FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYT 318 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 8888888888888888876655 6678888888888888888888888888875443 567788888888
Q ss_pred HcCCCc
Q psy17691 264 DSGKRG 269 (673)
Q Consensus 264 ~~g~~~ 269 (673)
..|+++
T Consensus 319 ~~g~~~ 324 (406)
T 3sf4_A 319 ALGNHD 324 (406)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 888865
No 110
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.56 E-value=6.5e-14 Score=125.68 Aligned_cols=111 Identities=23% Similarity=0.265 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF-------ADAY 221 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~~ 221 (673)
.+.++.++|..++++|+|++|+.+|+++++++|++..+|+++|.+|..+|++++|++.|+++++++|++ ..++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999998765 3588
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 222 SNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLAS 260 (673)
Q Consensus 222 ~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~ 260 (673)
.++|.++..+|++++|+++|+++++..|+ ++....|..
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~ 124 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHH
Confidence 99999999999999999999999999885 555555443
No 111
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.56 E-value=2.1e-13 Score=119.34 Aligned_cols=121 Identities=33% Similarity=0.527 Sum_probs=110.2
Q ss_pred CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 146 CPTH-ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNM 224 (673)
Q Consensus 146 ~p~~-~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 224 (673)
+|.. ..+++.+|.++...|++++|+..++++++.+|.+..++..+|.++...|++++|+..++++++.+|.+..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 4555 778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 225 GNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 225 g~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
|.++...|++++|+.+|+++++.+|++..++.+++.++...|
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999887765
No 112
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.56 E-value=1.3e-14 Score=132.64 Aligned_cols=119 Identities=14% Similarity=0.012 Sum_probs=103.8
Q ss_pred cCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy17691 112 LSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL 190 (673)
Q Consensus 112 l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 190 (673)
.+|++...+. .+..++..|++++|+..|+++++.+|+++.+|+.+|.++..+|++++|+.+|+++++++|+++.+++++
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 3455555543 445566788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
|.++...|++++|++.|+++++++|+++........+...
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 132 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAM 132 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 9999999999999999999999999887766555544433
No 113
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.55 E-value=2.3e-13 Score=142.48 Aligned_cols=138 Identities=12% Similarity=-0.014 Sum_probs=123.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH-------
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQ-G-YIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLT------- 201 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~-g-~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~------- 201 (673)
.+++++..+++++..+|++..+|+..+.++... + +++++++++.++++.+|.+..+|+..+.++...|+++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~ 183 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQW 183 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhH
Confidence 488899999999999999999999999999887 7 8899999999999999999999999999988888877
Q ss_pred -HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 202 -DALLHYKEAIRIQPSFADAYSNMGNTLKEMQD-------IQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 202 -eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-------~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
+++++++++++.+|.|..+|++++.++..+++ ++++++++++++.++|++..+|+++..++...|+.
T Consensus 184 ~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 184 GSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 89999999999999999999999999988887 78999999999999999999999988888887764
No 114
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.54 E-value=2e-14 Score=148.29 Aligned_cols=240 Identities=18% Similarity=0.146 Sum_probs=163.6
Q ss_pred CHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch
Q psy17691 1 LIDLAIDTYRRAIEL------QPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR 74 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l------~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~ 74 (673)
++++|+..+++++++ .|....++..+|.++...|+++.+..++..+..+.......... ....
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-----------~~~~ 126 (338)
T 3ro2_A 58 DYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGE-----------ARAL 126 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH-----------HHHH
T ss_pred CHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHH-----------HHHH
Confidence 478999999999987 55667899999999999998777777766665554332110000 0011
Q ss_pred hhhhhhhhhcCCCcccccccccCC------CCchhHHHHHHH------hc--CCCChhHH-HHHHHHHHcCCHHHHHHHH
Q psy17691 75 IRIGYVSSDFGNHPTSHLMQSVPG------MHNKSRVEIFCY------AL--SPDDGTTF-SYIISVLLLIQVSEAEECY 139 (673)
Q Consensus 75 ~~l~~~~~~l~~~~~a~~~~~~~~------~~~~~a~~~~~~------~l--~p~~~~~~-~~~~~~~~~g~~~~A~~~~ 139 (673)
..++.++...++............ .....++..+.. .. .+.....+ ..+..+...|++++|+.++
T Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 206 (338)
T 3ro2_A 127 YNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH 206 (338)
T ss_dssp HHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 233444444333100000000000 001122222211 11 11112334 3345566799999999999
Q ss_pred HHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 140 NTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLASVLQQQGKLTDALLHY 207 (673)
Q Consensus 140 ~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~eA~~~~ 207 (673)
+++++..+.. ..++..+|.++...|++++|+.++++++++.+.. ..++.++|.++...|++++|+.++
T Consensus 207 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 286 (338)
T 3ro2_A 207 EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYH 286 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999886543 3489999999999999999999999999987665 778999999999999999999999
Q ss_pred HHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 208 KEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 208 ~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
+++++..+.. ..++..+|.+|..+|++++|..+|++++++.+..
T Consensus 287 ~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 287 LKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 9999885542 5588999999999999999999999999987653
No 115
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.54 E-value=3e-13 Score=125.35 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=116.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 200 (673)
..+..++..|++++|+..|+++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..+++++|.++...|++
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~ 97 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKF 97 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccH
Confidence 44456677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHh
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGNT--LKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~eA~~~~~~Al~l 247 (673)
++|+.+|+++++.+|++..++..++.+ +...|++++|+..++++..+
T Consensus 98 ~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 98 RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 999999999999999999888555554 88899999999999987654
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.54 E-value=1.3e-14 Score=140.24 Aligned_cols=142 Identities=17% Similarity=0.138 Sum_probs=120.8
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA----------------AAHSNLA 191 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~----------------~~~~~la 191 (673)
..|++++|.+.++...+..+.....+..+|..+...|++++|+..|++++++.|.++ .++.++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 95 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLA 95 (198)
T ss_dssp ------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHH
Confidence 456777777777777776677788889999999999999999999999999988876 8899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
.++...|++++|+.+++++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.+++.++...++..
T Consensus 96 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 96 TCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888776543
No 117
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.54 E-value=2.1e-14 Score=132.68 Aligned_cols=111 Identities=15% Similarity=0.106 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPE-------FAA-----AHSNLASVLQQQGKLTDALLHYKEAIRI---- 213 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~-------~~~-----~~~~la~~~~~~g~~~eA~~~~~~al~~---- 213 (673)
+..+.++|..++..|+|++|+..|+++++++|+ +.. +|.|+|.++..+|++++|+.+|+++|++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456788888888899999999999999998888 444 9999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 214 ---QPSFADAY----SNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLAS 260 (673)
Q Consensus 214 ---~p~~~~~~----~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~ 260 (673)
+|++..+| +++|.++..+|++++|+.+|+++++++|++..+...+..
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~ 144 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKER 144 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 99999999 999999999999999999999999999887655444433
No 118
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=1.8e-13 Score=123.09 Aligned_cols=121 Identities=21% Similarity=0.145 Sum_probs=108.6
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 144 RLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSN 223 (673)
Q Consensus 144 ~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~ 223 (673)
..+|.++..+..+|.++...|++++|+.+|+++++.+|++..+++++|.++..+|++++|+..|+++++++|+++.++.+
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHH
Q psy17691 224 MGNTLKEMQDIQGALQCYSRAIQINPG-----FADAHSNLASIHKD 264 (673)
Q Consensus 224 lg~~~~~~g~~~eA~~~~~~Al~l~p~-----~~~a~~~La~~~~~ 264 (673)
+|.++..+|++++|+.+|+++++++|+ +..+...+..+...
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887 67777777666543
No 119
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.53 E-value=3.5e-15 Score=164.39 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=129.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF---------------AAAHSNLASV 193 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---------------~~~~~~la~~ 193 (673)
++++++|+..|+++++..|+.+.++.++|.+++.+|+|++|+..|+++++++|.+ ..+|+++|.+
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999999999999999999999999998 6899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
|.++|++++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.+++.++..+|+++
T Consensus 327 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 327 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998887754
No 120
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.2e-13 Score=121.23 Aligned_cols=111 Identities=17% Similarity=0.043 Sum_probs=104.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 200 (673)
..+..++..|++++|+..|+++++++|+++.++.++|.++..+|++++|+..|+++++++|++..+++++|.++..+|++
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~ 88 (126)
T 3upv_A 9 LEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 88 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCH
Confidence 44566778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHc
Q psy17691 201 TDALLHYKEAIRIQ------PSFADAYSNMGNTLKEM 231 (673)
Q Consensus 201 ~eA~~~~~~al~~~------p~~~~~~~~lg~~~~~~ 231 (673)
++|+..|+++++++ |++..++..++.+..++
T Consensus 89 ~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 89 ASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999998887653
No 121
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.52 E-value=4.5e-13 Score=116.04 Aligned_cols=114 Identities=17% Similarity=0.295 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
.+..++.+|.++...|++++|+..|+++++.+|.+..++.++|.++...|++++|+..++++++.+|++..++.++|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 229 KEMQDIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
..+|++++|+.+|+++++.+|++..++..++.+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999988775
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.51 E-value=1.1e-13 Score=139.51 Aligned_cols=153 Identities=27% Similarity=0.311 Sum_probs=130.1
Q ss_pred ChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------
Q psy17691 116 DGTTFSY-IISVLLLIQVSEAEECYNTALRLC--------PTHADSLNNLANIKREQGYIEEATRLYLKALEV------- 179 (673)
Q Consensus 116 ~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------- 179 (673)
...++.. +..+...|++++|+.+|+++++.. |....++..+|.++..+|++++|+.+|++++++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCC
Confidence 3445544 455667999999999999999883 556789999999999999999999999999998
Q ss_pred -CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy17691 180 -FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI--------QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI--- 247 (673)
Q Consensus 180 -~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l--- 247 (673)
+|....++.++|.++...|++++|+.+|++++++ .|....++.++|.++..+|++++|+.+|++++++
T Consensus 122 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 122 FHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4667889999999999999999999999999999 6777889999999999999999999999999987
Q ss_pred ------CCCCHHHHHHHHHHHHHcCCC
Q psy17691 248 ------NPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 248 ------~p~~~~a~~~La~~~~~~g~~ 268 (673)
.+.....+..++..+...+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T 3edt_B 202 KEFGSVNGDNKPIWMHAEEREESKDKR 228 (283)
T ss_dssp HHSSSCCSSCCCHHHHHHHHHHTTCCC
T ss_pred hcCCCcchhHHHHHHHHHHHHhcCCch
Confidence 444555666666665554443
No 123
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.51 E-value=8.5e-14 Score=148.82 Aligned_cols=212 Identities=17% Similarity=0.088 Sum_probs=155.8
Q ss_pred CHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch
Q psy17691 1 LIDLAIDTYRRAIELQ------PNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR 74 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~------P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~ 74 (673)
++++|+..|++|+++. +..+.++.++|.+|..+|+++.+..++..+..+......
T Consensus 116 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~------------------- 176 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL------------------- 176 (378)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT-------------------
T ss_pred CHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCC-------------------
Confidence 4778888888888763 234567777888888887766666666665554432110
Q ss_pred hhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCC-----
Q psy17691 75 IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPT----- 148 (673)
Q Consensus 75 ~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~----- 148 (673)
..+....++ ..+..+...|++++|+.+|++++++.+.
T Consensus 177 -------------------------------------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 219 (378)
T 3q15_A 177 -------------------------------------YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDR 219 (378)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -------------------------------------chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 000112233 3345566789999999999999987431
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC
Q psy17691 149 -HADSLNNLANIKREQGYIEEATRLYLKALE-----VFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ-----PSF 217 (673)
Q Consensus 149 -~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~-----~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~-----p~~ 217 (673)
...++.++|.+|..+|++++|+.+++++++ .+|....++.++|.++..+|++++|+.++++++++. +..
T Consensus 220 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 299 (378)
T 3q15_A 220 FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFY 299 (378)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 245788999999999999999999999999 677778899999999999999999999999999984 334
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 218 ADAYSNMGNTLKEMQD---IQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 218 ~~~~~~lg~~~~~~g~---~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
...+..++.++...++ +.+|+.++++. ...+.....+..+|.+|...|+++
T Consensus 300 ~~~~~~l~~ly~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~la~~y~~~g~~~ 353 (378)
T 3q15_A 300 KELFLFLQAVYKETVDERKIHDLLSYFEKK-NLHAYIEACARSAAAVFESSCHFE 353 (378)
T ss_dssp HHHHHHHHHHHSSSCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHHHCCCHH
Confidence 4566778888888888 78888887762 223344567788999999998875
No 124
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.51 E-value=1.1e-13 Score=123.15 Aligned_cols=100 Identities=13% Similarity=0.076 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 153 LNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ 232 (673)
Q Consensus 153 ~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g 232 (673)
++.+|..+.+.|++++|+..|+++++.+|++..+|+++|.++...|++++|+..|+++++++|++..++.++|.++..+|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHHHHHHhCCCCH
Q psy17691 233 DIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 233 ~~~eA~~~~~~Al~l~p~~~ 252 (673)
++++|+.+|+++++++|++.
T Consensus 100 ~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 100 NANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHhCcCCC
Confidence 77777777777777776654
No 125
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.51 E-value=5.5e-13 Score=138.10 Aligned_cols=162 Identities=8% Similarity=-0.035 Sum_probs=102.4
Q ss_pred HHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH----H
Q psy17691 123 IISVLLLIQ-VSEAEECYNTALRLCPTHADSLNNLANIKREQG--YIEEATRLYLKALEVFPEFAAAHSNLASVL----Q 195 (673)
Q Consensus 123 ~~~~~~~g~-~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g--~~~eA~~~~~~al~~~p~~~~~~~~la~~~----~ 195 (673)
.......|. .++|+.++.++|.++|++..+|+..+.++...+ +++++++++.+++..+|++..+|+..+.++ .
T Consensus 39 ~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~ 118 (306)
T 3dra_A 39 LLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIME 118 (306)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHH
Confidence 333344443 346666666666666666666666666666666 666666666666666666666666666666 4
Q ss_pred Hc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---
Q psy17691 196 QQ---GKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQ--GALQCYSRAIQINPGFADAHSNLASIHKDSGK--- 267 (673)
Q Consensus 196 ~~---g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~--- 267 (673)
.. ++++++++++.++++.+|++..+|+..+.++...|+++ ++++++.++++.+|.+..+|.+.+.+....|+
T Consensus 119 ~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~ 198 (306)
T 3dra_A 119 LNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLAT 198 (306)
T ss_dssp HTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCC
T ss_pred hccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccch
Confidence 44 56666666666666666666666666666666666666 66666666666666666666666666665554
Q ss_pred ---Cc---------cccCCCCHHHHHHHH
Q psy17691 268 ---RG---------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 268 ---~~---------l~l~p~~~~a~~~l~ 284 (673)
++ +..+|+|.++++.++
T Consensus 199 ~~~~~eEl~~~~~aI~~~p~n~SaW~y~~ 227 (306)
T 3dra_A 199 DNTIDEELNYVKDKIVKCPQNPSTWNYLL 227 (306)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCCccHHHHHH
Confidence 22 456666666665554
No 126
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.51 E-value=1.2e-13 Score=128.93 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEV------------------FPEFAAAHSNLASVLQQQGKLTDALLHYKEAI 211 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------------------~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al 211 (673)
+..+..+|..++..|++++|+..|++++++ +|.+..+++++|.++..+|++++|+..+++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567788888888888888888888888888 67777899999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcC
Q psy17691 212 RIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA-DAHSNLASIHKDSG 266 (673)
Q Consensus 212 ~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~-~a~~~La~~~~~~g 266 (673)
+++|+++.+++++|.+|..+|++++|+.+|+++++++|++. .+...++.+....+
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 66777777765543
No 127
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=4.6e-13 Score=121.54 Aligned_cols=120 Identities=18% Similarity=0.117 Sum_probs=105.5
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy17691 145 LCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF---AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAY 221 (673)
Q Consensus 145 ~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 221 (673)
.+|.+...++.+|..+...|++++|+.+|+++++.+|++ ..++.++|.++...|++++|+..++++++.+|++..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457788888899999999999999999999999988887 88889999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 222 SNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKD 264 (673)
Q Consensus 222 ~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~ 264 (673)
.++|.++..+|++++|+.+|+++++++|++..++..++.+...
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998888888777543
No 128
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.49 E-value=1.2e-13 Score=147.76 Aligned_cols=151 Identities=17% Similarity=0.124 Sum_probs=128.7
Q ss_pred hHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------
Q psy17691 118 TTFS-YIISVLLLIQVSEAEECYNTALRLCPTH-------ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------ 183 (673)
Q Consensus 118 ~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~-------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------ 183 (673)
.++. .+..+...|++++|+.++++++++.+.. ..++.++|.+|..+|++++|+.+|++++++.+..
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 3443 4455667999999999999999985433 4689999999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCH
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIR-----IQ-PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQIN-----PGFA 252 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~-----~~-p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~-----p~~~ 252 (673)
..++.++|.+|..+|++++|+.+|+++++ .+ |....++.++|.++..+|++++|+.++++++++. |...
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 303 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYL 303 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 35899999999999999999999999999 46 7788999999999999999999999999999983 3334
Q ss_pred HHHHHHHHHHHHcCCC
Q psy17691 253 DAHSNLASIHKDSGKR 268 (673)
Q Consensus 253 ~a~~~La~~~~~~g~~ 268 (673)
..+..++.++...|+.
T Consensus 304 ~~~~~l~~~~~~~~~~ 319 (383)
T 3ulq_A 304 SEFEFLKSLYLSGPDE 319 (383)
T ss_dssp HHHHHHHHHHTSSCCH
T ss_pred HHHHHHHHHHhCCCcH
Confidence 4467788898888873
No 129
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.48 E-value=8.4e-13 Score=116.76 Aligned_cols=119 Identities=32% Similarity=0.480 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
.+++.+|.++...|++++|+..++++++.+|.+..++..+|.++...|++++|+..++++++..|.+..++..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 231 MQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 231 ~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
.|++++|+.+++++++..|++..++..++.++...|+++
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 120 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD 120 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHH
Confidence 999999999999999999999999999999999999875
No 130
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.48 E-value=3.6e-13 Score=127.34 Aligned_cols=94 Identities=18% Similarity=0.124 Sum_probs=88.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANI-KREQGYI--EEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~-~~~~g~~--~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~ 205 (673)
.|++++|+.+|+++++++|+++.++..+|.+ +...|++ ++|+.+++++++.+|++..+++++|.++...|++++|+.
T Consensus 57 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 57 QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE 136 (177)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH
Confidence 4489999999999999999999999999999 8899999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHH
Q psy17691 206 HYKEAIRIQPSFADAYS 222 (673)
Q Consensus 206 ~~~~al~~~p~~~~~~~ 222 (673)
.|+++++.+|++.....
T Consensus 137 ~~~~al~~~p~~~~~~~ 153 (177)
T 2e2e_A 137 LWQKVMDLNSPRINRTQ 153 (177)
T ss_dssp HHHHHHHTCCTTSCHHH
T ss_pred HHHHHHhhCCCCccHHH
Confidence 99999999999865443
No 131
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.48 E-value=6.5e-13 Score=137.97 Aligned_cols=202 Identities=17% Similarity=0.131 Sum_probs=146.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCCcHHHHH-HHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhh
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKE-KGQPNFPDAYC-NLANALKEKGQINVLHKPPYKYTRELAPGNRIRIG 78 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~-~g~~~~a~a~~-~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~ 78 (673)
++++|.++++++.+..+.. ++. .++++.+..++ ..+.++...|++++|.. .+..+..+.+
T Consensus 6 ~~~eA~~~~~~a~k~~~~~----------~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~-~~~~al~~~~------- 67 (307)
T 2ifu_A 6 KISEAHEHIAKAEKYLKTS----------FMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKD-AYLQEAEAHA------- 67 (307)
T ss_dssp HHHHHHHHHHHHHHHHCCC----------SSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHHcccc----------ccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHH-------
Confidence 4789999999999876642 111 24444444333 34566777788777764 2222221110
Q ss_pred hhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCC------HH
Q psy17691 79 YVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYII-SVLLLIQVSEAEECYNTALRLCPTH------AD 151 (673)
Q Consensus 79 ~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~------~~ 151 (673)
..+. ......++..++ .+..+|++++|+.+|++++++.+.. ..
T Consensus 68 ----~~~~--------------------------~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~ 117 (307)
T 2ifu_A 68 ----NNRS--------------------------LFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAM 117 (307)
T ss_dssp ----HTTC--------------------------HHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHH
T ss_pred ----HcCC--------------------------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 0000 001123444444 4456899999999999999985432 56
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HH
Q psy17691 152 SLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF------AD 219 (673)
Q Consensus 152 a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~------~~ 219 (673)
++.++|.+|.. |++++|+.+|++++++.+.. ..++.++|.++..+|++++|+.+|++++++.+++ ..
T Consensus 118 ~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (307)
T 2ifu_A 118 ALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYK 196 (307)
T ss_dssp HHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHH
Confidence 88999999998 99999999999999987654 5789999999999999999999999999986543 34
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
++.++|.++..+|++++|+.+|++++ ++|++.
T Consensus 197 ~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 197 KCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 78899999999999999999999999 998764
No 132
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.47 E-value=4.1e-14 Score=155.82 Aligned_cols=132 Identities=11% Similarity=0.005 Sum_probs=114.3
Q ss_pred CCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17691 114 PDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTH---------------ADSLNNLANIKREQGYIEEATRLYLKAL 177 (673)
Q Consensus 114 p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~Lg~~~~~~g~~~eA~~~~~~al 177 (673)
|+....+ ..+..++..|++++|+.+|+++++++|++ ..+++++|.+|.++|++++|+.+|++++
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 344 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 344 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3444455 44556677999999999999999999998 7999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHH
Q psy17691 178 EVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQ-CYSRAI 245 (673)
Q Consensus 178 ~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~-~~~~Al 245 (673)
+++|++..+++++|.+|..+|++++|+..|+++++++|++..++.+++.++..++++++|.. .|++++
T Consensus 345 ~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 345 GLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998875 344443
No 133
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.47 E-value=8.7e-13 Score=122.19 Aligned_cols=120 Identities=19% Similarity=0.186 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLK 229 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 229 (673)
+..+..+|.++...|++++|+..|+++++.+|.+..++.++|.++...|++++|+..++++++.+|+++.++.++|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCCc
Q psy17691 230 EMQDIQGALQCYSRAIQINPGFADAHSNLASI--HKDSGKRG 269 (673)
Q Consensus 230 ~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~--~~~~g~~~ 269 (673)
.+|++++|+.+|+++++++|++..++..++.+ +...|+++
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~ 134 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFE 134 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988665555 66666554
No 134
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=6.3e-13 Score=118.11 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=111.1
Q ss_pred CCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy17691 114 PDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLAS 192 (673)
Q Consensus 114 p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~ 192 (673)
|.....+.. +..++..|++++|+.+|+++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..+++++|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 445555544 4556679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 193 VLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQD 233 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 233 (673)
++...|++++|+++|+++++.+|++..++..++.++..+|+
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999988774
No 135
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.47 E-value=6.3e-13 Score=124.22 Aligned_cols=114 Identities=20% Similarity=0.145 Sum_probs=104.0
Q ss_pred ChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy17691 116 DGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVL 194 (673)
Q Consensus 116 ~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~ 194 (673)
....+ ..+..++..|++++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..+|+++|.++
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34445 44556678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 195 QQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLK 229 (673)
Q Consensus 195 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 229 (673)
..+|++++|+.+|+++++++|++..++.+++....
T Consensus 90 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999999999988777765543
No 136
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.47 E-value=1.5e-12 Score=114.82 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=110.7
Q ss_pred ChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy17691 116 DGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVL 194 (673)
Q Consensus 116 ~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~ 194 (673)
....+ ..+..+...|++++|+..|+++++.+|++..++..+|.++...|++++|+.+++++++.+|++..+++.+|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLAL 90 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHH
Confidence 34444 34455667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 195 QQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDI 234 (673)
Q Consensus 195 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 234 (673)
...|++++|+..|+++++.+|++..++..+|.++..+|++
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999998875
No 137
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.45 E-value=1.9e-12 Score=114.93 Aligned_cols=116 Identities=17% Similarity=0.173 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHH
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEFA---AAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF---ADAYSNM 224 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~---~~~~~~l 224 (673)
.+++.+|.++...|++++|+..|+++++.+|++. .+++.+|.++...|++++|+..|+++++.+|++ +.+++++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3467888888899999999999999998888887 788889999999999999999999999998888 8888999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 225 GNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 225 g~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
|.++..+|++++|+.+|+++++..|++..+...+..+..-.+
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 999999999999999999999999988877766665544433
No 138
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.45 E-value=9.8e-13 Score=128.97 Aligned_cols=156 Identities=18% Similarity=0.107 Sum_probs=136.1
Q ss_pred HHHHHHHhcCCCChhHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHh
Q psy17691 104 RVEIFCYALSPDDGTTFSYIIS-VLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQG----YIEEATRLYLKALE 178 (673)
Q Consensus 104 a~~~~~~~l~p~~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g----~~~eA~~~~~~al~ 178 (673)
++..+....+..++.++..++. +...+++++|+.+|+++++. .++.++++||.+|.. + ++++|+.+|+++.+
T Consensus 5 A~~~~~~aa~~g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~ 81 (212)
T 3rjv_A 5 PGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE 81 (212)
T ss_dssp TTHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH
Confidence 3444545555677777766554 45689999999999999875 689999999999998 7 99999999999965
Q ss_pred hCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Q psy17691 179 VFPEFAAAHSNLASVLQQ----QGKLTDALLHYKEAIRIQP--SFADAYSNMGNTLKE----MQDIQGALQCYSRAIQIN 248 (673)
Q Consensus 179 ~~p~~~~~~~~la~~~~~----~g~~~eA~~~~~~al~~~p--~~~~~~~~lg~~~~~----~g~~~eA~~~~~~Al~l~ 248 (673)
++++.++++||.+|.. .+++++|+++|+++++..+ +++.++++||.+|.. .+++++|+.+|+++++.
T Consensus 82 --~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~- 158 (212)
T 3rjv_A 82 --AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL- 158 (212)
T ss_dssp --TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-
T ss_pred --CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-
Confidence 6789999999999998 8999999999999999988 358999999999999 89999999999999998
Q ss_pred CCCHHHHHHHHHHHHHc
Q psy17691 249 PGFADAHSNLASIHKDS 265 (673)
Q Consensus 249 p~~~~a~~~La~~~~~~ 265 (673)
++++.++++||.+|...
T Consensus 159 ~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 159 SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp SCTTHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 77788999999999765
No 139
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.44 E-value=1e-12 Score=116.07 Aligned_cols=118 Identities=20% Similarity=0.216 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHH
Q psy17691 148 THADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF-------ADA 220 (673)
Q Consensus 148 ~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~ 220 (673)
+.+..++.+|.++...|++++|+.+|+++++.+|.+..+++++|.++...|++++|+.+|+++++..|++ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3467788999999999999999999999999999999999999999999999999999999999998877 889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 221 YSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 221 ~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
+.++|.++..+|++++|+.+|+++++..| +...+..++.+....+
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 5888888888776554
No 140
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.44 E-value=6.2e-12 Score=131.05 Aligned_cols=164 Identities=15% Similarity=0.060 Sum_probs=139.7
Q ss_pred hhHHHHH--HHhcCCCChhHHHHHHHHHH-cCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--H
Q psy17691 102 KSRVEIF--CYALSPDDGTTFSYIISVLL-LIQ----------VSEAEECYNTALRLCPTHADSLNNLANIKREQGY--I 166 (673)
Q Consensus 102 ~~a~~~~--~~~l~p~~~~~~~~~~~~~~-~g~----------~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~--~ 166 (673)
.++++.. .+.++|++..+|..-+.++. .+. +++++.++++++..+|++..+|+..+.++...++ +
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccH
Confidence 3445443 56788999999866655443 443 7899999999999999999999999999999984 8
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------
Q psy17691 167 EEATRLYLKALEVFPEFAAAHSNLASVLQQQGK-LTDALLHYKEAIRIQPSFADAYSNMGNTLKEM-------------- 231 (673)
Q Consensus 167 ~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~-~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~-------------- 231 (673)
++++.++.++++.+|.+..+|.+.+.++...|. ++++++++.++++.+|.+..+|++++.++...
T Consensus 127 ~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~ 206 (331)
T 3dss_A 127 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPE 206 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccch
Confidence 999999999999999999999999999999998 69999999999999999999999999999887
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 232 QDIQGALQCYSRAIQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 232 g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~ 265 (673)
+.++++++++.+++..+|++..+|+.+..++...
T Consensus 207 ~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~ 240 (331)
T 3dss_A 207 NVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAG 240 (331)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 5688999999999999999999998666555444
No 141
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.43 E-value=1.8e-12 Score=135.70 Aligned_cols=171 Identities=9% Similarity=0.045 Sum_probs=155.0
Q ss_pred CCChhHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy17691 114 PDDGTTFSYIISVLLL-IQVSEAEECYNTALRLCPTHADSLNNLANIKREQG-YIEEATRLYLKALEVFPEFAAAHSNLA 191 (673)
Q Consensus 114 p~~~~~~~~~~~~~~~-g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g-~~~eA~~~~~~al~~~p~~~~~~~~la 191 (673)
++...++.+....+.. +..++|+.++.+++.++|++..+|+..+.++...| .++++++.+++++..+|++..+|+..+
T Consensus 51 ~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~ 130 (349)
T 3q7a_A 51 EEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRL 130 (349)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 3445566666666654 46689999999999999999999999999999999 599999999999999999999999999
Q ss_pred HHHHHc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 192 SVLQQQ-G-KLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQ--------GALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 192 ~~~~~~-g-~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
.++... + +++++++++.++++.+|++..+|...+.++.+.|+++ +++++++++++.+|.|..+|.+.+.+
T Consensus 131 wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~l 210 (349)
T 3q7a_A 131 LLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYL 210 (349)
T ss_dssp HHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999998 8 9999999999999999999999999999999999888 99999999999999999999999999
Q ss_pred HHHcCCC-------c---------cccCCCCHHHHHHHH
Q psy17691 262 HKDSGKR-------G---------FFIRTDLNSAYFWLL 284 (673)
Q Consensus 262 ~~~~g~~-------~---------l~l~p~~~~a~~~l~ 284 (673)
+...++. + +.++|++.++++++.
T Consensus 211 L~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr 249 (349)
T 3q7a_A 211 RVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLR 249 (349)
T ss_dssp HTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 9998873 2 778999999997754
No 142
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.43 E-value=5.1e-13 Score=114.69 Aligned_cols=106 Identities=15% Similarity=0.135 Sum_probs=98.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHH
Q psy17691 146 CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS--FADAYSN 223 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~--~~~~~~~ 223 (673)
+|++..++..+|.++...|++++|+.+|+++++.+|.+..++.++|.++...|++++|++.|+++++.+|+ +..++.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHc-CCHHHHHHHHHHHHHhCCCC
Q psy17691 224 MGNTLKEM-QDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 224 lg~~~~~~-g~~~eA~~~~~~Al~l~p~~ 251 (673)
+|.++..+ |++++|++++++++...|++
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999 99999999999999998875
No 143
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.43 E-value=5.4e-13 Score=136.93 Aligned_cols=166 Identities=15% Similarity=0.012 Sum_probs=123.9
Q ss_pred CChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy17691 115 DDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASV 193 (673)
Q Consensus 115 ~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~ 193 (673)
+....+ ..+..++..|++++|+..|+++++.+|+++.++.++|.+|..+|++++|+..++++++++|++..+++++|.+
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 344444 4456667799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCCC
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKD-----SGKR 268 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~-----~g~~ 268 (673)
+..+|++++|+..|+++++++|++...+........ +..++..+........+.+..+...++.++.. ...+
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~ 158 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL---RIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEEC 158 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH---HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998876432222222222 22333444444445667777776666665421 1222
Q ss_pred c--cccCCCCHHHHHHH
Q psy17691 269 G--FFIRTDLNSAYFWL 283 (673)
Q Consensus 269 ~--l~l~p~~~~a~~~l 283 (673)
+ ++++|++......+
T Consensus 159 ~~al~~~p~~~~~~~~l 175 (281)
T 2c2l_A 159 QRNHEGHEDDGHIRAQQ 175 (281)
T ss_dssp SGGGTTTSCHHHHTHHH
T ss_pred HhhhccccchhhhhhHH
Confidence 2 66778766544333
No 144
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.43 E-value=5.1e-12 Score=130.08 Aligned_cols=149 Identities=11% Similarity=-0.006 Sum_probs=129.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHA------DSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHS 188 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~ 188 (673)
..+..+...|++++|+..++++++..+... ..++.+|.++...|++++|+.+++++++..+.. ..+++
T Consensus 80 ~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 159 (293)
T 2qfc_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 445667789999999999999999987754 346778999999999999999999999876544 66899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHH
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAI---RIQPSFA----DAYSNMGNTLKEMQDIQGALQCYSRAIQINPG------FADAH 255 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al---~~~p~~~----~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~------~~~a~ 255 (673)
++|.+|..+|++++|+.+|++++ +..+++. .+++++|.+|..+|++++|+.+|++++++.++ ...++
T Consensus 160 ~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~ 239 (293)
T 2qfc_A 160 AIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLY 239 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 99999999999999999999999 5566643 68999999999999999999999999988543 27889
Q ss_pred HHHHHHHHHcCCCc
Q psy17691 256 SNLASIHKDSGKRG 269 (673)
Q Consensus 256 ~~La~~~~~~g~~~ 269 (673)
+++|.++..+|+++
T Consensus 240 ~~lg~~y~~~g~~~ 253 (293)
T 2qfc_A 240 YQRGECLRKLEYEE 253 (293)
T ss_dssp HHHHHHHHHTTCCH
T ss_pred HHHHHHHHHcCCcH
Confidence 99999999999976
No 145
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.43 E-value=7.3e-12 Score=109.34 Aligned_cols=116 Identities=32% Similarity=0.402 Sum_probs=107.9
Q ss_pred hhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy17691 117 GTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQ 195 (673)
Q Consensus 117 ~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~ 195 (673)
...+. .+..+...|++++|+..|+++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..++.++|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 44554 44556679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 196 QQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ 232 (673)
Q Consensus 196 ~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g 232 (673)
..|++++|+..++++++.+|++..++.++|.++..+|
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999988765
No 146
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.43 E-value=1.8e-12 Score=125.12 Aligned_cols=125 Identities=15% Similarity=0.060 Sum_probs=110.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHA----------------DSLNNLANIKREQGYIEEATRLYLKALEVFPEFA 184 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~----------------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 184 (673)
..+..++..|++++|+.+|++++++.|+++ .++.++|.++..+|++++|+.+++++++++|++.
T Consensus 43 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 122 (198)
T 2fbn_A 43 EEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNV 122 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccH
Confidence 445566789999999999999999999887 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGAL-QCYSRAI 245 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~-~~~~~Al 245 (673)
.+++++|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++. ..|.+.+
T Consensus 123 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 123 KALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888877 4444443
No 147
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.43 E-value=4.6e-12 Score=130.39 Aligned_cols=124 Identities=21% Similarity=0.240 Sum_probs=108.5
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCCH----HHHHHHH
Q psy17691 125 SVLLLIQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKAL---EVFPEFA----AAHSNLA 191 (673)
Q Consensus 125 ~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al---~~~p~~~----~~~~~la 191 (673)
.+...|++++|+.+|+++++..+.. ..+++++|.+|..+|++++|+.+|++++ +..|++. .+++++|
T Consensus 124 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg 203 (293)
T 2qfc_A 124 YVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHA 203 (293)
T ss_dssp HHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHH
Confidence 3445789999999999999876544 6689999999999999999999999999 4566643 6899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQPS------FADAYSNMGNTLKEMQDIQGA-LQCYSRAIQIN 248 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~eA-~~~~~~Al~l~ 248 (673)
.+|..+|++++|+.++++++++.++ ...+++++|.+|..+|++++| ..+|++|+.+.
T Consensus 204 ~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 204 KALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999988543 278999999999999999999 88899998763
No 148
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.43 E-value=3.9e-13 Score=123.96 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=50.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIE----------EATRLYLKALEVFPEFAAAHSNLASVLQQQG 198 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~----------eA~~~~~~al~~~p~~~~~~~~la~~~~~~g 198 (673)
.+++++|+..++++++++|+++++|+++|.++...++++ +|+..|+++++++|++..+|+++|.+|..+|
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 347899999999999999999999999999998888765 5555555555555555555555555555543
No 149
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.43 E-value=7.9e-13 Score=127.95 Aligned_cols=155 Identities=9% Similarity=0.026 Sum_probs=124.1
Q ss_pred ccccccCCCCCcEEEecCCc---ccccChhhHHHHHHHH--hcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhh
Q psy17691 464 TSRQQYGLPEDAIVYCNFNQ---LYKIDPSTLQMWVNVL--KAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIV 538 (673)
Q Consensus 464 ~~r~~~~l~~~~~~~~~~~~---~~K~~~~~~~~~~~il--~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (673)
..|+++|++.+. +++++++ ..|..+.++++|.++. +..|+.+|+++|
T Consensus 26 ~~r~~~~~~~~~-~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G--------------------------- 77 (200)
T 2bfw_A 26 SLLSKFGMDEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG--------------------------- 77 (200)
T ss_dssp HHHHHTTCCSCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEEC---------------------------
T ss_pred HHHHHcCCCCCC-EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEEC---------------------------
Confidence 467889998765 5555565 4589999999999998 888999999988
Q ss_pred hhccCchhhhhccCChh--hhhhHHHHHHHcCCCCCeEEe-ccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcC
Q psy17691 539 LKAVPNSILWLLKFPAV--GEANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTG 614 (673)
Q Consensus 539 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~rv~~-~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~G 614 (673)
.+. ..+.+++.+.+.| +|+| .|.++.++....|+.+|+++-|. ..+.|++++|||++|
T Consensus 78 --------------~~~~~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 78 --------------KGDPELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp --------------CBCHHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred --------------CCChHHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 223 4567888888887 8999 99999999999999999998876 446699999999999
Q ss_pred CceeecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC-CHHHHHHHHhhh
Q psy17691 615 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT-DRDYCEKALLYH 671 (673)
Q Consensus 615 vPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~-d~~~~~~~~~~~ 671 (673)
+|||+-....+. .++ -|-..++.. |.+++++...++.+ |++.+.+++...
T Consensus 140 ~PvI~~~~~~~~-----e~~--~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a 192 (200)
T 2bfw_A 140 AIPIASAVGGLR-----DII--TNETGILVKAGDPGELANAILKALELSRSDLSKFRENC 192 (200)
T ss_dssp CEEEEESCHHHH-----HHC--CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CCEEEeCCCChH-----HHc--CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999997542211 122 255556654 89999999999999 999999887654
No 150
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.42 E-value=1.4e-12 Score=147.06 Aligned_cols=162 Identities=12% Similarity=0.013 Sum_probs=149.1
Q ss_pred HHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy17691 127 LLLI-QVSEAEECYNTALRLCPTHADSLNNLANIKREQGY----------IEEATRLYLKALEVFPEFAAAHSNLASVLQ 195 (673)
Q Consensus 127 ~~~g-~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~----------~~eA~~~~~~al~~~p~~~~~~~~la~~~~ 195 (673)
...| ..++|+..++++++.+|++..+|+..+.++...|+ +++|+++++++++.+|++..+|+..+.++.
T Consensus 39 ~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~ 118 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3444 45788999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC----
Q psy17691 196 QQG--KLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ-DIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR---- 268 (673)
Q Consensus 196 ~~g--~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~---- 268 (673)
..+ ++++|++++.++++.+|.+..+|...+.++...| .++++++++.++++.+|++..+|.+.+.++...++.
T Consensus 119 ~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~ 198 (567)
T 1dce_A 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSG 198 (567)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSS
T ss_pred HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccc
Confidence 999 7799999999999999999999999999999999 999999999999999999999999999999886322
Q ss_pred ----------c---------cccCCCCHHHHHHHHHHhh
Q psy17691 269 ----------G---------FFIRTDLNSAYFWLLLLDA 288 (673)
Q Consensus 269 ----------~---------l~l~p~~~~a~~~l~~~~~ 288 (673)
+ +.++|++..+|+.++.+..
T Consensus 199 ~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~ 237 (567)
T 1dce_A 199 PQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237 (567)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHS
T ss_pred ccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHh
Confidence 1 6789999999998875543
No 151
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.42 E-value=1.1e-12 Score=116.43 Aligned_cols=101 Identities=19% Similarity=0.168 Sum_probs=90.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q psy17691 119 TFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG 198 (673)
Q Consensus 119 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g 198 (673)
.+..+..++..|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+..|+++++++|++..+++++|.++...|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 44566777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHH
Q psy17691 199 KLTDALLHYKEAIRIQPSFAD 219 (673)
Q Consensus 199 ~~~eA~~~~~~al~~~p~~~~ 219 (673)
++++|+..|+++++++|++..
T Consensus 100 ~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 100 NANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999998653
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.42 E-value=1.9e-12 Score=133.36 Aligned_cols=122 Identities=20% Similarity=0.231 Sum_probs=105.5
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCCHHHHHHHHH
Q psy17691 126 VLLLIQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKALEVF-------PEFAAAHSNLAS 192 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~-------p~~~~~~~~la~ 192 (673)
+...+++++|+.+|+++++..+.. ..++.++|.+|..+|++++|+.+|+++++.. +....+++++|.
T Consensus 125 ~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~ 204 (293)
T 3u3w_A 125 VLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAK 204 (293)
T ss_dssp HTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 344679999999999999975433 3479999999999999999999999999632 223568999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Q psy17691 193 VLQQQGKLTDALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQ-DIQGALQCYSRAIQI 247 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~lg~~~~~~g-~~~eA~~~~~~Al~l 247 (673)
+|..+|++++|+.++++++++.+.. +.+++++|.+|..+| .+++|+++|++|+.+
T Consensus 205 ~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 205 ALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999986443 789999999999999 579999999999976
No 153
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=2.6e-12 Score=124.71 Aligned_cols=124 Identities=15% Similarity=0.097 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
..++++|.++...|++++|+..|++++ +| ++.+++++|.++...|++++|+..|+++++++|++..+++++|.++..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 457889999999999999999999995 33 789999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCCc---------cccCCCCH
Q psy17691 231 MQDIQGALQCYSRAIQINPGFA----------------DAHSNLASIHKDSGKRG---------FFIRTDLN 277 (673)
Q Consensus 231 ~g~~~eA~~~~~~Al~l~p~~~----------------~a~~~La~~~~~~g~~~---------l~l~p~~~ 277 (673)
+|++++|+.+|++++++.|++. .+++++|.++...|+++ +.++|++.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999888776 99999999999999987 55666553
No 154
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.41 E-value=6.2e-13 Score=122.87 Aligned_cols=108 Identities=17% Similarity=0.090 Sum_probs=97.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh-------C
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCPT-------HAD-----SLNNLANIKREQGYIEEATRLYLKALEV-------F 180 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~-------~~~-----a~~~Lg~~~~~~g~~~eA~~~~~~al~~-------~ 180 (673)
...+..++..|++++|+.+|+++++++|+ +.. +|.++|.++..+|++++|+.+|++++++ +
T Consensus 15 ~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~ 94 (159)
T 2hr2_A 15 LSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELN 94 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCC
Confidence 35566777899999999999999999999 544 9999999999999999999999999999 9
Q ss_pred CCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 181 PEFAAAH----SNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNT 227 (673)
Q Consensus 181 p~~~~~~----~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 227 (673)
|++..+| +++|.++..+|++++|+..|+++++++|++......+..+
T Consensus 95 pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~ 145 (159)
T 2hr2_A 95 QDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERM 145 (159)
T ss_dssp STHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHH
T ss_pred CchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999886655544443
No 155
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.41 E-value=3e-12 Score=114.92 Aligned_cols=121 Identities=18% Similarity=0.093 Sum_probs=107.3
Q ss_pred CCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy17691 113 SPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLA 191 (673)
Q Consensus 113 ~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la 191 (673)
++.....+. .+..++..|++++|+.+|+++++.+|++..++.++|.++..+|++++|+..++++++++|++..+++++|
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 455566664 4556677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCC
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQPS-----FADAYSNMGNTLKEMQD 233 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p~-----~~~~~~~lg~~~~~~g~ 233 (673)
.++...|++++|+..|+++++++|+ +..+...+..+..+...
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 67777777776655433
No 156
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.41 E-value=7.4e-13 Score=122.07 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=92.5
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 161 REQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL----------TDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 161 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~----------~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
.+.++|++|++.++++++++|+++++|+++|.++..++++ ++|+..|+++++++|++.++|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998875 599999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 231 MQ-----------DIQGALQCYSRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 231 ~g-----------~~~eA~~~~~~Al~l~p~~~~a~~~La~~ 261 (673)
+| ++++|+++|++|++++|++...+.++..+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 85 89999999999999999998777766443
No 157
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.41 E-value=3.4e-12 Score=114.33 Aligned_cols=104 Identities=21% Similarity=0.199 Sum_probs=93.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF-------AAAHSNLASV 193 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~~~~la~~ 193 (673)
..+..++..|++++|+.+|+++++++|+++.++.++|.+|..+|++++|+..++++++++|++ ..++.++|.+
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~ 92 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNA 92 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHH
Confidence 345667789999999999999999999999999999999999999999999999999998876 4589999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMG 225 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg 225 (673)
+..+|++++|+++|+++++..|+ ++....+.
