Query psy17692
Match_columns 211
No_of_seqs 263 out of 2133
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 20:32:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tl2_A Malate dehydrogenase; c 100.0 3.5E-31 1.2E-35 234.9 9.9 140 7-160 129-314 (315)
2 4aj2_A L-lactate dehydrogenase 100.0 5.7E-31 2E-35 235.1 10.1 139 9-160 140-329 (331)
3 3pqe_A L-LDH, L-lactate dehydr 100.0 4.9E-31 1.7E-35 235.0 8.6 139 8-160 125-313 (326)
4 3nep_X Malate dehydrogenase; h 100.0 4.2E-31 1.4E-35 234.4 7.9 145 8-166 121-310 (314)
5 2x0j_A Malate dehydrogenase; o 100.0 5.5E-31 1.9E-35 231.8 8.2 139 7-160 120-292 (294)
6 3vku_A L-LDH, L-lactate dehydr 100.0 5.6E-31 1.9E-35 234.7 8.1 140 9-162 129-318 (326)
7 1oju_A MDH, malate dehydrogena 100.0 5.9E-30 2E-34 225.1 9.7 139 7-161 120-293 (294)
8 3gvi_A Malate dehydrogenase; N 100.0 3.1E-30 1E-34 229.7 7.5 140 7-160 126-316 (324)
9 3p7m_A Malate dehydrogenase; p 100.0 2.4E-30 8.3E-35 230.0 6.5 141 7-161 124-316 (321)
10 7mdh_A Protein (malate dehydro 100.0 3.3E-30 1.1E-34 233.5 7.4 149 7-168 160-360 (375)
11 1o6z_A MDH, malate dehydrogena 99.9 1.2E-27 4.2E-32 210.3 9.9 135 8-158 122-300 (303)
12 1ez4_A Lactate dehydrogenase; 99.9 5.4E-28 1.8E-32 214.3 7.3 137 10-160 126-311 (318)
13 1ldn_A L-lactate dehydrogenase 99.9 1.6E-27 5.3E-32 210.8 10.0 139 7-159 125-313 (316)
14 2d4a_B Malate dehydrogenase; a 99.9 9E-28 3.1E-32 212.0 8.2 139 8-160 119-302 (308)
15 1ur5_A Malate dehydrogenase; o 99.9 1.4E-27 4.7E-32 210.5 8.8 140 7-160 121-306 (309)
16 3d0o_A L-LDH 1, L-lactate dehy 99.9 1.5E-27 5.2E-32 211.0 8.9 138 9-160 127-313 (317)
17 1y6j_A L-lactate dehydrogenase 99.9 3.3E-27 1.1E-31 209.0 10.5 139 8-160 126-315 (318)
18 2zqz_A L-LDH, L-lactate dehydr 99.9 2.3E-27 7.8E-32 211.1 8.9 142 9-164 129-320 (326)
19 3fi9_A Malate dehydrogenase; s 99.9 1.6E-27 5.4E-32 213.7 7.7 135 7-158 128-315 (343)
20 2xxj_A L-LDH, L-lactate dehydr 99.9 1.8E-27 6.3E-32 210.2 7.7 138 8-159 119-307 (310)
21 3ldh_A Lactate dehydrogenase; 99.9 7.6E-28 2.6E-32 214.9 4.9 147 8-160 141-328 (330)
22 1hye_A L-lactate/malate dehydr 99.9 1.1E-26 3.8E-31 204.9 11.0 140 7-160 124-310 (313)
23 5mdh_A Malate dehydrogenase; o 99.9 4.2E-27 1.4E-31 210.1 7.9 140 7-158 131-324 (333)
24 1guz_A Malate dehydrogenase; o 99.9 8.4E-27 2.9E-31 205.3 8.5 139 12-164 125-309 (310)
25 1t2d_A LDH-P, L-lactate dehydr 99.9 1.2E-26 4.1E-31 205.9 8.1 137 8-158 129-314 (322)
26 1pzg_A LDH, lactate dehydrogen 99.9 5.4E-26 1.9E-30 202.3 8.2 139 8-160 135-324 (331)
27 2hjr_A Malate dehydrogenase; m 99.9 7.4E-26 2.5E-30 201.2 8.7 140 7-160 133-323 (328)
28 4h7p_A Malate dehydrogenase; s 99.9 6.4E-26 2.2E-30 203.5 6.1 137 6-156 151-339 (345)