T Consensus 93 ~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 93 FQKQNDLSLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 99999999999999999999886 55554443
No 158
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.40 E-value=1.2e-12 Score=135.83 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=126.7
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHH
Q psy17691 124 ISVLLLIQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLA 191 (673)
Q Consensus 124 ~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la 191 (673)
..+...|++++|+.+|++++++.+.. ..++.++|.+|..+|++++|+.+|++++++.+.. ..++.++|
T Consensus 44 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg 123 (307)
T 2ifu_A 44 VAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAG 123 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34556899999999999999986533 5689999999999999999999999999985432 56889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHH
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQPSF------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSNLA 259 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~La 259 (673)
.+|.. |++++|+.+|++++++.+.. ..++.++|.+|..+|++++|+.+|++++++.|++ ..++.+++
T Consensus 124 ~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g 202 (307)
T 2ifu_A 124 KLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQV 202 (307)
T ss_dssp HHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Confidence 99998 99999999999999987654 5789999999999999999999999999986644 34788899
Q ss_pred HHHHHcCCCc
Q psy17691 260 SIHKDSGKRG 269 (673)
Q Consensus 260 ~~~~~~g~~~ 269 (673)
.++..+|+++
T Consensus 203 ~~~~~~g~~~ 212 (307)
T 2ifu_A 203 LVQLHRADYV 212 (307)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999999987
No 159
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.40 E-value=1.8e-12 Score=120.90 Aligned_cols=115 Identities=17% Similarity=0.057 Sum_probs=104.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRL------------------CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 182 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~------------------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~ 182 (673)
..+..++..|++++|+..|++++++ +|.+..++.++|.+|..+|++++|+..++++++++|+
T Consensus 16 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 95 (162)
T 3rkv_A 16 QKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET 95 (162)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc
Confidence 4566778899999999999999999 7777889999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCHH
Q psy17691 183 FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFA-DAYSNMGNTLKEMQDIQ 235 (673)
Q Consensus 183 ~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~-~~~~~lg~~~~~~g~~~ 235 (673)
+..+++++|.++..+|++++|+..|+++++++|++. .+...++.+....++..
T Consensus 96 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 96 NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 67778888776654443
No 160
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.40 E-value=3.6e-13 Score=149.01 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=114.5
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 126 VLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~ 205 (673)
++..|++++|+.+|+++++++|++..++.++|.+|.++|++++|++.|+++++++|++..+++++|.+|..+|++++|++
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~ 95 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALR 95 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHHhCCCC
Q psy17691 206 HYKEAIRIQPSFADAYSNMGNT--LKEMQDIQGALQCYS-----------RAIQINPGF 251 (673)
Q Consensus 206 ~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~eA~~~~~-----------~Al~l~p~~ 251 (673)
.|+++++++|++..++.+++.+ +.++|++++|++.++ ++++++|++
T Consensus 96 ~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 96 DYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999999999999 889999999999999 777777654
No 161
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=1e-11 Score=107.40 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=103.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 200 (673)
..+..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++.++|.++...|++
T Consensus 9 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 88 (118)
T 1elw_A 9 EKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRF 88 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhH
Confidence 44556677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGNTLK 229 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 229 (673)
++|++.|+++++.+|++..++..++.+..
T Consensus 89 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 89 EEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999988753
No 162
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.39 E-value=2e-11 Score=129.48 Aligned_cols=212 Identities=16% Similarity=0.032 Sum_probs=143.6
Q ss_pred CHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchh
Q psy17691 1 LIDLAIDTYRRAIELQPNFP-----DAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRI 75 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~-----~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~ 75 (673)
++++|+..++++++..|.+. .++..+|.++...|+++.+..++..+...........
T Consensus 29 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~------------------ 90 (373)
T 1hz4_A 29 NPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH------------------ 90 (373)
T ss_dssp CHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH------------------
T ss_pred CHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHH------------------
Confidence 47889999999999887653 2567778888888876666666555544432210000
Q ss_pred hhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhC--------
Q psy17691 76 RIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLC-------- 146 (673)
Q Consensus 76 ~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~-------- 146 (673)
....++ ..+..+...|++++|+.+++++++..
T Consensus 91 ---------------------------------------~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 91 ---------------------------------------YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred ---------------------------------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 000111 23344556888888888888888864
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C-H
Q psy17691 147 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF-----AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS--F-A 218 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-----~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~--~-~ 218 (673)
|....++.++|.++...|++++|..+++++++..+.. ..++.++|.++...|++++|...+++++++.+. . .
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~ 211 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHS 211 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCH
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcch
Confidence 2345567778888888888888888888888877652 456778888888888888888888888876322 2 1
Q ss_pred HHHH----HHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCCc
Q psy17691 219 DAYS----NMGNTLKEMQDIQGALQCYSRAIQINPGF----ADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 219 ~~~~----~lg~~~~~~g~~~eA~~~~~~Al~l~p~~----~~a~~~La~~~~~~g~~~ 269 (673)
.... .++.++...|++++|..+++++++..+.. ...+.+++.++...|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 270 (373)
T 1hz4_A 212 DWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFE 270 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHH
Confidence 1111 34455778888888888888888766543 335677788888888765
No 163
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.38 E-value=3.4e-12 Score=136.31 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=125.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPT-------HADSLNNLANIKREQGYIEEATRLYLKALEVFPE------FAAAH 187 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~-------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~~~ 187 (673)
..+..+...|++++|+.++++++++.+. ...++.++|.+|..+|++++|+++|++++++.+. ...++
T Consensus 146 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 225 (378)
T 3q15_A 146 KVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISL 225 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3345566799999999999999998543 2558899999999999999999999999997432 25689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCHHHHHH
Q psy17691 188 SNLASVLQQQGKLTDALLHYKEAIR-----IQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP-----GFADAHSN 257 (673)
Q Consensus 188 ~~la~~~~~~g~~~eA~~~~~~al~-----~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p-----~~~~a~~~ 257 (673)
.++|.++..+|++++|+.+|+++++ .+|....++.++|.++..+|++++|+.++++++++.+ .....+..
T Consensus 226 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 305 (378)
T 3q15_A 226 LNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLF 305 (378)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999 7788889999999999999999999999999999843 34455666
Q ss_pred HHHHHHHcCC
Q psy17691 258 LASIHKDSGK 267 (673)
Q Consensus 258 La~~~~~~g~ 267 (673)
++.++...|+
T Consensus 306 l~~ly~~~~~ 315 (378)
T 3q15_A 306 LQAVYKETVD 315 (378)
T ss_dssp HHHHHSSSCC
T ss_pred HHHHHhCCCc
Confidence 7777766665
No 164
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.37 E-value=1.3e-12 Score=114.94 Aligned_cols=91 Identities=18% Similarity=0.145 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy17691 130 IQVSEAEECYNTALRL---CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLH 206 (673)
Q Consensus 130 g~~~~A~~~~~~al~~---~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~ 206 (673)
|++++|+.+|++++++ +|++..++.++|.+|..+|++++|+.+|+++++.+|+++.+++++|.++...|++++|+..
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 83 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVEL 83 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHH
Confidence 4444555555555554 3444444555555555555555555555555555555544555555555555555555555
Q ss_pred HHHHHHhCCCCHHH
Q psy17691 207 YKEAIRIQPSFADA 220 (673)
Q Consensus 207 ~~~al~~~p~~~~~ 220 (673)
|+++++..|+++..
T Consensus 84 ~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 84 LLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHCCCHHH
T ss_pred HHHHHHhCCCcHHH
Confidence 55555444444433
No 165
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.35 E-value=7.2e-12 Score=128.95 Aligned_cols=146 Identities=12% Similarity=-0.004 Sum_probs=124.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHH
Q psy17691 123 IISVLLLIQVSEAEECYNTALRLCPTHAD------SLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNL 190 (673)
Q Consensus 123 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~------a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~l 190 (673)
+..++..|++++|+..++++++..+..+. .+..+|.++...+++++|+.+|++++++.+.. ..++.++
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 45667799999999999999998877655 34468999999999999999999999975443 3479999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q psy17691 191 ASVLQQQGKLTDALLHYKEAIRIQ-------PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSN 257 (673)
Q Consensus 191 a~~~~~~g~~~eA~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~ 257 (673)
|.+|..+|++++|+.+|+++++.. +....+++++|.+|..+|++++|+.++++++++.+.. ..++.+
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 999999999999999999999642 2234589999999999999999999999999986443 789999
Q ss_pred HHHHHHHcCCC
Q psy17691 258 LASIHKDSGKR 268 (673)
Q Consensus 258 La~~~~~~g~~ 268 (673)
+|.++..+|+.
T Consensus 242 lg~~~~~~g~~ 252 (293)
T 3u3w_A 242 RGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHhCCc
Confidence 99999999963
No 166
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.35 E-value=3.6e-12 Score=136.18 Aligned_cols=119 Identities=19% Similarity=0.225 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALE----------------VFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI 213 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~----------------~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~ 213 (673)
+..+..+|..+...|++++|+..|+++++ .+|.+..+++++|.++..+|++++|+++|++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 34577778888888888888888888877 66677788888888888888888888888888888
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 214 QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 214 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
+|+++.+++++|.+|..+|++++|+.+|+++++++|++..++..++.++...+++
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888888888888888888888888888888877766554
No 167
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.35 E-value=1.1e-12 Score=115.37 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=94.0
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q psy17691 162 EQGYIEEATRLYLKALEV---FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGAL 238 (673)
Q Consensus 162 ~~g~~~eA~~~~~~al~~---~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~ 238 (673)
.+|++++|+.+|++++++ +|++..+++++|.++..+|++++|+..|+++++++|+++.++.++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q psy17691 239 QCYSRAIQINPGFADAHSNLASIHKDSGKR 268 (673)
Q Consensus 239 ~~~~~Al~l~p~~~~a~~~La~~~~~~g~~ 268 (673)
.+|+++++..|+++........+....+.+
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~~~~~~l 111 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAILFYADKL 111 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHHHHTTCT
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999998876665555544443
No 168
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.35 E-value=3.2e-11 Score=106.90 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=102.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHH
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCPTHA---DSLNNLANIKREQGYIEEATRLYLKALEVFPEF---AAAHSNLASV 193 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---~~~~~~la~~ 193 (673)
+..+..++..|++++|+..|+++++.+|++. .+++.+|.++..+|++++|+..|+++++.+|++ +.+++++|.+
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 4456677789999999999999999999998 899999999999999999999999999999999 8999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQD 233 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 233 (673)
+..+|++++|+..|+++++..|++..+...+..+-...++
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998877766665554443
No 169
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.7e-11 Score=111.10 Aligned_cols=118 Identities=18% Similarity=0.078 Sum_probs=107.3
Q ss_pred CCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q psy17691 113 SPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTH---ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHS 188 (673)
Q Consensus 113 ~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 188 (673)
.+.....+.. +..++..|++++|+.+|+++++.+|++ ..++.++|.++...|++++|+.+++++++.+|++..+++
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 103 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALY 103 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHH
Confidence 4556666644 455667999999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
++|.++...|++++|+.+|+++++++|++..++..++.+..+
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999988887644
No 170
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.34 E-value=7.1e-11 Score=140.01 Aligned_cols=214 Identities=16% Similarity=0.146 Sum_probs=160.8
Q ss_pred CCCHHHHHHHHHHHHHcCC----------CCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCc--hhhhhhhhhhc
Q psy17691 17 PNFPDAYCNLANALKEKGQ----------PNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGN--RIRIGYVSSDF 84 (673)
Q Consensus 17 P~~~~a~~~Lg~~~~~~g~----------~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~--~~~l~~~~~~l 84 (673)
.+.+.+|+.+|.++...|+ .++...+...+.++...|++++|++ ++..++...++. ...++.++..+
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIe-yL~mArk~~~e~~Idt~LafaYAKl 1180 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVK-YLQMARKKARESYVETELIFALAKT 1180 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHH-HHHHHHhhcccccccHHHHHHHHhh
Confidence 4667788888888888876 4556677777778888888877775 444444433322 12344444444
Q ss_pred CCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 85 GNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQG 164 (673)
Q Consensus 85 ~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g 164 (673)
++.. .++.+ ...++....+..+..+...|+|++|+.+|+++ ..|..+|.+|.++|
T Consensus 1181 ~rle---------------ele~f--I~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLg 1235 (1630)
T 1xi4_A 1181 NRLA---------------ELEEF--INGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLG 1235 (1630)
T ss_pred cCHH---------------HHHHH--HhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhC
Confidence 3211 12222 13444455556666677899999999999996 47899999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 165 YIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRA 244 (673)
Q Consensus 165 ~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~A 244 (673)
++++|++++++| .+..+|...+.++...|++..|..+... +..+ ++.+..++..|...|.+++|+.+++++
T Consensus 1236 e~q~AIEaarKA-----~n~~aWkev~~acve~~Ef~LA~~cgl~-Iiv~---~deLeeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1236 EYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVH---ADELEELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred CHHHHHHHHHHh-----CCHHHHHHHHHHHhhhhHHHHHHHHHHh-hhcC---HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999998 5678999999999999999999998874 4433 556679999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHc
Q psy17691 245 IQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 245 l~l~p~~~~a~~~La~~~~~~ 265 (673)
+.+++.+...+..|+.++.+-
T Consensus 1307 L~LeraH~gmftELaiLyaKy 1327 (1630)
T 1xi4_A 1307 LGLERAHMGMFTELAILYSKF 1327 (1630)
T ss_pred hccChhHhHHHHHHHHHHHhC
Confidence 999999999999999988764
No 171
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.34 E-value=8.6e-13 Score=139.25 Aligned_cols=132 Identities=14% Similarity=0.007 Sum_probs=73.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy17691 122 YIISVLLLIQVSEAEECYNTALRLCPTHA-----------------DSLNNLANIKREQGYIEEATRLYLKALEVFPEFA 184 (673)
Q Consensus 122 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~-----------------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 184 (673)
.+..++..|++++|+.+|+++++..|++. .+++++|.+|..+|++++|+.+|+++++++|++.
T Consensus 185 ~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 264 (338)
T 2if4_A 185 DGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP 264 (338)
T ss_dssp HHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 33445568889999999999998888776 3778888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNT-LKEMQDIQGALQCYSRAIQINPGFAD 253 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~-~~~~g~~~eA~~~~~~Al~l~p~~~~ 253 (673)
.+++++|.+|..+|++++|+..|+++++++|++..++.+++.+ ....+..+++...|++++...|++..
T Consensus 265 ~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 265 KALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 8888888888888888888888888888888888888888877 34456677777888888887776543
No 172
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.33 E-value=1.1e-11 Score=118.80 Aligned_cols=133 Identities=20% Similarity=0.279 Sum_probs=109.2
Q ss_pred hhHHHHH-HHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCC----
Q psy17691 117 GTTFSYI-ISVLLLIQVSEAEECYNTALRL------CPTHADSLNNLANIKREQGYIEEATRLYLKALEV---FPE---- 182 (673)
Q Consensus 117 ~~~~~~~-~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~---~p~---- 182 (673)
..++..+ ..+...|++++|+.++++++++ .+....++.++|.++..+|++++|+.++++++++ .++
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 3444333 4455688999999999999994 3445678999999999999999999999999998 443
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 183 FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQP--SF----ADAYSNMGNTLKEMQDIQGALQCYSRAIQINP 249 (673)
Q Consensus 183 ~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p--~~----~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p 249 (673)
...++.++|.++...|++++|+.++++++++.+ .+ ..++.++|.++..+|++++|+.++++++++..
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999997632 22 34578999999999999999999999998744
No 173
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.31 E-value=1.1e-12 Score=138.55 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=96.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 146 CPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA-----------------AAHSNLASVLQQQGKLTDALLHYK 208 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~-----------------~~~~~la~~~~~~g~~~eA~~~~~ 208 (673)
.++.+..+..+|..++..|++++|+.+|++++++.|++. .+++++|.++..+|++++|+.+|+
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 344567899999999999999999999999999999877 489999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 209 EAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 209 ~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~ 265 (673)
++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.+|+.+....
T Consensus 255 ~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 255 IVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999885544
No 174
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.31 E-value=5.2e-12 Score=135.38 Aligned_cols=223 Identities=16% Similarity=0.139 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCC----------cHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCC
Q psy17691 2 IDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPN----------FPDAYCNLANALKEKGQINVLHKPPYKYTRELAP 71 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~----------~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p 71 (673)
+++|.+.+++. +++.+|..||.++...|+.+ +...+...+..+...|++++|.. +++..++..+
T Consensus 19 ld~A~~fae~~-----~~~~vWs~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~-yl~~ark~~~ 92 (449)
T 1b89_A 19 LDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVK-YLQMARKKAR 92 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhC-----CChHHHHHHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHhCc
Confidence 56778888776 44579999999999999743 34467777888888899999887 5555554322
Q ss_pred Cc--hhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 72 GN--RIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPT 148 (673)
Q Consensus 72 ~~--~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~ 148 (673)
+. ...+..++..+|+........ ..|+.. .| ..+..++..|+|++|..+|.++
T Consensus 93 ~~~i~~~Li~~Y~Klg~l~e~e~f~-----------------~~pn~~-a~~~IGd~~~~~g~yeeA~~~Y~~a------ 148 (449)
T 1b89_A 93 ESYVETELIFALAKTNRLAELEEFI-----------------NGPNNA-HIQQVGDRCYDEKMYDAAKLLYNNV------ 148 (449)
T ss_dssp ----------------CHHHHTTTT-----------------TCC-----------------CTTTHHHHHHHT------
T ss_pred cchhHHHHHHHHHHhCCHHHHHHHH-----------------cCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHh------
Confidence 22 234455555555433322111 124333 55 4455667799999999999987
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
..|..+|.++.++|++++|++.++++ +++.+|.....++...|+++.|..+..+ +.. +++-...+..+|
T Consensus 149 --~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~---~ad~l~~lv~~Y 217 (449)
T 1b89_A 149 --SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVV---HADELEELINYY 217 (449)
T ss_dssp --TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTT---CHHHHHHHHHHH
T ss_pred --hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHh---CHhhHHHHHHHH
Confidence 47889999999999999999999999 5789999999999999999999887775 223 444566788999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 229 KEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~ 265 (673)
.+.|++++|+.++++++.+++.+..++..|+.+|.+-
T Consensus 218 ek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 218 QDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988654
No 175
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.30 E-value=1.2e-12 Score=144.83 Aligned_cols=120 Identities=19% Similarity=0.186 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLK 229 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 229 (673)
+.++..+|.++.++|++++|++.|+++++++|++..+++++|.++..+|++++|++.|+++++++|+++.+++++|.+|.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 44567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCCc
Q psy17691 230 EMQDIQGALQCYSRAIQINPGFADAHSNLASI--HKDSGKRG 269 (673)
Q Consensus 230 ~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~--~~~~g~~~ 269 (673)
.+|++++|+++|+++++++|++..++.+++.+ +...|+++
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~ 127 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFE 127 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988 77767665
No 176
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.30 E-value=1.3e-11 Score=126.55 Aligned_cols=105 Identities=20% Similarity=0.143 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 147 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGN 226 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 226 (673)
|.++..+..+|..+...|++++|+..|+++++.+|++..+++++|.++..+|++++|+..|+++++++|++..+++++|.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 227 TLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 227 ~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
+|..+|++++|+.+|+++++++|++
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999866
No 177
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.30 E-value=1.7e-11 Score=130.87 Aligned_cols=120 Identities=19% Similarity=0.129 Sum_probs=112.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALR----------------LCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFA 184 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~----------------~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 184 (673)
..+..++..|++++|+.+|+++++ .+|.+..++.++|.+|..+|++++|+.+++++++++|++.
T Consensus 228 ~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 307 (370)
T 1ihg_A 228 NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNT 307 (370)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhH
Confidence 445567789999999999999999 7788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQC 240 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~ 240 (673)
.+++++|.+|..+|++++|++.|+++++++|++..++..++.++..+++++++...
T Consensus 308 ~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 308 KALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888654
No 178
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.30 E-value=1.4e-11 Score=134.06 Aligned_cols=162 Identities=20% Similarity=0.189 Sum_probs=127.2
Q ss_pred cccccCCCCCcEEEecCCccc--ccChhhHHHHHHHHhccc--CeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhh
Q psy17691 465 SRQQYGLPEDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVP--NSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLK 540 (673)
Q Consensus 465 ~r~~~~l~~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~p--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (673)
.|+++|++.+.+++++++++. |..+.++++|.++.++.| +.+|+++|.+.
T Consensus 233 ~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~-------------------------- 286 (438)
T 3c48_A 233 SRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS-------------------------- 286 (438)
T ss_dssp HHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------------------------
T ss_pred hHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCC--------------------------
Confidence 678899998888888888764 888999999999999988 78999988100
Q ss_pred ccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCceee
Q psy17691 541 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVT 619 (673)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt 619 (673)
.++...+.+++.+.+.|+. ++|.|.|.++.++....|+.+|+++-|. .++.|++.+|||++|+|||+
T Consensus 287 -----------~~g~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~ 354 (438)
T 3c48_A 287 -----------GPNATPDTYRHMAEELGVE-KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIA 354 (438)
T ss_dssp -----------------CHHHHHHHHTTCT-TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEE
T ss_pred -----------CCCcHHHHHHHHHHHcCCC-CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEe
Confidence 0134467788899999994 8999999999999999999999997765 56779999999999999999
Q ss_pred cCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 620 LPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 620 ~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
-....+.. ++. -|-..++.. |.+++.+...++.+|++.+.+++..
T Consensus 355 ~~~~~~~e-----~i~-~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~ 401 (438)
T 3c48_A 355 ARVGGLPI-----AVA-EGETGLLVDGHSPHAWADALATLLDDDETRIRMGED 401 (438)
T ss_dssp ESCTTHHH-----HSC-BTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCChhH-----Hhh-CCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 76543322 121 233455554 8999999999999999998887654
No 179
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.30 E-value=2.4e-10 Score=135.48 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHcCCCCcHHHHHH---------HHHHHHHcCChhhhcCChhhHHhh
Q psy17691 2 IDLAIDTYRRAIELQPN----FPDAYCNLANALKEKGQPNFPDAYCN---------LANALKEKGQINVLHKPPYKYTRE 68 (673)
Q Consensus 2 ~~eAi~~~~kAL~l~P~----~~~a~~~Lg~~~~~~g~~~~a~a~~~---------la~~l~~~g~~~~A~~~~~~~~~~ 68 (673)
+.+|++.|++++ ++|. +...-..+..+..+. ++.....+.. .|..+...|.+++|.. .|++..
T Consensus 1001 p~EaieLLEKiv-l~~s~fs~n~~LqnlLi~tAIka-D~~Rv~eyI~kLd~~d~~eIA~Iai~lglyEEAf~-IYkKa~- 1076 (1630)
T 1xi4_A 1001 PNELIELLEKIV-LDNSVFSEHRNLQNLLILTAIKA-DRTRVMEYINRLDNYDAPDIANIAISNELFEEAFA-IFRKFD- 1076 (1630)
T ss_pred HHHHHHHHHHHH-cCCCcccccHHHHHHHHHHHHHh-ChhhHHHHHHHhhhccHHHHHHHHHhCCCHHHHHH-HHHHcC-
Confidence 679999999999 5555 333333344443333 2233333333 4899999999999875 333321
Q ss_pred cCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHH-HHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 69 LAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYI-ISVLLLIQVSEAEECYNTALRLCP 147 (673)
Q Consensus 69 l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~~p 147 (673)
.....+...+..+++ ...+.+. ....+.+.+|... ..+...|++++|+.+|.++
T Consensus 1077 ---~~~~A~~VLie~i~n--------------ldrAiE~---Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA----- 1131 (1630)
T 1xi4_A 1077 ---VNTSAVQVLIEHIGN--------------LDRAYEF---AERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA----- 1131 (1630)
T ss_pred ---CHHHHHHHHHHHHhh--------------HHHHHHH---HHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----
Confidence 111111222222222 1222222 1234567777555 4555689999999999886
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---------------------------CHHHHHHHHHHHHHcCCH
Q psy17691 148 THADSLNNLANIKREQGYIEEATRLYLKALEVFPE---------------------------FAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 148 ~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~---------------------------~~~~~~~la~~~~~~g~~ 200 (673)
+++..+..+|.++.+.|++++|+++|+.+.+..++ +...+.++|..+...|+|
T Consensus 1132 dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~Y 1211 (1630)
T 1xi4_A 1132 DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMY 1211 (1630)
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCH
Confidence 88899999999999999999999999887765533 234567799999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------------------------CCHHHH
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP-------------------------GFADAH 255 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p-------------------------~~~~a~ 255 (673)
++|+.+|+++ ..|..+|.+|.++|++++|++++++|....+ .+++.+
T Consensus 1212 eeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deL 1283 (1630)
T 1xi4_A 1212 DAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADEL 1283 (1630)
T ss_pred HHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHH
Confidence 9999999986 4789999999999999999999999843322 122333
Q ss_pred HHHHHHHHHcCCCc---------cccCCCCHHHHHHHHHHh
Q psy17691 256 SNLASIHKDSGKRG---------FFIRTDLNSAYFWLLLLD 287 (673)
Q Consensus 256 ~~La~~~~~~g~~~---------l~l~p~~~~a~~~l~~~~ 287 (673)
..++..|...|.++ +.+++.+...+..++++.
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLy 1324 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY 1324 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHH
Confidence 34455556666664 556666666665555443
No 180
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.29 E-value=8.6e-12 Score=133.47 Aligned_cols=157 Identities=15% Similarity=0.141 Sum_probs=127.7
Q ss_pred cccccccCCCCCcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhh
Q psy17691 463 ITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLK 540 (673)
Q Consensus 463 ~~~r~~~~l~~~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (673)
...|+.+|++.+.+++++++++ .|..+.+++++.++.+..|+.+|+++|
T Consensus 186 ~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G----------------------------- 236 (394)
T 3okp_A 186 SATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG----------------------------- 236 (394)
T ss_dssp HHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEEC-----------------------------
T ss_pred HHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEc-----------------------------
Confidence 3567889999998888888876 588999999999999999999999988
Q ss_pred ccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCC--------CCCcchhhhhhh
Q psy17691 541 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--------CNGHTTSMDVLW 612 (673)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p--------~~g~~t~~eal~ 612 (673)
++...+.+++.+ .|+ .++|+|.|.++.++....|..+|+++-|.. ++.|++.+|||+
T Consensus 237 ------------~g~~~~~l~~~~--~~~-~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 237 ------------SGRYESTLRRLA--TDV-SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp ------------CCTTHHHHHHHT--GGG-GGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred ------------CchHHHHHHHHH--hcc-cCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHH
Confidence 344455666655 666 389999999999999999999999987664 677999999999
Q ss_pred cCCceeecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 613 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 613 ~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
+|+|||+-.......-+ .-| ..++.. |.+++++...++.+|++.+.+++..
T Consensus 302 ~G~PvI~~~~~~~~e~i------~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 354 (394)
T 3okp_A 302 CGVPVIAGTSGGAPETV------TPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAA 354 (394)
T ss_dssp TTCCEEECSSTTGGGGC------CTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCCEEEeCCCChHHHH------hcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99999997654443311 124 556655 8999999999999999999888764
No 181
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.28 E-value=2.6e-11 Score=103.83 Aligned_cols=105 Identities=14% Similarity=0.072 Sum_probs=96.5
Q ss_pred CCCChhHHHH-HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHH
Q psy17691 113 SPDDGTTFSY-IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE--FAAAHSN 189 (673)
Q Consensus 113 ~p~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~--~~~~~~~ 189 (673)
+|++...+.. +..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+.+++++++.+|. +..++.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 4666666644 455567999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHc-CCHHHHHHHHHHHHHhCCCC
Q psy17691 190 LASVLQQQ-GKLTDALLHYKEAIRIQPSF 217 (673)
Q Consensus 190 la~~~~~~-g~~~eA~~~~~~al~~~p~~ 217 (673)
+|.++... |++++|+++++++++..|.+
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999 99999999999999999875
No 182
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.28 E-value=3e-11 Score=106.50 Aligned_cols=111 Identities=22% Similarity=0.209 Sum_probs=101.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF-------AAAHSNLASV 193 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~~~~la~~ 193 (673)
..+..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+.+++++++..|.+ ..+++++|.+
T Consensus 9 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 88 (131)
T 1elr_A 9 ELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNS 88 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHH
Confidence 344556679999999999999999999999999999999999999999999999999998877 8999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ 232 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g 232 (673)
+...|++++|+++|+++++..| +...+..++.+....+
T Consensus 89 ~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 89 YFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 5888888888876544
No 183
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.28 E-value=1e-11 Score=134.45 Aligned_cols=164 Identities=14% Similarity=0.158 Sum_probs=126.5
Q ss_pred ccccccCCCCCcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhc
Q psy17691 464 TSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKA 541 (673)
Q Consensus 464 ~~r~~~~l~~~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (673)
..|+++|++.+.+++++++++ .|..+.++++|..+.+..|+.+|+++|.. . .
T Consensus 220 ~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g---~--~--------------------- 273 (416)
T 2x6q_A 220 RILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVM---A--H--------------------- 273 (416)
T ss_dssp HHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECC---C--T---------------------
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecC---c--c---------------------
Confidence 467889999888888888866 48889999999999999999999998810 0 0
Q ss_pred cCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcC---hHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCce
Q psy17691 542 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA---KEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPV 617 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~---~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPv 617 (673)
......+.+++..+..|+. ++|.|+|..+ .++....|..+|+++-|. .++.|++.+|||++|+||
T Consensus 274 ----------~~~~~~~~l~~~~~~~~~~-~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~Pv 342 (416)
T 2x6q_A 274 ----------DDPEGWIYFEKTLRKIGED-YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPV 342 (416)
T ss_dssp ----------TCHHHHHHHHHHHHHHTTC-TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCE
T ss_pred ----------cchhHHHHHHHHHHHhCCC-CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCE
Confidence 0011245677888889984 8999999654 678999999999997654 667899999999999999
Q ss_pred eecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 618 VTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 618 vt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
|+-...... .++ .-|-..++..|.+++.+...++.+|++.+++++..
T Consensus 343 I~~~~~g~~-----e~i-~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~ 389 (416)
T 2x6q_A 343 IGRAVGGIK-----FQI-VDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAK 389 (416)
T ss_dssp EEESCHHHH-----HHC-CBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEccCCCCh-----hhe-ecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 996542111 111 12456677779999999999999999998887654
No 184
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.27 E-value=1.5e-11 Score=132.98 Aligned_cols=165 Identities=13% Similarity=0.035 Sum_probs=126.3
Q ss_pred ccccccCCCC--CcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhh
Q psy17691 464 TSRQQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVL 539 (673)
Q Consensus 464 ~~r~~~~l~~--~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (673)
..|+++|++. +.++|++++++ .|..+.++++|.++.+..|+.+|+++|.....
T Consensus 171 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~----------------------- 227 (413)
T 3oy2_A 171 DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHE----------------------- 227 (413)
T ss_dssp THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTT-----------------------
T ss_pred HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCccc-----------------------
Confidence 4567789988 88999999986 69999999999999999999999998811000
Q ss_pred hccCchhhhhccCChhhhhhHHHHHHHcCCCCCe-------EEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhh
Q psy17691 540 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHR-------ILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVL 611 (673)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r-------v~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal 611 (673)
....-++.+++.+++.|++ ++ |.|.|.++.++....|+.+|+++-|. .++.|++.+|||
T Consensus 228 ------------~~~~l~~~~~~~~~~~~l~-~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAm 294 (413)
T 3oy2_A 228 ------------SKFDLHSIALRELVASGVD-NVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGA 294 (413)
T ss_dssp ------------CSCCHHHHHHHHHHHHTCS-CHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHH
T ss_pred ------------chhhHHHHHHHHHHHcCcc-cccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHH
Confidence 0001136788888889995 66 88889999999999999999997654 668899999999
Q ss_pred hcCCceeecCCCcchhhhHHHHHHh-c----------------CCCcccc-CCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 612 WTGTPVVTLPGETLASRVAASQLAT-L----------------GCPELIA-RTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 612 ~~GvPvvt~~g~~~~~r~~~~~l~~-~----------------gl~~~ia-~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
++|+|||+-....+.. ++.. . |+..++. .|.+++.+.. ++..|++.+++++..
T Consensus 295 a~G~PvI~s~~~g~~e-----~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~ 365 (413)
T 3oy2_A 295 VLGKPLIISAVGGADD-----YFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKR 365 (413)
T ss_dssp TTTCCEEEECCHHHHH-----HSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHH
T ss_pred HcCCCEEEcCCCChHH-----HHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 9999999855422111 1111 0 3322443 5899999999 999999999887654
No 185
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.27 E-value=8.7e-11 Score=124.61 Aligned_cols=214 Identities=9% Similarity=0.051 Sum_probs=152.8
Q ss_pred CHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCch
Q psy17691 1 LIDLAIDTYRRAIELQPNFP------DAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNR 74 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~------~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~ 74 (673)
++++|+..+++++++.|... .++.++|.++..+|+++.+..++..+..........
T Consensus 68 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~------------------ 129 (373)
T 1hz4_A 68 ELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE------------------ 129 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT------------------
T ss_pred cHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc------------------
Confidence 47889999999998765432 235666677766666555555554444332110000
Q ss_pred hhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCC-----
Q psy17691 75 IRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRLCPT----- 148 (673)
Q Consensus 75 ~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~~p~----- 148 (673)
..|.....+. .+..++..|++++|+.+++++++..+.
T Consensus 130 -------------------------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 130 -------------------------------------QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp -------------------------------------TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred -------------------------------------cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 0011222333 445567799999999999999998775
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--C-HHHHH----HHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPE--F-AAAHS----NLASVLQQQGKLTDALLHYKEAIRIQPSF---- 217 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~--~-~~~~~----~la~~~~~~g~~~eA~~~~~~al~~~p~~---- 217 (673)
...++..+|.++...|++++|..++++++++.+. . ..... .++.++...|++++|...++++++..+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 252 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFL 252 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhh
Confidence 3567889999999999999999999999987432 2 12111 34556889999999999999998877653
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCc
Q psy17691 218 ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPG------FADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 218 ~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~------~~~a~~~La~~~~~~g~~~ 269 (673)
...+..+|.++...|++++|...+++++...+. ...++..++.++...|+++
T Consensus 253 ~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 310 (373)
T 1hz4_A 253 QGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKS 310 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHH
Confidence 346788999999999999999999999887442 2257788899999998865
No 186
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.27 E-value=1.4e-11 Score=118.17 Aligned_cols=143 Identities=15% Similarity=0.068 Sum_probs=118.0
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcCCH
Q psy17691 127 LLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEV------FPEFAAAHSNLASVLQQQGKL 200 (673)
Q Consensus 127 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~ 200 (673)
+..|++++|+..++......+....++..+|.++...|++++|+.++++++++ .+....++.++|.++...|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 45789999999666555433367889999999999999999999999999994 344578899999999999999
Q ss_pred HHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHcCC
Q psy17691 201 TDALLHYKEAIRI---QPSF----ADAYSNMGNTLKEMQDIQGALQCYSRAIQINP--GF----ADAHSNLASIHKDSGK 267 (673)
Q Consensus 201 ~eA~~~~~~al~~---~p~~----~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p--~~----~~a~~~La~~~~~~g~ 267 (673)
++|+.++++++++ .+++ ..++.++|.++..+|++++|+.++++++++.+ ++ ..++.++|.++...|+
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcC
Confidence 9999999999998 4433 56799999999999999999999999997632 22 2356899999999998
Q ss_pred Cc
Q psy17691 268 RG 269 (673)
Q Consensus 268 ~~ 269 (673)
++
T Consensus 163 ~~ 164 (203)
T 3gw4_A 163 LL 164 (203)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 187
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.27 E-value=2.8e-11 Score=110.48 Aligned_cols=130 Identities=17% Similarity=0.140 Sum_probs=111.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTH------ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHS 188 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~ 188 (673)
..+..+...|++++|+.+++++++..+.. ..++..+|.++..+|++++|+.++++++++.+.. ..++.
T Consensus 14 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 93 (164)
T 3ro3_A 14 NLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCY 93 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 33455667999999999999999986542 2589999999999999999999999999986543 67899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRIQPS------FADAYSNMGNTLKEMQDIQGALQCYSRAIQINPG 250 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~ 250 (673)
++|.++...|++++|++++++++++.+. ...++.++|.++..+|++++|++++++++++...
T Consensus 94 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 94 SLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987432 2568899999999999999999999999987544
No 188
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.23 E-value=1.2e-11 Score=117.48 Aligned_cols=152 Identities=11% Similarity=0.080 Sum_probs=114.3
Q ss_pred cCCCCCcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchh
Q psy17691 469 YGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSI 546 (673)
Q Consensus 469 ~~l~~~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (673)
+.++.+..+|++++++ .|..+.+++++.++ |+.+|+++|
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G----------------------------------- 57 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVG----------------------------------- 57 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEB-----------------------------------
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEe-----------------------------------
Confidence 4566666666666665 47777777777664 889999988
Q ss_pred hhhccCChhhhhhHHHHHH--HcCCCCCeEEeccCcChHHHHHhcccccEEecC-CCCCCcchhhhhhhcCCceeecCCC
Q psy17691 547 LWLLKFPAVGEANIQATAQ--ALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT-PLCNGHTTSMDVLWTGTPVVTLPGE 623 (673)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~--~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~-~p~~g~~t~~eal~~GvPvvt~~g~ 623 (673)
.+...+.+++.+. ..|+ .++|.|.|.++.++....|+.+|+++-| ...+.|++.+|||++|+|||+-...
T Consensus 58 ------~~~~~~~l~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~ 130 (177)
T 2f9f_A 58 ------WFSKGDHAERYARKIMKIA-PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG 130 (177)
T ss_dssp ------CCCTTSTHHHHHHHHHHHS-CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH
T ss_pred ------cCccHHHHHHHHHhhhccc-CCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCC
Confidence 2223356777777 7888 4899999999999999999999999874 4667899999999999999996542
Q ss_pred cchhhhHHHHHHhcCCCccc-cCCHHHHHHHHHHhcCCHHH-HHHHHhhhc
Q psy17691 624 TLASRVAASQLATLGCPELI-ARTHKEYQDIAIRLGTDRDY-CEKALLYHE 672 (673)
Q Consensus 624 ~~~~r~~~~~l~~~gl~~~i-a~~~~~yv~~a~~la~d~~~-~~~~~~~~~ 672 (673)
.+.. ++. -|-..++ ..|.+++++...++.+|++. ++++|...+
T Consensus 131 ~~~e-----~i~-~~~~g~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 131 GFKE-----TVI-NEKTGYLVNADVNEIIDAMKKVSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHH-----HCC-BTTTEEEECSCHHHHHHHHHHHHHCTTTTHHHHHHHHH
T ss_pred CHHH-----Hhc-CCCccEEeCCCHHHHHHHHHHHHhCHHHHHHHHHHHHh
Confidence 2111 111 1334444 58999999999999999887 778877654
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.22 E-value=3.6e-12 Score=129.32 Aligned_cols=180 Identities=12% Similarity=0.031 Sum_probs=150.9
Q ss_pred hhHHHHH--HHhcCCCChhHHHHH--------HHHHHcCCHHHHHHHHHHHHHhCCCCHH--------------------
Q psy17691 102 KSRVEIF--CYALSPDDGTTFSYI--------ISVLLLIQVSEAEECYNTALRLCPTHAD-------------------- 151 (673)
Q Consensus 102 ~~a~~~~--~~~l~p~~~~~~~~~--------~~~~~~g~~~~A~~~~~~al~~~p~~~~-------------------- 151 (673)
..+...+ ...++|+...+|... ..+...++..+++..+++++++.|....
T Consensus 23 ~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~ 102 (282)
T 4f3v_A 23 ARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPL 102 (282)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHH
T ss_pred HHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHh
Confidence 3444554 557899999999654 5566788889999999999998776543
Q ss_pred -HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHH
Q psy17691 152 -SLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF--ADAYSNMGNTL 228 (673)
Q Consensus 152 -a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~--~~~~~~lg~~~ 228 (673)
+...++.++...|++++|.+.|+..+...|++. .++.+|.++++.+++++|+.+|+++.+..++. ..+++++|.++
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al 181 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAA 181 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHH
Confidence 445588999999999999999999999999988 99999999999999999999999887653221 45899999999
Q ss_pred HHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCCc---------cccCCCCHHHHHHH
Q psy17691 229 KEMQDIQGALQCYSRAIQIN--PG-FADAHSNLASIHKDSGKRG---------FFIRTDLNSAYFWL 283 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~Al~l~--p~-~~~a~~~La~~~~~~g~~~---------l~l~p~~~~a~~~l 283 (673)
..+|++++|+.+|++++.-. |. ..++++++|.++.++|+.+ +..+|+ +.+...|
T Consensus 182 ~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 182 ANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 99999999999999998654 65 6689999999999999988 678898 7766554
No 190
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.19 E-value=4.7e-11 Score=129.55 Aligned_cols=180 Identities=10% Similarity=0.049 Sum_probs=134.8
Q ss_pred eeccCccccccccccccCcccCcccccccccccCCCCCcEEEecCCccc---ccChhhHHHHHHHHhcc--cCeeEEeec
Q psy17691 437 VLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLY---KIDPSTLQMWVNVLKAV--PNSILWLLK 511 (673)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~---K~~~~~~~~~~~il~~~--p~~~l~~~~ 511 (673)
++.||+....+.+..... .+.......|+++|++.+ +++++++++. |..+.+++++.++.+.. |+.+|+++|
T Consensus 216 vi~ngvd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G 292 (439)
T 3fro_A 216 YVFNGIDCSFWNESYLTG--SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG 292 (439)
T ss_dssp ECCCCCCTTTSCGGGSCS--CHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEEC
T ss_pred ecCCCCCchhcCcccccc--hhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEc
Confidence 467787665543331100 011122356788999988 8888888654 88899999999999887 999999998
Q ss_pred cCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhh--hhHHHHHHHcCCCCCeEEeccCcChHHHHHhc
Q psy17691 512 FPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGE--ANIQATAQALGLDQHRILFSNVAAKEEHVRRG 589 (673)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~ 589 (673)
++... +.+++..++.| ++++|.|..+.++....|
T Consensus 293 -----------------------------------------~g~~~~~~~l~~~~~~~~---~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 293 -----------------------------------------KGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELY 328 (439)
T ss_dssp -----------------------------------------CCCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHH
T ss_pred -----------------------------------------CCChhHHHHHHHHHhhcC---CEEEEcCCCCHHHHHHHH
Confidence 23333 77888888888 788999999999999999
Q ss_pred ccccEEecCC-CCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC-CHHHHH
Q psy17691 590 QLADVCLDTP-LCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT-DRDYCE 665 (673)
Q Consensus 590 ~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~-d~~~~~ 665 (673)
..+|+++-|. .++-|++.+|||++|+|||+-....+.. ++. -| ..++.. |.+++.+...++.. |++.++
T Consensus 329 ~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e-----~~~-~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~ 401 (439)
T 3fro_A 329 GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRD-----IIT-NE-TGILVKAGDPGELANAILKALELSRSDLS 401 (439)
T ss_dssp TTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHH-----HCC-TT-TCEEECTTCHHHHHHHHHHHHHHTTTTTH
T ss_pred HHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcce-----eEE-cC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHH
Confidence 9999997765 5577999999999999999965532222 221 24 555554 89999999999998 888888
Q ss_pred HHHhh
Q psy17691 666 KALLY 670 (673)
Q Consensus 666 ~~~~~ 670 (673)
+++..
T Consensus 402 ~~~~~ 406 (439)
T 3fro_A 402 KFREN 406 (439)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 191
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.19 E-value=3.3e-11 Score=129.40 Aligned_cols=156 Identities=14% Similarity=0.190 Sum_probs=119.8
Q ss_pred ccccccCCCCCcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhc
Q psy17691 464 TSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKA 541 (673)
Q Consensus 464 ~~r~~~~l~~~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (673)
..|+++|++.+.+++++++++ .|..+.++++|.++.+. ++.+|+++|
T Consensus 200 ~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G------------------------------ 248 (394)
T 2jjm_A 200 QLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVG------------------------------ 248 (394)
T ss_dssp HHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEEC------------------------------
T ss_pred HHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEEC------------------------------
Confidence 456788998887788888865 48889999999999877 678999888
Q ss_pred cCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCceeec
Q psy17691 542 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVTL 620 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt~ 620 (673)
++...+.+++.+.+.|+ .++|.|.|. .++....|..+|+++-|. .++.|++++|||++|+|||+-
T Consensus 249 -----------~g~~~~~l~~~~~~~~l-~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 249 -----------DGPEFCTILQLVKNLHI-EDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------CCTTHHHHHHHHHTTTC-GGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------CchHHHHHHHHHHHcCC-CCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEe
Confidence 34456778888999998 489999995 467778888999997765 567799999999999999987
Q ss_pred CCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 621 PGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 621 ~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
....... ++ .-|-..++.. |.+++++...++.+|++.+.+++..
T Consensus 315 ~~~~~~e-----~v-~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~ 360 (394)
T 2jjm_A 315 RVGGIPE-----VI-QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGER 360 (394)
T ss_dssp CCTTSTT-----TC-CBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCChHH-----Hh-hcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 6543322 11 1133445554 8999999999999999998887654
No 192
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.16 E-value=1.7e-10 Score=100.55 Aligned_cols=81 Identities=19% Similarity=0.144 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 135 AEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ 214 (673)
Q Consensus 135 A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~ 214 (673)
|+..|+++++.+|+++.+++.+|.++...|++++|+.+|+++++++|++..+++++|.++...|++++|+..|++++++.
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555444
Q ss_pred C
Q psy17691 215 P 215 (673)
Q Consensus 215 p 215 (673)
|
T Consensus 84 ~ 84 (115)
T 2kat_A 84 Q 84 (115)
T ss_dssp H
T ss_pred c
Confidence 3
No 193
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.16 E-value=4.9e-11 Score=126.69 Aligned_cols=157 Identities=14% Similarity=0.151 Sum_probs=123.3
Q ss_pred ccccccCCCCCcEEEecCCccc--ccChhhHHHHHHHHhc-ccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhh
Q psy17691 464 TSRQQYGLPEDAIVYCNFNQLY--KIDPSTLQMWVNVLKA-VPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLK 540 (673)
Q Consensus 464 ~~r~~~~l~~~~~~~~~~~~~~--K~~~~~~~~~~~il~~-~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (673)
..|+++|++.+.+++++++++. |..+.+++++.++.+. .|+.+|+++|
T Consensus 185 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G----------------------------- 235 (374)
T 2iw1_A 185 IYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVG----------------------------- 235 (374)
T ss_dssp HHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEES-----------------------------
T ss_pred HHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEc-----------------------------
Confidence 4678899999888888888664 7888889999988777 5899999988
Q ss_pred ccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCceee
Q psy17691 541 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVT 619 (673)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt 619 (673)
++. .+.+++.+.+.|+ .++|.|+|. .++....|..+|+++-|. .++.|++++|||++|+|||+
T Consensus 236 ------------~g~-~~~~~~~~~~~~~-~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~ 299 (374)
T 2iw1_A 236 ------------QDK-PRKFEALAEKLGV-RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLT 299 (374)
T ss_dssp ------------SSC-CHHHHHHHHHHTC-GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEE
T ss_pred ------------CCC-HHHHHHHHHHcCC-CCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEE
Confidence 222 3567888889998 489999996 467888888999997654 66889999999999999999
Q ss_pred cCCCcchhhhHHHHHHhcCCCccccC---CHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 620 LPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 620 ~~g~~~~~r~~~~~l~~~gl~~~ia~---~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
-....... ++.. |-..++.. |.+++++...++.+|++.++++++..
T Consensus 300 ~~~~~~~e-----~i~~-~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 348 (374)
T 2iw1_A 300 TAVCGYAH-----YIAD-ANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENA 348 (374)
T ss_dssp ETTSTTTH-----HHHH-HTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ecCCCchh-----hhcc-CCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 77544333 3333 23344443 89999999999999999998887653
No 194
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.16 E-value=6e-10 Score=114.47 Aligned_cols=159 Identities=9% Similarity=-0.006 Sum_probs=127.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----CHHHHHHH--H
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCP--THADSLNNLANIKREQGYIEEATRLYLKALEVFPE----FAAAHSNL--A 191 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p--~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~----~~~~~~~l--a 191 (673)
+..+..+...|++++|+..+++.+..+| ++.+++..++.++..+|+.+.|.+.+++..+.+|+ +......+ |
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 3444555668999999999999999887 88999999999999999999999999999999983 23334444 4
Q ss_pred HHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHH
Q psy17691 192 SVLQQQG--KLTDALLHYKEAIRIQPS--FADAYSNMGNTLKEMQDIQGALQCYSRAIQI----------NPGFADAHSN 257 (673)
Q Consensus 192 ~~~~~~g--~~~eA~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l----------~p~~~~a~~~ 257 (673)
++....| ++++|...|+++.+..|+ ....+.+ ++.++|++++|.+.++++++. +|++++++.|
T Consensus 184 ~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 184 YIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp HHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 4466666 899999999998888876 3334444 899999999999999988776 5889999999
Q ss_pred HHHHHHHcCCCc-------cccCCCCHHHHH
Q psy17691 258 LASIHKDSGKRG-------FFIRTDLNSAYF 281 (673)
Q Consensus 258 La~~~~~~g~~~-------l~l~p~~~~a~~ 281 (673)
++.+...+|+-. .+++|+++...-
T Consensus 261 ~i~l~~~lgk~a~~l~~qL~~~~P~hp~i~d 291 (310)
T 3mv2_B 261 QITLALMQGLDTEDLTNQLVKLDHEHAFIKH 291 (310)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHhChHHHHHHHHHHHhCCCChHHHH
Confidence 998888888732 567888887543
No 195
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.16 E-value=1.1e-10 Score=109.16 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=109.8
Q ss_pred EEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCC
Q psy17691 476 IVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFP 553 (673)
Q Consensus 476 ~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (673)
++|++++++ .|..+.++++|..+ +..|+.+|+++| .
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~~l~i~G-----------------------------------------~ 40 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALS-KYKQDIVLLLKG-----------------------------------------K 40 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTC-TTGGGEEEEEEC-----------------------------------------C
T ss_pred eEEEEEeccchhcCHHHHHHHHHHh-ccCCCeEEEEEe-----------------------------------------C
Confidence 345555544 58889999999886 566999999988 3
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCC-ceeec-CCCcchhhhH
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGT-PVVTL-PGETLASRVA 630 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~Gv-Pvvt~-~g~~~~~r~~ 630 (673)
+...+.+++.+.+.|+ ++.| |.++.++....|+.+|+++-|. ..+.|++.+|||++|+ |||+- .+.....
T Consensus 41 g~~~~~~~~~~~~~~~---~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~--- 113 (166)
T 3qhp_A 41 GPDEKKIKLLAQKLGV---KAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ--- 113 (166)
T ss_dssp STTHHHHHHHHHHHTC---EEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG---
T ss_pred CccHHHHHHHHHHcCC---eEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh---
Confidence 4456778888899988 8999 9999999999999999997765 5677999999999996 99993 3322221
Q ss_pred HHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 631 ASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 631 ~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
++..-+. -+...|.+++.+...++.+|++.+.+++...
T Consensus 114 --~~~~~~~-~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 151 (166)
T 3qhp_A 114 --FALDERS-LFEPNNAKDLSAKIDWWLENKLERERMQNEY 151 (166)
T ss_dssp --GCSSGGG-EECTTCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --hccCCce-EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 0111111 2334689999999999999999999887653
No 196
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.16 E-value=2.8e-10 Score=99.21 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 167 EEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 167 ~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
++|+..|+++++.+|++..+++++|.++...|++++|+..|+++++++|++..++.++|.++..+|++++|+.+|+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC--CCHHHHHHHHHHHHHcCC
Q psy17691 247 INP--GFADAHSNLASIHKDSGK 267 (673)
Q Consensus 247 l~p--~~~~a~~~La~~~~~~g~ 267 (673)
+.| .+......+...+..+++
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhcc
Confidence 987 455666667666655543
No 197
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.13 E-value=3e-11 Score=103.95 Aligned_cols=86 Identities=19% Similarity=0.233 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF------ADAHSN 257 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~ 257 (673)
...++++|.++...|++++|++.|+++++++|+++.++.++|.++..+|++++|+.+|+++++++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 34555556666666666666666666666666666666666666666666666666666666666655 555666
Q ss_pred HHHHHHHcCCCc
Q psy17691 258 LASIHKDSGKRG 269 (673)
Q Consensus 258 La~~~~~~g~~~ 269 (673)
++.++...|+++
T Consensus 84 ~~~~~~~~~~~~ 95 (111)
T 2l6j_A 84 LELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHHhHh
Confidence 666666555554
No 198
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.13 E-value=4.7e-10 Score=92.61 Aligned_cols=82 Identities=29% Similarity=0.533 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHK 263 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~ 263 (673)
..+++.+|.++...|++++|+..|+++++.+|++..++.++|.++..+|++++|+.+|+++++++|++..++.++|.++.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555554
Q ss_pred Hc
Q psy17691 264 DS 265 (673)
Q Consensus 264 ~~ 265 (673)
..
T Consensus 89 ~~ 90 (91)
T 1na3_A 89 KQ 90 (91)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 199
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.13 E-value=1.6e-10 Score=124.05 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=117.7
Q ss_pred CCCCCcEEEecCCcc---cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchh
Q psy17691 470 GLPEDAIVYCNFNQL---YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSI 546 (673)
Q Consensus 470 ~l~~~~~~~~~~~~~---~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (673)
+++.+.+++++++++ .|..+.++++|.++.++.|+.+|+++|
T Consensus 203 ~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G----------------------------------- 247 (406)
T 2gek_A 203 GYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVG----------------------------------- 247 (406)
T ss_dssp TCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEES-----------------------------------
T ss_pred hccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEc-----------------------------------
Confidence 344445666666766 688999999999999999999999988
Q ss_pred hhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecC-C-CCCCcchhhhhhhcCCceeecCCCc
Q psy17691 547 LWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT-P-LCNGHTTSMDVLWTGTPVVTLPGET 624 (673)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~-~-p~~g~~t~~eal~~GvPvvt~~g~~ 624 (673)
++.. +.+++.++++ .++|.|.|.++..+....|+.+|+++-| . ..+.|++++|||++|+|||+-....
T Consensus 248 ------~~~~-~~l~~~~~~~---~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 317 (406)
T 2gek_A 248 ------RGDE-DELREQAGDL---AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDA 317 (406)
T ss_dssp ------CSCH-HHHHHHTGGG---GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHH
T ss_pred ------CCcH-HHHHHHHHhc---cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCc
Confidence 2333 5677766655 5899999999999999999999999877 4 6677999999999999999976522
Q ss_pred chhhhHHHHHHhcCCCcccc--CCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 625 LASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia--~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
+. .++. -|-..++. .|.+++++...++.+|++.+.+++..
T Consensus 318 ~~-----e~i~-~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 359 (406)
T 2gek_A 318 FR-----RVLA-DGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVAR 359 (406)
T ss_dssp HH-----HHHT-TTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HH-----HHhc-CCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 21 1222 24455665 78999999999999999998887654
No 200
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.12 E-value=5.7e-10 Score=92.11 Aligned_cols=85 Identities=34% Similarity=0.473 Sum_probs=77.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy17691 148 THADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNT 227 (673)
Q Consensus 148 ~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 227 (673)
.+..+++.+|.++...|++++|+.+|+++++.+|++..++.++|.++...|++++|+..|+++++++|++..++.++|.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q psy17691 228 LKEMQ 232 (673)
Q Consensus 228 ~~~~g 232 (673)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87765
No 201
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.09 E-value=5e-10 Score=96.10 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF------ADAYS 222 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~ 222 (673)
++.++..+|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|++.|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q psy17691 223 NMGNTLKEMQDIQGALQCYSR 243 (673)
Q Consensus 223 ~lg~~~~~~g~~~eA~~~~~~ 243 (673)
.+|.++..+|++++|+..+++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999998888776654
No 202
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.09 E-value=1.9e-10 Score=127.63 Aligned_cols=171 Identities=8% Similarity=-0.031 Sum_probs=125.5
Q ss_pred ccccccC-----CCCCcEEEecCCcc--cccChhhHHHHHHHHhcccCe-eEEeeccCCcCCCCCCCCcccccCCCCccc
Q psy17691 464 TSRQQYG-----LPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNS-ILWLLKFPAVGEANISRPLFRPRLRPSAST 535 (673)
Q Consensus 464 ~~r~~~~-----l~~~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (673)
..|+++| ++.+.+++++++++ .|..+.++++|.++.+..|+. +|+++|.. .|... .+
T Consensus 246 ~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~-~~~~~----~y---------- 310 (499)
T 2r60_A 246 KITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGI-ENPFE----DY---------- 310 (499)
T ss_dssp HHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSC-SBTTT----BC----------
T ss_pred HHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCC-CCccc----cc----------
Confidence 4567778 88888888888876 488999999999988877876 67777710 00000 00
Q ss_pred hhhhhccCchhhhhccCChhh---hhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccc----cEEecCC-CCCCcchh
Q psy17691 536 SIVLKAVPNSILWLLKFPAVG---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----DVCLDTP-LCNGHTTS 607 (673)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~----Di~Ld~~-p~~g~~t~ 607 (673)
+ ..++.. .+.+++.++++|+. ++|+|+|.++.++....|+.+ ||++-|. .++-|++.
T Consensus 311 -------~-------~l~~~~~~y~~~l~~~~~~~~l~-~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~ 375 (499)
T 2r60_A 311 -------S-------RAGQEEKEILGKIIELIDNNDCR-GKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAP 375 (499)
T ss_dssp -------T-------TSCHHHHHHHHHHHHHHHHTTCB-TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHH
T ss_pred -------c-------cccccchHHHHHHHHHHHhcCCC-ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHH
Confidence 0 000112 57888999999994 899999999999999999999 9997654 66779999
Q ss_pred hhhhhcCCceeecCCCcchhhhHHHHHHhcCCCcccc--CCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 608 MDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 608 ~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia--~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
+|||++|+|||+-....... ++.. |-..++. .|.+++.+...++.+|++.+.+++..
T Consensus 376 lEAma~G~PvI~s~~~g~~e-----~v~~-~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~ 434 (499)
T 2r60_A 376 VEAMASGLPAVVTRNGGPAE-----ILDG-GKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEK 434 (499)
T ss_dssp HHHHHTTCCEEEESSBHHHH-----HTGG-GTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCCHHH-----HhcC-CceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99999999999976433222 2222 3334444 48999999999999999998887654
No 203
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.08 E-value=2e-09 Score=97.81 Aligned_cols=120 Identities=18% Similarity=0.200 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHH
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ----QGKLTDALLH 206 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~eA~~~ 206 (673)
++++|+.+|+++.+..... +. +|.+|...+..++|+++|+++.+. +++.++++||.+|.. .+++++|+++
T Consensus 10 d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~ 83 (138)
T 1klx_A 10 DLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQY 83 (138)
T ss_dssp HHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 7899999999999986444 44 999999999999999999999987 789999999999999 8999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 207 YKEAIRIQPSFADAYSNMGNTLKE----MQDIQGALQCYSRAIQINPGFADAHSNLAS 260 (673)
Q Consensus 207 ~~~al~~~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~Al~l~p~~~~a~~~La~ 260 (673)
|+++.+. .++.++++||.+|.. .+++++|+.+|++|.+. ++..+..+|+.
T Consensus 84 ~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 84 YSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC--
T ss_pred HHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHhh
Confidence 9999987 679999999999999 99999999999999987 56777776654
No 204
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.06 E-value=5.1e-10 Score=101.97 Aligned_cols=120 Identities=23% Similarity=0.251 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF------AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF------ 217 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~------ 217 (673)
..++..+|.++...|++++|+.++++++++.+.. ..++.++|.++...|++++|+.++++++++.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 5678999999999999999999999999986543 2589999999999999999999999999886543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCc
Q psy17691 218 ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPG------FADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 218 ~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~------~~~a~~~La~~~~~~g~~~ 269 (673)
..++.++|.++..+|++++|+.++++++++.+. ...++.++|.++...|+++
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 568999999999999999999999999987432 2567889999999999875
No 205
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.05 E-value=3.7e-10 Score=121.06 Aligned_cols=232 Identities=13% Similarity=0.131 Sum_probs=133.9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH--------------HHHHHcCChhhhcCChhhHH
Q psy17691 1 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLA--------------NALKEKGQINVLHKPPYKYT 66 (673)
Q Consensus 1 ~~~eAi~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la--------------~~l~~~g~~~~A~~~~~~~~ 66 (673)
++++|++.|.++ +++..+...+.++...|+.+.+..++..+ .+|.+.|++.++... ++.
T Consensus 47 ~~~eAIdsfika-----~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f-~~~- 119 (449)
T 1b89_A 47 MVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEF-ING- 119 (449)
T ss_dssp -------------------------------------------------------------------CHHHHTTT-TTC-
T ss_pred CHHHHHHHHHcC-----CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHH-HcC-
Confidence 467889999764 46678889999999988866665555444 366777777775532 211
Q ss_pred hhcCCCchhhhhhhhhhcCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 67 RELAPGNRIRIGYVSSDFGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFSYIISVLLLIQVSEAEECYNTALRLC 146 (673)
Q Consensus 67 ~~l~p~~~~~l~~~~~~l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 146 (673)
-.......+|..+...|....+ ...+... ......+.++..+|++++|+++|+++
T Consensus 120 --pn~~a~~~IGd~~~~~g~yeeA--------------~~~Y~~a-----~n~~~LA~~L~~Lg~yq~AVea~~KA---- 174 (449)
T 1b89_A 120 --PNNAHIQQVGDRCYDEKMYDAA--------------KLLYNNV-----SNFGRLASTLVHLGEYQAAVDGARKA---- 174 (449)
T ss_dssp --C----------------CTTTH--------------HHHHHHT-----TCHHHHHHHHHTTTCHHHHHHHHHHH----
T ss_pred --CcHHHHHHHHHHHHHcCCHHHH--------------HHHHHHh-----hhHHHHHHHHHHhccHHHHHHHHHHc----
Confidence 1112345566666666654433 3333322 22335567778899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 147 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGN 226 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 226 (673)
+++.+|.....++...|+++.|..+..+ +..+|++ ...+...|.+.|++++|+.++++++.+++.+...+..+|.
T Consensus 175 -~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~i 249 (449)
T 1b89_A 175 -NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAI 249 (449)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHH
T ss_pred -CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 5789999999999999999999888775 3344444 5568899999999999999999999999999999999999
Q ss_pred HHHH--cCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHcCCCc
Q psy17691 227 TLKE--MQDIQGALQCYSRAIQINP-----GFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 227 ~~~~--~g~~~eA~~~~~~Al~l~p-----~~~~a~~~La~~~~~~g~~~ 269 (673)
+|.+ .++..+.++.|.+.+.+.| .+...|..+..+|...++++
T Consensus 250 l~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d 299 (449)
T 1b89_A 250 LYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYD 299 (449)
T ss_dssp HHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 9875 4677888888888888888 88889999999999999998
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=3.5e-09 Score=114.24 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=102.9
Q ss_pred cCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCP------THADSLNNLANIKREQGYIEEATRLYLKALEVF------PEFAAAHSNLASVLQQ 196 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p------~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~------p~~~~~~~~la~~~~~ 196 (673)
.|++++|+.++++++...+ ....++.++|.+|..+|++++|...+++++... +....++.++|.+|..
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 6799999999999998742 336789999999999999999999999998762 3347799999999999
Q ss_pred cCCHHHHHHHHHHHHHhCC---CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 197 QGKLTDALLHYKEAIRIQP---SF----ADAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 197 ~g~~~eA~~~~~~al~~~p---~~----~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
+|++++|...|++++...+ .. ...+..+|.++...|++++|..+|.++++.
T Consensus 188 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 188 LRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999998742 22 356788999999999999999999999875
No 207
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.00 E-value=2e-09 Score=91.65 Aligned_cols=87 Identities=18% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHH
Q psy17691 180 FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP--GFADAHSN 257 (673)
Q Consensus 180 ~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p--~~~~a~~~ 257 (673)
+|+++.+++++|.++...|++++|+..|+++++++|+++.+|.++|.+|..+|++++|+++|++++++.| .+......
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 4566666666666666666666666666666666666666666666666666666666666666666544 23444444
Q ss_pred HHHHHHHcC
Q psy17691 258 LASIHKDSG 266 (673)
Q Consensus 258 La~~~~~~g 266 (673)
+..++...+
T Consensus 83 l~~~l~~~~ 91 (100)
T 3ma5_A 83 LQDAKLKAE 91 (100)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcc
Confidence 444444433
No 208
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.99 E-value=1.5e-09 Score=119.68 Aligned_cols=123 Identities=14% Similarity=-0.009 Sum_probs=106.1
Q ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCC---HHHHHH
Q psy17691 126 VLLLIQVSEAEECYNTALRL-----CPTH---ADSLNNLANIKREQGYIEEATRLYLKALEV-----FPEF---AAAHSN 189 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~ 189 (673)
+..+|+|++|+..|++++++ .|++ ..++.+||.+|..+|+|++|+.++++++++ .|++ ...+++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 44589999999999999997 3444 567999999999999999999999999986 3444 567999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIRI-----QPSF---ADAYSNMGNTLKEMQDIQGALQCYSRAIQIN 248 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~ 248 (673)
||.+|..+|++++|+..|++|+++ .|++ .+...+++.++.+++++++|...|+++.+..
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999986 4555 4567899999999999999999999987643
No 209
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.99 E-value=1.3e-09 Score=126.49 Aligned_cols=171 Identities=8% Similarity=-0.031 Sum_probs=122.2
Q ss_pred ccccccCC--CCCcEEEecCCccc--ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhh
Q psy17691 464 TSRQQYGL--PEDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVL 539 (673)
Q Consensus 464 ~~r~~~~l--~~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (673)
..|+.+|+ +.+.+++++++++. |..+.+++++.++.+..|+.+|+++|...... .. ..
T Consensus 559 ~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~--~~------------~~---- 620 (816)
T 3s28_A 559 ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKE--SK------------DN---- 620 (816)
T ss_dssp CBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSC--CC------------CH----
T ss_pred hHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCccc--cc------------ch----
Confidence 35677788 67777888888664 88999999999998888999999998210000 00 00
Q ss_pred hccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccC----cChHHHHHhcc-cccEEecC-CCCCCcchhhhhhhc
Q psy17691 540 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV----AAKEEHVRRGQ-LADVCLDT-PLCNGHTTSMDVLWT 613 (673)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~----~~~~~~~~~~~-~~Di~Ld~-~p~~g~~t~~eal~~ 613 (673)
-.....+.+++.+++.|+ .++|.|+|. .+.++....|. .+||++-| ..++-|+|.+|||++
T Consensus 621 ------------e~~~~~~~L~~li~~lgL-~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~ 687 (816)
T 3s28_A 621 ------------EEKAEMKKMYDLIEEYKL-NGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC 687 (816)
T ss_dssp ------------HHHHHHHHHHHHHHHTTC-BBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT
T ss_pred ------------hhHHHHHHHHHHHHHcCC-CCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc
Confidence 001135678888999999 499999994 44578888887 68999765 567889999999999
Q ss_pred CCceeecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhc----CCHHHHHHHHhhh
Q psy17691 614 GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG----TDRDYCEKALLYH 671 (673)
Q Consensus 614 GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la----~d~~~~~~~~~~~ 671 (673)
|+|||+-....... ++ .-|-..++.. |.+++.+...++. .|++.+++++...
T Consensus 688 G~PVIasd~GG~~E-----iV-~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~a 745 (816)
T 3s28_A 688 GLPTFATCKGGPAE-----II-VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGG 745 (816)
T ss_dssp TCCEEEESSBTHHH-----HC-CBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEeCCCChHH-----HH-ccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999865433222 11 1244555554 7899998886665 8999998887653
No 210
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.98 E-value=8.5e-10 Score=93.12 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 154 NNLANIKREQGYIEEATRLYLKALEVFPEFAA-AHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQ 232 (673)
Q Consensus 154 ~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~-~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g 232 (673)
+.+|.++...|++++|+..|+++++.+|++.. +++++|.++...|++++|++.|+++++++|++..++.+ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 45677777777777777777777777777777 77777777777777777777777777777777766643 4
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q psy17691 233 DIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 233 ~~~eA~~~~~~Al~l~p~~ 251 (673)
.+.+++.+|++++..+|++
T Consensus 76 ~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHhccCccc
Confidence 5666777777776666554
No 211
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.95 E-value=3.2e-09 Score=90.38 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=73.3
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHH
Q psy17691 145 LCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS--FADAYS 222 (673)
Q Consensus 145 ~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~--~~~~~~ 222 (673)
.+|+++.+++.+|.+|..+|++++|+.+|+++++++|++..+|+++|.+|...|++++|++.|++++++.|. +.....
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999998654 344444
Q ss_pred HHHHHHHHc
Q psy17691 223 NMGNTLKEM 231 (673)
Q Consensus 223 ~lg~~~~~~ 231 (673)
.+..++...
T Consensus 82 ~l~~~l~~~ 90 (100)
T 3ma5_A 82 ELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 555554443
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.94 E-value=1.2e-08 Score=104.71 Aligned_cols=184 Identities=15% Similarity=0.034 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhhc
Q psy17691 5 AIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPDAYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSDF 84 (673)
Q Consensus 5 Ai~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~l 84 (673)
|+..+++.++..+.+..++..+|.++...|+++.+..++..+.
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i------------------------------------- 127 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGI------------------------------------- 127 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHh-------------------------------------
Confidence 6778888888777778888999999999997555555444331
Q ss_pred CCCcccccccccCCCCchhHHHHHHHhcCC--CChhHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCC----CHHHHHHH-
Q psy17691 85 GNHPTSHLMQSVPGMHNKSRVEIFCYALSP--DDGTTF-SYIISVLLLIQVSEAEECYNTALRLCPT----HADSLNNL- 156 (673)
Q Consensus 85 ~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p--~~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~----~~~a~~~L- 156 (673)
..+| +..+++ ..+..++.+|+.+.|.+.++++.+.+|+ +..+...+
T Consensus 128 --------------------------~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 128 --------------------------DNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp --------------------------TSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred --------------------------ccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 0111 233344 3345667799999999999999999983 23334444
Q ss_pred -HHHHHHcC--CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHH
Q psy17691 157 -ANIKREQG--YIEEATRLYLKALEVFPE--FAAAHSNLASVLQQQGKLTDALLHYKEAIRI----------QPSFADAY 221 (673)
Q Consensus 157 -g~~~~~~g--~~~eA~~~~~~al~~~p~--~~~~~~~la~~~~~~g~~~eA~~~~~~al~~----------~p~~~~~~ 221 (673)
|++....| ++.+|...|+++.+..|+ ....+++ ++..+|++++|.+.++++++. +|++++++
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 55566667 999999999999998887 3444444 899999999999999988776 48899999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 222 SNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHS 256 (673)
Q Consensus 222 ~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~ 256 (673)
.|+..+...+|+ +|.++++++.+.+|+++.+.-
T Consensus 259 aN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d 291 (310)
T 3mv2_B 259 ANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKH 291 (310)
T ss_dssp HHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHH
Confidence 999999999998 999999999999999987643
No 213
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.94 E-value=4.1e-09 Score=116.36 Aligned_cols=156 Identities=15% Similarity=-0.020 Sum_probs=116.4
Q ss_pred ccccccCCCC--CcEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhh
Q psy17691 464 TSRQQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVL 539 (673)
Q Consensus 464 ~~r~~~~l~~--~~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (673)
..|+++|++. +.+++++++++ .|..+.++++|.++.+ ++.+|+++|.
T Consensus 279 ~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~--------------------------- 329 (485)
T 2qzs_A 279 QLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGA--------------------------- 329 (485)
T ss_dssp HHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEE---------------------------
T ss_pred HHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeC---------------------------
Confidence 4577889986 66777777765 5889999999999876 5899999881
Q ss_pred hccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEE-eccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCce
Q psy17691 540 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPV 617 (673)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~-~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPv 617 (673)
.+....+.+++...+.| ++|+ |.|. +.++....|..+|+++-|. .++.|++.+|||++|+||
T Consensus 330 ------------g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~Pv 393 (485)
T 2qzs_A 330 ------------GDPVLQEGFLAAAAEYP---GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLP 393 (485)
T ss_dssp ------------ECHHHHHHHHHHHHHST---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEE
T ss_pred ------------CchHHHHHHHHHHHhCC---CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCE
Confidence 01123567778777775 6886 7887 6677778999999996654 668899999999999999
Q ss_pred eecCCCcchhhhHHHHHHhcC---------CCccccC--CHHHHHHHHHHhc---CCHHHHHHHHhh
Q psy17691 618 VTLPGETLASRVAASQLATLG---------CPELIAR--THKEYQDIAIRLG---TDRDYCEKALLY 670 (673)
Q Consensus 618 vt~~g~~~~~r~~~~~l~~~g---------l~~~ia~--~~~~yv~~a~~la---~d~~~~~~~~~~ 670 (673)
|+-....+.. ++ .-| -..++.. |.++..+...++. .|++.+++++..
T Consensus 394 I~s~~gg~~e-----~v-~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 454 (485)
T 2qzs_A 394 LVRRTGGLAD-----TV-SDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQ 454 (485)
T ss_dssp EEESSHHHHH-----HC-CBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EECCCCCccc-----ee-ccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9865421111 11 112 4555543 8999999999988 899999888754
No 214
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.94 E-value=5.1e-08 Score=111.59 Aligned_cols=202 Identities=12% Similarity=0.038 Sum_probs=160.8
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCCcHH-HHHHHHHHHHHcCChhhhcCChhhHHhhcCCCchhhhhhhhhh
Q psy17691 5 AIDTYRRAIELQPNFPDAYCNLANALKEKGQPNFPD-AYCNLANALKEKGQINVLHKPPYKYTRELAPGNRIRIGYVSSD 83 (673)
Q Consensus 5 Ai~~~~kAL~l~P~~~~a~~~Lg~~~~~~g~~~~a~-a~~~la~~l~~~g~~~~A~~~~~~~~~~l~p~~~~~l~~~~~~ 83 (673)
....|+++|...|.+++.|+..+..+...|+.+.+. ..+..|.
T Consensus 328 v~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi------------------------------------ 371 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQ------------------------------------ 371 (679)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHH------------------------------------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHH------------------------------------
Confidence 457799999999999999999998888888654442 3333332
Q ss_pred cCCCcccccccccCCCCchhHHHHHHHhcCCCChhHHH-HHHHHHHcCCHHHHHHHHHHHHHh-----------CCC---
Q psy17691 84 FGNHPTSHLMQSVPGMHNKSRVEIFCYALSPDDGTTFS-YIISVLLLIQVSEAEECYNTALRL-----------CPT--- 148 (673)
Q Consensus 84 l~~~~~a~~~~~~~~~~~~~a~~~~~~~l~p~~~~~~~-~~~~~~~~g~~~~A~~~~~~al~~-----------~p~--- 148 (673)
...|.....|. ++......|++++|..+|+++++. .|.
T Consensus 372 ---------------------------~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~ 424 (679)
T 4e6h_A 372 ---------------------------QCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNES 424 (679)
T ss_dssp ---------------------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred ---------------------------HhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchh
Confidence 23455555554 344445688999999999999975 253
Q ss_pred --------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCH
Q psy17691 149 --------HADSLNNLANIKREQGYIEEATRLYLKALEV-FPEFAAAHSNLASVLQQQGK-LTDALLHYKEAIRIQPSFA 218 (673)
Q Consensus 149 --------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-~p~~~~~~~~la~~~~~~g~-~~eA~~~~~~al~~~p~~~ 218 (673)
...+|...+....+.|+.+.|...|.+|++. .+....+|...+.+....++ ++.|.+.|+++++..|+++
T Consensus 425 ~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~ 504 (679)
T 4e6h_A 425 AINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDG 504 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCH
T ss_pred hhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCch
Confidence 3457889999999999999999999999998 44556778877877777654 9999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCCc
Q psy17691 219 DAYSNMGNTLKEMQDIQGALQCYSRAIQINPG---FADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 219 ~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~---~~~a~~~La~~~~~~g~~~ 269 (673)
..|..++......|+.+.|...|++|+...|+ ....|..........|+.+
T Consensus 505 ~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~ 558 (679)
T 4e6h_A 505 EYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLN 558 (679)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 99999999999999999999999999999883 5677888888888888876
No 215
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.93 E-value=4.7e-09 Score=115.87 Aligned_cols=157 Identities=13% Similarity=0.017 Sum_probs=116.2
Q ss_pred ccccccCCCCC-cEEEecCCcc--cccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhh
Q psy17691 464 TSRQQYGLPED-AIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLK 540 (673)
Q Consensus 464 ~~r~~~~l~~~-~~~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (673)
..|+++|++.+ .+++++++++ .|..+.++++|.++.+ ++.+|+++|.
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~---------------------------- 328 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGA---------------------------- 328 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEEC----------------------------
T ss_pred HHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeC----------------------------
Confidence 46778899975 5677777766 4888999999999876 5899999881
Q ss_pred ccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEE-eccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCcee
Q psy17691 541 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVV 618 (673)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~-~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvv 618 (673)
.+...++.+++...++| ++|+ |.|. +.++....|..+|+++-|. .++.|++.+|||++|+|||
T Consensus 329 -----------g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI 393 (485)
T 1rzu_A 329 -----------GDVALEGALLAAASRHH---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393 (485)
T ss_dssp -----------BCHHHHHHHHHHHHHTT---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEE
T ss_pred -----------CchHHHHHHHHHHHhCC---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEE
Confidence 01123567777777775 6887 7887 6667678999999997654 6788999999999999999
Q ss_pred ecCCCcchhhhHHHHHHhcC---------CCccccC--CHHHHHHHHHHhc---CCHHHHHHHHhhh
Q psy17691 619 TLPGETLASRVAASQLATLG---------CPELIAR--THKEYQDIAIRLG---TDRDYCEKALLYH 671 (673)
Q Consensus 619 t~~g~~~~~r~~~~~l~~~g---------l~~~ia~--~~~~yv~~a~~la---~d~~~~~~~~~~~ 671 (673)
+-....... ++. -| -..++.. |.++..+...++. .|++.+++++...
T Consensus 394 ~s~~gg~~e-----~v~-~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 394 VARTGGLAD-----TVI-DANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp EESSHHHHH-----HCC-BCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EeCCCChhh-----eec-ccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 865421111 111 12 3455543 8899999999988 8999999887643
No 216
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.85 E-value=5e-09 Score=88.26 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=80.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCPTHAD-SLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGK 199 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 199 (673)
..+..++..|++++|+..|+++++.+|++.. +++.+|.++..+|++++|+.+|+++++++|++..++.+ +.
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~ 76 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KM 76 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HH
Confidence 4556677899999999999999999999999 99999999999999999999999999999999988755 66
Q ss_pred HHHHHHHHHHHHHhCCCC
Q psy17691 200 LTDALLHYKEAIRIQPSF 217 (673)
Q Consensus 200 ~~eA~~~~~~al~~~p~~ 217 (673)
+.+|+..|++++..+|++
T Consensus 77 ~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 77 VMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHhccCccc
Confidence 788899999888887765
No 217
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.83 E-value=1.8e-08 Score=107.32 Aligned_cols=152 Identities=10% Similarity=0.053 Sum_probs=110.1
Q ss_pred cccccC-CCC-CcEEEecCCccc---ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhh
Q psy17691 465 SRQQYG-LPE-DAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVL 539 (673)
Q Consensus 465 ~r~~~~-l~~-~~~~~~~~~~~~---K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (673)
.|+++| ++. +.+++++++++. |..+.+++++.++.++.|+.++++...
T Consensus 194 ~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g--------------------------- 246 (384)
T 1vgv_A 194 LAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVH--------------------------- 246 (384)
T ss_dssp HHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECC---------------------------
T ss_pred HHHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcC---------------------------
Confidence 466788 854 556777888765 667889999999999899998887430
Q ss_pred hccCchhhhhccCChh-hhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCcee
Q psy17691 540 KAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVV 618 (673)
Q Consensus 540 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvv 618 (673)
+++ ..+.+++.+ +. .++|.|.|.++.++...+|..+|+++-+. |+ +++|||++|+|||
T Consensus 247 -------------~~~~~~~~l~~~~---~~-~~~v~~~g~~~~~~~~~~~~~ad~~v~~S---g~-~~lEA~a~G~PvI 305 (384)
T 1vgv_A 247 -------------LNPNVREPVNRIL---GH-VKNVILIDPQEYLPFVWLMNHAWLILTDS---GG-IQEEAPSLGKPVL 305 (384)
T ss_dssp -------------BCHHHHHHHHHHH---TT-CTTEEEECCCCHHHHHHHHHHCSEEEESS---ST-GGGTGGGGTCCEE
T ss_pred -------------CCHHHHHHHHHHh---hc-CCCEEEeCCCCHHHHHHHHHhCcEEEECC---cc-hHHHHHHcCCCEE
Confidence 121 233344432 32 36899999888889999999999997654 44 4899999999999
Q ss_pred ecCC-CcchhhhHHHHHHhcCCCcccc-CCHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 619 TLPG-ETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 619 t~~g-~~~~~r~~~~~l~~~gl~~~ia-~~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
+.+. .... .++ .-| ..++. .|.++..+...++.+|++.+++++...
T Consensus 306 ~~~~~~~~~-----e~v-~~g-~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 306 VMRDTTERP-----EAV-TAG-TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp EESSCCSCH-----HHH-HHT-SEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSC
T ss_pred EccCCCCcc-----hhh-hCC-ceEEeCCCHHHHHHHHHHHHhChHHHhhhhhcc
Confidence 8753 2211 123 336 44444 589999999999999999999987653
No 218
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.3e-08 Score=106.53 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=124.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCPTHA-----------------DSLNNLANIKREQGYIEEATRLYLKALEVFPE 182 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~-----------------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~ 182 (673)
+..+..+...|++++|++.|.++++..|+.. .++.++|.+|..+|++++|.+++++++...+.
T Consensus 8 l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 8 LEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3455667788999999999999999887642 36889999999999999999999999987665
Q ss_pred C------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy17691 183 F------AAAHSNLASVLQQQGKLTDALLHYKEAIRIQP------SFADAYSNMGNTLKEMQDIQGALQCYSRAIQI--- 247 (673)
Q Consensus 183 ~------~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l--- 247 (673)
. ..+..+++.++...|++++|+.++++++...+ ....++.++|.+|..+|++++|..++++++..
T Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~ 167 (434)
T 4b4t_Q 88 FAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKK 167 (434)
T ss_dssp SCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHh
Confidence 4 23566788888889999999999999987632 23678899999999999999999999999876
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCCc
Q psy17691 248 ---NPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 248 ---~p~~~~a~~~La~~~~~~g~~~ 269 (673)
.+....++.+++.+|...|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (434)
T 4b4t_Q 168 LDDKPSLVDVHLLESKVYHKLRNLA 192 (434)
T ss_dssp SSCSTHHHHHHHHHHHHHHHTTCHH
T ss_pred cccchhHHHHHHHHHHHHHHhCcHH
Confidence 2334678999999999999987
No 219
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.81 E-value=2.6e-08 Score=104.44 Aligned_cols=128 Identities=16% Similarity=0.056 Sum_probs=97.6
Q ss_pred EecCCc--ccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChh
Q psy17691 478 YCNFNQ--LYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAV 555 (673)
Q Consensus 478 ~~~~~~--~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
++++++ ..|..+.+++++.++ +.+|+++| .++
T Consensus 165 i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G-----------------------------------------~g~ 198 (342)
T 2iuy_A 165 LLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAG-----------------------------------------PAW 198 (342)
T ss_dssp EEEESCCCGGGTHHHHHHHHHHH-----TCCEEEES-----------------------------------------CCC
T ss_pred EEEEeccccccCHHHHHHHHHhc-----CcEEEEEe-----------------------------------------Ccc
Confidence 444444 458888999998876 78899888 334
Q ss_pred hhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-----------CCCCcchhhhhhhcCCceeecCCCc
Q psy17691 556 GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-----------LCNGHTTSMDVLWTGTPVVTLPGET 624 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-----------p~~g~~t~~eal~~GvPvvt~~g~~ 624 (673)
..+.+++..+..| ++|.|+|.++.++....|+.+|+++-|. .++.|++.+|||++|+|||+-....
T Consensus 199 ~~~~l~~~~~~~~---~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~ 275 (342)
T 2iuy_A 199 EPEYFDEITRRYG---STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC 275 (342)
T ss_dssp CHHHHHHHHHHHT---TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT
T ss_pred cHHHHHHHHHHhC---CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC
Confidence 4566777777777 7999999999999999999999997764 4678999999999999999976543
Q ss_pred chhhhHHHHHHhc-CCCccccC-CHHHHHHHHHHhcC
Q psy17691 625 LASRVAASQLATL-GCPELIAR-THKEYQDIAIRLGT 659 (673)
Q Consensus 625 ~~~r~~~~~l~~~-gl~~~ia~-~~~~yv~~a~~la~ 659 (673)
+.. ++... |-..++.. |.+++.+...++.+
T Consensus 276 ~~e-----~~~~~~~~~g~~~~~d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 276 LAE-----IVPSVGEVVGYGTDFAPDEARRTLAGLPA 307 (342)
T ss_dssp HHH-----HGGGGEEECCSSSCCCHHHHHHHHHTSCC
T ss_pred hHH-----HhcccCCCceEEcCCCHHHHHHHHHHHHH
Confidence 322 22221 44556666 99999999888877
No 220
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.81 E-value=8.1e-08 Score=100.38 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=109.7
Q ss_pred CCCChhHH---HHHHHHHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH-------HHHH-HHHHH--H
Q psy17691 113 SPDDGTTF---SYIISVLLL---IQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYI-------EEAT-RLYLK--A 176 (673)
Q Consensus 113 ~p~~~~~~---~~~~~~~~~---g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~-------~eA~-~~~~~--a 176 (673)
.|.+..+| ..+..++.. .+..+|+.+|++|++++|+++.++..++.+|.....+ .+++ ..++. +
T Consensus 190 ~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a 269 (372)
T 3ly7_A 190 LPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVT 269 (372)
T ss_dssp SCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHh
Confidence 45665555 333334433 3578999999999999999999999888887532111 1111 12222 2
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy17691 177 LEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFAD 253 (673)
Q Consensus 177 l~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~ 253 (673)
+..+|.++.++..++..+...|++++|+..++++++++|+ ..+|..+|.++...|++++|++.|++|+.++|....
T Consensus 270 ~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 270 LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 3567999999999999999999999999999999999975 778899999999999999999999999999998653
No 221
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.77 E-value=1.6e-07 Score=85.01 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=80.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKRE----QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ----QGKL 200 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~ 200 (673)
.+..++|+.+|+++.+. .++.++++||.+|.. .+++++|+.+|+++.+. .++.++++||.+|.. .+++
T Consensus 38 g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~ 113 (138)
T 1klx_A 38 QINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNE 113 (138)
T ss_dssp TSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCH
Confidence 44778899999999987 789999999999999 89999999999999987 789999999999999 8999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy17691 201 TDALLHYKEAIRIQPSFADAYSNMGN 226 (673)
Q Consensus 201 ~eA~~~~~~al~~~p~~~~~~~~lg~ 226 (673)
++|+++|+++.+.. ++.+..+|+.
T Consensus 114 ~~A~~~~~~Aa~~g--~~~A~~~l~~ 137 (138)
T 1klx_A 114 KQAVKTFEKACRLG--SEDACGILNN 137 (138)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHC--
T ss_pred HHHHHHHHHHHHCC--CHHHHHHHhh
Confidence 99999999999974 4566666553
No 222
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.72 E-value=2e-08 Score=110.71 Aligned_cols=115 Identities=16% Similarity=0.048 Sum_probs=95.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---H
Q psy17691 155 NLANIKREQGYIEEATRLYLKALEV-----FPEF---AAAHSNLASVLQQQGKLTDALLHYKEAIRI-----QPSF---A 218 (673)
Q Consensus 155 ~Lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~~~~al~~-----~p~~---~ 218 (673)
..+..+..+|+|++|+..+++++++ .|++ ..++.+||.+|..+|+|++|+.++++++++ .|++ .
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 3445577899999999999999987 3444 567999999999999999999999999987 4555 5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHcCCCc
Q psy17691 219 DAYSNMGNTLKEMQDIQGALQCYSRAIQI-----NPGFA---DAHSNLASIHKDSGKRG 269 (673)
Q Consensus 219 ~~~~~lg~~~~~~g~~~eA~~~~~~Al~l-----~p~~~---~a~~~La~~~~~~g~~~ 269 (673)
..+++||.+|..+|++++|+..|++|+++ -|+++ +...+|+.++.++++++
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999986 46664 45667888887777654
No 223
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.72 E-value=6.3e-08 Score=102.68 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=104.9
Q ss_pred CCCcEEEecCCccc---ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhh
Q psy17691 472 PEDAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILW 548 (673)
Q Consensus 472 ~~~~~~~~~~~~~~---K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (673)
+.+.++++++++.. |..+.++++|.++.++.|+.++++..
T Consensus 203 ~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~~~------------------------------------- 245 (375)
T 3beo_A 203 GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVYPV------------------------------------- 245 (375)
T ss_dssp TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEEEC-------------------------------------
T ss_pred cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEEeC-------------------------------------
Confidence 44566777888765 77889999999998888998866532
Q ss_pred hccCChhhhhhHHHHHHHc-CCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecC--CCcc
Q psy17691 549 LLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP--GETL 625 (673)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~-g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~--g~~~ 625 (673)
++. ..+++.+++. +. .++|.|.|..+..+....|..+|+++-+. |++++|||++|+|||+.. |. .
T Consensus 246 -----g~~-~~~~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~v~~s----g~~~lEA~a~G~Pvi~~~~~~~-~ 313 (375)
T 3beo_A 246 -----HMN-PVVRETANDILGD-YGRIHLIEPLDVIDFHNVAARSYLMLTDS----GGVQEEAPSLGVPVLVLRDTTE-R 313 (375)
T ss_dssp -----CSC-HHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHTCSEEEECC----HHHHHHHHHHTCCEEECSSCCS-C
T ss_pred -----CCC-HHHHHHHHHHhhc-cCCEEEeCCCCHHHHHHHHHhCcEEEECC----CChHHHHHhcCCCEEEecCCCC-C
Confidence 111 1233434433 32 36899999999889999999999997543 556999999999999873 32 1
Q ss_pred hhhhHHHHHHhcCCCcccc-CCHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 626 ASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 626 ~~r~~~~~l~~~gl~~~ia-~~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
. .++ .-| ..++. .|.++..+...+|.+|++.+++++...
T Consensus 314 ~-----e~v-~~g-~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~ 353 (375)
T 3beo_A 314 P-----EGI-EAG-TLKLAGTDEETIFSLADELLSDKEAHDKMSKAS 353 (375)
T ss_dssp H-----HHH-HTT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCC
T ss_pred c-----eee-cCC-ceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcC
Confidence 1 123 335 44443 699999999999999999999887543
No 224
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.66 E-value=4e-08 Score=109.80 Aligned_cols=142 Identities=11% Similarity=-0.014 Sum_probs=96.9
Q ss_pred eeccCccccccccccccCcccCcc----------cccccccccCCC--CCcEEEecCCccc--ccChhhHHHHHHHHhcc
Q psy17691 437 VLQNGLATNQTNTKTATGEEVPQS----------IVITSRQQYGLP--EDAIVYCNFNQLY--KIDPSTLQMWVNVLKAV 502 (673)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~r~~~~l~--~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~ 502 (673)
.|.||+.+..+++..-...+.... .....++.+||+ ++.++|++++|+. |..+.+++++.++++.