29 1a5z_A L-lactate dehydrogenase 99.9 7E-25 2.4E-29 193.7 10.4 135 12-160 123-307 (319)
30 2i6t_A Ubiquitin-conjugating e 99.9 5.8E-25 2E-29 193.8 9.7 149 8-160 128-301 (303)
31 3hhp_A Malate dehydrogenase; M 99.9 5.5E-24 1.9E-28 188.5 9.7 143 8-157 121-303 (312)
32 2v6b_A L-LDH, L-lactate dehydr 99.9 5.2E-24 1.8E-28 187.1 9.4 152 13-194 124-297 (304)
33 1b8p_A Protein (malate dehydro 99.9 3.5E-24 1.2E-28 190.1 6.7 135 11-160 139-324 (329)
34 1mld_A Malate dehydrogenase; o 99.9 4.8E-23 1.6E-27 182.0 9.4 148 4-158 110-304 (314)
35 2ewd_A Lactate dehydrogenase,; 99.9 5.5E-23 1.9E-27 180.9 8.2 139 7-159 123-312 (317)
36 1hyh_A L-hicdh, L-2-hydroxyiso 99.9 4.6E-22 1.6E-26 174.3 9.6 127 13-157 130-302 (309)
37 1smk_A Malate dehydrogenase, g 99.9 7.6E-22 2.6E-26 175.1 9.8 137 15-158 139-312 (326)
38 1y7t_A Malate dehydrogenase; N 99.7 2.1E-18 7E-23 152.0 8.7 131 13-158 138-319 (327)
39 1lld_A L-lactate dehydrogenase 99.7 1.1E-17 3.8E-22 145.8 10.5 135 12-160 131-317 (319)
40 1up7_A 6-phospho-beta-glucosid 99.6 2.2E-15 7.5E-20 138.1 7.7 144 4-155 134-370 (417)
41 1s6y_A 6-phospho-beta-glucosid 99.5 9.3E-15 3.2E-19 135.1 6.5 138 5-150 146-388 (450)
42 1u8x_X Maltose-6'-phosphate gl 99.4 1E-13 3.4E-18 128.9 7.3 138 5-150 165-412 (472)
43 2x0j_A Malate dehydrogenase; o 98.8 5.6E-11 1.9E-15 104.3 -5.6 157 14-194 101-287 (294)
44 3pqe_A L-LDH, L-lactate dehydr 98.7 1.7E-10 5.7E-15 102.5 -5.1 66 128-194 238-308 (326)
45 3vku_A L-LDH, L-lactate dehydr 98.7 1.7E-10 5.7E-15 102.6 -5.8 66 128-194 241-311 (326)
46 3tl2_A Malate dehydrogenase; c 98.7 2.5E-10 8.7E-15 100.8 -5.3 66 128-194 239-309 (315)
47 3gvi_A Malate dehydrogenase; N 98.7 2.7E-10 9.4E-15 101.0 -5.5 66 128-194 241-311 (324)
48 4aj2_A L-lactate dehydrogenase 98.7 4.2E-10 1.4E-14 100.1 -4.8 66 128-194 253-324 (331)
49 1oju_A MDH, malate dehydrogena 98.6 5.4E-10 1.8E-14 97.8 -5.6 65 128-194 218-287 (294)
50 3nep_X Malate dehydrogenase; h 98.6 5.3E-10 1.8E-14 98.8 -6.2 66 128-194 229-299 (314)
51 2v6b_A L-LDH, L-lactate dehydr 98.6 9.2E-10 3.1E-14 96.2 -5.4 57 99-160 245-302 (304)
52 3fef_A Putative glucosidase LP 98.5 2.5E-07 8.4E-12 85.5 9.3 57 92-148 333-391 (450)
53 3p7m_A Malate dehydrogenase; p 98.5 1.4E-09 4.9E-14 96.2 -5.5 65 128-194 239-310 (321)
54 1o6z_A MDH, malate dehydrogena 98.4 3.8E-09 1.3E-13 92.3 -5.1 66 128-194 227-297 (303)
55 1ur5_A Malate dehydrogenase; o 98.4 5.6E-09 1.9E-13 91.5 -5.5 66 128-194 231-301 (309)
56 1t2d_A LDH-P, L-lactate dehydr 98.4 6.4E-09 2.2E-13 91.8 -5.5 67 128-195 241-312 (322)
57 2xxj_A L-LDH, L-lactate dehydr 98.4 4.8E-09 1.7E-13 92.1 -6.3 66 128-194 233-303 (310)