T Consensus 277 ~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~- 355 (536)
T 3vue_A 277 GIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE- 355 (536)
T ss_dssp ECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS-
T ss_pred EEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh-
Confidence 478888776665432211111000 012345667887 4567888888775 9999999999999875
Q ss_pred cCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcCh
Q psy17691 503 PNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK 582 (673)
Q Consensus 503 p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~ 582 (673)
+.+|++++. .++.....++..... . .+++.|.+..+.
T Consensus 356 -~~~l~l~G~---------------------------------------G~~~~~~~~~~~~~~--~-~~~v~~~~~~~~ 392 (536)
T 3vue_A 356 -DVQIVLLGT---------------------------------------GKKKFEKLLKSMEEK--Y-PGKVRAVVKFNA 392 (536)
T ss_dssp -SCEEEEECC---------------------------------------BCHHHHHHHHHHHHH--S-TTTEEEECSCCH
T ss_pred -CCeEEEEec---------------------------------------cCchHHHHHHHHHhh--c-CCceEEEEeccH
Confidence 456666651 022233344444333 3 378999999888
Q ss_pred HHHHHhcccccEEecC-CCCCCcchhhhhhhcCCceeecCC
Q psy17691 583 EEHVRRGQLADVCLDT-PLCNGHTTSMDVLWTGTPVVTLPG 622 (673)
Q Consensus 583 ~~~~~~~~~~Di~Ld~-~p~~g~~t~~eal~~GvPvvt~~g 622 (673)
++....|..+|||+-| .-++-|++.+|||++|+|||+-.-
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~ 433 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAST 433 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSC
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCC
Confidence 8888899999999664 567889999999999999998543
No 225
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.66 E-value=2.2e-08 Score=108.40 Aligned_cols=128 Identities=7% Similarity=-0.071 Sum_probs=93.7
Q ss_pred cccccChhhHHHHHHHHhcccC---eeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhh
Q psy17691 483 QLYKIDPSTLQMWVNVLKAVPN---SILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEAN 559 (673)
Q Consensus 483 ~~~K~~~~~~~~~~~il~~~p~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (673)
...|..+..+++++.+.+..|+ .+|+++| ++..+
T Consensus 252 ~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG-----------------------------------------~~~~~-- 288 (413)
T 2x0d_A 252 VKRNAFTLIVEALKIFVQKYDRSNEWKIISVG-----------------------------------------EKHKD-- 288 (413)
T ss_dssp CGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEE-----------------------------------------SCCCC--
T ss_pred hhccCHHHHHHHHHHHHHhCCCCCceEEEEEc-----------------------------------------CCchh--
Confidence 3457788889999999888886 7898887 11111
Q ss_pred HHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcC
Q psy17691 560 IQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLG 638 (673)
Q Consensus 560 ~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~g 638 (673)
.++|+ .++|.|+|.++.++....|+.+|||+-|. .++-|++.+|||++|+|||+-.|.. .. +.. -|
T Consensus 289 -----~~l~~-~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~g~-~e-----~v~-~~ 355 (413)
T 2x0d_A 289 -----IALGK-GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKYEN-KD-----LSN-WH 355 (413)
T ss_dssp -----EEEET-TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECBTT-BC-----GGG-TB
T ss_pred -----hhcCC-cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCCCc-ch-----hhh-cC
Confidence 23466 37999999999999999999999997754 4577999999999999999954421 11 122 24
Q ss_pred CCcccc--CCHHHHHHHHHHhcCCHHHHHH
Q psy17691 639 CPELIA--RTHKEYQDIAIRLGTDRDYCEK 666 (673)
Q Consensus 639 l~~~ia--~~~~~yv~~a~~la~d~~~~~~ 666 (673)
-..++. .|.+++.+...+|.+|++.+++
T Consensus 356 ~~G~lv~~~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 356 SNIVSLEQLNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp TTEEEESSCSHHHHHHHHHHHHHHTC----
T ss_pred CCEEEeCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 444432 5899999999999998887765
No 226
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.65 E-value=6.4e-08 Score=102.26 Aligned_cols=151 Identities=12% Similarity=0.062 Sum_probs=103.3
Q ss_pred ccccCCCCCcE-EEecCCcc--cccChhhHHHHHHHHhcccCee-EEeeccCCcCCCCCCCCcccccCCCCccchhhhhc
Q psy17691 466 RQQYGLPEDAI-VYCNFNQL--YKIDPSTLQMWVNVLKAVPNSI-LWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKA 541 (673)
Q Consensus 466 r~~~~l~~~~~-~~~~~~~~--~K~~~~~~~~~~~il~~~p~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (673)
|++++++.+.. ++.+.++. .|..+.+++++.++.+ +.+ ++++|
T Consensus 174 ~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G------------------------------ 220 (364)
T 1f0k_A 174 QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSG------------------------------ 220 (364)
T ss_dssp HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECC------------------------------
T ss_pred hhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcC------------------------------
Confidence 45567776543 44455544 4777777788888754 566 45555
Q ss_pred cCchhhhhccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecC
Q psy17691 542 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 621 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~ 621 (673)
++. .+.+++.+++.|+ ++|.|.|.+ ++....|..+|+++-|. ||+|++|||++|+|||+.+
T Consensus 221 -----------~~~-~~~l~~~~~~~~~--~~v~~~g~~--~~~~~~~~~ad~~v~~s---g~~~~~EAma~G~Pvi~~~ 281 (364)
T 1f0k_A 221 -----------KGS-QQSVEQAYAEAGQ--PQHKVTEFI--DDMAAAYAWADVVVCRS---GALTVSEIAAAGLPALFVP 281 (364)
T ss_dssp -----------TTC-HHHHHHHHHHTTC--TTSEEESCC--SCHHHHHHHCSEEEECC---CHHHHHHHHHHTCCEEECC
T ss_pred -----------Cch-HHHHHHHHhhcCC--CceEEecch--hhHHHHHHhCCEEEECC---chHHHHHHHHhCCCEEEee
Confidence 222 3567888888887 479999988 46667777899998763 6999999999999999986
Q ss_pred CCcch--hhhHHHHHHhcCCCccccC--C--HHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 622 GETLA--SRVAASQLATLGCPELIAR--T--HKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 622 g~~~~--~r~~~~~l~~~gl~~~ia~--~--~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
-.... ....+..+...|. .++.. + .++..+...++ |++.+++++...
T Consensus 282 ~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~ 334 (364)
T 1f0k_A 282 FQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW--SRETLLTMAERA 334 (364)
T ss_dssp CCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 54321 1222334555666 44443 2 67777777777 999998887653
No 227
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.65 E-value=3.6e-08 Score=105.24 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=103.3
Q ss_pred EEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChh
Q psy17691 476 IVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAV 555 (673)
Q Consensus 476 ~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
+++++ +..|-.+.++++|.++.++.|+.+|++++ .++
T Consensus 199 i~~~~--~~~k~~~~ll~A~~~l~~~~p~~~lvivG-----------------------------------------~g~ 235 (374)
T 2xci_A 199 IVAGS--IHTGEVEIILKAFKEIKKTYSSLKLILVP-----------------------------------------RHI 235 (374)
T ss_dssp EEEEE--ECGGGHHHHHHHHHHHHTTCTTCEEEEEE-----------------------------------------SSG
T ss_pred EEEEe--CCCchHHHHHHHHHHHHhhCCCcEEEEEC-----------------------------------------CCH
Confidence 34444 45687788999999999999999999988 344
Q ss_pred hh-hhHHHHHHHcCCCC-------CeEEeccCcChHHHHHhcccccEE-ecC-CCCCCcchhhhhhhcCCceeec-CCCc
Q psy17691 556 GE-ANIQATAQALGLDQ-------HRILFSNVAAKEEHVRRGQLADVC-LDT-PLCNGHTTSMDVLWTGTPVVTL-PGET 624 (673)
Q Consensus 556 ~~-~~~~~~~~~~g~~~-------~rv~~~~~~~~~~~~~~~~~~Di~-Ld~-~p~~g~~t~~eal~~GvPvvt~-~g~~ 624 (673)
.+ +.+++.+++.|+.. ++|.|.+.. ++....|..+||+ +-| +-.+||.+.+|||++|+|||+- ....
T Consensus 236 ~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~ 313 (374)
T 2xci_A 236 ENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHK 313 (374)
T ss_dssp GGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTT
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccC
Confidence 44 57888899999852 468887753 5778899999995 543 4346789999999999999962 1111
Q ss_pred chhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 625 LASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
+.. ....+...|. -+...|.+++.+...+|.+| +.+++|...
T Consensus 314 ~~e--~~~~~~~~G~-l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ 355 (374)
T 2xci_A 314 VND--LKEFLEKEGA-GFEVKNETELVTKLTELLSV-KKEIKVEEK 355 (374)
T ss_dssp SHH--HHHHHHHTTC-EEECCSHHHHHHHHHHHHHS-CCCCCHHHH
T ss_pred hHH--HHHHHHHCCC-EEEeCCHHHHHHHHHHHHhH-HHHHHHHHH
Confidence 111 1111222343 13347899999999999999 877666543
No 228
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.62 E-value=6.5e-07 Score=93.55 Aligned_cols=76 Identities=14% Similarity=0.049 Sum_probs=62.6
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 142 ALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFA 218 (673)
Q Consensus 142 al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~ 218 (673)
++..+|.++.++..++..+...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|+.++|...
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 34567888888888888888888888888888888888864 66778888888888888888888888888888764
No 229
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.60 E-value=4.9e-07 Score=90.78 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=71.8
Q ss_pred hCCCCHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHH
Q psy17691 145 LCPTHADSLNNLANIKRE---Q--G------YIEEATRLYLKALEVFPE--FAAAHSNLASVLQQQ-----GKLTDALLH 206 (673)
Q Consensus 145 ~~p~~~~a~~~Lg~~~~~---~--g------~~~eA~~~~~~al~~~p~--~~~~~~~la~~~~~~-----g~~~eA~~~ 206 (673)
.+|+++++++..|.+... . | ...+|...++++++++|+ +..+|..+|.+|... |+.++|.++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 356666666666555432 1 2 246677777777777777 455777777777774 777777777
Q ss_pred HHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC
Q psy17691 207 YKEAIRIQPSF-ADAYSNMGNTLKE-MQDIQGALQCYSRAIQINPG 250 (673)
Q Consensus 207 ~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~eA~~~~~~Al~l~p~ 250 (673)
|+++++++|+. ...++.+|..+.. +|++++|.++++++++.+|.
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 77777777764 7777777777766 47777777777777776554
No 230
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.55 E-value=6.2e-07 Score=81.61 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 167 EEATRLYLKALEVFPEFAAAHSNLASVLQQQG---KLTDALLHYKEAIRIQ-P-SFADAYSNMGNTLKEMQDIQGALQCY 241 (673)
Q Consensus 167 ~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g---~~~eA~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~eA~~~~ 241 (673)
..+.+.|++.++.++.+.++.+++|.++.+.+ +.++++..+++.++.+ | ++.++++++|..++++|+|++|++++
T Consensus 15 ~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 44555566666666666666666666666665 4556666666666666 5 44667777777777777777777777
Q ss_pred HHHHHhCCCCHHHHHHHHHH
Q psy17691 242 SRAIQINPGFADAHSNLASI 261 (673)
Q Consensus 242 ~~Al~l~p~~~~a~~~La~~ 261 (673)
+++|+++|++..+..-...+
T Consensus 95 ~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 95 RGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHH
Confidence 77777777776665554433
No 231
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.53 E-value=4.9e-07 Score=95.98 Aligned_cols=142 Identities=12% Similarity=0.030 Sum_probs=101.2
Q ss_pred CCcEEEecCCccc--ccChhhHHHHHHHHhcccCeeEEee-ccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhh
Q psy17691 473 EDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVPNSILWLL-KFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWL 549 (673)
Q Consensus 473 ~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~p~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (673)
.+.++++++++.. |..+.+++++.++.++.|+.++++. +
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g-------------------------------------- 238 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVH-------------------------------------- 238 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECC--------------------------------------
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECC--------------------------------------
Confidence 4456677777653 4567789999999888899888764 3
Q ss_pred ccCChh-hhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecC--CCcch
Q psy17691 550 LKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP--GETLA 626 (673)
Q Consensus 550 ~~~~~~-~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~--g~~~~ 626 (673)
++. .++.+++.+ +. .++|.|.|.++..+....|..+|+++-+. ||+ ++|||++|+|||+.. |.. .
T Consensus 239 ---~~~~~~~~l~~~~---~~-~~~v~~~g~~g~~~~~~~~~~ad~~v~~S---~g~-~lEA~a~G~PvI~~~~~~~~-~ 306 (376)
T 1v4v_A 239 ---LNPVVREAVFPVL---KG-VRNFVLLDPLEYGSMAALMRASLLLVTDS---GGL-QEEGAALGVPVVVLRNVTER-P 306 (376)
T ss_dssp ---SCHHHHHHHHHHH---TT-CTTEEEECCCCHHHHHHHHHTEEEEEESC---HHH-HHHHHHTTCCEEECSSSCSC-H
T ss_pred ---CCHHHHHHHHHHh---cc-CCCEEEECCCCHHHHHHHHHhCcEEEECC---cCH-HHHHHHcCCCEEeccCCCcc-h
Confidence 222 244455543 22 36899999888788999999999996543 555 789999999999753 221 1
Q ss_pred hhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 627 SRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 627 ~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
. +. .-|..-++..|.++..+...++.+|++.+++++..
T Consensus 307 ~-----~~-~~g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~ 344 (376)
T 1v4v_A 307 E-----GL-KAGILKLAGTDPEGVYRVVKGLLENPEELSRMRKA 344 (376)
T ss_dssp H-----HH-HHTSEEECCSCHHHHHHHHHHHHTCHHHHHHHHHS
T ss_pred h-----hh-cCCceEECCCCHHHHHHHHHHHHhChHhhhhhccc
Confidence 1 22 23422233369999999999999999999988754
No 232
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.50 E-value=3.7e-07 Score=99.02 Aligned_cols=108 Identities=11% Similarity=-0.008 Sum_probs=87.4
Q ss_pred HHHHHcCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHH
Q psy17691 158 NIKREQGYIEEATRLYLKALEV-----FPEF---AAAHSNLASVLQQQGKLTDALLHYKEAIRI-----QPSF---ADAY 221 (673)
Q Consensus 158 ~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~ 221 (673)
.-+..+|++++|+..+++++++ .|++ ..++.++|.+|..+|+|++|+.++++++++ .|++ ...+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 3456789999999999999976 3444 567899999999999999999999999976 3444 4578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHc
Q psy17691 222 SNMGNTLKEMQDIQGALQCYSRAIQI-----NPGFA---DAHSNLASIHKDS 265 (673)
Q Consensus 222 ~~lg~~~~~~g~~~eA~~~~~~Al~l-----~p~~~---~a~~~La~~~~~~ 265 (673)
++||.+|..+|++++|+.+|++|+++ -|+++ ++..+|+.+..++
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986 45554 4556777776554
No 233
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.50 E-value=2.5e-07 Score=100.40 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=89.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCC---HHHH
Q psy17691 124 ISVLLLIQVSEAEECYNTALRL-----CPTH---ADSLNNLANIKREQGYIEEATRLYLKALEV-----FPEF---AAAH 187 (673)
Q Consensus 124 ~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~ 187 (673)
..+..+|++++|+..+++++++ .|++ ..++.++|.+|..+|+|++|+.++++++++ .|++ ...+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 4455789999999999999986 3455 557899999999999999999999999976 3444 5679
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHc
Q psy17691 188 SNLASVLQQQGKLTDALLHYKEAIRI-----QPSFA---DAYSNMGNTLKEM 231 (673)
Q Consensus 188 ~~la~~~~~~g~~~eA~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~ 231 (673)
++||.+|..+|++++|+..|++|+++ .|+++ +++.+|+.+...+
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 56665 4556677766543
No 234
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.50 E-value=7.3e-07 Score=95.77 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=106.4
Q ss_pred ccccccC-CC-CCcEEEecCCc---ccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhh
Q psy17691 464 TSRQQYG-LP-EDAIVYCNFNQ---LYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIV 538 (673)
Q Consensus 464 ~~r~~~~-l~-~~~~~~~~~~~---~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (673)
..|+++| ++ .+.+++.+.+| ..|..+.+++++.++.++.|+.++++..+
T Consensus 218 ~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g-------------------------- 271 (396)
T 3dzc_A 218 TLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVH-------------------------- 271 (396)
T ss_dssp HHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECC--------------------------
T ss_pred HHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeC--------------------------
Confidence 4567889 44 45555555544 23545688999999988889988876431
Q ss_pred hhccCchhhhhccCChhhhhhHHHHHHH-cCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCce
Q psy17691 539 LKAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPV 617 (673)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPv 617 (673)
+++ .+++.+++ .+. .++|.|.+.+++.++..+|..||+++-+. ||+ ++||+++|+||
T Consensus 272 --------------~~~---~~~~~l~~~~~~-~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---Gg~-~~EA~a~G~Pv 329 (396)
T 3dzc_A 272 --------------LNP---NVREPVNKLLKG-VSNIVLIEPQQYLPFVYLMDRAHIILTDS---GGI-QEEAPSLGKPV 329 (396)
T ss_dssp --------------BCH---HHHHHHHHHTTT-CTTEEEECCCCHHHHHHHHHHCSEEEESC---SGG-GTTGGGGTCCE
T ss_pred --------------CCh---HHHHHHHHHHcC-CCCEEEeCCCCHHHHHHHHHhcCEEEECC---ccH-HHHHHHcCCCE
Confidence 111 12333333 243 36899999999889999999999996432 544 49999999999
Q ss_pred eecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 618 VTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 618 vt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
|+....+ +|. .+ ...|-.-+|..+.++.++...+|..|++.+++|+...
T Consensus 330 V~~~~~~--~~~--e~-v~~G~~~lv~~d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 330 LVMRETT--ERP--EA-VAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp EECCSSC--SCH--HH-HHHTSEEECTTCHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred EEccCCC--cch--HH-HHcCceEEcCCCHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 9864221 221 12 2346444555579999999999999999999988643
No 235
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.49 E-value=9.9e-07 Score=80.25 Aligned_cols=97 Identities=12% Similarity=-0.050 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQG---YIEEATRLYLKALEVF-P-EFAAAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g---~~~eA~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~~eA~~ 205 (673)
....+.+.|++.++.++.+.++.+++|+++.+.+ ++++++..++..++.+ | ++.+++++||..+++.|+|++|.+
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 5677888899999999999999999999999988 7779999999999998 7 568999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHH
Q psy17691 206 HYKEAIRIQPSFADAYSNMGNT 227 (673)
Q Consensus 206 ~~~~al~~~p~~~~~~~~lg~~ 227 (673)
+++++++++|++..+....-.+
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999998887655444
No 236
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.49 E-value=1.8e-06 Score=80.87 Aligned_cols=97 Identities=10% Similarity=0.153 Sum_probs=75.0
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.|.++++..+.+. |..||+++. .+|++|++||+++|+|+|+.+-. .-...-+..+...|..-++-. |.
T Consensus 67 ~~~v~~~~~~~~~~~l~-~~~ad~~I~---~~G~~t~~Ea~~~G~P~i~~p~~-~~Q~~na~~l~~~g~g~~~~~~~~~~ 141 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLG-HPKTRAFIT---HGGANGIYEAIYHGIPMVGIPLF-ADQPDNIAHMKARGAAVRVDFNTMSS 141 (170)
T ss_dssp CTTEEEESSCCHHHHHT-STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHTTTSEEECCTTTCCH
T ss_pred CCcEEEecCCCHHHHhc-CCCcCEEEE---cCCccHHHHHHHcCCCEEeccch-hhHHHHHHHHHHcCCeEEeccccCCH
Confidence 46899999999877765 489999995 57899999999999999998753 112334566777776554432 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
++..+...++.+|++.++++++..+
T Consensus 142 ~~l~~~i~~ll~~~~~~~~a~~~~~ 166 (170)
T 2o6l_A 142 TDLLNALKRVINDPSYKENVMKLSR 166 (170)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 9999999999999999988876543
No 237
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.48 E-value=6.1e-07 Score=75.26 Aligned_cols=71 Identities=18% Similarity=0.049 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 146 CPTHADSLNNLANIKREQGY---IEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS 216 (673)
Q Consensus 146 ~p~~~~a~~~Lg~~~~~~g~---~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~ 216 (673)
+|++++++..+|.+++..++ .++|...++++++++|++..+++.+|..+++.|+|++|+.+++++++.+|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 34555555555555544333 455555555555555555555555555555555555555555555555544
No 238
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.47 E-value=7.2e-07 Score=74.81 Aligned_cols=72 Identities=18% Similarity=0.095 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 180 FPEFAAAHSNLASVLQQQGK---LTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 180 ~p~~~~~~~~la~~~~~~g~---~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
+|+++..+..+|.+++..++ .++|...++++++++|+++.++..+|..+.+.|+|++|+.+|+++++.+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999987766 7999999999999999999999999999999999999999999999999884
No 239
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.47 E-value=5e-07 Score=97.93 Aligned_cols=93 Identities=12% Similarity=-0.003 Sum_probs=78.8
Q ss_pred HcCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHH
Q psy17691 162 EQGYIEEATRLYLKALEV-----FPEF---AAAHSNLASVLQQQGKLTDALLHYKEAIRI-----QPSF---ADAYSNMG 225 (673)
Q Consensus 162 ~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~lg 225 (673)
..|+|++|+..|++++++ .|++ ..++.+||.+|..+|+|++|+.++++++++ .|++ +..+++||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 468899999999999986 4555 567899999999999999999999999986 3444 45789999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Q psy17691 226 NTLKEMQDIQGALQCYSRAIQI-----NPGFADA 254 (673)
Q Consensus 226 ~~~~~~g~~~eA~~~~~~Al~l-----~p~~~~a 254 (673)
.+|..+|++++|+..|++|+++ -|+++..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999986 4666654
No 240
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.45 E-value=6.1e-07 Score=97.20 Aligned_cols=93 Identities=13% Similarity=-0.061 Sum_probs=80.3
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRL-----CPTH---ADSLNNLANIKREQGYIEEATRLYLKALEV-----FPEF---AAAHSNLAS 192 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~-----~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~~~~~la~ 192 (673)
.|+|++|+..|++++++ .|++ ..++.+||.+|..+|+|++|+.++++++++ .|++ ...+++||.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 57899999999999996 4555 457889999999999999999999999986 3444 567999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH
Q psy17691 193 VLQQQGKLTDALLHYKEAIRI-----QPSFADAY 221 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~-----~p~~~~~~ 221 (673)
+|..+|++++|+..|++|+++ .|+++..-
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 999999999999999999987 57776543
No 241
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.42 E-value=2.1e-06 Score=73.41 Aligned_cols=76 Identities=21% Similarity=0.240 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVF-------PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYS 222 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 222 (673)
+.-.+.+|..++.+++|..|+.+|++|++.. +....++.++|.++.++|++++|+.+++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3445566666666666666666666666542 123455555555555555555555555555555555555555
Q ss_pred HHH
Q psy17691 223 NMG 225 (673)
Q Consensus 223 ~lg 225 (673)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 242
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.42 E-value=3.9e-06 Score=95.98 Aligned_cols=161 Identities=8% Similarity=-0.026 Sum_probs=100.0
Q ss_pred HHhcCCCChhHHHHHHHHH-HcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------
Q psy17691 109 CYALSPDDGTTFSYIISVL-LLIQVSEAE-ECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEV------- 179 (673)
Q Consensus 109 ~~~l~p~~~~~~~~~~~~~-~~g~~~~A~-~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------- 179 (673)
++...|..+..|.....+. ..|+.++|. ..|++|+...|.+...|..++......|++++|.+.|+++++.
T Consensus 335 aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~ 414 (679)
T 4e6h_A 335 AAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAA 414 (679)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhh
Confidence 4445566666664444433 356666665 7777777777766666667777777777777777777776654
Q ss_pred ----CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHH
Q psy17691 180 ----FPE-----------FAAAHSNLASVLQQQGKLTDALLHYKEAIRI-QPSFADAYSNMGNTLKEMQD-IQGALQCYS 242 (673)
Q Consensus 180 ----~p~-----------~~~~~~~la~~~~~~g~~~eA~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~-~~eA~~~~~ 242 (673)
.|. ...+|..++....+.|+.+.|.+.|.+|++. .+.....|...+.+..+.++ .+.|...|+
T Consensus 415 ~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife 494 (679)
T 4e6h_A 415 LMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLE 494 (679)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHH
T ss_pred hhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 132 2345666666666666677777777777665 33344556555555555443 667777777
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 243 RAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 243 ~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
++++..|+++..|..++......|+.+
T Consensus 495 ~~Lk~~p~~~~~w~~y~~fe~~~~~~~ 521 (679)
T 4e6h_A 495 LGLKYFATDGEYINKYLDFLIYVNEES 521 (679)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHCCCchHHHHHHHHHHHhCCCHH
Confidence 777777776666666666666666544
No 243
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.41 E-value=2.4e-06 Score=73.12 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRIQ-------PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSN 257 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~ 257 (673)
.-.+.+|..++..|+|..|+..|++|++.. .....++.++|.++.++|++++|+.+++++++++|++..+..|
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n 85 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhh
Confidence 345677778888888888888888777752 2346677778888888888888888888888888887777777
Q ss_pred HHH
Q psy17691 258 LAS 260 (673)
Q Consensus 258 La~ 260 (673)
++.
T Consensus 86 ~~~ 88 (104)
T 2v5f_A 86 LKY 88 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 244
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=98.39 E-value=1.1e-06 Score=96.59 Aligned_cols=181 Identities=12% Similarity=0.021 Sum_probs=112.5
Q ss_pred eeccCccccccccccccCcccCcccccccccccCCCCCcEEEecCCccc--ccChhhHHHHHHHHhcccC----eeEEee
Q psy17691 437 VLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVPN----SILWLL 510 (673)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~p~----~~l~~~ 510 (673)
++.||+.+..+.+....+. . .. ....|+++| +..++++++|+. |..+..++++.++++..|+ .+|+++
T Consensus 223 vip~GID~~~f~~~~~~~~-~-~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~v 296 (482)
T 1uqt_A 223 VYPIGIEPKEIAKQAAGPL-P-PK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQI 296 (482)
T ss_dssp ECCCCCCHHHHHHHHHSCC-C-HH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEE
T ss_pred EEeccCCHHHHHHHhcCcc-h-HH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEE
Confidence 4677876654432211000 0 00 124566776 456677778765 9999999999999999986 568877
Q ss_pred ccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhh----hhhHHHHHHH----cCCC-CCeEE-eccCc
Q psy17691 511 KFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVG----EANIQATAQA----LGLD-QHRIL-FSNVA 580 (673)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~g~~-~~rv~-~~~~~ 580 (673)
+.+..+ +++. ++.+++...+ .|.. -..|+ |.|.+
T Consensus 297 G~p~~~------------------------------------~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v 340 (482)
T 1uqt_A 297 APTSRG------------------------------------DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340 (482)
T ss_dssp CCBCST------------------------------------TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCC
T ss_pred ECCCcc------------------------------------chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCC
Confidence 732111 1222 2233333332 2331 12466 56889
Q ss_pred ChHHHHHhcccccEEec-CCCCCCcchhhhhhhcCC-----ceeecCCCcchhhhHHHHHHhcCCCcccc--CCHHHHHH
Q psy17691 581 AKEEHVRRGQLADVCLD-TPLCNGHTTSMDVLWTGT-----PVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQD 652 (673)
Q Consensus 581 ~~~~~~~~~~~~Di~Ld-~~p~~g~~t~~eal~~Gv-----Pvvt~~g~~~~~r~~~~~l~~~gl~~~ia--~~~~~yv~ 652 (673)
+.++..++|+.+|||+- |.-++=|.|.+|||++|+ |||+-.-..... .+. ..++. .|.++..+
T Consensus 341 ~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~--------~l~-~g~lv~p~d~~~lA~ 411 (482)
T 1uqt_A 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN--------ELT-SALIVNPYDRDEVAA 411 (482)
T ss_dssp CHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG--------TCT-TSEEECTTCHHHHHH
T ss_pred CHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH--------HhC-CeEEECCCCHHHHHH
Confidence 99999999999999955 567788999999999997 666533111111 111 33444 38899999
Q ss_pred HHHHhcCC-HHHHHHHH
Q psy17691 653 IAIRLGTD-RDYCEKAL 668 (673)
Q Consensus 653 ~a~~la~d-~~~~~~~~ 668 (673)
...++.++ ++.++++.
T Consensus 412 ai~~lL~~~~~~r~~~~ 428 (482)
T 1uqt_A 412 ALDRALTMSLAERISRH 428 (482)
T ss_dssp HHHHHHTCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHH
Confidence 88888885 55555443
No 245
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.34 E-value=1.3e-06 Score=93.28 Aligned_cols=142 Identities=14% Similarity=0.186 Sum_probs=102.0
Q ss_pred CCcEEEecCCcc--cccC-hhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhh
Q psy17691 473 EDAIVYCNFNQL--YKID-PSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWL 549 (673)
Q Consensus 473 ~~~~~~~~~~~~--~K~~-~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (673)
...+++.++++. .|-. ...++...+. +..|+.++++..
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~-------------------------------------- 257 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAV-------------------------------------- 257 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEEC--------------------------------------
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEE--------------------------------------
Confidence 445677777766 3344 7788888888 889998888765
Q ss_pred ccCChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhh
Q psy17691 550 LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 629 (673)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~ 629 (673)
.+...+.+. ++ +++|.|.+..+..+.+ ..||+++- .+|+.|++||+++|+|+|+++-. .-...
T Consensus 258 ---~~~~~~~l~------~~-~~~v~~~~~~~~~~ll---~~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~~-~~q~~ 320 (391)
T 3tsa_A 258 ---PPEHRALLT------DL-PDNARIAESVPLNLFL---RTCELVIC---AGGSGTAFTATRLGIPQLVLPQY-FDQFD 320 (391)
T ss_dssp ---CGGGGGGCT------TC-CTTEEECCSCCGGGTG---GGCSEEEE---CCCHHHHHHHHHTTCCEEECCCS-TTHHH
T ss_pred ---CCcchhhcc------cC-CCCEEEeccCCHHHHH---hhCCEEEe---CCCHHHHHHHHHhCCCEEecCCc-ccHHH
Confidence 111111121 33 4789999998865544 78999993 46667999999999999998542 22334
Q ss_pred HHHHHHhcCCCccccC-----CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 630 AASQLATLGCPELIAR-----THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 630 ~~~~l~~~gl~~~ia~-----~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
.+..+...|..-++.. |.++..+...++.+|++.+++++..
T Consensus 321 ~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~ 366 (391)
T 3tsa_A 321 YARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKL 366 (391)
T ss_dssp HHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHH
T ss_pred HHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4556777787666654 7899999999999999999888754
No 246
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.33 E-value=6.2e-07 Score=96.67 Aligned_cols=121 Identities=9% Similarity=0.011 Sum_probs=91.5
Q ss_pred EEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChh
Q psy17691 476 IVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAV 555 (673)
Q Consensus 476 ~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
.++++++++.+.-.- +..+.+..|+.+|+++| +++
T Consensus 223 ~~i~~vGrl~~~Kg~----~~~l~~~~~~~~l~ivG-----------------------------------------~g~ 257 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----FVVASKAFPQVTFHVIG-----------------------------------------SGM 257 (406)
T ss_dssp EEEEEECCTTBCHHH----HHHHHHHCTTEEEEEES-----------------------------------------CSS
T ss_pred cEEEEEeccccccCH----HHHHHHhCCCeEEEEEe-----------------------------------------Cch
Confidence 667777777643222 67777788999999988 222
Q ss_pred hhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhh-------hcCCceeecCCCcchh
Q psy17691 556 GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVL-------WTGTPVVTLPGETLAS 627 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal-------~~GvPvvt~~g~~~~~ 627 (673)
.++.|+ .++|+|+|.++.++....|+.+|+++-|. .++.|++.+||| ++|+|||+-..
T Consensus 258 --------~~~~~l-~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----- 323 (406)
T 2hy7_A 258 --------GRHPGY-GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----- 323 (406)
T ss_dssp --------CCCTTC-CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-----
T ss_pred --------HHhcCC-CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh-----
Confidence 244577 48999999999999999999999997765 667899999999 99999998543
Q ss_pred hhHHHHHHhcCCCccc---cCCHHHHHHHHHHhcCCHH
Q psy17691 628 RVAASQLATLGCPELI---ARTHKEYQDIAIRLGTDRD 662 (673)
Q Consensus 628 r~~~~~l~~~gl~~~i---a~~~~~yv~~a~~la~d~~ 662 (673)
+. -|-..++ ..|.+++.+...++.+|++
T Consensus 324 ------v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 324 ------VV-GPYKSRFGYTPGNADSVIAAITQALEAPR 354 (406)
T ss_dssp ------GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC
T ss_pred ------cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 11 1333433 3689999999888887765
No 247
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.26 E-value=5.5e-06 Score=89.62 Aligned_cols=143 Identities=18% Similarity=0.224 Sum_probs=96.3
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeE-EeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSIL-WLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
.+.++|.++++..+...+.+....+.++..|+.++ ++++
T Consensus 231 ~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G---------------------------------------- 270 (430)
T 2iyf_A 231 AEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIG---------------------------------------- 270 (430)
T ss_dssp CSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC----------------------------------------
T ss_pred CCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeC----------------------------------------
Confidence 44677888887775556666666666766666666 4444
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
++...+.+. .+ +++|.|.|+.+.. ..|..+|+++- .+|++|++||+++|+|+|+.+-.. -....+
T Consensus 271 -~~~~~~~l~------~~-~~~v~~~~~~~~~---~~l~~ad~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~-~q~~~a 335 (430)
T 2iyf_A 271 -RKVTPAELG------EL-PDNVEVHDWVPQL---AILRQADLFVT---HAGAGGSQEGLATATPMIAVPQAV-DQFGNA 335 (430)
T ss_dssp ----CGGGGC------SC-CTTEEEESSCCHH---HHHTTCSEEEE---CCCHHHHHHHHHTTCCEEECCCSH-HHHHHH
T ss_pred -CCCChHHhc------cC-CCCeEEEecCCHH---HHhhccCEEEE---CCCccHHHHHHHhCCCEEECCCcc-chHHHH
Confidence 111111121 23 4789999999866 45668999875 457789999999999999986532 122234
Q ss_pred HHHHhcCCCccccC---CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 632 SQLATLGCPELIAR---THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 632 ~~l~~~gl~~~ia~---~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
..+...|..-++.. |.++..+...++.+|++.+++++..
T Consensus 336 ~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 377 (430)
T 2iyf_A 336 DMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRI 377 (430)
T ss_dssp HHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 55666676544432 7899999999999999988877653
No 248
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.25 E-value=3e-06 Score=91.03 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=71.2
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.|.|..+.. ..+..+|+++. .+|++|++|||++|+|||+.+-. .-....+..+...|..-++.. |.
T Consensus 291 ~~~v~~~~~~~~~---~~l~~ad~~v~---~~g~~t~~Ea~a~G~P~v~~p~~-~~q~~~~~~v~~~g~g~~~~~~~~~~ 363 (412)
T 3otg_A 291 PANVRLESWVPQA---ALLPHVDLVVH---HGGSGTTLGALGAGVPQLSFPWA-GDSFANAQAVAQAGAGDHLLPDNISP 363 (412)
T ss_dssp CTTEEEESCCCHH---HHGGGCSEEEE---SCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHHHTSEEECCGGGCCH
T ss_pred CCcEEEeCCCCHH---HHHhcCcEEEE---CCchHHHHHHHHhCCCEEecCCc-hhHHHHHHHHHHcCCEEecCcccCCH
Confidence 4789999998644 45567999983 35669999999999999998654 222334556777777666543 88
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
++..+...+|.+|++.+++++..
T Consensus 364 ~~l~~ai~~ll~~~~~~~~~~~~ 386 (412)
T 3otg_A 364 DSVSGAAKRLLAEESYRAGARAV 386 (412)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHH
Confidence 99999999999999999888654
No 249
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=98.25 E-value=3.1e-06 Score=92.43 Aligned_cols=167 Identities=9% Similarity=-0.011 Sum_probs=105.8
Q ss_pred eeccCccccccccccccCcccCcccccccccccCCCCCcEEEecCCccc--ccChhhHHHHHHHHhcccCe---eEEeec
Q psy17691 437 VLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVPNS---ILWLLK 511 (673)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~--K~~~~~~~~~~~il~~~p~~---~l~~~~ 511 (673)
++.+|+.+..+.+... ......|+++| +..++.+++|+. |..+..++++ +++++.|+. +|++++
T Consensus 253 viP~GID~~~f~~~~~-------~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg 321 (496)
T 3t5t_A 253 TMPLGYSPLTLDGRNP-------QLPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRM 321 (496)
T ss_dssp ECCCCBCGGGC----C-------CCCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEE
T ss_pred EeccEeCHHHhchhhH-------HHHHHHHHHhC---CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEE
Confidence 3677887766644321 11134567777 455666667765 9999999999 999999974 577666
Q ss_pred cCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHH--------cCCCCCeEEeccCcChH
Q psy17691 512 FPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQA--------LGLDQHRILFSNVAAKE 583 (673)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~~~~rv~~~~~~~~~ 583 (673)
.|..+ +++..+.+++.+.+ .|.. +|+|++..+.+
T Consensus 322 ~psr~------------------------------------~~~~y~~l~~~l~~lv~~in~~~g~~--~V~f~g~v~~~ 363 (496)
T 3t5t_A 322 NPNRL------------------------------------YVPANADYVHRVETAVAEANAELGSD--TVRIDNDNDVN 363 (496)
T ss_dssp ECCCT------------------------------------TSHHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCHH
T ss_pred CCCCC------------------------------------CchHHHHHHHHHHHHHHHhccccCCc--CEEEeCCCCHH
Confidence 33211 12222333333322 2543 79999999999
Q ss_pred HHHHhcccccEEecC-CCCCCcchhhhhhhcC----CceeecCCCcchhhhHHHHHHhcCCCcccc--CCHHHHHHHHHH
Q psy17691 584 EHVRRGQLADVCLDT-PLCNGHTTSMDVLWTG----TPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIR 656 (673)
Q Consensus 584 ~~~~~~~~~Di~Ld~-~p~~g~~t~~eal~~G----vPvvt~~g~~~~~r~~~~~l~~~gl~~~ia--~~~~~yv~~a~~ 656 (673)
+..++|+.+|||+-| .-.+=|.+.+|||++| ++|++-.+. ++..| |-..++. .|.++..+...+
T Consensus 364 el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG------a~~~l---~~~allVnP~D~~~lA~AI~~ 434 (496)
T 3t5t_A 364 HTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG------AAEVL---GEYCRSVNPFDLVEQAEAISA 434 (496)
T ss_dssp HHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT------THHHH---GGGSEEECTTBHHHHHHHHHH
T ss_pred HHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC------CHHHh---CCCEEEECCCCHHHHHHHHHH
Confidence 999999999999765 4667899999999995 444442221 11223 2123333 378888887777
Q ss_pred hcCCH
Q psy17691 657 LGTDR 661 (673)
Q Consensus 657 la~d~ 661 (673)
+.+++
T Consensus 435 aL~m~ 439 (496)
T 3t5t_A 435 ALAAG 439 (496)
T ss_dssp HHHCC
T ss_pred HHcCC
Confidence 76654
No 250
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.23 E-value=5e-06 Score=89.44 Aligned_cols=146 Identities=13% Similarity=0.132 Sum_probs=102.8
Q ss_pred CCCcEEEecCCccc---ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhh
Q psy17691 472 PEDAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILW 548 (673)
Q Consensus 472 ~~~~~~~~~~~~~~---K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (673)
+.+.+++.+.++.. |..+.+++++.++.++.|+.++++..+
T Consensus 222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~------------------------------------ 265 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMH------------------------------------ 265 (403)
T ss_dssp TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECC------------------------------------
T ss_pred cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecC------------------------------------
Confidence 45566777777643 434788999999998899988876531
Q ss_pred hccCChhhhhhHHHHHHH-cCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchh
Q psy17691 549 LLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLAS 627 (673)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~-~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~ 627 (673)
+++ .+++.+++ .+. .++|.|.+.+++.++..+|..||+++-.. ||.+ +||+++|+|||+.+.. .+
T Consensus 266 ----~~~---~~~~~l~~~~~~-~~~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~~-~EA~a~g~PvV~~~~~--~~ 331 (403)
T 3ot5_A 266 ----LNP---AVREKAMAILGG-HERIHLIEPLDAIDFHNFLRKSYLVFTDS---GGVQ-EEAPGMGVPVLVLRDT--TE 331 (403)
T ss_dssp ----SCH---HHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHHEEEEEECC---HHHH-HHGGGTTCCEEECCSS--CS
T ss_pred ----CCH---HHHHHHHHHhCC-CCCEEEeCCCCHHHHHHHHHhcCEEEECC---ccHH-HHHHHhCCCEEEecCC--Cc
Confidence 111 12233332 344 36899999999999999999999996432 5555 9999999999997421 12
Q ss_pred hhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 628 RVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 628 r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
|.- .. ..|-.-+|..|.++.++...++..|++.+++++..
T Consensus 332 ~~e--~v-~~g~~~lv~~d~~~l~~ai~~ll~~~~~~~~m~~~ 371 (403)
T 3ot5_A 332 RPE--GI-EAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQA 371 (403)
T ss_dssp CHH--HH-HHTSEEECCSCHHHHHHHHHHHHHCHHHHHHHHHS
T ss_pred chh--he-eCCcEEEcCCCHHHHHHHHHHHHcCHHHHHHHHhh
Confidence 222 12 44633345458999999999999999999988754
No 251
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.23 E-value=4.4e-06 Score=89.18 Aligned_cols=144 Identities=13% Similarity=0.194 Sum_probs=99.3
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccC
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKF 552 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (673)
...+++.++++..+...+.+....+.++..|.-.++..+
T Consensus 230 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------------------------------------- 268 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIG----------------------------------------- 268 (402)
T ss_dssp TCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECC-----------------------------------------
T ss_pred CCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeC-----------------------------------------
Confidence 445777777777766666777777777777633333343
Q ss_pred ChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHH
Q psy17691 553 PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAAS 632 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~ 632 (673)
++...+.+. .+ +++|.+.+..+.. ..+..||+++. .+|+.|++||+++|+|+|+++-...-....+.
T Consensus 269 ~~~~~~~~~------~~-~~~v~~~~~~~~~---~ll~~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 269 GFLDPAVLG------PL-PPNVEAHQWIPFH---SVLAHARACLT---HGTTGAVLEAFAAGVPLVLVPHFATEAAPSAE 335 (402)
T ss_dssp TTSCGGGGC------SC-CTTEEEESCCCHH---HHHTTEEEEEE---CCCHHHHHHHHHTTCCEEECGGGCGGGHHHHH
T ss_pred CcCChhhhC------CC-CCcEEEecCCCHH---HHHhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCCcccHHHHHH
Confidence 111111111 12 5789999998876 55557999884 36668899999999999988652233445566
Q ss_pred HHHhcCCCccccC---CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 633 QLATLGCPELIAR---THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 633 ~l~~~gl~~~ia~---~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
.+...|..-.+.. |.++..+...+|.+|++.+++++..
T Consensus 336 ~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~ 376 (402)
T 3ia7_A 336 RVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRM 376 (402)
T ss_dssp HHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 7788887665543 7899999999999999988887654
No 252
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.21 E-value=7.7e-05 Score=82.30 Aligned_cols=60 Identities=12% Similarity=-0.057 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy17691 132 VSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLAS 192 (673)
Q Consensus 132 ~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~ 192 (673)
.+.....|++++...|..+.+|...+..+.+.|+.++|...|++|+.. |.+...|...+.
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 345678999999999999999999999999999999999999999999 988666655444
No 253
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.19 E-value=6.1e-06 Score=82.84 Aligned_cols=111 Identities=16% Similarity=0.091 Sum_probs=91.2
Q ss_pred HHHHHhcCCCChhHHHHHHHHH----H--------cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CCH
Q psy17691 106 EIFCYALSPDDGTTFSYIISVL----L--------LIQVSEAEECYNTALRLCPT--HADSLNNLANIKREQ-----GYI 166 (673)
Q Consensus 106 ~~~~~~l~p~~~~~~~~~~~~~----~--------~g~~~~A~~~~~~al~~~p~--~~~a~~~Lg~~~~~~-----g~~ 166 (673)
+......++++...+...+... . .+...+|...++++++++|+ +..+|..+|.+|... |+.
T Consensus 141 ~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ 220 (301)
T 3u64_A 141 HKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGM 220 (301)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCH
T ss_pred HHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCH
Confidence 3334445677766654333221 1 12468999999999999999 567999999999995 999
Q ss_pred HHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCC
Q psy17691 167 EEATRLYLKALEVFPEF-AAAHSNLASVLQQQ-GKLTDALLHYKEAIRIQPS 216 (673)
Q Consensus 167 ~eA~~~~~~al~~~p~~-~~~~~~la~~~~~~-g~~~eA~~~~~~al~~~p~ 216 (673)
++|.++|++|++++|+. ...++.+|..+... |++++|.++++++++..|.
T Consensus 221 ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 221 EKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 99999999999999975 99999999999884 9999999999999998876
No 254
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.12 E-value=5.6e-06 Score=88.62 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=69.4
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.|.+..+..+.+. .||+++ ..+|++|++|||++|+|+|+++-. .-....+..+...|..-++-. |.
T Consensus 283 ~~~v~~~~~~~~~~ll~---~ad~~v---~~gG~~t~~Ea~~~G~P~v~~p~~-~~q~~~a~~~~~~g~g~~~~~~~~~~ 355 (398)
T 4fzr_A 283 PEGVLAAGQFPLSAIMP---ACDVVV---HHGGHGTTLTCLSEGVPQVSVPVI-AEVWDSARLLHAAGAGVEVPWEQAGV 355 (398)
T ss_dssp CTTEEEESCCCHHHHGG---GCSEEE---ECCCHHHHHHHHHTTCCEEECCCS-GGGHHHHHHHHHTTSEEECC------
T ss_pred CCcEEEeCcCCHHHHHh---hCCEEE---ecCCHHHHHHHHHhCCCEEecCCc-hhHHHHHHHHHHcCCEEecCcccCCH
Confidence 57899999987665555 599999 367779999999999999998652 223344556777787666543 67
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
++..+...++.+|++.+++++...
T Consensus 356 ~~l~~ai~~ll~~~~~~~~~~~~~ 379 (398)
T 4fzr_A 356 ESVLAACARIRDDSSYVGNARRLA 379 (398)
T ss_dssp -CHHHHHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHH
Confidence 888888889999999998887643
No 255
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.09 E-value=2.4e-05 Score=83.17 Aligned_cols=92 Identities=14% Similarity=0.205 Sum_probs=68.4
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.+ ++.+..++ +..+|+|+-. +|+.|++||+++|+|+|+.+-.. -....+..+...|..-++.. |.
T Consensus 263 ~~~v~~-~~~~~~~~---l~~~d~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~-dq~~~a~~~~~~g~g~~~~~~~~~~ 334 (384)
T 2p6p_A 263 VPQARV-GWTPLDVV---APTCDLLVHH---AGGVSTLTGLSAGVPQLLIPKGS-VLEAPARRVADYGAAIALLPGEDST 334 (384)
T ss_dssp CTTSEE-ECCCHHHH---GGGCSEEEEC---SCTTHHHHHHHTTCCEEECCCSH-HHHHHHHHHHHHTSEEECCTTCCCH
T ss_pred CCceEE-cCCCHHHH---HhhCCEEEeC---CcHHHHHHHHHhCCCEEEccCcc-cchHHHHHHHHCCCeEecCcCCCCH
Confidence 478899 99887665 4679999963 67789999999999999997521 11233445666676544432 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
++..+...++.+|++.+++++.-
T Consensus 335 ~~l~~~i~~ll~~~~~~~~~~~~ 357 (384)
T 2p6p_A 335 EAIADSCQELQAKDTYARRAQDL 357 (384)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHH
Confidence 88888888999999998887654
No 256
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.08 E-value=2.7e-05 Score=83.58 Aligned_cols=142 Identities=15% Similarity=0.239 Sum_probs=98.7
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEe-eccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL-LKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
...+++.++++..+...+.+....+.++..| .++++ .+
T Consensus 246 ~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g---------------------------------------- 284 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRPGFFRDCARAFDGQP-WHVVMTLG---------------------------------------- 284 (415)
T ss_dssp CCCEEEEECTTTSCCCHHHHHHHHHHHTTSS-CEEEEECT----------------------------------------
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHHhcCC-cEEEEEeC----------------------------------------
Confidence 4467788888776666667777777777777 45544 33
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
++...+.+. .+ +++|.+.+..+..+++. .||+++. .+|+.|++||+++|+|+|.++- ..-....+
T Consensus 285 -~~~~~~~l~------~~-~~~v~~~~~~~~~~ll~---~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~-~~~q~~~a 349 (415)
T 3rsc_A 285 -GQVDPAALG------DL-PPNVEAHRWVPHVKVLE---QATVCVT---HGGMGTLMEALYWGRPLVVVPQ-SFDVQPMA 349 (415)
T ss_dssp -TTSCGGGGC------CC-CTTEEEESCCCHHHHHH---HEEEEEE---SCCHHHHHHHHHTTCCEEECCC-SGGGHHHH
T ss_pred -CCCChHHhc------CC-CCcEEEEecCCHHHHHh---hCCEEEE---CCcHHHHHHHHHhCCCEEEeCC-cchHHHHH
Confidence 111111111 23 47899999998775554 5999884 3666899999999999999864 22234445
Q ss_pred HHHHhcCCCccccC---CHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 632 SQLATLGCPELIAR---THKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 632 ~~l~~~gl~~~ia~---~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
..+...|..-.+.. |.++..+...++.+|++.+++++..
T Consensus 350 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 391 (415)
T 3rsc_A 350 RRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAM 391 (415)
T ss_dssp HHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 67777787655543 7899999999999999998887653
No 257
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.97 E-value=6.7e-06 Score=87.76 Aligned_cols=149 Identities=11% Similarity=0.076 Sum_probs=103.6
Q ss_pred ccccccCCCCCcEEEecCCccc-----ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhh
Q psy17691 464 TSRQQYGLPEDAIVYCNFNQLY-----KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIV 538 (673)
Q Consensus 464 ~~r~~~~l~~~~~~~~~~~~~~-----K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (673)
..|+++|++.+.+++.+.++.. |..+.+++++.++.++. +..+++..
T Consensus 193 ~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~--------------------------- 244 (385)
T 4hwg_A 193 DILDKLSLTPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFST--------------------------- 244 (385)
T ss_dssp CHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEE---------------------------
T ss_pred HHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEEC---------------------------
Confidence 4567889987777777777654 34457788888887655 55555422
Q ss_pred hhccCchhhhhccCChhhhhhHHHHHHHc-C-CC-CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCC
Q psy17691 539 LKAVPNSILWLLKFPAVGEANIQATAQAL-G-LD-QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGT 615 (673)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~-~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~Gv 615 (673)
. .++++.+++. | +. .++|.+.+.++..++..++..+|+++-. +|| .+.||+++|+
T Consensus 245 --------------~----p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~---SGg-v~~EA~alG~ 302 (385)
T 4hwg_A 245 --------------H----PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSD---SGT-ITEEASILNL 302 (385)
T ss_dssp --------------C----HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEEC---CTT-HHHHHHHTTC
T ss_pred --------------C----hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEEC---Ccc-HHHHHHHcCC
Confidence 1 1255556665 5 42 3689999999988999999999999832 255 5699999999
Q ss_pred ceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHH
Q psy17691 616 PVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKA 667 (673)
Q Consensus 616 Pvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~ 667 (673)
|||++...+- |.-. ...|-.-+|-.|.++.++...+|.+|++.++++
T Consensus 303 Pvv~~~~~te--r~e~---v~~G~~~lv~~d~~~i~~ai~~ll~d~~~~~~m 349 (385)
T 4hwg_A 303 PALNIREAHE--RPEG---MDAGTLIMSGFKAERVLQAVKTITEEHDNNKRT 349 (385)
T ss_dssp CEEECSSSCS--CTHH---HHHTCCEECCSSHHHHHHHHHHHHTTCBTTBCC
T ss_pred CEEEcCCCcc--chhh---hhcCceEEcCCCHHHHHHHHHHHHhChHHHHHh
Confidence 9999866431 2221 234654455568999999999999887765443
No 258
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.96 E-value=0.00047 Score=75.95 Aligned_cols=113 Identities=10% Similarity=-0.057 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG-KLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g-~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
..+|...+..+.+.++.+.|...|++| +..+.....|...|.+....+ +.+.|...|+++++..|+++..|..++...
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e 364 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFL 364 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 457788888888888899999999999 443345667777777766666 599999999999999999998888888888
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy17691 229 KEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~ 267 (673)
...|+.+.|...|+++ +.....|......-...|+
T Consensus 365 ~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 365 LRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp HHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC
Confidence 9999999999999997 3456666666666555564
No 259
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=97.95 E-value=2.7e-05 Score=82.45 Aligned_cols=106 Identities=11% Similarity=0.040 Sum_probs=76.5
Q ss_pred hhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCc---chhhhHHHHH
Q psy17691 558 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET---LASRVAASQL 634 (673)
Q Consensus 558 ~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~---~~~r~~~~~l 634 (673)
+.+.+.....++ ++.+.+..+ +.-.+|..+|+++. -+|++|++|++++|+|+|..+-+. -.....+..+
T Consensus 224 ~~~~~~~~~~~~---~~~v~~f~~--dm~~~l~~aDlvI~---raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 224 EITAERYRTVAV---EADVAPFIS--DMAAAYAWADLVIC---RAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp HHHHHHHHHTTC---CCEEESCCS--CHHHHHHHCSEEEE---CCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred ccccceeccccc---ccccccchh--hhhhhhccceEEEe---cCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 345566666665 355566654 34455668999984 368899999999999998775432 2344556778
Q ss_pred HhcCCCccccC---CHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 635 ATLGCPELIAR---THKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 635 ~~~gl~~~ia~---~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
...|..-+|.. |.++..+...+|.+|++.|++|+...
T Consensus 296 ~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a 335 (365)
T 3s2u_A 296 VRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQA 335 (365)
T ss_dssp HTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred HHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 88888766643 57899999999999999999998764
No 260
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=97.92 E-value=6.6e-05 Score=80.93 Aligned_cols=92 Identities=16% Similarity=0.262 Sum_probs=70.2
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.+.++.++.+ .+..+|+++. .+|.+|++||+++|||+|+++-.. -...-+..+...|..-.+.. |.
T Consensus 304 ~~~v~~~~~~~~~~---~l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~~~~~~ 376 (424)
T 2iya_A 304 PPNVEVHQWVPQLD---ILTKASAFIT---HAGMGSTMEALSNAVPMVAVPQIA-EQTMNAERIVELGLGRHIPRDQVTA 376 (424)
T ss_dssp CTTEEEESSCCHHH---HHTTCSEEEE---CCCHHHHHHHHHTTCCEEECCCSH-HHHHHHHHHHHTTSEEECCGGGCCH
T ss_pred CCCeEEecCCCHHH---HHhhCCEEEE---CCchhHHHHHHHcCCCEEEecCcc-chHHHHHHHHHCCCEEEcCcCCCCH
Confidence 47899999998764 4567999885 577899999999999999997642 22344556667777554432 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHHh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALL 669 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~ 669 (673)
++..+...++.+|++.+++++.
T Consensus 377 ~~l~~~i~~ll~~~~~~~~~~~ 398 (424)
T 2iya_A 377 EKLREAVLAVASDPGVAERLAA 398 (424)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHH
Confidence 9999988899999988877664
No 261
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=97.85 E-value=2e-05 Score=84.38 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=63.0
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH--HHHHhcCCCccccC---
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA--SQLATLGCPELIAR--- 645 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~--~~l~~~gl~~~ia~--- 645 (673)
+++|.+.+..+..+.+. .||+++. .+|+.|++|||++|+|+|+++-.. -....+ ..+...|..-++..
T Consensus 282 ~~~v~~~~~~~~~~ll~---~ad~~v~---~~G~~t~~Eal~~G~P~v~~p~~~-dq~~~a~~~~~~~~g~g~~~~~~~~ 354 (398)
T 3oti_A 282 PRNVRAVGWTPLHTLLR---TCTAVVH---HGGGGTVMTAIDAGIPQLLAPDPR-DQFQHTAREAVSRRGIGLVSTSDKV 354 (398)
T ss_dssp CTTEEEESSCCHHHHHT---TCSEEEE---CCCHHHHHHHHHHTCCEEECCCTT-CCSSCTTHHHHHHHTSEEECCGGGC
T ss_pred CCcEEEEccCCHHHHHh---hCCEEEE---CCCHHHHHHHHHhCCCEEEcCCCc-hhHHHHHHHHHHHCCCEEeeCCCCC
Confidence 57899999998777665 5999983 477789999999999999975411 111223 45666676655532
Q ss_pred CHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 646 THKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 646 ~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
+.+... ++.+|++.++++++..
T Consensus 355 ~~~~l~----~ll~~~~~~~~~~~~~ 376 (398)
T 3oti_A 355 DADLLR----RLIGDESLRTAAREVR 376 (398)
T ss_dssp CHHHHH----HHHHCHHHHHHHHHHH
T ss_pred CHHHHH----HHHcCHHHHHHHHHHH
Confidence 333333 8888999999887643
No 262
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.83 E-value=0.00015 Score=63.48 Aligned_cols=92 Identities=13% Similarity=0.009 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 131 QVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEE---ATRLYLKALEVF-P-EFAAAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~e---A~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~~eA~~ 205 (673)
....+...|++.+..++...++.+++|+++....+... ++..++..++.+ | ..-+.++.||..+++.|+|++|..
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~ 95 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 95 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHH
Confidence 44455555555555555555555555555555554444 555555555544 2 234455555555555555555555
Q ss_pred HHHHHHHhCCCCHHHHH
Q psy17691 206 HYKEAIRIQPSFADAYS 222 (673)
Q Consensus 206 ~~~~al~~~p~~~~~~~ 222 (673)
+++..|+.+|++..+..
T Consensus 96 ~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 96 YVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhCCCCHHHHH
Confidence 55555555555544443
No 263
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.79 E-value=0.00021 Score=62.51 Aligned_cols=99 Identities=11% Similarity=0.018 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHH
Q psy17691 164 GYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTD---ALLHYKEAIRIQ-P-SFADAYSNMGNTLKEMQDIQGAL 238 (673)
Q Consensus 164 g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~e---A~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~eA~ 238 (673)
.....+.+.|.+.+..++....+.+++|+++....+... ++..++..++.+ | ..-++++.||..++++|+|++|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 445677888888888888999999999999999887666 999999998887 5 46789999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 239 QCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 239 ~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
.+++..|+.+|++.++..-...+.
T Consensus 95 ~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999998876554443
No 264
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=97.78 E-value=0.00012 Score=78.62 Aligned_cols=92 Identities=13% Similarity=0.061 Sum_probs=69.9
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCcccc---CCH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia---~~~ 647 (673)
+++|.+.++.|+.+. +..||+++. .+|.+|++||+++|||+|+++-.. -....+..+...|..-.+. -|.
T Consensus 284 ~~~v~~~~~~~~~~~---l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~~~~~~ 356 (415)
T 1iir_A 284 GADCFAIGEVNHQVL---FGRVAAVIH---HGGAGTTHVAARAGAPQILLPQMA-DQPYYAGRVAELGVGVAHDGPIPTF 356 (415)
T ss_dssp GGGEEECSSCCHHHH---GGGSSEEEE---CCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECSSSSCCH
T ss_pred CCCEEEeCcCChHHH---HhhCCEEEe---CCChhHHHHHHHcCCCEEECCCCC-ccHHHHHHHHHCCCcccCCcCCCCH
Confidence 468999999997665 488999995 577789999999999999986521 1223445567777655443 278
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
++..+...++ +|++.++++++.
T Consensus 357 ~~l~~~i~~l-~~~~~~~~~~~~ 378 (415)
T 1iir_A 357 DSLSAALATA-LTPETHARATAV 378 (415)
T ss_dssp HHHHHHHHHH-TSHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCHHHHHHHHHH
Confidence 8988888889 999988887654
No 265
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.71 E-value=9.5e-05 Score=80.23 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=71.1
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.+.+..+..+. +..||+++. .+|+.|++||+++|||+|+++-.. -...-+..+...|..-.+-. |.
T Consensus 318 ~~~v~~~~~~~~~~l---l~~ad~~V~---~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~~~~~~ 390 (441)
T 2yjn_A 318 PDNVRTVGFVPMHAL---LPTCAATVH---HGGPGSWHTAAIHGVPQVILPDGW-DTGVRAQRTQEFGAGIALPVPELTP 390 (441)
T ss_dssp CSSEEECCSCCHHHH---GGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCSH-HHHHHHHHHHHHTSEEECCTTTCCH
T ss_pred CCCEEEecCCCHHHH---HhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCcc-cHHHHHHHHHHcCCEEEcccccCCH
Confidence 478999999987554 578999995 577889999999999999997631 12334455666776555542 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
++..+...++.+|++.+++++..
T Consensus 391 ~~l~~~i~~ll~~~~~~~~~~~~ 413 (441)
T 2yjn_A 391 DQLRESVKRVLDDPAHRAGAARM 413 (441)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH
Confidence 89988888999999998887653
No 266
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=97.70 E-value=0.00024 Score=76.32 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCcccc---CCH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia---~~~ 647 (673)
++++.+.++.++.+. +..||+++. .+|..|++||+++|||+|+++-.. -...-+..+...|..-.+. .|.
T Consensus 285 ~~~v~~~~~~~~~~l---l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~~~~~~ 357 (416)
T 1rrv_A 285 RDDCFAIDEVNFQAL---FRRVAAVIH---HGSAGTEHVATRAGVPQLVIPRNT-DQPYFAGRVAALGIGVAHDGPTPTF 357 (416)
T ss_dssp CTTEEEESSCCHHHH---GGGSSEEEE---CCCHHHHHHHHHHTCCEEECCCSB-THHHHHHHHHHHTSEEECSSSCCCH
T ss_pred CCCEEEeccCChHHH---hccCCEEEe---cCChhHHHHHHHcCCCEEEccCCC-CcHHHHHHHHHCCCccCCCCCCCCH
Confidence 467899999987664 478999996 678889999999999999987522 1223444566667655443 378
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
++..+...++ .|++.++++++-.
T Consensus 358 ~~l~~~i~~l-~~~~~~~~~~~~~ 380 (416)
T 1rrv_A 358 ESLSAALTTV-LAPETRARAEAVA 380 (416)
T ss_dssp HHHHHHHHHH-TSHHHHHHHHHHT
T ss_pred HHHHHHHHHh-hCHHHHHHHHHHH
Confidence 8988888899 9999998887643
No 267
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.64 E-value=0.00012 Score=76.64 Aligned_cols=91 Identities=13% Similarity=-0.000 Sum_probs=68.3
Q ss_pred eEEeccCcChHHHHHhcccccEEecCC--C------CCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCcccc
Q psy17691 573 RILFSNVAAKEEHVRRGQLADVCLDTP--L------CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA 644 (673)
Q Consensus 573 rv~~~~~~~~~~~~~~~~~~Di~Ld~~--p------~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia 644 (673)
+|.|+|+.|+++....+..+|+.|=.. . ++-+..+.|+|++|+|||+........ ++..-|. .+++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~-----~v~~~~~-G~~~ 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQE-----LIENNGL-GWIV 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTH-----HHHHHTC-EEEE
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHH-----HHHhCCe-EEEe
Confidence 899999999999999997777776541 1 345788999999999999876544433 4444444 4667
Q ss_pred CCHHHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 645 RTHKEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 645 ~~~~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
++.++.++....+ +++.+++|+...
T Consensus 289 ~~~~e~~~~i~~l--~~~~~~~m~~na 313 (339)
T 3rhz_A 289 KDVEEAIMKVKNV--NEDEYIELVKNV 313 (339)
T ss_dssp SSHHHHHHHHHHC--CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh--CHHHHHHHHHHH
Confidence 7889998888876 466788877654
No 268
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.57 E-value=0.00014 Score=77.34 Aligned_cols=91 Identities=18% Similarity=0.124 Sum_probs=61.2
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEY 650 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~y 650 (673)
++++.+.++.|+.+.+. .+|+|+ ..+|.+|++||+++|||+|+++-.. -...-+..+...|..-.+ .+.+.-
T Consensus 287 ~~~v~~~~~~p~~~lL~---~~~~~v---~h~G~~s~~Eal~~GvP~v~~P~~~-dQ~~na~~v~~~G~g~~l-~~~~~~ 358 (400)
T 4amg_A 287 PANVRVVEWIPLGALLE---TCDAII---HHGGSGTLLTALAAGVPQCVIPHGS-YQDTNRDVLTGLGIGFDA-EAGSLG 358 (400)
T ss_dssp CTTEEEECCCCHHHHHT---TCSEEE---ECCCHHHHHHHHHHTCCEEECCC----CHHHHHHHHHHTSEEEC-CTTTCS
T ss_pred CCCEEEEeecCHHHHhh---hhhhee---ccCCccHHHHHHHhCCCEEEecCcc-cHHHHHHHHHHCCCEEEc-CCCCch
Confidence 57899999999877664 589987 3788899999999999999986432 122334456666764333 222222
Q ss_pred HHHHHHhcCCHHHHHHHHh
Q psy17691 651 QDIAIRLGTDRDYCEKALL 669 (673)
Q Consensus 651 v~~a~~la~d~~~~~~~~~ 669 (673)
.+...++.+|++.|++.+.
T Consensus 359 ~~al~~lL~d~~~r~~a~~ 377 (400)
T 4amg_A 359 AEQCRRLLDDAGLREAALR 377 (400)
T ss_dssp HHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHH
Confidence 3455567789888776654
No 269
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.57 E-value=0.0008 Score=60.24 Aligned_cols=123 Identities=13% Similarity=0.072 Sum_probs=93.2
Q ss_pred hCCCCHHHHHHHHHHHHHcCCH------HHHHHHHHHHHhhCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 145 LCPTHADSLNNLANIKREQGYI------EEATRLYLKALEVFPEF--------AAAHSNLASVLQQQGKLTDALLHYKEA 210 (673)
Q Consensus 145 ~~p~~~~a~~~Lg~~~~~~g~~------~eA~~~~~~al~~~p~~--------~~~~~~la~~~~~~g~~~eA~~~~~~a 210 (673)
..|++++.|........+.|+. ++-++.|++|+..-|-. ...|...|.. ...++.++|.+.|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 4677788888777777777777 77778888887765542 4566677755 5568999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 211 IRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 211 l~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
++++...+.+|...|..-.++|+..+|.+.+.+|+.+.|...+.. ..+..-.+.|+..
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l-e~a~~nl~~~~~~ 144 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML-EIALRNLNLQKKQ 144 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH-HHHHHHHHTTCSC
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH-HHHHHhhhcCCCe
Confidence 888888888999999999999999999999999999988765543 3344445566654
No 270
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.49 E-value=0.0011 Score=70.88 Aligned_cols=93 Identities=16% Similarity=0.099 Sum_probs=69.2
Q ss_pred CCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcCCCccccC---CH
Q psy17691 571 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---TH 647 (673)
Q Consensus 571 ~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~---~~ 647 (673)
+++|.+.+..|+.+.+ ..+|+++ ..+|..|+.||+++|||+|.++-. .-....+..+...|..-.+.. |.
T Consensus 267 ~~~v~~~~~~~~~~ll---~~~d~~v---~~gG~~t~~Eal~~GvP~v~~p~~-~dQ~~na~~~~~~G~g~~l~~~~~~~ 339 (404)
T 3h4t_A 267 GDDCLVVGEVNHQVLF---GRVAAVV---HHGGAGTTTAVTRAGAPQVVVPQK-ADQPYYAGRVADLGVGVAHDGPTPTV 339 (404)
T ss_dssp CTTEEEESSCCHHHHG---GGSSEEE---ECCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHHHTSEEECSSSSCCH
T ss_pred CCCEEEecCCCHHHHH---hhCcEEE---ECCcHHHHHHHHHcCCCEEEcCCc-ccHHHHHHHHHHCCCEeccCcCCCCH
Confidence 4789999999876655 4699998 356778999999999999998642 122334455677777655432 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 648 KEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 648 ~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
++..+...++.+ ++.+++++.-.
T Consensus 340 ~~l~~ai~~ll~-~~~~~~~~~~~ 362 (404)
T 3h4t_A 340 ESLSAALATALT-PGIRARAAAVA 362 (404)
T ss_dssp HHHHHHHHHHTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHH
Confidence 899888888888 88888877644
No 271
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.46 E-value=0.0005 Score=74.94 Aligned_cols=141 Identities=13% Similarity=0.154 Sum_probs=90.9
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccC
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKF 552 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (673)
...++|.||+.......+.+....+-++..+.-.+|..+.... ..+
T Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~------------------------~~l---------- 315 (456)
T 2c1x_A 270 PTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKAR------------------------VHL---------- 315 (456)
T ss_dssp TTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGG------------------------GGS----------
T ss_pred CcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcch------------------------hhC----------
Confidence 4568888888777666666666666666555445565541000 000
Q ss_pred ChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHH
Q psy17691 553 PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAAS 632 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~ 632 (673)
+ +.+.++ + .+++.+.++.|+.+.|. +..+|+|+. .+|.+|++||+++|||+|+++-. .-...-+.
T Consensus 316 ~----~~~~~~-----~-~~~~~v~~w~pq~~vL~-h~~~~~fvt---h~G~~S~~Eal~~GvP~i~~P~~-~dQ~~Na~ 380 (456)
T 2c1x_A 316 P----EGFLEK-----T-RGYGMVVPWAPQAEVLA-HEAVGAFVT---HCGWNSLWESVAGGVPLICRPFF-GDQRLNGR 380 (456)
T ss_dssp C----TTHHHH-----H-TTTEEEESCCCHHHHHT-STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCS-TTHHHHHH
T ss_pred C----HHHHhh-----c-CCceEEecCCCHHHHhc-CCcCCEEEe---cCCcchHHHHHHhCceEEecCCh-hhHHHHHH
Confidence 0 111111 1 36788889998765443 336888886 89999999999999999999753 22334556
Q ss_pred HHHhc-CCCcccc---CCHHHHHHHHHHhcCCHH
Q psy17691 633 QLATL-GCPELIA---RTHKEYQDIAIRLGTDRD 662 (673)
Q Consensus 633 ~l~~~-gl~~~ia---~~~~~yv~~a~~la~d~~ 662 (673)
.+... |..-.+. -+.++..+...++..|++
T Consensus 381 ~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~ 414 (456)
T 2c1x_A 381 MVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK 414 (456)
T ss_dssp HHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH
T ss_pred HHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc
Confidence 66666 7765443 267888887778888874
No 272
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.43 E-value=0.00086 Score=72.81 Aligned_cols=141 Identities=12% Similarity=0.155 Sum_probs=92.1
Q ss_pred CCCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 472 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 472 ~~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
+...++|.||+.....+++.+...+.-|+..+.-.+|..+..
T Consensus 271 ~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~-------------------------------------- 312 (454)
T 3hbf_A 271 ENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD-------------------------------------- 312 (454)
T ss_dssp CTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC--------------------------------------
T ss_pred CCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc--------------------------------------
Confidence 345788899988888888888888888877766666765510
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
. .+.+-+.|.+. + ++|+.+.++.|+.+.|. +..+++|+. ++|.+|++||++.|||+|+++--. -...-+
T Consensus 313 --~--~~~lp~~~~~~-~-~~~~~vv~w~Pq~~vL~-h~~v~~fvt---H~G~~S~~Eal~~GvP~i~~P~~~-DQ~~Na 381 (454)
T 3hbf_A 313 --P--KEKLPKGFLER-T-KTKGKIVAWAPQVEILK-HSSVGVFLT---HSGWNSVLECIVGGVPMISRPFFG-DQGLNT 381 (454)
T ss_dssp --H--HHHSCTTHHHH-T-TTTEEEESSCCHHHHHH-STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCST-THHHHH
T ss_pred --c--hhcCCHhHHhh-c-CCceEEEeeCCHHHHHh-hcCcCeEEe---cCCcchHHHHHHcCCCEecCcccc-cHHHHH
Confidence 0 00010111111 2 46888889999876665 222336664 789999999999999999997521 133344
Q ss_pred HHHHh-cCCCcccc---CCHHHHHHHHHHhcCCH
Q psy17691 632 SQLAT-LGCPELIA---RTHKEYQDIAIRLGTDR 661 (673)
Q Consensus 632 ~~l~~-~gl~~~ia---~~~~~yv~~a~~la~d~ 661 (673)
..+.. +|..-.+. -+.++..+...++..|+
T Consensus 382 ~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 382 ILTESVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp HHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred HHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 55665 47654442 26788887777888875
No 273
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.42 E-value=0.0016 Score=71.41 Aligned_cols=144 Identities=15% Similarity=0.223 Sum_probs=91.4
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCc-CCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAV-GEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
...++|.||+.....+...+...++-|...+.-.+|..+.... ++
T Consensus 294 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~---------------------------------- 339 (482)
T 2pq6_A 294 PGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGG---------------------------------- 339 (482)
T ss_dssp TTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTT----------------------------------
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccc----------------------------------
Confidence 4467888888776666666666677777766556665541100 00
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
...-.+.+.+. + ++++.+.++.|+.+.|+ +..+|+|+. ++|.+|++||+++|||+|+++-. .-...-+
T Consensus 340 -~~~l~~~~~~~-----~-~~~~~v~~~~pq~~~L~-h~~~~~~vt---h~G~~s~~Eal~~GvP~i~~P~~-~dQ~~na 407 (482)
T 2pq6_A 340 -SVIFSSEFTNE-----I-ADRGLIASWCPQDKVLN-HPSIGGFLT---HCGWNSTTESICAGVPMLCWPFF-ADQPTDC 407 (482)
T ss_dssp -GGGSCHHHHHH-----H-TTTEEEESCCCHHHHHT-STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCS-TTHHHHH
T ss_pred -cccCcHhHHHh-----c-CCCEEEEeecCHHHHhc-CCCCCEEEe---cCCcchHHHHHHcCCCEEecCcc-cchHHHH
Confidence 00000112121 2 46888889999776443 344666775 89999999999999999999764 2233445
Q ss_pred HHHH-hcCCCcccc--CCHHHHHHHHHHhcCCHH
Q psy17691 632 SQLA-TLGCPELIA--RTHKEYQDIAIRLGTDRD 662 (673)
Q Consensus 632 ~~l~-~~gl~~~ia--~~~~~yv~~a~~la~d~~ 662 (673)
..+. ..|..-.+. -+.++..+...++..|++
T Consensus 408 ~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~ 441 (482)
T 2pq6_A 408 RFICNEWEIGMEIDTNVKREELAKLINEVIAGDK 441 (482)
T ss_dssp HHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHH
T ss_pred HHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCc
Confidence 5554 677765443 378888888888888885
No 274
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.33 E-value=0.01 Score=65.30 Aligned_cols=149 Identities=12% Similarity=-0.019 Sum_probs=118.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHhhC-CCCHHHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLC-PTHADSLNNLANIKREQG---------YIEEATRLYLKALEVF-PEFAAAHSN 189 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~Lg~~~~~~g---------~~~eA~~~~~~al~~~-p~~~~~~~~ 189 (673)
..+..+.+.|+.++|++.|++..+.. .-+...|..+-.++...+ +.++|.+.|++..+.. .-+..+|..
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~ 110 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTN 110 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 34556667899999999999998863 235667777766666544 3788999999887653 236778999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCC
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIRIQ-PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQIN-PGFADAHSNLASIHKDSGK 267 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~-p~~~~a~~~La~~~~~~g~ 267 (673)
+-..|.+.|++++|.+.|++..+.. ..+...|+.+-..|.+.|+.++|.+.|++..+.. .-+...|..|..++.+.|+
T Consensus 111 lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~ 190 (501)
T 4g26_A 111 GARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKN 190 (501)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCC
Confidence 9999999999999999999987763 2357889999999999999999999999988753 2246788889999999999
Q ss_pred Cc
Q psy17691 268 RG 269 (673)
Q Consensus 268 ~~ 269 (673)
.+
T Consensus 191 ~d 192 (501)
T 4g26_A 191 AD 192 (501)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 275
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.31 E-value=0.0022 Score=70.05 Aligned_cols=149 Identities=16% Similarity=0.203 Sum_probs=93.7
Q ss_pred CCcEEEecCCccc-ccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 473 EDAIVYCNFNQLY-KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 473 ~~~~~~~~~~~~~-K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
...++|.||+... .++.+.+...++-|+..+.-.+|..+.. +..
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~---~~~-------------------------------- 319 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE---KKV-------------------------------- 319 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC---GGG--------------------------------
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC---ccc--------------------------------
Confidence 4568888888777 7777777777777776655555655410 000
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
.+ +.+.+.... .+|+.+.++.|+.+.|. +..+|+|+. ++|.+|++||+++|||+|+++-..- ...-+
T Consensus 320 l~----~~~~~~~~~----~~~~~v~~w~pq~~vL~-h~~~~~fvt---h~G~~s~~Eal~~GvP~i~~P~~~d-Q~~Na 386 (463)
T 2acv_A 320 FP----EGFLEWMEL----EGKGMICGWAPQVEVLA-HKAIGGFVS---HCGWNSILESMWFGVPILTWPIYAE-QQLNA 386 (463)
T ss_dssp SC----TTHHHHHHH----HCSEEEESSCCHHHHHH-STTEEEEEE---CCCHHHHHHHHHTTCCEEECCCSTT-HHHHH
T ss_pred CC----hhHHHhhcc----CCCEEEEccCCHHHHhC-CCccCeEEe---cCCchhHHHHHHcCCCeeeccchhh-hHHHH
Confidence 01 112222110 25777888998766542 346888875 8999999999999999999976322 23344
Q ss_pred HH-HHhcCCCccc---------cCCHHHHHHHHHHhcC-CHHHHHHHHh
Q psy17691 632 SQ-LATLGCPELI---------ARTHKEYQDIAIRLGT-DRDYCEKALL 669 (673)
Q Consensus 632 ~~-l~~~gl~~~i---------a~~~~~yv~~a~~la~-d~~~~~~~~~ 669 (673)
.. +...|..-.+ .-+.++..+...++.+ +++.+++.++
T Consensus 387 ~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~ 435 (463)
T 2acv_A 387 FRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQE 435 (463)
T ss_dssp HHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHH
T ss_pred HHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHH
Confidence 44 4677776555 1267777777667776 4566665543
No 276
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.30 E-value=0.0012 Score=60.47 Aligned_cols=131 Identities=11% Similarity=0.010 Sum_probs=83.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHH
Q psy17691 119 TFSYIISVLLLIQVSEAEECYNTALRLCPTH---------ADSLNNLANIKREQGYIEEATRLYLKALEVFP---EFAAA 186 (673)
Q Consensus 119 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p---~~~~~ 186 (673)
.+..+..++..+.|+.|+-....++....++ ..++..+|.+++.+++|..|...|+++|+... .....
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3455677788999999999998877764332 34788899999999999999999999987632 22221
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 187 HSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIH 262 (673)
Q Consensus 187 ~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~ 262 (673)
...++. ...+.. ... .+.+.++.+.++.||.++|++++|+..++.. -..-..+.....||.+|
T Consensus 103 ~~~~~~----~ss~p~-------s~~-~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 103 RPSTGN----SASTPQ-------SQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -------------------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred cccccc----cCCCcc-------ccc-ccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 111110 000000 111 1345678889999999999999999887652 12224566666677665
No 277
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.24 E-value=0.0045 Score=55.40 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=90.1
Q ss_pred hcCCCChhHH-HHHHHHHHcCCH------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17691 111 ALSPDDGTTF-SYIISVLLLIQV------SEAEECYNTALRLCPTH--------ADSLNNLANIKREQGYIEEATRLYLK 175 (673)
Q Consensus 111 ~l~p~~~~~~-~~~~~~~~~g~~------~~A~~~~~~al~~~p~~--------~~a~~~Lg~~~~~~g~~~eA~~~~~~ 175 (673)
...|++.+.| .++..+-..|+. ++-++.|++|+..-|.. ...|...|.. ...++.++|.+.|+.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQM 85 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 4578888887 445555557888 88899999999987653 4466667755 567999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy17691 176 ALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAY 221 (673)
Q Consensus 176 al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 221 (673)
++.++...+.+|...|..-.++|+...|.+.+.+++...|...+.+
T Consensus 86 a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 86 ARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 9999999999999999999999999999999999999999866543
No 278
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.22 E-value=0.0017 Score=59.36 Aligned_cols=96 Identities=13% Similarity=-0.006 Sum_probs=56.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy17691 120 FSYIISVLLLIQVSEAEECYNTALRLCP---THADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQ 196 (673)
Q Consensus 120 ~~~~~~~~~~g~~~~A~~~~~~al~~~p---~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~ 196 (673)
...+..++..++|.+|...|+++++... ........++. ... +..... .+.+.++.+.++.||.+
T Consensus 67 ~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~----~ss-------~p~s~~-~~~e~Elkykia~C~~~ 134 (167)
T 3ffl_A 67 VYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGN----SAS-------TPQSQC-LPSEIEVKYKLAECYTV 134 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------------------------------C-CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccc----cCC-------Cccccc-ccchHHHHHHHHHHHHH
Confidence 3566778889999999999999988632 22211111110 000 000111 13456788889999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 197 QGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 197 ~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
++++++|+..++..- ..-..+.....||.+|
T Consensus 135 l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 135 LKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp TTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 999999988876532 1223466777777665
No 279
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.99 E-value=0.041 Score=60.48 Aligned_cols=131 Identities=6% Similarity=-0.026 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 131 QVSEAEECYNTALRLC-PTHADSLNNLANIKREQGYIEEATRLYLKALEVF-PEFAAAHSNLASVLQQQGKLTDALLHYK 208 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~-p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~eA~~~~~ 208 (673)
..++|.+.|++..+.. .-+..+|..+-..|.+.|++++|.+.|++..+.. .-+...|+.+-..|.+.|+.++|.+.|+
T Consensus 85 ~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 85 GLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH
Confidence 4789999999988763 2367889999999999999999999999988763 3367889999999999999999999999
Q ss_pred HHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Q psy17691 209 EAIRIQ-PSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI--NPGFADAHSNLASIH 262 (673)
Q Consensus 209 ~al~~~-p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l--~p~~~~a~~~La~~~ 262 (673)
+..+.. ..+...|..+-.+|.+.|+.++|.+.+++.-+. .|+ ...+..+-..+
T Consensus 165 ~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps-~~T~~~l~~~F 220 (501)
T 4g26_A 165 HMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS-KSTFDMIEEWF 220 (501)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC-HHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC-HHHHHHHHHHH
Confidence 988763 225788999999999999999999999998764 444 34444443333
No 280
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.96 E-value=0.021 Score=50.67 Aligned_cols=75 Identities=7% Similarity=-0.071 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 183 FAAAHSNLASVLQQQGKL---TDALLHYKEAIRIQPS-FADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSN 257 (673)
Q Consensus 183 ~~~~~~~la~~~~~~g~~---~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~ 257 (673)
...+.+++|+++....+. .+++..++..++.+|. ..++++.||..+.++|+|++|..+.+..|+.+|++.++..-
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 455555555555554432 3455566666655553 34566666666666666666666666666666666555443
No 281
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.93 E-value=0.0063 Score=66.65 Aligned_cols=164 Identities=15% Similarity=0.189 Sum_probs=92.3
Q ss_pred CCcEEEecCCcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccC
Q psy17691 473 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKF 552 (673)
Q Consensus 473 ~~~~~~~~~~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (673)
...++|.||+.....+.+.+...++-|+..+.-.+|.++.+...+. . ..+ ... ....+-..+|
T Consensus 267 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~--~-~~~----~~~-~~~~~~~~lp--------- 329 (480)
T 2vch_A 267 LGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN--S-SYF----DSH-SQTDPLTFLP--------- 329 (480)
T ss_dssp TTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT--T-TTT----CC---CSCGGGGSC---------
T ss_pred CCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc--c-ccc----ccc-cccchhhhcC---------
Confidence 4578888888887778888887777787777666676552110000 0 000 000 0000000011
Q ss_pred ChhhhhhHHHHHHHcCCCCCe-EEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHH
Q psy17691 553 PAVGEANIQATAQALGLDQHR-ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 631 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~r-v~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~ 631 (673)
+++.++ + .+| +++.++.|+.+.|+. ..+..|+. ++|.+|++||+++|||+|+++-- .-...-+
T Consensus 330 -----~~~~~~-----~-~~~g~~v~~w~Pq~~vL~h-~~v~~fvt---HgG~~S~~Eal~~GvP~i~~P~~-~DQ~~na 393 (480)
T 2vch_A 330 -----PGFLER-----T-KKRGFVIPFWAPQAQVLAH-PSTGGFLT---HCGWNSTLESVVSGIPLIAWPLY-AEQKMNA 393 (480)
T ss_dssp -----TTHHHH-----T-TTTEEEEESCCCHHHHHHS-TTEEEEEE---CCCHHHHHHHHHHTCCEEECCCS-TTHHHHH
T ss_pred -----HHHHHH-----h-CCCeEEEeCccCHHHHhCC-CCcCeEEe---cccchhHHHHHHcCCCEEecccc-ccchHHH
Confidence 122222 1 233 455568887766642 22335654 89999999999999999999863 2233334
Q ss_pred HHH-HhcCCCcccc------CCHHHHHHHHHHhcC---CHHHHHHHHh
Q psy17691 632 SQL-ATLGCPELIA------RTHKEYQDIAIRLGT---DRDYCEKALL 669 (673)
Q Consensus 632 ~~l-~~~gl~~~ia------~~~~~yv~~a~~la~---d~~~~~~~~~ 669 (673)
..+ ...|..-.+. -|.++..+...++.. |++.|++.++
T Consensus 394 ~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~ 441 (480)
T 2vch_A 394 VLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKE 441 (480)
T ss_dssp HHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHH
T ss_pred HHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHH
Confidence 444 5667654332 267777777777777 5566665543
No 282
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.85 E-value=0.028 Score=49.96 Aligned_cols=81 Identities=7% Similarity=-0.130 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy17691 147 PTHADSLNNLANIKREQGYI---EEATRLYLKALEVFPE-FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYS 222 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~---~eA~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 222 (673)
.-..++.+++|+++....+. .+++..++..++..|. .-+.++.||..+++.|+|++|.++.+..|+..|++..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45688889999998887654 4688889998888884 5788899999999999999999999999999999887765
Q ss_pred HHHHH
Q psy17691 223 NMGNT 227 (673)
Q Consensus 223 ~lg~~ 227 (673)
....+
T Consensus 116 Lk~~I 120 (144)
T 1y8m_A 116 LKSMV 120 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 283
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.82 E-value=0.012 Score=51.56 Aligned_cols=77 Identities=8% Similarity=-0.131 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy17691 149 HADSLNNLANIKREQGYI---EEATRLYLKALEVFPE-FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNM 224 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~---~eA~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 224 (673)
.+.+.+++|+++....+. .+++..++..++.+|. ..+.++.||..+++.|+|++|.++.+..++..|++..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 355666666666655433 3456666666655553 355566666666666666666666666666666665554443
Q ss_pred H
Q psy17691 225 G 225 (673)
Q Consensus 225 g 225 (673)
.
T Consensus 119 ~ 119 (134)
T 3o48_A 119 S 119 (134)
T ss_dssp H
T ss_pred H
Confidence 3
No 284
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.52 E-value=0.023 Score=49.83 Aligned_cols=74 Identities=7% Similarity=-0.063 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy17691 184 AAAHSNLASVLQQQGKL---TDALLHYKEAIRIQPS-FADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSN 257 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~---~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~ 257 (673)
..+.+++|+++.+..+. .+++..++..++.+|. ..+.++.+|..+.++|+|++|..+.+..|+..|++..+..-
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 45555555555555432 3455555555555552 34555666666666666666666666666666666555433
No 285
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=96.43 E-value=0.0047 Score=69.16 Aligned_cols=70 Identities=11% Similarity=0.023 Sum_probs=53.1
Q ss_pred hhhhHHHHHHHcCCCC---Ce--EEecc-CcChH------HHHHhcccccEEecC-CCCCCcchhhhhhhcCCceeecCC
Q psy17691 556 GEANIQATAQALGLDQ---HR--ILFSN-VAAKE------EHVRRGQLADVCLDT-PLCNGHTTSMDVLWTGTPVVTLPG 622 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~---~r--v~~~~-~~~~~------~~~~~~~~~Di~Ld~-~p~~g~~t~~eal~~GvPvvt~~g 622 (673)
..+.+...+++.|+.- +| |+|.| .++.. ++...|+.||+|+-| +-++-|.|.+|||++|+||||-.-
T Consensus 471 ~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 471 ANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp GGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 3466777888888752 34 67776 55544 578888999999765 567889999999999999999665
Q ss_pred Ccc
Q psy17691 623 ETL 625 (673)
Q Consensus 623 ~~~ 625 (673)
..+
T Consensus 551 gG~ 553 (725)
T 3nb0_A 551 SGF 553 (725)
T ss_dssp BHH
T ss_pred CCh
Confidence 443
No 286
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.076 Score=60.71 Aligned_cols=115 Identities=12% Similarity=0.040 Sum_probs=84.8
Q ss_pred cCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---HcCCHHHHHHHHHHHHhh--------CCCC----------HHH
Q psy17691 129 LIQ-VSEAEECYNTALRLCPTHADSLNNLANIKR---EQGYIEEATRLYLKALEV--------FPEF----------AAA 186 (673)
Q Consensus 129 ~g~-~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~---~~g~~~eA~~~~~~al~~--------~p~~----------~~~ 186 (673)
.++ ++.|+..+++..+.+|.... ++..+.+.. ...+--+|+..+.++++. .+.+ ...
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 455 68899999999999987643 222232222 123455677777777642 2333 223
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 187 HSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRA 244 (673)
Q Consensus 187 ~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~A 244 (673)
+..-+..+..+|+++-|+++.++|+...|.+...|..|+.+|..+|+++.|+-.+..+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4444677788999999999999999999999999999999999999999999776553
No 287
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.75 E-value=1.1 Score=40.87 Aligned_cols=29 Identities=14% Similarity=0.187 Sum_probs=20.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 222 SNMGNTLKEMQDIQGALQCYSRAIQINPG 250 (673)
Q Consensus 222 ~~lg~~~~~~g~~~eA~~~~~~Al~l~p~ 250 (673)
.+.+.-|..+|-.++...+|...-+.+|.
T Consensus 212 a~aa~~yf~lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 212 SNAARRYFNLGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhcccchhHHHHHHHHHhcCCC
Confidence 34556667777777777777777777764
No 288
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.36 Score=44.63 Aligned_cols=103 Identities=11% Similarity=0.009 Sum_probs=71.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q psy17691 123 IISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTD 202 (673)
Q Consensus 123 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~e 202 (673)
....+..|+++.|.+..++. ++...|..||.....+|+++-|+.+|+++-. +..+..+|...|+.+.
T Consensus 12 F~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~ 78 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNK 78 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHH
T ss_pred HHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHH
Confidence 34556788999998887665 6788899999999999999999999988632 2345555666777665
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17691 203 ALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSR 243 (673)
Q Consensus 203 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~ 243 (673)
-.+..+.+..... ++....++..+|+++++++.|.+
T Consensus 79 L~kla~iA~~~g~-----~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 79 LSKMQNIAQTRED-----FGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHHHTTC-----HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCcc-----HHHHHHHHHHcCCHHHHHHHHHH
Confidence 5555444443322 12333456677888888877755
No 289
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.17 E-value=0.083 Score=57.64 Aligned_cols=81 Identities=19% Similarity=0.277 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKD 264 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~ 264 (673)
..+..||.+......++.|..+|.+|+.+.|++...++.||.+....|+.-+|+-+|.+++.....++.+..||..++.+
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 36678899999999999999999999999999999999999999999999999999999999888899999999998876
Q ss_pred c
Q psy17691 265 S 265 (673)
Q Consensus 265 ~ 265 (673)
.
T Consensus 233 ~ 233 (497)
T 1ya0_A 233 A 233 (497)
T ss_dssp H
T ss_pred H
Confidence 4
No 290
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.90 E-value=0.41 Score=47.27 Aligned_cols=122 Identities=16% Similarity=0.116 Sum_probs=85.7
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q psy17691 124 ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDA 203 (673)
Q Consensus 124 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA 203 (673)
..+++.|+.++|++..+..++.+|.+......|..++.-.|+++.|.+-++.+.+++|+....-..+-.+. .|
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI-------~a 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLV-------KA 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH-------HH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHH-------HH
Confidence 34566789999999999999999999999999999999999999999999999999998754322221111 11
Q ss_pred HHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 204 LLHYKEAIRI--------QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 204 ~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
...=++.+.- .|........-+......|+.++|.+.-.+|++..|...
T Consensus 78 E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 78 AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 1111112211 111122333445566677999999999999999887644
No 291
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.77 E-value=0.4 Score=50.62 Aligned_cols=106 Identities=14% Similarity=0.084 Sum_probs=73.9
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEA-TRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLH 206 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA-~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~ 206 (673)
..|+.++|...+++|+.+.....-. ... ...+-.+ ...+++.. ..+...++..+...|++++|+..
T Consensus 127 ~~~~~~~a~~~l~~Al~L~rG~~L~--~~~-----~~~w~~~~r~~l~~~~------~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 127 AAGRFEQASRHLSAALREWRGPVLD--DLR-----DFQFVEPFATALVEDK------VLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HTTCHHHHHHHHHHHHTTCCSSTTG--GGT-----TSTTHHHHHHHHHHHH------HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhcCCCCCC--CCC-----chhHHHHHHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHHH
Confidence 3578888888888888875332100 000 0111111 11111111 12455678888899999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 207 YKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 207 ~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
+++++..+|-+-.+|..+-.+|...|+..+|++.|+++-+
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988754
No 292
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.64 E-value=0.13 Score=56.00 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy17691 152 SLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKE 230 (673)
Q Consensus 152 a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 230 (673)
.+..||.+......++.|..+|.+|..+.|++...++.||.+....|+.-+|+-+|.+++......+.+..|+...+.+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 5667888888888899999999999999999999999999999999999999999999988877788888888887765
No 293
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.28 E-value=0.33 Score=55.96 Aligned_cols=44 Identities=11% Similarity=0.033 Sum_probs=24.2
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKA 176 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~a 176 (673)
..|++++|.+..+ ..++...|..+|..+.+.++++.|+++|.++
T Consensus 664 ~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 664 KVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3445555544432 2244556666666666666666666666654
No 294
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.09 E-value=0.6 Score=49.26 Aligned_cols=63 Identities=13% Similarity=0.014 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIR 212 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~ 212 (673)
..+...++..+...|++++|+..+++++..+|-+..+|..+-.++...|+..+|++.|+++-+
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346677888999999999999999999999999999999999999999999999999988754
No 295
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=93.97 E-value=0.08 Score=54.78 Aligned_cols=52 Identities=12% Similarity=0.053 Sum_probs=41.1
Q ss_pred EEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhh
Q psy17691 574 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 629 (673)
Q Consensus 574 v~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~ 629 (673)
+.+.|..+..+..+.+..+|+++-.= +|+++. |.++|+|+|++-|.+...|.
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D--sg~~Hl--Aaa~g~P~v~lfg~t~~~~~ 295 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND--SGLMHV--AAALNRPLVALYGPSSPDFT 295 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES--SHHHHH--HHHTTCCEEEEESSSCTTSS
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC--CHHHHH--HHHcCCCEEEEECCCCcccc
Confidence 56788999999999999999997532 444444 88899999999988765544
No 296
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=93.87 E-value=0.21 Score=50.23 Aligned_cols=76 Identities=11% Similarity=-0.049 Sum_probs=51.9
Q ss_pred hhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHh
Q psy17691 557 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLAT 636 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~ 636 (673)
.+.+++..... .++.+.+..+ +...+|..+|+++.+ ||+|+.|++++|+|.|..+-... .+.-+..|..
T Consensus 197 ~~~l~~~~~~~----~~v~v~~~~~--~m~~~m~~aDlvI~~----gG~T~~E~~~~g~P~i~ip~~~~-Q~~nA~~l~~ 265 (282)
T 3hbm_A 197 LKKLQKFAKLH----NNIRLFIDHE--NIAKLMNESNKLIIS----ASSLVNEALLLKANFKAICYVKN-QESTATWLAK 265 (282)
T ss_dssp HHHHHHHHHTC----SSEEEEESCS--CHHHHHHTEEEEEEE----SSHHHHHHHHTTCCEEEECCSGG-GHHHHHHHHH
T ss_pred HHHHHHHHhhC----CCEEEEeCHH--HHHHHHHHCCEEEEC----CcHHHHHHHHcCCCEEEEeCCCC-HHHHHHHHHH
Confidence 35565554432 3677777653 455566689999982 56899999999999988764432 3456677777
Q ss_pred cCCCccc
Q psy17691 637 LGCPELI 643 (673)
Q Consensus 637 ~gl~~~i 643 (673)
.|...++
T Consensus 266 ~G~~~~~ 272 (282)
T 3hbm_A 266 KGYEVEY 272 (282)
T ss_dssp TTCEEEC
T ss_pred CCCEEEc
Confidence 7775543
No 297
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.84 E-value=0.85 Score=41.46 Aligned_cols=103 Identities=11% Similarity=0.040 Sum_probs=69.6
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------
Q psy17691 147 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI------------- 213 (673)
Q Consensus 147 p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~------------- 213 (673)
|..++....++.+++-.|++..++-.+.+ -+...+.+.-+.+|...++|..|+.+++..++-
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 44445556667777777777666554432 233555566667777777777777777777632
Q ss_pred ----CCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy17691 214 ----QPSFAD-AYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADA 254 (673)
Q Consensus 214 ----~p~~~~-~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a 254 (673)
+|.+.+ .+..+|.++.+.|+.+||+.+|.......|-...+
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred eeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 344444 56678999999999999999999999998875544
No 298
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.07 E-value=0.32 Score=55.55 Aligned_cols=106 Identities=15% Similarity=0.054 Sum_probs=79.4
Q ss_pred cCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHHh--------CCCC----------HHH
Q psy17691 163 QGY-IEEATRLYLKALEVFPEFAAAHSNLASVLQ--Q-QGKLTDALLHYKEAIRI--------QPSF----------ADA 220 (673)
Q Consensus 163 ~g~-~~eA~~~~~~al~~~p~~~~~~~~la~~~~--~-~g~~~eA~~~~~~al~~--------~p~~----------~~~ 220 (673)
.++ ++.|+..+++..+.+|.....+ ..+.+.. . ..+--+|+....++++. .+.+ ...
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~~~-~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDIYY-KTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 445 6889999999999999765433 2222221 1 22345677777777642 2222 235
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 221 YSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 221 ~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
+..-+..+...|+++-|+++.++|+...|.....|+.|+.+|..+|+++
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e 388 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYE 388 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHH
Confidence 5556778889999999999999999999999999999999999999998
No 299
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.47 E-value=1.5 Score=50.23 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=50.1
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHHc
Q psy17691 160 KREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEA--------IRIQPSFADAYSNMGNTLKEM 231 (673)
Q Consensus 160 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~a--------l~~~p~~~~~~~~lg~~~~~~ 231 (673)
..+.|++++|.+..+ .-++...|..+|..+.+.++++.|+++|.++ +.....+.+.+..++......
T Consensus 662 ~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~ 736 (814)
T 3mkq_A 662 ALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETT 736 (814)
T ss_dssp HHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHc
Confidence 355677777666543 2356778888888888888888888888775 122244455555666666666
Q ss_pred CCHHHHHHHHHH
Q psy17691 232 QDIQGALQCYSR 243 (673)
Q Consensus 232 g~~~eA~~~~~~ 243 (673)
|+++.|..+|.+
T Consensus 737 ~~~~~A~~~~~~ 748 (814)
T 3mkq_A 737 GKFNLAFNAYWI 748 (814)
T ss_dssp TCHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 666666555443
No 300
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.31 E-value=1.6 Score=45.81 Aligned_cols=117 Identities=10% Similarity=0.006 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHhCCCC--H--H--HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--C----HHHHHHHHHHHHHcC
Q psy17691 131 QVSEAEECYNTALRLCPTH--A--D--SLNNLANIKREQGYIEEATRLYLKALEVFPE--F----AAAHSNLASVLQQQG 198 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~--~--~--a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~--~----~~~~~~la~~~~~~g 198 (673)
..+.-++.+.++++..-+. . . .-..+|.+|+..|+|.+|.+.+.+.++.-.. + .+++..-..+|..++
T Consensus 74 ~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~ 153 (394)
T 3txn_A 74 GTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALS 153 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Confidence 3344445555555432222 1 1 2347899999999999999999988875322 1 567778888999999
Q ss_pred CHHHHHHHHHHHHHhC---CCCH----HHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q psy17691 199 KLTDALLHYKEAIRIQ---PSFA----DAYSNMGNTLK-EMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 199 ~~~eA~~~~~~al~~~---p~~~----~~~~~lg~~~~-~~g~~~eA~~~~~~Al~l 247 (673)
++.++...|.++.... +.++ .....-|..+. ..++|.+|..+|-++++-
T Consensus 154 n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 154 NLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 9999999999987653 1223 34556788888 899999999999999854
No 301
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.13 E-value=0.72 Score=49.34 Aligned_cols=101 Identities=10% Similarity=-0.042 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCH----H
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEF---AAAHSNLASVLQQQGKLTDALLHYKEAIRIQ--PSFA----D 219 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~---~~~~~~la~~~~~~g~~~eA~~~~~~al~~~--p~~~----~ 219 (673)
...++..+|..|.+.|++++|.++|.++....... .+.+.....++...+++..+...++++-... ..++ .
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 45578899999999999999999999988764332 6788888888999999999999999986652 2222 2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINP 249 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p 249 (673)
.....|.++...++|.+|-.+|..++....
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 344567777888999999999988876543
No 302
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.08 E-value=2 Score=46.54 Aligned_cols=142 Identities=13% Similarity=0.006 Sum_probs=69.1
Q ss_pred HHHcCCHHHHHHHHHHHHH---h--------CCCCHHHHHHHHHHHHHcCCHHHHH----------HHHHHHHhh-----
Q psy17691 126 VLLLIQVSEAEECYNTALR---L--------CPTHADSLNNLANIKREQGYIEEAT----------RLYLKALEV----- 179 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~---~--------~p~~~~a~~~Lg~~~~~~g~~~eA~----------~~~~~al~~----- 179 (673)
++..+++++|.++-...+. + ++-.+.+|+.++.++...|+..+.. ..+..+++.
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 3457889998888776651 1 3334667888888888888776532 233333333
Q ss_pred CCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 180 FPE-FAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF-------ADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 180 ~p~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
++. ....++.+-..|...+.|++|..+..++. .|.. ...++.+|.++.-+++|.+|.+++..|++..|.+
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 222 25677888899999999999999999984 4432 3467788999999999999999999999988754
Q ss_pred H-------HHHHHHHHHHHHcCCCc
Q psy17691 252 A-------DAHSNLASIHKDSGKRG 269 (673)
Q Consensus 252 ~-------~a~~~La~~~~~~g~~~ 269 (673)
. .++..+..+-.-+|+..
T Consensus 304 ~~a~gfr~~a~K~lI~V~LLlG~iP 328 (523)
T 4b4t_S 304 SKSLGFLQQSNKLHCCIQLLMGDIP 328 (523)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhhhhHHHHHHHHHHhHHhhcCCCC
Confidence 2 23333444445578876
No 303
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.49 E-value=2.4 Score=51.36 Aligned_cols=141 Identities=13% Similarity=-0.013 Sum_probs=81.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---C--------------------
Q psy17691 124 ISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEV---F-------------------- 180 (673)
Q Consensus 124 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~---~-------------------- 180 (673)
..+...++++-+.+ .+...|.++...+.+|.++...|++++|..+|+++-.- +
T Consensus 820 ~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~ 895 (1139)
T 4fhn_B 820 EKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQ 895 (1139)
T ss_dssp HHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSC
T ss_pred HHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccccccc
Confidence 33445555554433 34556777777788888888888888888888776221 0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-H----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy17691 181 PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF-A----DAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAH 255 (673)
Q Consensus 181 p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~-~----~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~ 255 (673)
...+..|..+..++.+.+.++.+++..+.|++..+.+ . ..|.++=..+...|+|++|...+...= -.....+..
T Consensus 896 ~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p-d~~~r~~cL 974 (1139)
T 4fhn_B 896 NLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS-TTPLKKSCL 974 (1139)
T ss_dssp CSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH-HSSSCHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC-CHHHHHHHH
Confidence 1113345556666666677777777777777654322 2 145555556666677776666554321 112234455
Q ss_pred HHHHHHHHHcCCCc
Q psy17691 256 SNLASIHKDSGKRG 269 (673)
Q Consensus 256 ~~La~~~~~~g~~~ 269 (673)
..|...+.+.|+.+
T Consensus 975 r~LV~~lce~~~~~ 988 (1139)
T 4fhn_B 975 LDFVNQLTKQGKIN 988 (1139)
T ss_dssp HHHHHHHHHHCCHH
T ss_pred HHHHHHHHhCCChh
Confidence 55555555555543
No 304
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=90.42 E-value=2.9 Score=49.07 Aligned_cols=94 Identities=9% Similarity=-0.055 Sum_probs=40.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Q psy17691 153 LNNLANIKREQGYIEEATRLYLKALEV----FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ-PSFADAYSNMGNT 227 (673)
Q Consensus 153 ~~~Lg~~~~~~g~~~eA~~~~~~al~~----~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~-p~~~~~~~~lg~~ 227 (673)
++.+-..|.+.|+.++|.+.|++.-+. ..-+...|+.|-..|.+.|+.++|.+.|++..+.. .-+...|+.+-.+
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~g 209 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 444444444555555555544332211 12233444444444555555555555554444331 1123444444444
Q ss_pred HHHcCC-HHHHHHHHHHHHH
Q psy17691 228 LKEMQD-IQGALQCYSRAIQ 246 (673)
Q Consensus 228 ~~~~g~-~~eA~~~~~~Al~ 246 (673)
+.+.|+ .++|.+.|++..+
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHH
Confidence 444444 2344444444443
No 305
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.17 E-value=0.61 Score=48.36 Aligned_cols=54 Identities=13% Similarity=0.084 Sum_probs=42.8
Q ss_pred CeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhh
Q psy17691 572 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 629 (673)
Q Consensus 572 ~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~ 629 (673)
.-+.+.|..+-.+..+.+..+|+++-. -+|.+.. |.++|+|+|++-|.+...|.
T Consensus 242 ~~~~l~g~~sl~e~~ali~~a~~~i~~--DsG~~Hl--Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 242 KPIVATGKFQLGPLAAAMNRCNLLITN--DSGPMHV--GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp CCEECTTCCCHHHHHHHHHTCSEEEEE--SSHHHHH--HHTTTCCEEEECSSCCHHHH
T ss_pred ccEEeeCCCCHHHHHHHHHhCCEEEEC--CCCHHHH--HHhcCCCEEEEECCCCcccc
Confidence 346788999999999999999999763 2344444 88899999999998776554
No 306
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=90.09 E-value=0.77 Score=46.83 Aligned_cols=82 Identities=11% Similarity=0.001 Sum_probs=52.1
Q ss_pred EEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHh--c-CCCccc-cCCHHH
Q psy17691 574 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLAT--L-GCPELI-ARTHKE 649 (673)
Q Consensus 574 v~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~--~-gl~~~i-a~~~~~ 649 (673)
+.+.|..+-.+..+.+..||+++-.= +|.+. + |.++|+|+|++-|.+...|.+----.. + |-...+ .=++|+
T Consensus 236 ~~l~g~~sl~el~ali~~a~l~I~~D--SG~~H-l-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~ 311 (326)
T 2gt1_A 236 VEVLPKMSLEGVARVLAGAKFVVSVD--TGLSH-L-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANA 311 (326)
T ss_dssp EEECCCCCHHHHHHHHHTCSEEEEES--SHHHH-H-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHH
T ss_pred ccccCCCCHHHHHHHHHhCCEEEecC--CcHHH-H-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHH
Confidence 56789999999999999999997532 34444 4 666999999999987665542100000 0 100111 126777
Q ss_pred HHHHHHHhcC
Q psy17691 650 YQDIAIRLGT 659 (673)
Q Consensus 650 yv~~a~~la~ 659 (673)
-.+.+.++..
T Consensus 312 V~~~i~~~l~ 321 (326)
T 2gt1_A 312 VKQFIEENAE 321 (326)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHH
Confidence 7777766654
No 307
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=89.59 E-value=4.4 Score=45.31 Aligned_cols=118 Identities=8% Similarity=-0.102 Sum_probs=81.9
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q psy17691 128 LLIQVSEAEECYNTALRLCPTHAD----SLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDA 203 (673)
Q Consensus 128 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA 203 (673)
..++.+.|...+.+..+...-+.. .+..++.-+...+...++...+.+......+ ......++......|+++.|
T Consensus 226 ar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~r~Alr~~d~~~a 304 (618)
T 1qsa_A 226 ARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQS-TSLIERRVRMALGTGDRRGL 304 (618)
T ss_dssp HHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCC-HHHHHHHHHHHHHHTCHHHH
T ss_pred HhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCC-hHHHHHHHHHHHHCCCHHHH
Confidence 345889999999887654433332 2223333334445466788888887654443 33344444455677999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 204 LLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 204 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~ 246 (673)
...+++.-..........+.+|.++..+|+.++|..+|+++.+
T Consensus 305 ~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 305 NTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 9999775554445678899999999999999999999999875
No 308
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=89.15 E-value=1.6 Score=43.09 Aligned_cols=59 Identities=25% Similarity=0.241 Sum_probs=36.9
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 194 LQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFA 252 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~ 252 (673)
+.+.|+.++|++..+..++.+|.+......+-.++.-.|+++.|.+.++.+.+++|+..
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 34456666666666666666666666666666666666666666666666666666554
No 309
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.55 E-value=5.2 Score=42.80 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCH--
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFP--EF----AAAHSNLASVLQQQGKLTDALLHYKEAIR---IQPSFA-- 218 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p--~~----~~~~~~la~~~~~~g~~~eA~~~~~~al~---~~p~~~-- 218 (673)
......|+.+|...|++.+|...++....-.- .+ .+.+.....++...+++.+|...++++.. ..+..+
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 34567889999999999999999988764311 11 56778888999999999999999998742 233333
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 219 --DAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 219 --~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
..+...|.++...++|.+|-.+|..+++.
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 46677889999999999999999999865
No 310
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.94 E-value=4 Score=37.61 Aligned_cols=79 Identities=15% Similarity=0.069 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy17691 149 HADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTL 228 (673)
Q Consensus 149 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 228 (673)
+++..+.++ .+.|+++.|.+..++. ++...|..||.....+|+++-|..+|+++- + +..+..+|
T Consensus 7 D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~-----D---~~~L~~Ly 70 (177)
T 3mkq_B 7 DPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH-----S---FDKLSFLY 70 (177)
T ss_dssp CHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT-----C---HHHHHHHH
T ss_pred ChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC-----C---HHHHHHHH
Confidence 445555554 5689999999887765 678899999999999999999999998752 2 23444455
Q ss_pred HHcCCHHHHHHHHHH
Q psy17691 229 KEMQDIQGALQCYSR 243 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~ 243 (673)
.-.|+.++-...-+.
T Consensus 71 ~~tg~~e~L~kla~i 85 (177)
T 3mkq_B 71 LVTGDVNKLSKMQNI 85 (177)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHH
Confidence 555665544433333
No 311
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=85.37 E-value=0.5 Score=45.67 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=50.0
Q ss_pred eEEeccCcChHHHHHhcc-cccEEecCCCCCCcchhhhhhhcCCceeecCCCcc---hhhhHHHHHHhcCCCccccCCHH
Q psy17691 573 RILFSNVAAKEEHVRRGQ-LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL---ASRVAASQLATLGCPELIARTHK 648 (673)
Q Consensus 573 rv~~~~~~~~~~~~~~~~-~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~---~~r~~~~~l~~~gl~~~ia~~~~ 648 (673)
++...+..+ ++-..+. .||+++. .+|.+|++|++++|+|.|..+.+.. ....-+..|...|.--.+ +.+
T Consensus 115 ~v~v~~f~~--~m~~~l~~~AdlvIs---haGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~~~ 187 (224)
T 2jzc_A 115 KVIGFDFST--KMQSIIRDYSDLVIS---HAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--APT 187 (224)
T ss_dssp EEEECCSSS--SHHHHHHHHCSCEEE---SSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--CSC
T ss_pred eEEEeeccc--hHHHHHHhcCCEEEE---CCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--CHH
Confidence 455556543 4445566 7999885 6899999999999999999987532 234446677777875333 444
Q ss_pred HHHHHH
Q psy17691 649 EYQDIA 654 (673)
Q Consensus 649 ~yv~~a 654 (673)
+..+..
T Consensus 188 ~L~~~i 193 (224)
T 2jzc_A 188 ETGLIA 193 (224)
T ss_dssp TTTHHH
T ss_pred HHHHHH
Confidence 443333
No 312
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=85.07 E-value=14 Score=43.54 Aligned_cols=94 Identities=11% Similarity=-0.041 Sum_probs=76.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRL----CPTHADSLNNLANIKREQGYIEEATRLYLKALEVF-PEFAAAHSNLASVLQ 195 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~----~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~-p~~~~~~~~la~~~~ 195 (673)
..+..+.+.|+.++|...|++.-+. -.-+...|+.|-..|.+.|++++|.+.|++..+.. .-+...|+.+-..+.
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glc 211 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMG 211 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 4446677899999999999775432 23467899999999999999999999999997753 335778888888899
Q ss_pred HcCC-HHHHHHHHHHHHHhC
Q psy17691 196 QQGK-LTDALLHYKEAIRIQ 214 (673)
Q Consensus 196 ~~g~-~~eA~~~~~~al~~~ 214 (673)
+.|+ .++|.+.+++..+..
T Consensus 212 K~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 212 RQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHTCCHHHHHHHHHHHHHHT
T ss_pred hCCCcHHHHHHHHHHHHHcC
Confidence 9998 578999999988764
No 313
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=82.52 E-value=9.3 Score=40.02 Aligned_cols=92 Identities=12% Similarity=-0.072 Sum_probs=72.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCC----HHHHH
Q psy17691 122 YIISVLLLIQVSEAEECYNTALRLCPT------HADSLNNLANIKREQGYIEEATRLYLKALEVF---PEF----AAAHS 188 (673)
Q Consensus 122 ~~~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~---p~~----~~~~~ 188 (673)
.+..++..|+|.+|...+.+.++.-.. -.+++..-..+|...+++.++...|.++.... +.+ +....
T Consensus 105 L~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~ 184 (394)
T 3txn_A 105 LIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDL 184 (394)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHH
Confidence 345567899999999999998885221 15677788889999999999999999997653 122 34455
Q ss_pred HHHHHHH-HcCCHHHHHHHHHHHHHh
Q psy17691 189 NLASVLQ-QQGKLTDALLHYKEAIRI 213 (673)
Q Consensus 189 ~la~~~~-~~g~~~eA~~~~~~al~~ 213 (673)
.-|..+. ..++|.+|...|-++++.
T Consensus 185 ~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 185 QSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 6688888 899999999999988754
No 314
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.12 E-value=8.7 Score=40.77 Aligned_cols=95 Identities=6% Similarity=-0.104 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CC----HHHHHHHH
Q psy17691 121 SYIISVLLLIQVSEAEECYNTALRLCP---THADSLNNLANIKREQGYIEEATRLYLKALEVFP--EF----AAAHSNLA 191 (673)
Q Consensus 121 ~~~~~~~~~g~~~~A~~~~~~al~~~p---~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p--~~----~~~~~~la 191 (673)
..+..++..|++++|.++|.++..... .-.+.+.....++...+++..+...++++..... .+ .......|
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~g 215 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYG 215 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH
Confidence 455666779999999999999988643 2367888889999999999999999999976522 22 23445567
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Q psy17691 192 SVLQQQGKLTDALLHYKEAIRIQP 215 (673)
Q Consensus 192 ~~~~~~g~~~eA~~~~~~al~~~p 215 (673)
.++...++|.+|...|-.++....
T Consensus 216 l~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 216 IHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHhChHHHHHHHHHHHhccCC
Confidence 778889999999999988876543
No 315
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.28 E-value=8.6 Score=46.43 Aligned_cols=111 Identities=13% Similarity=-0.018 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------
Q psy17691 155 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRI--------------------- 213 (673)
Q Consensus 155 ~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~--------------------- 213 (673)
.+...+...+.++-|.+ .+...|.++...+.+|.++...|++++|..+|+++-.-
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 34445566666665543 44567888888899999999999999999999886221
Q ss_pred --CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCH----HHHHHHHHHHHHcCCCc
Q psy17691 214 --QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINP-GFA----DAHSNLASIHKDSGKRG 269 (673)
Q Consensus 214 --~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p-~~~----~a~~~La~~~~~~g~~~ 269 (673)
....+..|..+..++.+.|.++.+++..+.|++..+ ++. ..|.++=..+.+.|+|+
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye 955 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFD 955 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSG
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHH
Confidence 111235677888899999999999999999998764 333 25777778888999987
No 316
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=74.73 E-value=1.1e+02 Score=33.93 Aligned_cols=113 Identities=12% Similarity=-0.057 Sum_probs=72.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 156 LANIKREQGYIEEATRLYLKALEVFPEFAA----AHSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEM 231 (673)
Q Consensus 156 Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~----~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~ 231 (673)
++.......+.+.|...+.+.-+...-+.. .+..++.-+...+...++...+.+......++.......+. ..+.
T Consensus 220 ~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~-Alr~ 298 (618)
T 1qsa_A 220 VAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRM-ALGT 298 (618)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHH-HHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHH-HHHC
Confidence 344445556888999998887654433332 22333333344453567777777766654443333333344 4567
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q psy17691 232 QDIQGALQCYSRAIQINPGFADAHSNLASIHKDSGKRG 269 (673)
Q Consensus 232 g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g~~~ 269 (673)
|+++.|..+|++.-..........+-+|.++...|+.+
T Consensus 299 ~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~ 336 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (618)
T ss_dssp TCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHH
Confidence 99999999998755443456778889999999998865
No 317
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.66 E-value=36 Score=36.12 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=71.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCC----HHHHH
Q psy17691 122 YIISVLLLIQVSEAEECYNTALRLCP--TH----ADSLNNLANIKREQGYIEEATRLYLKALE---VFPEF----AAAHS 188 (673)
Q Consensus 122 ~~~~~~~~g~~~~A~~~~~~al~~~p--~~----~~a~~~Lg~~~~~~g~~~eA~~~~~~al~---~~p~~----~~~~~ 188 (673)
++..+...|++.+|...++....-.- .+ .+.+.....+|...+++.+|...++++.. ..+.. ...+.
T Consensus 143 La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~ 222 (445)
T 4b4t_P 143 LVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYN 222 (445)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHH
Confidence 34455679999999999998865321 11 56788888999999999999999999743 23333 34667
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 189 NLASVLQQQGKLTDALLHYKEAIRI 213 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~al~~ 213 (673)
..|.++...++|.+|-.+|..+++.
T Consensus 223 ~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 223 LLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 7899999999999999999888764
No 318
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.91 E-value=31 Score=40.58 Aligned_cols=122 Identities=13% Similarity=0.031 Sum_probs=62.1
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC--HHHHHHHHHHHHHcCCHHH
Q psy17691 126 VLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEV-FPEF--AAAHSNLASVLQQQGKLTD 202 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-~p~~--~~~~~~la~~~~~~g~~~e 202 (673)
+...|.++-| ++.+..-|.++..-+.+|.+|...|++++|..+|++|-.- .... .........+.-
T Consensus 820 L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~------- 888 (950)
T 4gq2_M 820 LFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE------- 888 (950)
T ss_dssp HHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHH-------
T ss_pred HHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccC-------
Confidence 3445555433 2344455556555666666666666666666666665321 1000 000000000000
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHH----HHHHHHHHHHHc
Q psy17691 203 ALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI-NPGFAD----AHSNLASIHKDS 265 (673)
Q Consensus 203 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l-~p~~~~----a~~~La~~~~~~ 265 (673)
..+........|.....++.+.+-++-+++..+.|++. .+++.. .|..+=......
T Consensus 889 -------~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 889 -------KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp -------HTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -------cccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhC
Confidence 00001112346778888888888888888888888875 344443 444444444433
No 319
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=66.34 E-value=86 Score=31.46 Aligned_cols=27 Identities=15% Similarity=0.062 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 216 SFADAYSNMGNTLKEMQDIQGALQCYS 242 (673)
Q Consensus 216 ~~~~~~~~lg~~~~~~g~~~eA~~~~~ 242 (673)
.+++.|..+|..|.+.|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 478889999999999999998888874
No 320
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=63.44 E-value=1.3e+02 Score=30.58 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=22.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 215 PSFADAYSNMGNTLKEMQDIQGALQCY 241 (673)
Q Consensus 215 p~~~~~~~~lg~~~~~~g~~~eA~~~~ 241 (673)
-.+++.+..+|..|.+.+++.+|..+|
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 346888999999999999999988887
No 321
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=61.93 E-value=12 Score=39.36 Aligned_cols=110 Identities=13% Similarity=0.004 Sum_probs=72.1
Q ss_pred hhhhccCChhhhhh-HHHHHHHcCCCCCe-EEeccCcChHHHHHhc------ccccEE-ecCCCCCCcchhhhhhh----
Q psy17691 546 ILWLLKFPAVGEAN-IQATAQALGLDQHR-ILFSNVAAKEEHVRRG------QLADVC-LDTPLCNGHTTSMDVLW---- 612 (673)
Q Consensus 546 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~r-v~~~~~~~~~~~~~~~------~~~Di~-Ld~~p~~g~~t~~eal~---- 612 (673)
.+|.+.. +.+... ..+.+..+|..+.. +.+.|..+.+.+...+ ..+|.+ +.-| ||.+-|+-++
T Consensus 265 ~Ig~~~n-GaGlam~t~D~i~~~Gg~paNflDvgG~a~~e~~~~al~~il~d~~v~~ilvni~---ggi~~~d~vA~gii 340 (395)
T 2fp4_B 265 NIACFVN-GAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIF---GGIVNCAIIANGIT 340 (395)
T ss_dssp SEEEEES-SHHHHHHHHHHHHHTTCCBCEEEECCSSCCHHHHHHHHHHHHHCTTCCEEEEEEE---ESSSCHHHHHHHHH
T ss_pred eEEEEec-CchHHHHHHHHHHHcCCCcCCcEEECCCCCHHHHHHHHHHHhCCCCCCEEEEEec---CCccCcHHHHHHHH
Confidence 3455543 333332 35677888877654 7777776666554433 234444 4333 5666554433
Q ss_pred -------cCCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCC
Q psy17691 613 -------TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD 660 (673)
Q Consensus 613 -------~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d 660 (673)
..+|||.+-+.+... -+..+|+..|++=..+.|.++=++++++++++
T Consensus 341 ~a~~~~~~~~Pivvrl~G~n~~-~g~~~L~~~gl~~~~~~~~~~Aa~~~v~~~~~ 394 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGTNVH-EAQNILTNSGLPITSAVDLEDAAKKAVASVTK 394 (395)
T ss_dssp HHHHHHTCCSCEEEEEEETTHH-HHHHHHHHTCSCCEECSSHHHHHHHHHHTTC-
T ss_pred HHHHhcCCCCeEEEEcCCCCHH-HHHHHHHHCCCceEeCCCHHHHHHHHHHHhhc
Confidence 479988876665543 37789988899988889999999999999875
No 322
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.37 E-value=48 Score=39.01 Aligned_cols=51 Identities=10% Similarity=-0.054 Sum_probs=26.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17691 156 LANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEA 210 (673)
Q Consensus 156 Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~a 210 (673)
+...+...|.++-|. +.+...|.++..-+.+|.++...|++++|..+|++|
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 333444455544322 233445555555556666666666666666666554
No 323
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=58.10 E-value=19 Score=37.55 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=73.0
Q ss_pred hhhhccCChhhhhh-HHHHHHHcCCCCCe-EEeccCcChHHHHHhcc------cccEE-ecCCCCCCcchhhhhhh----
Q psy17691 546 ILWLLKFPAVGEAN-IQATAQALGLDQHR-ILFSNVAAKEEHVRRGQ------LADVC-LDTPLCNGHTTSMDVLW---- 612 (673)
Q Consensus 546 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~r-v~~~~~~~~~~~~~~~~------~~Di~-Ld~~p~~g~~t~~eal~---- 612 (673)
.+|.+.. +.+-.. ..+.+..+|..+.. +.+.|..+.+.+...++ .+|.+ +.-| ||.|.|+.++
T Consensus 258 ~Ig~~~n-GaGl~m~t~D~i~~~Gg~~aNflD~gG~a~~~~~~~~~~~il~d~~v~~ilvni~---ggi~~~~~vA~gii 333 (388)
T 2nu8_B 258 NIGCMVN-GAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIF---GGIVRCDLIADGII 333 (388)
T ss_dssp SEEEEES-SHHHHHHHHHHHHHTTCCBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEEEEEEE---SCSSCHHHHHHHHH
T ss_pred EEEEEeC-CCchhhhhhHHHHHcCCCcCceeEecCCCCHHHHHHHHHHHhcCCCCCEEEEEec---CCcCCchHHHHHHH
Confidence 3455543 333332 35677888877654 77777777665544332 34444 4433 6777666544
Q ss_pred -------cCCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCC
Q psy17691 613 -------TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD 660 (673)
Q Consensus 613 -------~GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d 660 (673)
.++|||.+-+.+. ..-+..+|+..|++=..+.|.++=++++++++++
T Consensus 334 ~a~~~~~~~~pivvrl~G~n-~~~g~~~l~~~g~~~~~~~~~~~aa~~~v~~~~~ 387 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGNN-AELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387 (388)
T ss_dssp HHHHHHTCCSCEEEEEESTT-HHHHHHHHHTTCSSEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHhcCCCCeEEEEeCCCC-HHHHHHHHHHCCCceecCCCHHHHHHHHHHHhhc
Confidence 4699887666554 4566678888899888889999999999999864
No 324
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=57.16 E-value=1e+02 Score=27.11 Aligned_cols=52 Identities=21% Similarity=0.119 Sum_probs=24.2
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 161 REQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIR 212 (673)
Q Consensus 161 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~ 212 (673)
..+|+-++-.+.+...+...+-+++.+..+|.+|.+.|+..+|.+.+.+|.+
T Consensus 102 v~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3444444444444444444444455555555555555555555555555444
No 325
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.05 E-value=12 Score=40.37 Aligned_cols=66 Identities=21% Similarity=0.110 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 150 ADSLNNLANIKREQGYIEEATRLYLKALEVFPEF-------AAAHSNLASVLQQQGKLTDALLHYKEAIRIQPSF 217 (673)
Q Consensus 150 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~ 217 (673)
+.+++.+-..|...+.+++|.....++. .|.. ...++.+|.++..+++|.+|.+++..|++..|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 5577888889999999999999999985 4432 4567788999999999999999999999988764
No 326
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=56.69 E-value=1.1e+02 Score=28.51 Aligned_cols=64 Identities=9% Similarity=0.028 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 184 AAAHSNLASVLQQQGKLTDALLHYKEAIRI--QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQIN 248 (673)
Q Consensus 184 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~ 248 (673)
..+|..++..+ ..+...++.+.|...... .-..+..|...|..+...|++.+|.+.|+.+++..
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 34555555543 123355666666655543 34556667777777777777777777777777654
No 327
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=56.43 E-value=43 Score=29.45 Aligned_cols=117 Identities=15% Similarity=0.049 Sum_probs=75.6
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHH------------------HHHHHH--HHcCCHHHHHHHHHHHHhhCCCCHH
Q psy17691 126 VLLLIQVSEAEECYNTALRLCPTHADSLN------------------NLANIK--REQGYIEEATRLYLKALEVFPEFAA 185 (673)
Q Consensus 126 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~------------------~Lg~~~--~~~g~~~eA~~~~~~al~~~p~~~~ 185 (673)
...-|..++..+...+...-.+-...-|+ .+|.++ ...|+...-+.+|-+. +-. .+
T Consensus 17 ~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~---n~~-se 92 (172)
T 1wy6_A 17 FLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVIN---NTL-NE 92 (172)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHT---TCC-CH
T ss_pred HHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHh---cch-HH
Confidence 34457778888888777776543221111 111111 1335556666665442 222 12
Q ss_pred HHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 186 AHSNLA-SVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 186 ~~~~la-~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
+..+| ..+..+|+-++-.+.+...+.-++-+++.+..+|.+|.+.|+..+|.+.+.+|-+.
T Consensus 93 -~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 -HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp -HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 33444 35667888888888888877777777999999999999999999999999999765
No 328
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=56.42 E-value=7.1 Score=38.26 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=27.4
Q ss_pred ccccEEecCCCCCCcchhhhhhhcCCceeecCCC
Q psy17691 590 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE 623 (673)
Q Consensus 590 ~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~ 623 (673)
..-|++||+| .+.|||+++|+-+|.-+|.+.-+
T Consensus 211 ~~~~~vlD~f-~GsGtt~~~a~~~gr~~ig~e~~ 243 (260)
T 1g60_A 211 NPNDLVLDCF-MGSGTTAIVAKKLGRNFIGCDMN 243 (260)
T ss_dssp CTTCEEEESS-CTTCHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEECC-CCCCHHHHHHHHcCCeEEEEeCC
Confidence 4679999999 67799999999999888876543
No 329
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=52.77 E-value=70 Score=29.88 Aligned_cols=79 Identities=6% Similarity=-0.015 Sum_probs=59.0
Q ss_pred HHHHHHHHhCC------CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHcCCHHHHHH
Q psy17691 137 ECYNTALRLCP------TH---ADSLNNLANIKREQGYIEEATRLYLKALEV--FPEFAAAHSNLASVLQQQGKLTDALL 205 (673)
Q Consensus 137 ~~~~~al~~~p------~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--~p~~~~~~~~la~~~~~~g~~~eA~~ 205 (673)
..++++++..- ++ ..+|..++..+ ..++..++.+.|.-.... .-..+..|...|..+...|++.+|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 56777777532 22 44566666554 234477888888887765 45668899999999999999999999
Q ss_pred HHHHHHHhCCC
Q psy17691 206 HYKEAIRIQPS 216 (673)
Q Consensus 206 ~~~~al~~~p~ 216 (673)
.|+.+++....
T Consensus 137 Vy~~GI~~~A~ 147 (202)
T 3esl_A 137 LLELGAENNCR 147 (202)
T ss_dssp HHHHHHHTTCB
T ss_pred HHHHHHHcCCc
Confidence 99999998654
No 330
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=51.53 E-value=60 Score=26.82 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=45.1
Q ss_pred hhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhh--cCCceeecCCCcc
Q psy17691 556 GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW--TGTPVVTLPGETL 625 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~--~GvPvvt~~g~~~ 625 (673)
....+++.+.+.|++ -.|.-.+....+++ ...+|+++-|.+...-..-++... .|+||+...+..+
T Consensus 20 l~~kl~~~~~~~gi~-~~i~~~~~~~~~~~---~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~~~~y 87 (109)
T 2l2q_A 20 LVQRIEKYAKSKNIN-ATIEAIAETRLSEV---VDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDY 87 (109)
T ss_dssp HHHHHHHHHHHHTCS-EEEEEECSTTHHHH---TTTCSEEEECSCCSSHHHHHHHHHHHHTCCEEECCHHHH
T ss_pred HHHHHHHHHHHCCCC-eEEEEecHHHHHhh---cCCCCEEEECCccHHHHHHHHHHhcccCCCEEEEChHHh
Confidence 356889999999996 33555555444443 578999999887765544455443 5899998776333
No 331
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=48.72 E-value=96 Score=35.30 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=39.1
Q ss_pred CC--eEEeccCcChHHHHHhcccccEEecCC--CC-CCcchhhhhhhcCCcee-ecCC
Q psy17691 571 QH--RILFSNVAAKEEHVRRGQLADVCLDTP--LC-NGHTTSMDVLWTGTPVV-TLPG 622 (673)
Q Consensus 571 ~~--rv~~~~~~~~~~~~~~~~~~Di~Ld~~--p~-~g~~t~~eal~~GvPvv-t~~g 622 (673)
++ ||+|++--...-=-..+..|||++-+. |+ ..||+-+=+|.-|++.| |+.|
T Consensus 592 ~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 592 SPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp TTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESST
T ss_pred CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCC
Confidence 57 899997554444445678999998854 34 88999999999999877 4444
No 332
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=45.99 E-value=0.0048 Score=65.80 Aligned_cols=136 Identities=11% Similarity=0.031 Sum_probs=100.0
Q ss_pred CCCChhHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy17691 113 SPDDGTTFSYIISVLLLIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLAS 192 (673)
Q Consensus 113 ~p~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~ 192 (673)
.|+.+..-..+..++..|.|+.|.-+|... ++ |..|+.++..+|+|.+|++.-+|| ++..+|-....
T Consensus 141 ~~N~A~iq~VGDrcf~e~lYeAAKilys~i----sN----~akLAstLV~L~~yq~AVdaArKA-----ns~ktWKeV~~ 207 (624)
T 3lvg_A 141 GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV----SN----FGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCF 207 (624)
T ss_dssp CCSSSCTHHHHHHHHHSCCSTTSSTTGGGS----CC----CTTTSSSSSSCSGGGSSTTTTTTC-----CSSCSHHHHTH
T ss_pred CCCcccHHHHHHHHHHccCHHHHHHHHHhC----cc----HHHHHHHHHHHHHHHHHHHHHHhc-----CChhHHHHHHH
Confidence 466667777788888888888887666443 22 345777888888888888877664 55667877888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy17691 193 VLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDS 265 (673)
Q Consensus 193 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~ 265 (673)
.+...+++.-|.-+--..+- +++. +-.+-..|...|.++|-+..++.++.+..-+......||.+|.+-
T Consensus 208 ACvd~~EfrLAqicGLniIv-hade---L~elv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY 276 (624)
T 3lvg_A 208 ACVDGKEFRLAQMCGLHIVV-HADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 276 (624)
T ss_dssp HHHHSCTTTTTTHHHHHHHC-CSSC---CSGGGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSS
T ss_pred HHhCchHHHHHHHhcchhcc-cHHH---HHHHHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhc
Confidence 88888888877666554442 3332 233445677889999999999999998888899999999988654
No 333
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=44.92 E-value=1.3e+02 Score=24.80 Aligned_cols=96 Identities=10% Similarity=0.003 Sum_probs=58.9
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEEecCCCCCCcchhhhhhhc---CCceeecCCCcchhh
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTPLCNGHTTSMDVLWT---GTPVVTLPGETLASR 628 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~Ld~~p~~g~~t~~eal~~---GvPvvt~~g~~~~~r 628 (673)
......+...+...|. +|.... +.++.+..+ ...|+++ .|-..|..+++.+.. .+|||.+.+..-...
T Consensus 28 ~~~~~~l~~~L~~~g~---~v~~~~--~~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~ 100 (137)
T 2pln_A 28 SVLGGEIEKGLNVKGF---MADVTE--SLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVSSDNPTSEE 100 (137)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEES--CHHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTTSEEEEEESSCCHHH
T ss_pred HHHHHHHHHHHHHcCc---EEEEeC--CHHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCCccEEEEeCCCCHHH
Confidence 3445677888888776 344332 233433322 3579999 666667777777764 899999987654332
Q ss_pred hHHHHHHhcCCCccccC---CHHHHHHHHHHhc
Q psy17691 629 VAASQLATLGCPELIAR---THKEYQDIAIRLG 658 (673)
Q Consensus 629 ~~~~~l~~~gl~~~ia~---~~~~yv~~a~~la 658 (673)
.. -....|..+++.. +.++..+...++.
T Consensus 101 ~~--~~~~~g~~~~l~kP~~~~~~l~~~i~~~~ 131 (137)
T 2pln_A 101 EV--HAFEQGADDYIAKPYRSIKALVARIEARL 131 (137)
T ss_dssp HH--HHHHTTCSEEEESSCSCHHHHHHHHHHHT
T ss_pred HH--HHHHcCCceeeeCCCCCHHHHHHHHHHHH
Confidence 22 2335688887765 5566665554443
No 334
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=42.73 E-value=1.3e+02 Score=34.24 Aligned_cols=52 Identities=19% Similarity=0.160 Sum_probs=39.1
Q ss_pred CC--eEEeccCcChHHHHHhcccccEEecCC--CC-CCcchhhhhhhcCCcee-ecCC
Q psy17691 571 QH--RILFSNVAAKEEHVRRGQLADVCLDTP--LC-NGHTTSMDVLWTGTPVV-TLPG 622 (673)
Q Consensus 571 ~~--rv~~~~~~~~~~~~~~~~~~Di~Ld~~--p~-~g~~t~~eal~~GvPvv-t~~g 622 (673)
++ ||+|++--...-=-..+..|||++-+. |+ ..||+-+=+|.-|++.| |+.|
T Consensus 602 ~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 602 GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp GGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCC
Confidence 57 899997554444445678999998854 34 88999999999999877 4444
No 335
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=42.11 E-value=38 Score=27.22 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAI 245 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al 245 (673)
.+...+..+.+.|+|++||++.++|.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 44556666677777777777666654
No 336
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=41.32 E-value=44 Score=26.30 Aligned_cols=19 Identities=42% Similarity=0.698 Sum_probs=10.1
Q ss_pred HHHcCCHHHHHHHHHHHHH
Q psy17691 194 LQQQGKLTDALLHYKEAIR 212 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~ 212 (673)
.-+.|+|++|+.+|.++++
T Consensus 21 ~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 21 ADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHH
Confidence 3555555555555555443
No 337
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=40.91 E-value=12 Score=38.13 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=35.2
Q ss_pred ccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhHHHHHHhcC
Q psy17691 590 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLG 638 (673)
Q Consensus 590 ~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~~~~l~~~g 638 (673)
..-|++|||| .+.|||..+|+-+|.-.|.+.=+...-.++..=++..+
T Consensus 251 ~~~~~VlDpF-~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 251 EPDDLVVDIF-GGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CTTCEEEETT-CTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCCEEEECC-CCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 5679999999 67799999999999988887766554444433333334
No 338
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=40.28 E-value=64 Score=24.80 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=17.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy17691 155 NLANIKREQGYIEEATRLYLKALEVFPEFA 184 (673)
Q Consensus 155 ~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 184 (673)
.+|..+...|++++|..+|-+|+...|.-.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 345555556666666666666666555543
No 339
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=39.98 E-value=78 Score=26.50 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=48.8
Q ss_pred hhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHHcCC
Q psy17691 490 STLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALGL 569 (673)
Q Consensus 490 ~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 569 (673)
..++.++++|+..|+..+.+.|+.... ++. .-.|.+. ..--+.+.+++.+.||
T Consensus 23 ~~L~~ia~~l~~~p~~~i~I~GhtD~~----------------G~~---------~~N~~LS--~~RA~aV~~~L~~~Gi 75 (118)
T 2hqs_H 23 QMLDAHANFLRSNPSYKVTVEGHADER----------------GTP---------EYNISLG--ERRANAVKMYLQGKGV 75 (118)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECCCSS----------------SCH---------HHHHHHH--HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCcEEEEEEECCCC----------------CCH---------HHHHHHH--HHHHHHHHHHHHHcCC
Confidence 457788888999999888888743110 000 1122211 1123467778889999
Q ss_pred CCCeEEeccCcC--------hHHHHHhcccccEEecCC
Q psy17691 570 DQHRILFSNVAA--------KEEHVRRGQLADVCLDTP 599 (673)
Q Consensus 570 ~~~rv~~~~~~~--------~~~~~~~~~~~Di~Ld~~ 599 (673)
+++||...|.-. .++-.+.=+.++|.+-+.
T Consensus 76 ~~~ri~~~g~G~~~P~~~n~t~~~r~~NRRVei~i~~~ 113 (118)
T 2hqs_H 76 SADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVYLEH 113 (118)
T ss_dssp CGGGEEEEECTTSSCSSCCSSHHHHHHHSEEEEECC--
T ss_pred CHHHEEEEEecCCCcCCCCcCHHHHHhCCcEEEEEecC
Confidence 999998875411 123344456677776554
No 340
>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} SCOP: d.79.7.1
Probab=39.88 E-value=49 Score=28.56 Aligned_cols=76 Identities=12% Similarity=0.104 Sum_probs=46.5
Q ss_pred cEEEecCCcccccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhcc
Q psy17691 475 AIVYCNFNQLYKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLK 551 (673)
Q Consensus 475 ~~~~~~~~~~~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (673)
.+.|.. ...+++++ .++-++.+|+..|+.++.+.|+.... ++ ..-.|.+.
T Consensus 31 ~i~F~~--~sa~L~~~~~~~L~~ia~~L~~~p~~~i~I~GhtD~~----------------G~---------~~~N~~LS 83 (134)
T 2aiz_P 31 TVYFGF--DKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDER----------------GT---------PEYNIALG 83 (134)
T ss_dssp EEECCT--TCCCCCHHHHHHHHHHHHHHHHSTTCCEEEEEECCSS----------------SC---------HHHHHHHH
T ss_pred eEEecC--CCceeCHHHHHHHHHHHHHHHHCCCceEEEEEEECCC----------------CC---------HHHHHHHH
Confidence 345554 33455555 48888899999999888888743110 00 01122211
Q ss_pred CChhhhhhHHHHHHHcCCCCCeEEeccC
Q psy17691 552 FPAVGEANIQATAQALGLDQHRILFSNV 579 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~g~~~~rv~~~~~ 579 (673)
..--..+.+++.+.||+++||...|.
T Consensus 84 --~~RA~aV~~~L~~~Gi~~~ri~~~g~ 109 (134)
T 2aiz_P 84 --QRRADAVKGYLAGKGVDAGKLGTVSY 109 (134)
T ss_dssp --HHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred --HHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 11234677888899999999988764
No 341
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=39.08 E-value=37 Score=30.57 Aligned_cols=63 Identities=8% Similarity=0.042 Sum_probs=41.8
Q ss_pred hhhHHHHHHHcCCCCCeEEeccCcC--------hHHHHHhcccccEE---ecCC--CCCCcchhhh---hhhcCCceeec
Q psy17691 557 EANIQATAQALGLDQHRILFSNVAA--------KEEHVRRGQLADVC---LDTP--LCNGHTTSMD---VLWTGTPVVTL 620 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~~~~~--------~~~~~~~~~~~Di~---Ld~~--p~~g~~t~~e---al~~GvPvvt~ 620 (673)
.+++.+.+++.|+. ++.|... .+.=+...+.||++ |||| +..-..|..| |.+.|.|||.+
T Consensus 29 ~~~l~~~l~~~G~~----v~~P~~~~~~~~~~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l 104 (161)
T 2f62_A 29 YNKVRELLKKENVM----PLIPTDNEATEALDIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTF 104 (161)
T ss_dssp HHHHHHHHHTTTCE----EECTTTTCCSSHHHHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCE----EECCCccCcchHHHHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEE
Confidence 35677788888873 4445321 12226778899998 5555 2334557777 67899999998
Q ss_pred CCC
Q psy17691 621 PGE 623 (673)
Q Consensus 621 ~g~ 623 (673)
..+
T Consensus 105 ~~d 107 (161)
T 2f62_A 105 TSD 107 (161)
T ss_dssp CSC
T ss_pred EcC
Confidence 765
No 342
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=38.22 E-value=1.3e+02 Score=27.39 Aligned_cols=102 Identities=10% Similarity=0.175 Sum_probs=62.4
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcc---------------cccEE-ecC-CCCCCcchhhhhhh----
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------------LADVC-LDT-PLCNGHTTSMDVLW---- 612 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~---------------~~Di~-Ld~-~p~~g~~t~~eal~---- 612 (673)
......+...+...|.. +|.... +..+-+..+. ..|++ +|- .|-..|..+++.+.
T Consensus 71 ~~~~~~l~~~L~~~g~~--~v~~a~--~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~ 146 (206)
T 3mm4_A 71 FISRKVATGKLKKMGVS--EVEQCD--SGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEK 146 (206)
T ss_dssp HHHHHHHHHHHHHTTCS--EEEEES--SHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC--eeeeeC--CHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhh
Confidence 34466788888888873 444433 2344444332 46877 774 47777888888775
Q ss_pred ---cCCceeecCCCc-chhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCH
Q psy17691 613 ---TGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR 661 (673)
Q Consensus 613 ---~GvPvvt~~g~~-~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~ 661 (673)
..+|||.+.+.. -.... .-....|..+++....++..+...++....
T Consensus 147 ~~~~~~piI~ls~~~~~~~~~--~~~~~~Ga~~~l~KP~~~L~~~i~~~l~~~ 197 (206)
T 3mm4_A 147 SYGVRTPIIAVSGHDPGSEEA--RETIQAGMDAFLDKSLNQLANVIREIESKR 197 (206)
T ss_dssp TTTCCCCEEEEESSCCCHHHH--HHHHHHTCSEEEETTCTTHHHHHHHHC---
T ss_pred hcCCCCcEEEEECCCCcHHHH--HHHHhCCCCEEEcCcHHHHHHHHHHHHhhh
Confidence 579999998865 32221 123356899988876665555555555433
No 343
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=38.11 E-value=1.9e+02 Score=24.67 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=62.8
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecC-CCCCCcchhhhhhh-----cCCceeecCCCc
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLW-----TGTPVVTLPGET 624 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~-~p~~g~~t~~eal~-----~GvPvvt~~g~~ 624 (673)
...+..++..++..|.. .|.... +..+-+..+ ...|++ +|= -|--.|..+++.+- ..+|||.+.+..
T Consensus 22 ~~~r~~l~~~L~~~G~~--~v~~a~--~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 22 STMRRIVKNLLRDLGFN--NTQEAD--DGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHHHHHHTTCC--CEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHcCCc--EEEEEC--CHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 34567788889999973 233221 222222222 246777 784 59989999999884 579999998865
Q ss_pred chhhhHHHHHHhcCCCccccC--CHHHHHHHHHHh
Q psy17691 625 LASRVAASQLATLGCPELIAR--THKEYQDIAIRL 657 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~l 657 (673)
...... -....|..+++.. +.++..+..-++
T Consensus 98 ~~~~~~--~~~~~Ga~~yl~KP~~~~~L~~~i~~~ 130 (134)
T 3to5_A 98 KREQII--EAAQAGVNGYIVKPFTAATLKEKLDKI 130 (134)
T ss_dssp CHHHHH--HHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CHHHHH--HHHHCCCCEEEECCCCHHHHHHHHHHH
Confidence 544222 2235799998876 677766655544
No 344
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=37.46 E-value=75 Score=24.39 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=16.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy17691 190 LASVLQQQGKLTDALLHYKEAIRIQPSFA 218 (673)
Q Consensus 190 la~~~~~~g~~~eA~~~~~~al~~~p~~~ 218 (673)
+|..+...|++++|..+|-+|+...|+-.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 45555555556666665555555555433
No 345
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=37.05 E-value=2.5e+02 Score=29.23 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=32.5
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 203 ALLHYKEAIRI-----QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 203 A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
++..|.+++.. ...+..-|..+|..+++.+++.+|+.++-+|-..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 56666666654 3445667788888888888998888888776543
No 346
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=36.08 E-value=2.2e+02 Score=32.51 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=39.2
Q ss_pred CC--eEEeccCcChHHHHHhcccccEEecCC--CC-CCcchhhhhhhcCCc-eeecCCC
Q psy17691 571 QH--RILFSNVAAKEEHVRRGQLADVCLDTP--LC-NGHTTSMDVLWTGTP-VVTLPGE 623 (673)
Q Consensus 571 ~~--rv~~~~~~~~~~~~~~~~~~Di~Ld~~--p~-~g~~t~~eal~~GvP-vvt~~g~ 623 (673)
++ ||+|++--+..-=-..+..|||+|-+. |+ ..||+-+=+|.-|++ ++|++|-
T Consensus 626 ~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGa 684 (824)
T 2gj4_A 626 GDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGA 684 (824)
T ss_dssp GGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTT
T ss_pred CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCc
Confidence 46 899997554444445788999998864 34 789999999988876 6677763
No 347
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=35.75 E-value=1.7e+02 Score=29.88 Aligned_cols=82 Identities=18% Similarity=0.190 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh-----CCCCHHHHHHH
Q psy17691 152 SLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG--KLTDALLHYKEAIRI-----QPSFADAYSNM 224 (673)
Q Consensus 152 a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~la~~~~~~g--~~~eA~~~~~~al~~-----~p~~~~~~~~l 224 (673)
....|-+++++.|..+ ..+-++.|||.+-...- ....++..|.+++.. +..+...|..+
T Consensus 237 LQq~LLWLLyD~GhL~--------------rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtyl 302 (472)
T 3re2_A 237 LQQELLWLLYDMGHIK--------------TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYL 302 (472)
T ss_dssp HHHHHHHHHHHTTTTT--------------TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHH
T ss_pred HHHHHHHHHHhccchh--------------hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhh
Confidence 3455666666665422 33455555555443321 112366777777664 34556778889
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 225 GNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 225 g~~~~~~g~~~eA~~~~~~Al~l 247 (673)
|..+++.+++.+|+.++-+|-..
T Consensus 303 gGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 303 GGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhhhcchHHHHHHHHHHHHHH
Confidence 99999999999999988877543
No 348
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=35.66 E-value=1.7e+02 Score=24.43 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=57.4
Q ss_pred hhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecC-CCCCCcchhhhhhhc-----CCceeecCCCcc
Q psy17691 555 VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLWT-----GTPVVTLPGETL 625 (673)
Q Consensus 555 ~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~-~p~~g~~t~~eal~~-----GvPvvt~~g~~~ 625 (673)
.....+...+...|. +|.... +..+.+..+ ...|++ +|. .|-..|...++.+.. ++|||.+.+..-
T Consensus 19 ~~~~~l~~~L~~~g~---~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 19 PALAASISALSQEGF---DIIQCG--NAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRAT 93 (147)
T ss_dssp GGGHHHHHHHHHHTE---EEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCC
T ss_pred HHHHHHHHHHHHcCC---eEEEeC--CHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCC
Confidence 345677778888776 344332 233433332 246777 774 466667788887764 799999887654
Q ss_pred hhhhHHHHHHhcCCCccccC--CHHHHHHHHHHh
Q psy17691 626 ASRVAASQLATLGCPELIAR--THKEYQDIAIRL 657 (673)
Q Consensus 626 ~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~l 657 (673)
..... -....|..+++.. +.++..+...++
T Consensus 94 ~~~~~--~~~~~g~~~~l~kp~~~~~L~~~i~~~ 125 (147)
T 2zay_A 94 AKEEA--QLLDMGFIDFIAKPVNAIRLSARIKRV 125 (147)
T ss_dssp HHHHH--HHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHH--HHHhCCCCEEEeCCCCHHHHHHHHHHH
Confidence 33222 2235788887765 456655544443
No 349
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=35.25 E-value=62 Score=29.70 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=44.8
Q ss_pred EEEecCCcccccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccC
Q psy17691 476 IVYCNFNQLYKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKF 552 (673)
Q Consensus 476 ~~~~~~~~~~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (673)
+.|.+ ....+++. .++..+.+|+..|+ .+.+.|++..-.... + . ...-.|.++.
T Consensus 62 i~F~~--gsa~l~~~~~~~L~~ia~~L~~~~~-~I~I~GHTD~~g~~~------------~-~-------~~~~N~~LS~ 118 (183)
T 2zvy_A 62 PMFKT--GSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYAN------------G-E-------KGYSNWELSA 118 (183)
T ss_dssp CSBCT--TCCSBCHHHHHHHHHHHHHHTTSCC-CEEEEEECCSSCTTC------------S-T-------TSSCHHHHHH
T ss_pred eecCC--CCcccCHHHHHHHHHHHHHHHhCCC-eEEEEEEeCCCCCcc------------c-c-------ccccHHHHHH
Confidence 44544 33455555 47778888999999 676777431110000 0 0 0012344321
Q ss_pred ChhhhhhHHHHHHHcCCCCCeE-EeccC
Q psy17691 553 PAVGEANIQATAQALGLDQHRI-LFSNV 579 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~rv-~~~~~ 579 (673)
.--..+.+++...||+++|| ...|.
T Consensus 119 --~RA~aV~~~L~~~Gi~~~ri~~~~G~ 144 (183)
T 2zvy_A 119 --DRANASRRELVAGGLDNGKVLRVVGM 144 (183)
T ss_dssp --HHHHHHHHHHHHTTCCTTCEEEEEEC
T ss_pred --HHHHHHHHHHHHcCCCHHHhheeEEe
Confidence 12246778888999999999 67764
No 350
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=34.85 E-value=2e+02 Score=24.10 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=63.6
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc-----------ccccEE-ecC-CCCCCcchhhhhhhc-----CC
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG-----------QLADVC-LDT-PLCNGHTTSMDVLWT-----GT 615 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~-----------~~~Di~-Ld~-~p~~g~~t~~eal~~-----Gv 615 (673)
......+.+.+...|.. .+|.... +..+-+..+ ...|++ +|- .|-..|..+++.+.. ++
T Consensus 14 ~~~~~~l~~~L~~~g~~-~~v~~~~--~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~ 90 (152)
T 3heb_A 14 LGHARLIEKNIRRAGVN-NEIIAFT--DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRS 90 (152)
T ss_dssp HHHHHHHHHHHHHTTCC-CCEEEES--SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTS
T ss_pred HHHHHHHHHHHHhCCCc-ceEEEeC--CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCC
Confidence 34466788889998874 3444432 234444433 457887 775 477778888887765 78
Q ss_pred ceeecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHh
Q psy17691 616 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 657 (673)
Q Consensus 616 Pvvt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~l 657 (673)
|||.+.+..-.... .-....|..+++.. +.++..+...++
T Consensus 91 pii~~t~~~~~~~~--~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 91 PVVILTTTDDQREI--QRCYDLGANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp CEEEEESCCCHHHH--HHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHH--HHHHHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 99998886544332 22335688887765 567776666555
No 351
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=33.73 E-value=22 Score=35.93 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=28.1
Q ss_pred ccccEEecCCCCCCcchhhhhhhcCCceeecCCCc
Q psy17691 590 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET 624 (673)
Q Consensus 590 ~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~ 624 (673)
..-|++|||| .+.|||...|+-+|.-.|.+.=+.
T Consensus 241 ~~~~~vlDpF-~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFF-AGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETT-CTTCHHHHHHHHHTCEEEEEESST
T ss_pred CCCCEEEecC-CCCCHHHHHHHHcCCcEEEEECCc
Confidence 4679999999 677999999999998888766544
No 352
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=33.45 E-value=77 Score=29.52 Aligned_cols=33 Identities=9% Similarity=-0.107 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy17691 151 DSLNNLANIKREQGYIEEATRLYLKALEVFPEF 183 (673)
Q Consensus 151 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~ 183 (673)
...+.+|.++..+++|.+|.+.+..|++..|..
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 456677777777777777777777777777655
No 353
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=33.11 E-value=1.8e+02 Score=25.95 Aligned_cols=57 Identities=5% Similarity=-0.099 Sum_probs=29.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHH------HHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 156 LANIKREQGYIEEATRLYLKALEVFPEF---AAAH------SNLASVLQQQGKLTDALLHYKEAIR 212 (673)
Q Consensus 156 Lg~~~~~~g~~~eA~~~~~~al~~~p~~---~~~~------~~la~~~~~~g~~~eA~~~~~~al~ 212 (673)
-|..++..|+|=+|-+.++.+....+.. ...| ...|....+.|+..-|...+.+++.
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4455556666666666666666554433 1111 1122233445666666666666654
No 354
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=32.82 E-value=4e+02 Score=26.85 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17691 182 EFAAAHSNLASVLQQQGKLTDALLHY 207 (673)
Q Consensus 182 ~~~~~~~~la~~~~~~g~~~eA~~~~ 207 (673)
.++..+..+|..|.+.+++.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 34555555555555555555555554
No 355
>2kgw_A Outer membrane protein A; OMPA-L membrane, transmembrane; NMR {Mycobacterium tuberculosis} PDB: 2lca_A 2lbt_A
Probab=32.66 E-value=63 Score=27.54 Aligned_cols=68 Identities=19% Similarity=0.155 Sum_probs=42.0
Q ss_pred cccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHH
Q psy17691 485 YKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQ 561 (673)
Q Consensus 485 ~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
.+++++ .++-++.+|+..|+..+.+.|+..... + ..-.|.+. ..--..+.
T Consensus 33 ~~l~~~~~~~L~~ia~~l~~~~~~~i~I~GhtD~~G----------------~---------~~~N~~LS--~~RA~aV~ 85 (129)
T 2kgw_A 33 ASLIPADYEILNRVADKLKACPDARVTINGYTDNTG----------------S---------EGINIPLS--AQRAKIVA 85 (129)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCTTSCEEEEECCCTTS----------------C---------HHHHHHHH--HHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHhCCCceEEEEEEeCCCC----------------C---------hHHHHHHH--HHHHHHHH
Confidence 345544 578888999999998888888431100 0 01112111 11124667
Q ss_pred HHHHHcCCCCCeEEeccC
Q psy17691 562 ATAQALGLDQHRILFSNV 579 (673)
Q Consensus 562 ~~~~~~g~~~~rv~~~~~ 579 (673)
+++.+.||+++||...|.
T Consensus 86 ~~L~~~Gi~~~ri~~~g~ 103 (129)
T 2kgw_A 86 DYLVARGVAGDHIATVGL 103 (129)
T ss_dssp HHHHHHTCCGGGEEEEEC
T ss_pred HHHHHcCCCHHHEEEEEE
Confidence 788889999999988764
No 356
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=32.21 E-value=1e+02 Score=32.65 Aligned_cols=105 Identities=8% Similarity=-0.048 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHHHhhCCCC----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--C--------CH
Q psy17691 165 YIEEATRLYLKALEVFPEF----------------AAAHSNLASVLQQQGKLTDALLHYKEAIRIQP--S--------FA 218 (673)
Q Consensus 165 ~~~eA~~~~~~al~~~p~~----------------~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p--~--------~~ 218 (673)
..+++...+.++....-++ ....+++-.+|++.++..-+...++..-...+ . -.
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 4566677777776652111 11234455778888988888877765433322 1 13
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC-----HH-----HHHHHHHHHHHcCCCc
Q psy17691 219 DAYSNMGNTLKEMQDIQGALQCYSRAIQI-NPGF-----AD-----AHSNLASIHKDSGKRG 269 (673)
Q Consensus 219 ~~~~~lg~~~~~~g~~~eA~~~~~~Al~l-~p~~-----~~-----a~~~La~~~~~~g~~~ 269 (673)
..++.+|.++...++|.+|.+++..|++. .|.. .. ++..|.-+..-+|++.
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLIpv~LLlG~~P 282 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMV 282 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 56788999999999999999999999998 6654 11 2223334445578765
No 357
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=31.79 E-value=88 Score=29.15 Aligned_cols=32 Identities=16% Similarity=-0.061 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy17691 220 AYSNMGNTLKEMQDIQGALQCYSRAIQINPGF 251 (673)
Q Consensus 220 ~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~ 251 (673)
.++.+|.++...++|.+|.+++.+|++..|..
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 34455555555555555555555555554443
No 358
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=31.62 E-value=57 Score=32.97 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=39.2
Q ss_pred hhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEE-ecCCCCCCcchhhhhhhcCCceee
Q psy17691 558 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC-LDTPLCNGHTTSMDVLWTGTPVVT 619 (673)
Q Consensus 558 ~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~-Ld~~p~~g~~t~~eal~~GvPvvt 619 (673)
++.++..+++|+. ++ ..+.++.++. ..+|++ +.|.+..-.-.+.+||-.|.+|++
T Consensus 60 ~~a~~~a~~~g~~--~~----y~d~~ell~~-~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 60 TRAREMADRFSVP--HA----FGSYEEMLAS-DVIDAVYIPLPTSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp HHHHHHHHHHTCS--EE----ESSHHHHHHC-SSCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCC--ee----eCCHHHHhcC-CCCCEEEEeCCCchhHHHHHHHHhcCCEEEE
Confidence 4556667788884 22 2356676653 468888 566666777788999999999987
No 359
>2oyy_A Hexameric cytochrome; all helical, unknown function; HET: HEM; 2.50A {Silicibacter pomeroyi}
Probab=31.29 E-value=50 Score=25.04 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=28.6
Q ss_pred CCCccccCCHHHHHHHHHHhcC--------CHHHHHHHHhh
Q psy17691 638 GCPELIARTHKEYQDIAIRLGT--------DRDYCEKALLY 670 (673)
Q Consensus 638 gl~~~ia~~~~~yv~~a~~la~--------d~~~~~~~~~~ 670 (673)
=||-|+.+|+++=.++||.|++ |.+.|.++|..
T Consensus 5 WLptL~T~TPeeG~~LAvklaR~~vk~tQPd~evr~~lR~~ 45 (76)
T 2oyy_A 5 WLPTLVTATPQEGFDLAVKLSRIAVKKTQPDAQVRDTLRAV 45 (76)
T ss_dssp CCCCSCCSSHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred hhhhhhcCChHHHHHHHHHHHHHHHhccCCCHHHHHHHhHH
Confidence 3688999999999999999986 88999998864
No 360
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=31.25 E-value=73 Score=25.64 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=11.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHH
Q psy17691 189 NLASVLQQQGKLTDALLHYKEA 210 (673)
Q Consensus 189 ~la~~~~~~g~~~eA~~~~~~a 210 (673)
..+..+...|+|++||++.+++
T Consensus 20 RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 20 RRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHhcCCHHHHHHHHHHH
Confidence 3444555555555555554444
No 361
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=30.99 E-value=1.8e+02 Score=25.99 Aligned_cols=60 Identities=8% Similarity=0.050 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HH---HHHH---HHHHHHHcCCHHHHHHHHHHHHHh
Q psy17691 188 SNLASVLQQQGKLTDALLHYKEAIRIQPSF---AD---AYSN---MGNTLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 188 ~~la~~~~~~g~~~eA~~~~~~al~~~p~~---~~---~~~~---lg~~~~~~g~~~eA~~~~~~Al~l 247 (673)
+.-+..+++.|+|=+|-+.++......+.. .. .+.. .|....+.|+...|...+++++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 456777888899999999999999886554 22 2233 333456689999999999999874
No 362
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=30.98 E-value=1.5e+02 Score=26.62 Aligned_cols=115 Identities=15% Similarity=0.068 Sum_probs=67.9
Q ss_pred hhhHHHHHHHcCCCCCeEEec--cCcCh--HHHHHhcc--cccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhH
Q psy17691 557 EANIQATAQALGLDQHRILFS--NVAAK--EEHVRRGQ--LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVA 630 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~--~~~~~--~~~~~~~~--~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~ 630 (673)
.+.....++.+|++-+ +.+. .+.|. .+|...++ .++|++--=.-.++...+=|-..-+|||.++-..-.-.--
T Consensus 19 ~~~a~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~ 97 (163)
T 3ors_A 19 MQESCNMLDYFEIPYE-KQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGI 97 (163)
T ss_dssp HHHHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTH
T ss_pred HHHHHHHHHHcCCCEE-EEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCH
Confidence 4556667899999744 4443 34442 35555443 3788877666677777777778889998775432211223
Q ss_pred HHHHHhcCCCccc-----cCC-----HHHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 631 ASQLATLGCPELI-----ART-----HKEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 631 ~~~l~~~gl~~~i-----a~~-----~~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
.++|..+.+|.-| +=+ -..+...-+--..|++.+++++.|-+
T Consensus 98 dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~ 149 (163)
T 3ors_A 98 DSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYES 149 (163)
T ss_dssp HHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4566666666543 222 22333333333468888888887653
No 363
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=30.79 E-value=2.7e+02 Score=28.95 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHH
Q psy17691 202 DALLHYKEAIRI-----QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQI------NPGFADAHSNL 258 (673)
Q Consensus 202 eA~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l------~p~~~~a~~~L 258 (673)
.++..|++|+.. ...+...|..+|-.+.+.+++.+|+.++.+|-.. ..++.+.|..+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 356677777764 3445677888999999999999999999887543 33445555444
No 364
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=30.73 E-value=2.3e+02 Score=25.63 Aligned_cols=115 Identities=13% Similarity=0.058 Sum_probs=68.0
Q ss_pred hhhHHHHHHHcCCCCCeEEec--cCcCh--HHHHHhc--ccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhH
Q psy17691 557 EANIQATAQALGLDQHRILFS--NVAAK--EEHVRRG--QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVA 630 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~--~~~~~--~~~~~~~--~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~ 630 (673)
.+.....++.+|++-+ +.+. .+.|. .+|...+ +.++|++--=--.++...+=|-..-+|||-++-..-.-.--
T Consensus 28 ~~~a~~~L~~~Gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~ 106 (174)
T 3kuu_A 28 MQFAADVLTTLNVPFH-VEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGV 106 (174)
T ss_dssp HHHHHHHHHHTTCCEE-EEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTH
T ss_pred HHHHHHHHHHcCCCEE-EEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCH
Confidence 4556667899999644 4443 34442 3454444 34788877666677777777888889998765432111123
Q ss_pred HHHHHhcCCCcc-----ccCCH-----HHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 631 ASQLATLGCPEL-----IARTH-----KEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 631 ~~~l~~~gl~~~-----ia~~~-----~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
.|+|..+.+|.- |+=+. ..+...-+--..|++.+++++.+-+
T Consensus 107 dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~~d~~l~~kl~~~r~ 158 (174)
T 3kuu_A 107 DSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQ 158 (174)
T ss_dssp HHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 456666655543 22231 3344433334579999888887753
No 365
>3td3_A Outer membrane protein OMP38; OMPA-like fold, cell-WALL attachment, peptidoglycan-binding, protein,peptide binding protein; 1.59A {Acinetobacter baumannii} PDB: 3td4_A* 3td5_A*
Probab=30.28 E-value=69 Score=26.95 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=39.2
Q ss_pred hhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHH-cC
Q psy17691 490 STLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQA-LG 568 (673)
Q Consensus 490 ~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 568 (673)
..++-++.+|+..|+..+.+.|+....+ +. .-.|.+. ..--..+.+++.+ .|
T Consensus 31 ~~L~~~a~~l~~~~~~~i~I~GhtD~~g----------------~~---------~~N~~LS--~~RA~aV~~~L~~~~G 83 (123)
T 3td3_A 31 PEIAKVAEKLSEYPNATARIEGHTDNTG----------------PR---------KLNERLS--LARANSVKSALVNEYN 83 (123)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEECCCSCS----------------CH---------HHHHHHH--HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCCceEEEEEEeCCCC----------------CH---------HHHHHHH--HHHHHHHHHHHHHhhC
Confidence 4477888889999999888888431110 00 1112111 1122466778887 79
Q ss_pred CCCCeEEeccC
Q psy17691 569 LDQHRILFSNV 579 (673)
Q Consensus 569 ~~~~rv~~~~~ 579 (673)
|+++||...|.
T Consensus 84 i~~~ri~~~g~ 94 (123)
T 3td3_A 84 VDASRLSTQGF 94 (123)
T ss_dssp CCGGGEEEEEC
T ss_pred CCHHHEEEEEE
Confidence 99999988764
No 366
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=29.52 E-value=1e+02 Score=32.77 Aligned_cols=87 Identities=10% Similarity=0.010 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHhCCCC----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--C--------CH
Q psy17691 131 QVSEAEECYNTALRLCPTH----------------ADSLNNLANIKREQGYIEEATRLYLKALEVFP--E--------FA 184 (673)
Q Consensus 131 ~~~~A~~~~~~al~~~p~~----------------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~p--~--------~~ 184 (673)
..+++...+.++....-++ .....++-.+|++.++..-+...++..-...+ . ..
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 5677888888888762211 01244566789999999999888865533322 1 14
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q psy17691 185 AAHSNLASVLQQQGKLTDALLHYKEAIRI-QPSF 217 (673)
Q Consensus 185 ~~~~~la~~~~~~g~~~eA~~~~~~al~~-~p~~ 217 (673)
..++.+|.++..+++|.+|.+++..|++. .|..
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 67889999999999999999999999998 6654
No 367
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=28.72 E-value=85 Score=28.24 Aligned_cols=83 Identities=16% Similarity=0.123 Sum_probs=49.6
Q ss_pred hhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHHcCC
Q psy17691 490 STLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALGL 569 (673)
Q Consensus 490 ~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 569 (673)
..++-++.+|+..|+.++.+.|+...-. + ..-.|.+ ...--..+.+++.+.||
T Consensus 71 ~~L~~la~~l~~~~~~~i~I~GhTD~~G----------------~---------~~~N~~L--S~~RA~aV~~~L~~~Gv 123 (169)
T 3ldt_A 71 PGLNNVIRLLNFYPQSTIYVAGFTDNVG----------------S---------RSHKRKL--SQAQAETMMTFLWANGI 123 (169)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEECTTSC----------------C---------C--CHHH--HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCeEEEEeEeCCCC----------------C---------HHHHHHH--HHHHHHHHHHHHHHcCC
Confidence 3578889999999998888887431110 0 0111211 11122467888999999
Q ss_pred CCCeEEeccCcCh--------HHHHHhcccccEEecCC
Q psy17691 570 DQHRILFSNVAAK--------EEHVRRGQLADVCLDTP 599 (673)
Q Consensus 570 ~~~rv~~~~~~~~--------~~~~~~~~~~Di~Ld~~ 599 (673)
+++||...|.-.. ++-.+.=+.++|.+.+.
T Consensus 124 ~~~ri~~~g~G~~~P~~~n~t~~~r~~NRRVei~~~~~ 161 (169)
T 3ldt_A 124 AAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTS 161 (169)
T ss_dssp CTTTEEECCTTCTTSCCCTTTSCGGGGTSEEEEEEECC
T ss_pred CHHHEEEEEECCcCCCCCCCChhHHHhcCcEEEEEecC
Confidence 9999988764211 12234456677776543
No 368
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=28.06 E-value=2.2e+02 Score=23.46 Aligned_cols=98 Identities=10% Similarity=0.034 Sum_probs=56.6
Q ss_pred hhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecC-CCCCCcchhhhhhhc--CCceeecCCCcchhh
Q psy17691 555 VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLWT--GTPVVTLPGETLASR 628 (673)
Q Consensus 555 ~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~-~p~~g~~t~~eal~~--GvPvvt~~g~~~~~r 628 (673)
.....+...+...|. +|.... +..+-+... ...|++ +|. .|-..|...++.+.. .+|||.+.+..-...
T Consensus 15 ~~~~~l~~~L~~~g~---~v~~~~--~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~ 89 (136)
T 2qzj_A 15 DNCQKLKGFLEEKGI---SIDLAY--NCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQS 89 (136)
T ss_dssp HHHHHHHHHHHTTTC---EEEEES--SHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHH
T ss_pred HHHHHHHHHHHHCCC---EEEEEC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHH
Confidence 345667777777665 243222 233333322 246877 775 365567777777653 689998877644332
Q ss_pred hHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 629 VAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 629 ~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
.. -.-..|..+++.. +.++..+...++..
T Consensus 90 ~~--~~~~~ga~~~l~KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 90 IL--NALNSGGDDYLIKPLNLEILYAKVKAILR 120 (136)
T ss_dssp HH--HHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HH--HHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 22 2234688887765 56776665554443
No 369
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=27.69 E-value=74 Score=31.48 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=35.0
Q ss_pred hhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCC-CCCCcchhhhhhhcCCceee
Q psy17691 558 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVT 619 (673)
Q Consensus 558 ~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~-p~~g~~t~~eal~~GvPvvt 619 (673)
+..++..++.|+.. ..+.++.+. .+|+++-+. +..-...+.+|+..|++|++
T Consensus 43 ~~~~~~a~~~~~~~-------~~~~~~ll~---~~D~V~i~tp~~~h~~~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 43 VKREKICSDYRIMP-------FDSIESLAK---KCDCIFLHSSTETHYEIIKILLNLGVHVYV 95 (308)
T ss_dssp HHHHHHHHHHTCCB-------CSCHHHHHT---TCSEEEECCCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCC-------cCCHHHHHh---cCCEEEEeCCcHhHHHHHHHHHHCCCcEEE
Confidence 34555566778741 234566666 799986554 44555667889999999886
No 370
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=27.58 E-value=2.4e+02 Score=22.77 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=59.6
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCc-ChHHHHHhcccccEE-ecC-CCCCCcchhhhhhhc-----CCceeecCCCcc
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVA-AKEEHVRRGQLADVC-LDT-PLCNGHTTSMDVLWT-----GTPVVTLPGETL 625 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~-~~~~~~~~~~~~Di~-Ld~-~p~~g~~t~~eal~~-----GvPvvt~~g~~~ 625 (673)
......++..+.+.|.. .+...... .--+.+......|++ +|- .|-..|...++.+.. .+|||.+.+..-
T Consensus 15 ~~~~~~l~~~L~~~g~~--~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (129)
T 3h1g_A 15 STMRRIIKNTLSRLGYE--DVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGG 92 (129)
T ss_dssp HHHHHHHHHHHHHTTCC--CEEEESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCS
T ss_pred HHHHHHHHHHHHHcCCc--EEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCC
Confidence 34466788888888863 23332211 111233333457888 574 487778888887753 689999887654
Q ss_pred hhhhHHHHHHhcCCCccccC--CHHHHHHHHHHh
Q psy17691 626 ASRVAASQLATLGCPELIAR--THKEYQDIAIRL 657 (673)
Q Consensus 626 ~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~l 657 (673)
.... .-....|..+++.. +.++..+..-++
T Consensus 93 ~~~~--~~~~~~g~~~~l~KP~~~~~L~~~l~~~ 124 (129)
T 3h1g_A 93 KAEV--ITALKAGVNNYIVKPFTPQVLKEKLEVV 124 (129)
T ss_dssp HHHH--HHHHHHTCCEEEESCCCHHHHHHHHHHH
T ss_pred hHHH--HHHHHcCccEEEeCCCCHHHHHHHHHHH
Confidence 3322 12235688887764 566666555443
No 371
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=27.10 E-value=89 Score=24.54 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=13.5
Q ss_pred HHHHcCCHHHHHHHHHHHHHh
Q psy17691 227 TLKEMQDIQGALQCYSRAIQI 247 (673)
Q Consensus 227 ~~~~~g~~~eA~~~~~~Al~l 247 (673)
-.-+.|++++|+.+|+++++.
T Consensus 28 e~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 28 KADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHH
Confidence 335567777777777766653
No 372
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=26.97 E-value=3.5e+02 Score=24.33 Aligned_cols=116 Identities=16% Similarity=0.040 Sum_probs=68.3
Q ss_pred hhhhHHHHHHHcCCCCCeEEec--cCcCh--HHHHHhcc--cccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhh
Q psy17691 556 GEANIQATAQALGLDQHRILFS--NVAAK--EEHVRRGQ--LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 629 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~--~~~~~--~~~~~~~~--~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~ 629 (673)
..+.....++.+|++-+ +.+. -+.|. .+|...+. .++|++--=--.++...+=|-..-+|||.++-..-.-.-
T Consensus 26 v~~~a~~~L~~~Gi~~d-v~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G 104 (170)
T 1xmp_A 26 TMKYACDILDELNIPYE-KKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNG 104 (170)
T ss_dssp HHHHHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTT
T ss_pred HHHHHHHHHHHcCCCEE-EEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCc
Confidence 34556667899999743 4443 34442 35555443 378887766666777777777788899877654321122
Q ss_pred HHHHHHhcCCCccc-----cCC-----HHHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 630 AASQLATLGCPELI-----ART-----HKEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 630 ~~~~l~~~gl~~~i-----a~~-----~~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
-.|+|..+.+|..| +-+ -..+...-+--..|++.+++++.|-+
T Consensus 105 ~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kl~~~r~ 157 (170)
T 1xmp_A 105 LDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRRE 157 (170)
T ss_dssp HHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 23566666555432 222 23344433334478998888887754
No 373
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=26.82 E-value=2.6e+02 Score=22.76 Aligned_cols=99 Identities=11% Similarity=0.162 Sum_probs=60.7
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHH---HHHhcccccEE-ecC-CCCCCcchhhhhhh----cCCceeecCCCc
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEE---HVRRGQLADVC-LDT-PLCNGHTTSMDVLW----TGTPVVTLPGET 624 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~---~~~~~~~~Di~-Ld~-~p~~g~~t~~eal~----~GvPvvt~~g~~ 624 (673)
......+...+.+.|.. |.... +..+ .+......|++ +|. .|-..|...++.+. ..+|||.+.+..
T Consensus 17 ~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~ 91 (136)
T 3hdv_A 17 AVNREALILYLKSRGID---AVGAD--GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDT 91 (136)
T ss_dssp HHHHHHHHHHHHHTTCC---EEEES--SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHHcCce---EEEeC--CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCC
Confidence 34466788888888863 33322 2233 33333337877 774 47777888887774 458999988865
Q ss_pred chhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 625 LASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
-..... -....|..+++.. +.++..+..-+...
T Consensus 92 ~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (136)
T 3hdv_A 92 DVEEAV--DVMHLGVVDFLLKPVDLGKLLELVNKELK 126 (136)
T ss_dssp CHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred ChHHHH--HHHhCCcceEEeCCCCHHHHHHHHHHHhc
Confidence 443222 2335688887765 56777766655544
No 374
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, ME palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=26.56 E-value=91 Score=27.30 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=50.4
Q ss_pred cccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHH
Q psy17691 485 YKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQ 561 (673)
Q Consensus 485 ~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
..++++ .++.++.+|+..|+..+.+.|+.... ++ ..-.|.+. ..--..+.
T Consensus 43 ~~L~~~~~~~L~~ia~~L~~~~~~~i~I~GhtD~~----------------G~---------~~~N~~LS--~~RA~aV~ 95 (149)
T 2k1s_A 43 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDST----------------GG---------HDLNMRLS--QQRADSVA 95 (149)
T ss_dssp SCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCT----------------TC---------HHHHHHHH--HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCceEEEEEEcCCC----------------CC---------hHHHHHHH--HHHHHHHH
Confidence 345554 57778888999999888888743110 00 01122211 11124567
Q ss_pred HHHHHcCCCCCeEEeccCcC--------hHHHHHhcccccEEecC
Q psy17691 562 ATAQALGLDQHRILFSNVAA--------KEEHVRRGQLADVCLDT 598 (673)
Q Consensus 562 ~~~~~~g~~~~rv~~~~~~~--------~~~~~~~~~~~Di~Ld~ 598 (673)
+++.+.||+++||...|.-. .++-.+.=+.++|.+-+
T Consensus 96 ~~L~~~Gv~~~ri~~~g~G~~~p~~~n~t~~~~~~NRRVei~i~~ 140 (149)
T 2k1s_A 96 SALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140 (149)
T ss_dssp HHHHHHTCCGGGEEEEECTTTCCSSCSSSHHHHHHHSEEEEEEEE
T ss_pred HHHHHcCCCHHHEEEEEEcCCCcCCCCcChhHHHhCCcEEEEEec
Confidence 78888999999998876421 12334444566666543
No 375
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.41 E-value=2.9e+02 Score=23.18 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=59.9
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcc--cccEE-ecC-CCCCCcchhhhhhh---cCCceeecCCCcch
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVLW---TGTPVVTLPGETLA 626 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~--~~Di~-Ld~-~p~~g~~t~~eal~---~GvPvvt~~g~~~~ 626 (673)
......+...+...|. +|... .+.++.+..+. ..|++ +|. .|-..|...++.+. -++|||.+.+..-.
T Consensus 13 ~~~~~~l~~~L~~~g~---~v~~~--~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~ 87 (155)
T 1qkk_A 13 RDLRKAMQQTLELAGF---TVSSF--ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDI 87 (155)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEE--SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGH
T ss_pred HHHHHHHHHHHHHcCc---EEEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCh
Confidence 3445677888888776 24432 33456665543 36777 774 35556777777664 48999998875443
Q ss_pred hhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 627 SRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 627 ~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
... .-....|..+++.. +.++..+..-++..
T Consensus 88 ~~~--~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 88 PMA--VQAIQDGAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp HHH--HHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHH--HHHHhcCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 322 22334788887764 56666555554443
No 376
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=26.31 E-value=4.9e+02 Score=25.83 Aligned_cols=27 Identities=15% Similarity=0.054 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17691 182 EFAAAHSNLASVLQQQGKLTDALLHYK 208 (673)
Q Consensus 182 ~~~~~~~~la~~~~~~g~~~eA~~~~~ 208 (673)
.++..+..+|..|.+.|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 456666666777666666666666653
No 377
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=26.19 E-value=55 Score=33.47 Aligned_cols=89 Identities=18% Similarity=0.133 Sum_probs=58.8
Q ss_pred CcccccChhhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHH
Q psy17691 482 NQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQ 561 (673)
Q Consensus 482 ~~~~K~~~~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
++..+.+-..+.....++...|++.|+-+. +...++.+
T Consensus 34 G~ig~~H~~a~~~~~~~~~~~~~~~lvav~------------------------------------------d~~~~~a~ 71 (393)
T 4fb5_A 34 GYMGKCHALAWNAVKTVFGDVERPRLVHLA------------------------------------------EANAGLAE 71 (393)
T ss_dssp SHHHHHHHHHHTTHHHHHCSSCCCEEEEEE------------------------------------------CC--TTHH
T ss_pred CHHHHHHHHHHHhhhhhhccCCCcEEEEEE------------------------------------------CCCHHHHH
Confidence 555565544455555667778888887443 11233456
Q ss_pred HHHHHcCCCCCeEEeccCcChHHHHHhcccccEE-ecCCCCCCcchhhhhhhcCCceee
Q psy17691 562 ATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC-LDTPLCNGHTTSMDVLWTGTPVVT 619 (673)
Q Consensus 562 ~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~-Ld~~p~~g~~t~~eal~~GvPvvt 619 (673)
+..+++|+. ++ ..+.++.++. ..+|++ +-|.+..-.-.+..||-.|.+|++
T Consensus 72 ~~a~~~g~~--~~----y~d~~ell~~-~~iDaV~IatP~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 72 ARAGEFGFE--KA----TADWRALIAD-PEVDVVSVTTPNQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp HHHHHHTCS--EE----ESCHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCC--ee----cCCHHHHhcC-CCCcEEEECCChHHHHHHHHHHHhcCCeEEE
Confidence 667778884 21 2345666653 458888 667777888889999999999987
No 378
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=25.59 E-value=1.5e+02 Score=24.78 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=42.7
Q ss_pred cccCh---hhHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHH
Q psy17691 485 YKIDP---STLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQ 561 (673)
Q Consensus 485 ~K~~~---~~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
.++++ ..++-++.+|+..|+.++.+.|+..... + ..-.|.+. ..--..+.
T Consensus 26 ~~L~~~~~~~L~~~a~~l~~~~~~~i~I~GhtD~~g----------------~---------~~~N~~LS--~~RA~aV~ 78 (123)
T 3oon_A 26 FQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFG----------------L---------EEEMHELS--EKRARAIG 78 (123)
T ss_dssp CCBCGGGHHHHHHHHHHHHHSCSCCEEEEECCCSCC----------------C---------HHHHHHHH--HHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCceEEEEEEeCCCC----------------C---------hHHHHHHH--HHHHHHHH
Confidence 34544 4578888889999998888888431100 0 01122211 11224677
Q ss_pred HHHHHcCCC-CCeEEeccC
Q psy17691 562 ATAQALGLD-QHRILFSNV 579 (673)
Q Consensus 562 ~~~~~~g~~-~~rv~~~~~ 579 (673)
+++.+.|++ ++||...|.
T Consensus 79 ~~L~~~Gv~~~~ri~~~g~ 97 (123)
T 3oon_A 79 NYLIKMKVKDKDQILFKGW 97 (123)
T ss_dssp HHHHHTTSSCGGGEEEEEC
T ss_pred HHHHHcCCCchHeEEEEEE
Confidence 889999999 899988764
No 379
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=25.39 E-value=4.3e+02 Score=32.07 Aligned_cols=52 Identities=13% Similarity=0.005 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy17691 214 QPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQINPGFADAHSNLASIHKDSG 266 (673)
Q Consensus 214 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~La~~~~~~g 266 (673)
++++..+......-....|+|-.|++++.+.++-.| ..+.+..++.++..+|
T Consensus 1280 d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1280 DANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGALG 1331 (1354)
T ss_dssp CTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHS
T ss_pred ccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHcC
Confidence 344444333333333468999999999999999887 4677777777776665
No 380
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=25.23 E-value=82 Score=24.74 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=13.1
Q ss_pred HHHcCCHHHHHHHHHHHHHh
Q psy17691 194 LQQQGKLTDALLHYKEAIRI 213 (673)
Q Consensus 194 ~~~~g~~~eA~~~~~~al~~ 213 (673)
.-+.|+|++|+.+|.++++.
T Consensus 29 ~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 29 ADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHH
Confidence 34567777777777766553
No 381
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=25.11 E-value=79 Score=27.30 Aligned_cols=70 Identities=13% Similarity=0.217 Sum_probs=41.5
Q ss_pred cChh---hHHHHHHHHhccc-CeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHH
Q psy17691 487 IDPS---TLQMWVNVLKAVP-NSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQA 562 (673)
Q Consensus 487 ~~~~---~~~~~~~il~~~p-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
++++ .++-.+++|+..| +..+.+.|+...... ....+ ...|.+. ..--..+.+
T Consensus 15 l~~~~~~~L~~ia~~l~~~p~~~~i~I~GhtD~~g~--~~~~~-------------------~~N~~LS--~~RA~aV~~ 71 (138)
T 3cyp_B 15 INQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPL--VKTRF-------------------KSHYELA--ANRAYRVMK 71 (138)
T ss_dssp CCHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCCCC------C-------------------CSHHHHH--HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCCcEEEEEEecCCCCc--ccccc-------------------hhHHHHH--HHHHHHHHH
Confidence 5554 4777888899999 888888884311100 00000 0022211 112246778
Q ss_pred HHHHcCCCCCeEEeccC
Q psy17691 563 TAQALGLDQHRILFSNV 579 (673)
Q Consensus 563 ~~~~~g~~~~rv~~~~~ 579 (673)
++...||+++||...|.
T Consensus 72 ~L~~~Gv~~~ri~~~g~ 88 (138)
T 3cyp_B 72 VLIQYGVNPNQLSFSSY 88 (138)
T ss_dssp HHHHTTCCGGGEEEEEC
T ss_pred HHHHcCCCHHHEEEEEE
Confidence 88889999999988764
No 382
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.09 E-value=2.9e+02 Score=22.75 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=59.9
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecC-CCCCCcchhhhhhhc-----CCceeecCCCc
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLWT-----GTPVVTLPGET 624 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~-~p~~g~~t~~eal~~-----GvPvvt~~g~~ 624 (673)
......+...+...|.. ..|.... +.++-+..+ ...|++ +|. .|-..|...++.+.. ++|||.+.+..
T Consensus 15 ~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 15 PDDIALIRRVLDRKDIH-CQLEFVD--NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEEEES--SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHHHHHHHHhcCCC-eeEEEEC--CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 34566788888888874 2333332 234444433 346777 775 466677788887764 79999998865
Q ss_pred chhhhHHHHHHhcCCCccccC---CHHHHHHHHHHh
Q psy17691 625 LASRVAASQLATLGCPELIAR---THKEYQDIAIRL 657 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia~---~~~~yv~~a~~l 657 (673)
-..... -....|..+++.. +.++..+...++
T Consensus 92 ~~~~~~--~~~~~ga~~~l~Kp~~~~~~l~~~i~~~ 125 (144)
T 3kht_A 92 SDDRAK--QCMAAGASSVVDKSSNNVTDFYGRIYAI 125 (144)
T ss_dssp CHHHHH--HHHHTTCSEEEECCTTSHHHHHHHHHHH
T ss_pred CHHHHH--HHHHcCCCEEEECCCCcHHHHHHHHHHH
Confidence 443322 2235788888765 455555544433
No 383
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=25.04 E-value=72 Score=33.22 Aligned_cols=107 Identities=15% Similarity=0.044 Sum_probs=66.2
Q ss_pred hhhhhhH-HHHHHHcCCCCCe-EEeccCcChHHHHHhcc------cccEEe-cCCCCCCcchhh--------hhhhc---
Q psy17691 554 AVGEANI-QATAQALGLDQHR-ILFSNVAAKEEHVRRGQ------LADVCL-DTPLCNGHTTSM--------DVLWT--- 613 (673)
Q Consensus 554 ~~~~~~~-~~~~~~~g~~~~r-v~~~~~~~~~~~~~~~~------~~Di~L-d~~p~~g~~t~~--------eal~~--- 613 (673)
+.+-..+ .+.+..+|..+.. +.+.|..+.+.+...++ .+|.+| ..| ||.|-| +|+.-
T Consensus 256 g~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~---ggi~~~~~vA~~i~~a~~~~~~ 332 (397)
T 3ufx_B 256 GAGLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIF---GGITRADEVAKGVIRALEEGLL 332 (397)
T ss_dssp SHHHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEE---EEEEESHHHHHHHHHHHTTTCC
T ss_pred CccHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECC---CCCCCHHHHHHHHHHHHHhhCC
Confidence 4443333 4678889987665 67777777777665543 456553 333 444433 33322
Q ss_pred CCceeecCCCcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHH
Q psy17691 614 GTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEK 666 (673)
Q Consensus 614 GvPvvt~~g~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~ 666 (673)
++|||++-..+ -..-+..+|+..|++ ...|.++=+++++++++-..+|++
T Consensus 333 ~kPvvv~~~G~-~~~~~~~~l~~~gip--~~~~~e~Aa~~~~~l~~~a~w~~~ 382 (397)
T 3ufx_B 333 TKPVVMRVAGT-AEEEAKKLLEGKPVY--MYPTSIEAAKVTVAMKGGAAWLEF 382 (397)
T ss_dssp CSCEEEEEEEE-CHHHHHHHTTTSSEE--ECSSHHHHHHHHHHSCCSCC----
T ss_pred CCcEEEEccCC-CHHHHHHHHHhCCCc--ccCCHHHHHHHHHHHHHHhHHhhC
Confidence 79988765444 334455677777754 367999999999999987777764
No 384
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=24.63 E-value=83 Score=27.94 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=0.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------------CCCCHHHHHHHHHHHH
Q psy17691 129 LIQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEV-------------FPEFAAAHSNLASVLQ 195 (673)
Q Consensus 129 ~g~~~~A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-------------~p~~~~~~~~la~~~~ 195 (673)
++....+...|+..++....+...-.-+-.+..-...+.+....+...++. ||....+|..++....
T Consensus 3 ~~~~~~~~~~fE~~i~~y~gdDPL~~w~~YI~W~e~~~P~g~~~l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~ 82 (152)
T 4a1g_A 3 MDTPENVLQMLEAHMQSYKGNDPLGEWERYIQWVEENFPENKEYLITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYNS 82 (152)
T ss_dssp -CHHHHHHHHHHHHTTSCCSSCHHHHHHHHHHHHHTTCSSCTHHHHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTBS
T ss_pred CchHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhcC
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17691 196 QQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYSRAIQIN 248 (673)
Q Consensus 196 ~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~l~ 248 (673)
. ...+-.|-..-.+.-..+..|...|..+...|++.+|.+.|+.+++..
T Consensus 83 d----p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 83 D----LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp C----HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred C----HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
No 385
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=24.49 E-value=2.5e+02 Score=21.76 Aligned_cols=90 Identities=12% Similarity=0.121 Sum_probs=53.1
Q ss_pred hhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecC-CCCCCcchhhhhhh-----cCCceeecCCCcc
Q psy17691 555 VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLW-----TGTPVVTLPGETL 625 (673)
Q Consensus 555 ~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~-~p~~g~~t~~eal~-----~GvPvvt~~g~~~ 625 (673)
.....+...+...|. +|.... +.++.+... ...|++ +|. .|-..|...++.+. .++|||.+.+..-
T Consensus 12 ~~~~~l~~~l~~~g~---~v~~~~--~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~ 86 (119)
T 2j48_A 12 EAATVVCEMLTAAGF---KVIWLV--DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPP 86 (119)
T ss_dssp HHHHHHHHHHHHTTC---EEEEES--CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCC
T ss_pred HHHHHHHHHHHhCCc---EEEEec--CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCC
Confidence 345677888888886 344333 233333322 236766 774 35556777888876 5789998877644
Q ss_pred hhhhHHHHHHhcCCCccccC--CHHHHHHHH
Q psy17691 626 ASRVAASQLATLGCPELIAR--THKEYQDIA 654 (673)
Q Consensus 626 ~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a 654 (673)
.. -....|..+++.. +.++..+..
T Consensus 87 ~~-----~~~~~g~~~~l~kp~~~~~l~~~l 112 (119)
T 2j48_A 87 VD-----PLLTAQASAILSKPLDPQLLLTTL 112 (119)
T ss_dssp SS-----HHHHHHCSEECSSCSTTHHHHHHH
T ss_pred ch-----hhhhcCHHHhccCCCCHHHHHHHH
Confidence 33 3345677776654 344544433
No 386
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.31 E-value=1.1e+02 Score=29.54 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=68.2
Q ss_pred ChhhhhhHHHHHHHcCCCCCeEEecc-CcChHHHHHhcc--cccEEecCCCCCCcchh----hhhhh-cC--CceeecCC
Q psy17691 553 PAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQ--LADVCLDTPLCNGHTTS----MDVLW-TG--TPVVTLPG 622 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~rv~~~~-~~~~~~~~~~~~--~~Di~Ld~~p~~g~~t~----~eal~-~G--vPvvt~~g 622 (673)
+..+...+...++..|. +|+.+| .+|.++...... .+|++.=|+--+.+.+. ++.|- .| +||+. -|
T Consensus 136 HdiG~~iva~~L~~~G~---~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~v-GG 211 (258)
T 2i2x_B 136 HDIGKNIVTALLRANGY---NVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFAC-GG 211 (258)
T ss_dssp CCHHHHHHHHHHHHTTC---EEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEE-ES
T ss_pred cHHHHHHHHHHHHHCCC---EEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEE-EC
Confidence 44566677778899998 477777 577888766554 67888555444444433 33331 33 55443 33
Q ss_pred CcchhhhHHHHHHhcCCCccccCCHHHHHHHHHHhcCCHHHHHHHHhh
Q psy17691 623 ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRDYCEKALLY 670 (673)
Q Consensus 623 ~~~~~r~~~~~l~~~gl~~~ia~~~~~yv~~a~~la~d~~~~~~~~~~ 670 (673)
..+.. .+-..+| .+..+.|..+=++.+.++....+..+++|..
T Consensus 212 ~~~~~----~~~~~ig-ad~~~~da~~av~~~~~l~~~~~~~~~~~~~ 254 (258)
T 2i2x_B 212 GAVNQ----DFVSQFA-LGVYGEEAADAPKIADAIIAGTTDVTELREK 254 (258)
T ss_dssp TTCCH----HHHHTST-TEEECSSTTHHHHHHHHHHTTCCCHHHHHHH
T ss_pred ccCCH----HHHHHcC-CeEEECCHHHHHHHHHHHHcchhhHHHHHHH
Confidence 33322 2345678 4666778888899999998776556666654
No 387
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=24.25 E-value=4.6e+02 Score=24.84 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHH-------------------------------------
Q psy17691 153 LNNLANIKREQGYIEEATRLYLKALEVFPEF-AAAHSNLASVL------------------------------------- 194 (673)
Q Consensus 153 ~~~Lg~~~~~~g~~~eA~~~~~~al~~~p~~-~~~~~~la~~~------------------------------------- 194 (673)
...++.+..+.++|++...+.+++.+.++.. .+=.+.++.+|
T Consensus 8 ~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i~~yr 87 (234)
T 2br9_A 8 LVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYR 87 (234)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Q ss_pred -----------------------------------------------------HHcCCHHHHHHHHHHHHHh--------
Q psy17691 195 -----------------------------------------------------QQQGKLTDALLHYKEAIRI-------- 213 (673)
Q Consensus 195 -----------------------------------------------------~~~g~~~eA~~~~~~al~~-------- 213 (673)
.+..-.+.|.+.|++|+++
T Consensus 88 ~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pt 167 (234)
T 2br9_A 88 QMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPT 167 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCC
Q ss_pred CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q psy17691 214 QPSFADAYSNMGNTLKE-MQDIQGALQCYSRAIQ 246 (673)
Q Consensus 214 ~p~~~~~~~~lg~~~~~-~g~~~eA~~~~~~Al~ 246 (673)
+|-.-....|.+..|+. +++.++|....++|+.
T Consensus 168 hPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 168 HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
No 388
>1r1m_A Outer membrane protein class 4; 1.90A {Neisseria meningitidis} SCOP: d.79.7.1
Probab=24.11 E-value=1.1e+02 Score=27.44 Aligned_cols=68 Identities=10% Similarity=0.016 Sum_probs=41.8
Q ss_pred cccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHH
Q psy17691 485 YKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQ 561 (673)
Q Consensus 485 ~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
.+++++ .++.++.+|+..|...+.+.|+...- ++ ..-.|.+. ..--..+.
T Consensus 24 a~L~~~~~~~L~~la~~L~~~~~~~I~I~GhTD~~----------------G~---------~~~N~~LS--~~RA~aV~ 76 (164)
T 1r1m_A 24 DSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFM----------------GS---------DKYNQALS--ERRAYVVA 76 (164)
T ss_dssp SCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECCSS----------------SC---------HHHHHHHH--HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCcEEEEEEEeCCC----------------CC---------hHHHHHHH--HHHHHHHH
Confidence 345554 47778888999888888887743110 00 01122221 11224677
Q ss_pred HHHHHcCCCCCeEEeccC
Q psy17691 562 ATAQALGLDQHRILFSNV 579 (673)
Q Consensus 562 ~~~~~~g~~~~rv~~~~~ 579 (673)
+++.+.||+++||...|.
T Consensus 77 ~~L~~~Gi~~~ri~~~G~ 94 (164)
T 1r1m_A 77 NNLVSNGVPVSRISAVGL 94 (164)
T ss_dssp HHHHHTTCCGGGEEEEEC
T ss_pred HHHHHcCCCHHHEEEEEE
Confidence 888899999999988764
No 389
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.97 E-value=3.2e+02 Score=22.85 Aligned_cols=103 Identities=9% Similarity=0.021 Sum_probs=59.0
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcc--cccEE-ecC-CCCCCcchhhhhhh---cCCceeecCCCcch
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVLW---TGTPVVTLPGETLA 626 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~--~~Di~-Ld~-~p~~g~~t~~eal~---~GvPvvt~~g~~~~ 626 (673)
......+...+...|. +|.... +..+-+..+. ..|++ +|. .|-..|...++.+. -.+|||.+.+..-.
T Consensus 17 ~~~~~~l~~~L~~~g~---~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 91 (154)
T 2rjn_A 17 QPILNSLKRLIKRLGC---NIITFT--SPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADA 91 (154)
T ss_dssp HHHHHHHHHHHHTTTC---EEEEES--CHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGH
T ss_pred HHHHHHHHHHHHHcCC---eEEEeC--CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCH
Confidence 3445677778887775 344332 3344444332 36887 674 46666777777764 47999998775432
Q ss_pred hhhHHHHHHhcC-CCccccC--CHHHHHHHHHHhcCCHHH
Q psy17691 627 SRVAASQLATLG-CPELIAR--THKEYQDIAIRLGTDRDY 663 (673)
Q Consensus 627 ~r~~~~~l~~~g-l~~~ia~--~~~~yv~~a~~la~d~~~ 663 (673)
... ...+ ..| ..+++.. +.++..+...++......
T Consensus 92 ~~~-~~~~-~~g~~~~~l~kP~~~~~L~~~i~~~~~~~~~ 129 (154)
T 2rjn_A 92 QAT-IDAV-NRGKISRFLLKPWEDEDVFKVVEKGLQLAFL 129 (154)
T ss_dssp HHH-HHHH-HTTCCSEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHH-hccchheeeeCCCCHHHHHHHHHHHHHHHHH
Confidence 211 1222 244 7777764 566666655555443333
No 390
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=23.80 E-value=2.9e+02 Score=22.31 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=60.6
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcc---------cccEE-ecC-CCCCCcchhhhhhh-----cCCce
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------LADVC-LDT-PLCNGHTTSMDVLW-----TGTPV 617 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~---------~~Di~-Ld~-~p~~g~~t~~eal~-----~GvPv 617 (673)
......+.+.+...|.. ..|.... +..+.+..+. ..|++ +|. .|-..|...++.+. .++||
T Consensus 12 ~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pi 88 (140)
T 1k68_A 12 KADIRLIQEALANSTVP-HEVVTVR--DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPV 88 (140)
T ss_dssp HHHHHHHHHHHHTCSSC-CEEEEEC--SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCE
T ss_pred HHHHHHHHHHHHhcCCC-ceEEEEC--CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccE
Confidence 34566788888888863 3444433 3345444433 57888 674 46666777777775 57899
Q ss_pred eecCCCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHh
Q psy17691 618 VTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 657 (673)
Q Consensus 618 vt~~g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~l 657 (673)
|.+.+..-..... -....|..+++.. +.++..+...++
T Consensus 89 i~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~l~~~i~~~ 128 (140)
T 1k68_A 89 VVLSTSINEDDIF--HSYDLHVNCYITKSANLSQLFQIVKGI 128 (140)
T ss_dssp EEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred EEEecCCcHHHHH--HHHHhchhheecCCCCHHHHHHHHHHH
Confidence 9988765433222 2235688887765 566666555444
No 391
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=23.78 E-value=5e+02 Score=25.07 Aligned_cols=43 Identities=9% Similarity=-0.103 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Q psy17691 119 TFSYIISVLLLIQVSEAEECYNTALRLCPTH-ADSLNNLANIKR 161 (673)
Q Consensus 119 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~Lg~~~~ 161 (673)
..+.+...-+.++|++...+++++.+.+++- .+=.+.|..+|.
T Consensus 34 lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYK 77 (261)
T 3ubw_A 34 LVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYK 77 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 3344455556899999999999999887653 455555655553
No 392
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=23.30 E-value=93 Score=24.36 Aligned_cols=9 Identities=22% Similarity=-0.433 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q psy17691 202 DALLHYKEA 210 (673)
Q Consensus 202 eA~~~~~~a 210 (673)
+|+.+.++|
T Consensus 10 ~Ai~lv~~A 18 (83)
T 2v6y_A 10 MARKYAILA 18 (83)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 393
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=23.06 E-value=4e+02 Score=24.04 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=65.9
Q ss_pred hhhhHHHHHHHcCCCCCeEEecc--CcCh--HHHHHhc--ccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhh
Q psy17691 556 GEANIQATAQALGLDQHRILFSN--VAAK--EEHVRRG--QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 629 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~~--~~~~--~~~~~~~--~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~ 629 (673)
..+.....++.+|++-+ +.+.+ +.|. .+|...+ +.++|++--=.-.++...+=|-..-+|||.++-..-.-.-
T Consensus 22 v~~~a~~~L~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G 100 (174)
T 3lp6_A 22 VMADAAAALAEFDIPAE-VRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDG 100 (174)
T ss_dssp HHHHHHHHHHHTTCCEE-EEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGG
T ss_pred HHHHHHHHHHHcCCCEE-EEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCC
Confidence 34556667889999643 44443 4432 3443333 4578887766667777777777788899877543221122
Q ss_pred HHHHHHhcCCCcc-----cc-CCH--HHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 630 AASQLATLGCPEL-----IA-RTH--KEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 630 ~~~~l~~~gl~~~-----ia-~~~--~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
-.++|..+.++.- |+ ++. ..+.+.-+--..|++.+++++.|-
T Consensus 101 ~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~kl~~~r 150 (174)
T 3lp6_A 101 LDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQ 150 (174)
T ss_dssp HHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3456666665543 21 122 233333333346888888888764
No 394
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=22.85 E-value=3.7e+02 Score=23.15 Aligned_cols=56 Identities=14% Similarity=0.204 Sum_probs=35.0
Q ss_pred HHHHHcCCCCCeEEeccC--c----C-hHHHHHhcccccEEecCCCCCCcchhhh-------hhhcCCceee
Q psy17691 562 ATAQALGLDQHRILFSNV--A----A-KEEHVRRGQLADVCLDTPLCNGHTTSMD-------VLWTGTPVVT 619 (673)
Q Consensus 562 ~~~~~~g~~~~rv~~~~~--~----~-~~~~~~~~~~~Di~Ld~~p~~g~~t~~e-------al~~GvPvvt 619 (673)
+++++.||+..+|..... . | --+.+.- +.+|+++.+..- +....-| |+-.|||++|
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~-~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNN-NTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCC-CGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCC-CCcCCccHHHHHHHHHHhCCCeEc
Confidence 456789998777765432 1 2 2344443 569999998632 2222233 7889999998
No 395
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.42 E-value=34 Score=28.54 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=45.3
Q ss_pred hhhHHHHHHHcCCCCCeEEeccCcChHHHHHhcccccEEecCCCCCCcchhhhhhhc--CCceeecCCCcch--hhhHHH
Q psy17691 557 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT--GTPVVTLPGETLA--SRVAAS 632 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~--GvPvvt~~g~~~~--~r~~~~ 632 (673)
...+++.++++|++. .+.-.+.. ++-......||+|=.....--..-++...- |+||+..+...+. .+-|..
T Consensus 23 v~km~~~a~~~gi~v-~i~a~~~~---~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~vI~~~~Yg~~~~~g~~ 98 (108)
T 3nbm_A 23 ANAINEGANLTEVRV-IANSGAYG---AHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSK 98 (108)
T ss_dssp HHHHHHHHHHHTCSE-EEEEEETT---SCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEECCHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHCCCce-EEEEcchH---HHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEEeCHHHhhhhhCCHHH
Confidence 457888899999962 22212222 233344678999766544444445555554 9999999887665 344444
Q ss_pred HHH
Q psy17691 633 QLA 635 (673)
Q Consensus 633 ~l~ 635 (673)
+|.
T Consensus 99 vl~ 101 (108)
T 3nbm_A 99 ALQ 101 (108)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 396
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=22.27 E-value=1e+02 Score=26.84 Aligned_cols=68 Identities=12% Similarity=0.139 Sum_probs=41.4
Q ss_pred cccChh---hHHHHHHHHhcc--cCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhh
Q psy17691 485 YKIDPS---TLQMWVNVLKAV--PNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEAN 559 (673)
Q Consensus 485 ~K~~~~---~~~~~~~il~~~--p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (673)
..++++ .++-++.+|+.. |+.++.+.|+....+ ..... |.+ ...--..
T Consensus 31 ~~l~~~~~~~L~~~a~~l~~~~~~~~~i~I~GhtD~~G----~~~~N---------------------~~L--S~~RA~a 83 (148)
T 4erh_A 31 STLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIG----SDAYN---------------------QGL--SEKRAQS 83 (148)
T ss_dssp CSBCHHHHHHHHHHHHHHTCCCTTTCEEEEEEECCTTC----TTCSS---------------------SSH--HHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHhcCCCCcEEEEEEECCCCC----CHHHH---------------------HHH--HHHHHHH
Confidence 345554 477778888887 788888888432110 00111 111 1112356
Q ss_pred HHHHHHHcCCCCCeEEeccC
Q psy17691 560 IQATAQALGLDQHRILFSNV 579 (673)
Q Consensus 560 ~~~~~~~~g~~~~rv~~~~~ 579 (673)
+.+++...||+++||...|.
T Consensus 84 V~~~L~~~Gv~~~ri~~~g~ 103 (148)
T 4erh_A 84 VVDYLISKGIPSDKISARGM 103 (148)
T ss_dssp HHHHHHTTTCCGGGEEEEEE
T ss_pred HHHHHHHcCCCHHHEEEEEE
Confidence 78889999999999988763
No 397
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=22.20 E-value=59 Score=32.19 Aligned_cols=35 Identities=20% Similarity=0.091 Sum_probs=28.6
Q ss_pred ccccEEecCCCCCCcchhhhhhhcCCceeecCCCcc
Q psy17691 590 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL 625 (673)
Q Consensus 590 ~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~ 625 (673)
..-|++||+| .+.|||+++|+-+|--++.+.-+.-
T Consensus 234 ~~~~~vlD~f-~GsGt~~~~a~~~g~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPF-AGTGTTLIAAARWGRRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETT-CTTTHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEECC-CCCCHHHHHHHHcCCeEEEEeCCHH
Confidence 4578999998 6778999999999998887765543
No 398
>2zov_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=22.01 E-value=1.2e+02 Score=28.46 Aligned_cols=79 Identities=16% Similarity=0.149 Sum_probs=44.3
Q ss_pred EEEecCCcccccChh---hHHHHHHHHhcccCeeEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccC
Q psy17691 476 IVYCNFNQLYKIDPS---TLQMWVNVLKAVPNSILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKF 552 (673)
Q Consensus 476 ~~~~~~~~~~K~~~~---~~~~~~~il~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (673)
+.|.+ ....+++. .++..+.+|...|+ .+.+.|++..-...... ...-.|.+..
T Consensus 73 v~F~~--gsa~L~~~~~~~L~~ia~~L~~~p~-~I~I~GHTD~~g~~~~~--------------------~~~~N~~LS~ 129 (210)
T 2zov_A 73 PMFKT--GSAEVEPYMRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGE--------------------KGYSNWELSA 129 (210)
T ss_dssp CSBCT--TSCCBCHHHHHHHHHHHHHHTTSCC-CEEEEEEEECSCCCSSC--------------------SSCCHHHHHH
T ss_pred eeeCC--CccccCHHHHHHHHHHHHHHHcCCC-eEEEEEEeCCCCCCCcc--------------------cccchHHHHH
Confidence 44543 33455554 47788888999999 67666643111000000 0012344321
Q ss_pred ChhhhhhHHHHHHHcCCCCCeE-EeccC
Q psy17691 553 PAVGEANIQATAQALGLDQHRI-LFSNV 579 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~g~~~~rv-~~~~~ 579 (673)
.--..+.+++...||+++|| ...|.
T Consensus 130 --~RA~aV~~~L~~~Gv~~~ri~~~~G~ 155 (210)
T 2zov_A 130 --DRANASRRELVAGGLDNGKVLRVVGM 155 (210)
T ss_dssp --HHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCHHHeeeEEEe
Confidence 12245777888899999999 57664
No 399
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.87 E-value=4.4e+02 Score=23.67 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=69.4
Q ss_pred hhhHHHHHHHcCCCCCeEEecc--CcCh--HHHHHhc--ccccEEecCCCCCCcchhhhhhhcCCceeecCCCcchhhhH
Q psy17691 557 EANIQATAQALGLDQHRILFSN--VAAK--EEHVRRG--QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVA 630 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~~--~~~~--~~~~~~~--~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g~~~~~r~~ 630 (673)
.+.....++.+|++-+ +.+.+ +.|. .+|...+ +.++|++--=.-.++...+=|-..-+|||.++-..-.-.--
T Consensus 22 ~~~a~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~ 100 (169)
T 3trh_A 22 METAFTELKSLGIPFE-AHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGL 100 (169)
T ss_dssp HHHHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTH
T ss_pred HHHHHHHHHHcCCCEE-EEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCH
Confidence 4556677889999644 44443 4432 2444333 45788887666677888888888889998876542211123
Q ss_pred HHHHHhcCCCcc-----ccCC-----HHHHHHHHHHhcCCHHHHHHHHhhhc
Q psy17691 631 ASQLATLGCPEL-----IART-----HKEYQDIAIRLGTDRDYCEKALLYHE 672 (673)
Q Consensus 631 ~~~l~~~gl~~~-----ia~~-----~~~yv~~a~~la~d~~~~~~~~~~~~ 672 (673)
.++|..+.+|.- |+-+ -..+...-+--..|++.+++++.+-+
T Consensus 101 dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~ 152 (169)
T 3trh_A 101 DALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQKLVQQRT 152 (169)
T ss_dssp HHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 456666655543 3333 23344444444578999888887753
No 400
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=21.76 E-value=99 Score=25.05 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=16.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy17691 155 NLANIKREQGYIEEATRLYLKALEVFPE 182 (673)
Q Consensus 155 ~Lg~~~~~~g~~~eA~~~~~~al~~~p~ 182 (673)
.+|..+...|+++.|+.+|-+|+...|.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 3566666666666666666666665544
No 401
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.75 E-value=2.3e+02 Score=28.86 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=33.7
Q ss_pred HHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17691 169 ATRLYLKALEV-----FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIR 212 (673)
Q Consensus 169 A~~~~~~al~~-----~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~ 212 (673)
++..|.+++.. ...+...|..+|-.+++.+++.+|++++..+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 66666666654 345567788889999999999999999877654
No 402
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=21.74 E-value=3.2e+02 Score=24.20 Aligned_cols=112 Identities=17% Similarity=0.231 Sum_probs=60.3
Q ss_pred hhhhHHHHHHHcCCCCCeEEec--cCcCh--HHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecCC-CcchhhhH
Q psy17691 556 GEANIQATAQALGLDQHRILFS--NVAAK--EEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVA 630 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~--~~~~~--~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~g-~~~~~r~~ 630 (673)
..+.....++.+|++- .+... .+.|. .+|...++. +|++--=.-.++...+=|-..-+|||.++- ..+-+ -
T Consensus 14 v~~~a~~~l~~~gi~~-dv~V~saHR~p~~~~~~~~~a~~-~ViIa~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G--~ 89 (157)
T 2ywx_A 14 IAEKAVNILKEFGVEF-EVRVASAHRTPELVEEIVKNSKA-DVFIAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDG--L 89 (157)
T ss_dssp HHHHHHHHHHHTTCCE-EEEECCTTTCHHHHHHHHHHCCC-SEEEEEEESSCCHHHHHHTTCSSCEEEEEECSSGGG--H
T ss_pred HHHHHHHHHHHcCCCe-EEEEEcccCCHHHHHHHHHhcCC-CEEEEEcCchhhhHHHHHhccCCCEEEecCCCccCc--H
Confidence 3445666788999963 34443 34442 355555555 787765555666666666667777776654 22222 2
Q ss_pred HHHHHhcCCCcc--cc----CCH--HHHHHHHHHhcCCHHHHHHHHhhh
Q psy17691 631 ASQLATLGCPEL--IA----RTH--KEYQDIAIRLGTDRDYCEKALLYH 671 (673)
Q Consensus 631 ~~~l~~~gl~~~--ia----~~~--~~yv~~a~~la~d~~~~~~~~~~~ 671 (673)
.|+|..+.+|.. |+ ++. ..+...-+--..|++.+++++.+-
T Consensus 90 daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~~d~~l~~kl~~~r 138 (157)
T 2ywx_A 90 DALLSSVQMPPGIPVATVGIDRGENAAILALEILALKDENIAKKLIEYR 138 (157)
T ss_dssp HHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 245554444322 11 122 233332222336777777777664
No 403
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=21.67 E-value=1.3e+02 Score=23.76 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=10.9
Q ss_pred HHcCCHHHHHHHHHHHHH
Q psy17691 229 KEMQDIQGALQCYSRAIQ 246 (673)
Q Consensus 229 ~~~g~~~eA~~~~~~Al~ 246 (673)
-..|++++|+.+|.++++
T Consensus 27 D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 455666666666666654
No 404
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=21.17 E-value=1.1e+02 Score=24.84 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=21.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 188 SNLASVLQQQGKLTDALLHYKEAIRIQPS 216 (673)
Q Consensus 188 ~~la~~~~~~g~~~eA~~~~~~al~~~p~ 216 (673)
..+|..+...|+++.|+.+|-+|+...|+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34677777777777777777777777665
No 405
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.01 E-value=2.8e+02 Score=22.72 Aligned_cols=99 Identities=15% Similarity=0.035 Sum_probs=59.3
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc----ccccEE-ecC-CCCCCcchhhhhhh---cCCceeecCCCc
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG----QLADVC-LDT-PLCNGHTTSMDVLW---TGTPVVTLPGET 624 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~----~~~Di~-Ld~-~p~~g~~t~~eal~---~GvPvvt~~g~~ 624 (673)
......+...+...|. +|.... +.++.+... ...|++ +|. .|-..|...++.+. -.+|||.+.+..
T Consensus 13 ~~~~~~l~~~l~~~g~---~v~~~~--~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 13 STILQNIKFLLEIDGN---EVLTAS--SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEES--SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCc---eEEEeC--CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3446678888888875 343322 234443333 357877 775 46666777776654 479999988765
Q ss_pred chhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 625 LASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 625 ~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
-.... .-....|..+++.. +.++..+...++.+
T Consensus 88 ~~~~~--~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 88 DLDNA--ILAMKEGAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp CHHHH--HHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CHHHH--HHHHHhCcceeEeCCCCHHHHHHHHHHHHH
Confidence 43322 22335688887765 56666666555543
No 406
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.85 E-value=85 Score=29.31 Aligned_cols=65 Identities=18% Similarity=0.182 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHcCCCCCeEEecc-CcChHHHHHhcccccEEecCCCCCCcchhhhhhhcCCceeecC
Q psy17691 556 GEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 621 (673)
Q Consensus 556 ~~~~~~~~~~~~g~~~~rv~~~~-~~~~~~~~~~~~~~Di~Ld~~p~~g~~t~~eal~~GvPvvt~~ 621 (673)
+...+.+.+++-|-..--=.|+| ..+... +..|..=|+.+=+=|-.-+....||-.+|+|||++.
T Consensus 76 ~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~-~~~~~~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~ 141 (202)
T 3j20_B 76 GQKPVKKFGEVTGARAIPGRFLPGTMTNPA-VKNFFEPDVLIVTDPRADHQAMREAVEIGIPIVALV 141 (202)
T ss_dssp THHHHHHHHHHHSCCCCCSSCCSSSSSCSS-SSSCCCCSEEEESCTTTSHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHCCceeCceecCCCcccHh-HHhccCCCeEEEeCCccchHHHHHHHHcCCCEEEEE
Confidence 34456666666664321112333 222111 334567777755556777889999999999999864
No 407
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=20.78 E-value=3.9e+02 Score=25.17 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17691 168 EATRLYLKALEV--FPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPS 216 (673)
Q Consensus 168 eA~~~~~~al~~--~p~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~ 216 (673)
++...|.-.... .-..+..|...|..+...|++.+|.+.|+.+++....
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 445555555443 3445666666677777777777777777777766543
No 408
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.69 E-value=3.5e+02 Score=22.07 Aligned_cols=99 Identities=6% Similarity=-0.021 Sum_probs=60.7
Q ss_pred hhhhhhHHHHHHH-cCCCCCeEEeccCcChHHHHHhccc---ccEE-ecC-CC-CCCcchhhhhhhc-----CCceeecC
Q psy17691 554 AVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQL---ADVC-LDT-PL-CNGHTTSMDVLWT-----GTPVVTLP 621 (673)
Q Consensus 554 ~~~~~~~~~~~~~-~g~~~~rv~~~~~~~~~~~~~~~~~---~Di~-Ld~-~p-~~g~~t~~eal~~-----GvPvvt~~ 621 (673)
......+...+.. .|. +|+.. .+..+.+..+.. .|++ +|- .| -..|...++.+.. ++|||.+.
T Consensus 14 ~~~~~~l~~~L~~~~~~---~v~~~--~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls 88 (140)
T 3lua_A 14 EYEREKTKIIFDNIGEY---DFIEV--ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIAT 88 (140)
T ss_dssp HHHHHHHHHHHHHHCCC---EEEEE--CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEE
T ss_pred HHHHHHHHHHHHhccCc---cEEEE--CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEe
Confidence 3445677888888 776 34422 234666665544 7888 664 35 4456667766544 89999998
Q ss_pred CCcchhhhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 622 GETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 622 g~~~~~r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
+..-..... -....|..+++.. +.++..+...++.+
T Consensus 89 ~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 89 KSDNPGYRH--AALKFKVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp SCCCHHHHH--HHHHSCCSEEEESSCCTTHHHHHHHHHHC
T ss_pred CCCCHHHHH--HHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 865443222 2235788887765 56666666555544
No 409
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=20.60 E-value=85 Score=29.64 Aligned_cols=97 Identities=11% Similarity=0.174 Sum_probs=55.4
Q ss_pred hhhHHHHHHHcCCCCCeEEeccCcC---hHHHHHhc--ccccEEecCCCCCCcchhhhhh-h-cCCceeecCCCcchhhh
Q psy17691 557 EANIQATAQALGLDQHRILFSNVAA---KEEHVRRG--QLADVCLDTPLCNGHTTSMDVL-W-TGTPVVTLPGETLASRV 629 (673)
Q Consensus 557 ~~~~~~~~~~~g~~~~rv~~~~~~~---~~~~~~~~--~~~Di~Ld~~p~~g~~t~~eal-~-~GvPvvt~~g~~~~~r~ 629 (673)
++.|.+.++++|+...++..--..+ ..+..... ...|+++-|.|-+ -...++.+ | .++++++ .|..
T Consensus 122 ~~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~-v~~~~~~~~~~~~~~~~a------IG~~ 194 (229)
T 3p9z_A 122 VSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSILIFTAISH-AKAFLHYFEFLENYTAIS------IGNT 194 (229)
T ss_dssp SSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSCCTTCEEEECSHHH-HHHHHHHSCCCTTCEEEE------SSHH
T ss_pred hHHHHHHHHHCCCeEEEEEEEEeeCCCccHHHHHHHhcCCCeEEEEECHHH-HHHHHHHhCcccCCEEEE------ECHH
Confidence 4567778888998766665443221 12223333 4567776554321 11122222 1 2344443 3477
Q ss_pred HHHHHHhcCCCccccC--CHHHHHHHHHHhcCC
Q psy17691 630 AASQLATLGCPELIAR--THKEYQDIAIRLGTD 660 (673)
Q Consensus 630 ~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~d 660 (673)
++.-++..|+.-.|+. |.++.++.+.+++.+
T Consensus 195 Ta~~l~~~G~~v~va~~~~~e~ll~~l~~l~~~ 227 (229)
T 3p9z_A 195 TALYLQEQGIPSYIAKKPSLEACLELALSLRIK 227 (229)
T ss_dssp HHHHHHHTTCCEEECSSSSHHHHHHHHHHTC--
T ss_pred HHHHHHHcCCCceeCCCCCHHHHHHHHHHHhhh
Confidence 7788888999755653 689999999888754
No 410
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=20.32 E-value=1.3e+02 Score=27.68 Aligned_cols=87 Identities=10% Similarity=0.132 Sum_probs=49.7
Q ss_pred hhHHHHHHHHhcccCe-eEEeeccCCcCCCCCCCCcccccCCCCccchhhhhccCchhhhhccCChhhhhhHHHHHHHcC
Q psy17691 490 STLQMWVNVLKAVPNS-ILWLLKFPAVGEANISRPLFRPRLRPSASTSIVLKAVPNSILWLLKFPAVGEANIQATAQALG 568 (673)
Q Consensus 490 ~~~~~~~~il~~~p~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 568 (673)
..++-.+.+|+..|+. ++.+.|+....+..- -...-.|.+. ..--..+.+++...|
T Consensus 76 ~~L~~ia~~l~~~~~~~~i~I~GhTD~~g~~~---------------------~~~~~N~~LS--~~RA~aV~~~L~~~G 132 (193)
T 3s0y_A 76 LYIERIAKIIQKLPKRVHINVRGFTDDTPLVK---------------------TRFKSHYELA--ANRAYRVMKVLIQYG 132 (193)
T ss_dssp HHHHHHHHHHHTSCTTCEEEEEECCCSCCCTT---------------------SSCSCHHHHH--HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCceEEEEEEEeCCCCCcc---------------------ccchhHHHHH--HHHHHHHHHHHHHcC
Confidence 4578888999999975 777777432111000 0011123221 112346778888999
Q ss_pred CCCCeEEeccCcC--------hHHHHHhcccccEEecCC
Q psy17691 569 LDQHRILFSNVAA--------KEEHVRRGQLADVCLDTP 599 (673)
Q Consensus 569 ~~~~rv~~~~~~~--------~~~~~~~~~~~Di~Ld~~ 599 (673)
|+++||...|.-. ..+-.+.=+.++|.+-+-
T Consensus 133 v~~~ri~~~g~G~~~P~~~n~t~~~r~~NRRVei~i~~~ 171 (193)
T 3s0y_A 133 VNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTD 171 (193)
T ss_dssp CCGGGEEEEECTTSCCSSCSCSHHHHHHHTCEEEEEECC
T ss_pred CCHHHEEEEEECCcCCCCCCcChhhHhhCCCEEEEEEcC
Confidence 9999998876421 123444455666665443
No 411
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=20.26 E-value=94 Score=24.23 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=30.0
Q ss_pred hhhhhhHHHHHHHcCCCCC---eEEecc-CcChHHHHHhcc-----cccEEec
Q psy17691 554 AVGEANIQATAQALGLDQH---RILFSN-VAAKEEHVRRGQ-----LADVCLD 597 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~---rv~~~~-~~~~~~~~~~~~-----~~Di~Ld 597 (673)
....+-+.+++.+.||+++ |+.|-| ++.+...++-|. ++|++||
T Consensus 30 t~v~kLi~ayc~~~~I~~~~~IrllFDGdRLdp~~tp~DlemeD~D~IDvmL~ 82 (82)
T 3goe_A 30 FTVKDLIKRYCTEVKISFHERIRLEFEGEWLDPNDQVQSTELEDEDQVSVVLD 82 (82)
T ss_dssp SBHHHHHHHHHHHHTCCCCTTCEEEETTEECCTTSBGGGSSCCTTCEEEEEC-
T ss_pred CCHHHHHHHHHHHcCCCcCceEEEEEcCcccCccCChhhhCCcCCceeeeeeC
Confidence 3445677889999999988 567777 566666666554 4555554
No 412
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.17 E-value=3.6e+02 Score=22.01 Aligned_cols=99 Identities=9% Similarity=0.088 Sum_probs=56.0
Q ss_pred hhhhhhHHHHHHHcCCCCCeEEeccCcChHHHHHhc--ccccEE-ecCCCCCCcchhhhhhh---cCCceeecCCCcchh
Q psy17691 554 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDTPLCNGHTTSMDVLW---TGTPVVTLPGETLAS 627 (673)
Q Consensus 554 ~~~~~~~~~~~~~~g~~~~rv~~~~~~~~~~~~~~~--~~~Di~-Ld~~p~~g~~t~~eal~---~GvPvvt~~g~~~~~ 627 (673)
......+...+...|. +|.... +..+-+..+ ...|++ +|..|-..|...++.+. .++|||.+.+..-..
T Consensus 14 ~~~~~~l~~~L~~~g~---~v~~~~--~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~ 88 (142)
T 2qxy_A 14 RITFLAVKNALEKDGF---NVIWAK--NEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKD 88 (142)
T ss_dssp HHHHHHHHHHHGGGTC---EEEEES--SHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHH
T ss_pred HHHHHHHHHHHHhCCC---EEEEEC--CHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCCCHH
Confidence 3445677788887776 344322 234444433 246777 67633223445555543 479999988765433
Q ss_pred hhHHHHHHhcCCCccccC--CHHHHHHHHHHhcC
Q psy17691 628 RVAASQLATLGCPELIAR--THKEYQDIAIRLGT 659 (673)
Q Consensus 628 r~~~~~l~~~gl~~~ia~--~~~~yv~~a~~la~ 659 (673)
.. .-....|..+++.. +.++..+...++..
T Consensus 89 ~~--~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 120 (142)
T 2qxy_A 89 LI--INSVKAGAVDYILKPFRLDYLLERVKKIIS 120 (142)
T ss_dssp HH--HHHHHHTCSCEEESSCCHHHHHHHHHHHHH
T ss_pred HH--HHHHHCCcceeEeCCCCHHHHHHHHHHHHh
Confidence 22 22335688887765 56776666555443
No 413
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=20.01 E-value=86 Score=28.24 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=24.3
Q ss_pred HHhcccccEEec--CCCCCCcchhhh---hhhcCCceeecC
Q psy17691 586 VRRGQLADVCLD--TPLCNGHTTSMD---VLWTGTPVVTLP 621 (673)
Q Consensus 586 ~~~~~~~Di~Ld--~~p~~g~~t~~e---al~~GvPvvt~~ 621 (673)
++.++.||+++- ..+..-.-|..| |.+.|.|||.+.
T Consensus 76 ~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 76 LTGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 456778999844 223334445555 788999999993
Done!