58 1ez4_A Lactate dehydrogenase; 98.4 6.7E-09 2.3E-13 91.6 -5.5 67 128-195 236-307 (318)
59 3ldh_A Lactate dehydrogenase; 98.4 3E-09 1E-13 94.7 -7.7 64 129-194 252-323 (330)
60 1guz_A Malate dehydrogenase; o 98.4 6.6E-09 2.3E-13 90.9 -5.5 66 128-194 230-300 (310)
61 2d4a_B Malate dehydrogenase; a 98.4 6.7E-09 2.3E-13 91.2 -5.5 66 128-194 227-297 (308)
62 1ldn_A L-lactate dehydrogenase 98.4 5.6E-09 1.9E-13 91.8 -6.0 66 128-194 239-309 (316)
63 3d0o_A L-LDH 1, L-lactate dehy 98.4 7.4E-09 2.5E-13 91.1 -5.5 66 128-194 238-308 (317)
64 1y6j_A L-lactate dehydrogenase 98.3 6E-09 2.1E-13 91.8 -6.2 66 128-194 240-310 (318)
65 1a5z_A L-lactate dehydrogenase 98.3 7E-09 2.4E-13 91.1 -5.8 66 128-194 232-302 (319)
66 3fi9_A Malate dehydrogenase; s 98.3 7.3E-09 2.5E-13 92.6 -5.9 65 128-194 242-312 (343)
67 3hhp_A Malate dehydrogenase; M 98.3 7.4E-09 2.5E-13 91.3 -5.8 66 128-194 229-301 (312)
68 1pzg_A LDH, lactate dehydrogen 98.3 9.6E-09 3.3E-13 90.9 -5.5 66 128-194 249-319 (331)
69 2zqz_A L-LDH, L-lactate dehydr 98.3 9.6E-09 3.3E-13 90.9 -5.5 67 128-195 241-312 (326)
70 1hye_A L-lactate/malate dehydr 98.3 8.9E-09 3E-13 90.3 -5.9 66 128-194 234-305 (313)
71 2hjr_A Malate dehydrogenase; m 98.3 1.3E-08 4.4E-13 90.0 -5.5 67 128-195 248-319 (328)
72 2i6t_A Ubiquitin-conjugating e 98.3 8.5E-09 2.9E-13 90.5 -6.8 66 128-194 224-296 (303)
73 1hyh_A L-hicdh, L-2-hydroxyiso 98.3 1.6E-08 5.6E-13 88.0 -5.5 65 128-194 234-300 (309)
74 2ewd_A Lactate dehydrogenase,; 98.2 1.7E-08 5.8E-13 88.3 -5.8 66 128-194 238-308 (317)
75 7mdh_A Protein (malate dehydro 98.2 1E-07 3.5E-12 86.2 -2.8 64 130-194 271-347 (375)
76 1y7t_A Malate dehydrogenase; N 98.1 9.3E-08 3.2E-12 83.7 -4.5 65 129-194 244-316 (327)
77 5mdh_A Malate dehydrogenase; o 98.0 7.1E-07 2.4E-11 79.2 -0.1 65 129-194 248-321 (333)
78 1b8p_A Protein (malate dehydro 97.9 4.8E-07 1.7E-11 79.7 -3.6 65 129-194 248-319 (329)
79 1mld_A Malate dehydrogenase; o 97.7 1.8E-05 6.1E-10 69.4 4.1 67 128-194 229-301 (314)
80 1smk_A Malate dehydrogenase, g 97.6 3E-05 1E-09 68.2 4.1 66 128-194 237-309 (326)
81 1up7_A 6-phospho-beta-glucosid 97.4 6.8E-06 2.3E-10 75.1 -3.3 65 128-193 298-369 (417)
82 1s6y_A 6-phospho-beta-glucosid 97.4 2.7E-06 9.2E-11 78.4 -6.2 63 128-191 321-390 (450)
83 1lld_A L-lactate dehydrogenase 97.3 0.00012 4.2E-09 63.0 3.4 36 159-194 277-312 (319)
84 1u8x_X Maltose-6'-phosphate gl 96.7 3.2E-05 1.1E-09 71.7 -6.0 61 128-189 345-412 (472)
85 4h7p_A Malate dehydrogenase; s 96.3 0.00078 2.7E-08 60.0 0.8 66 128-194 264-338 (345)
86 1obb_A Maltase, alpha-glucosid 95.1 0.0067 2.3E-07 56.3 1.8 43 5-57 146-194 (480)
87 3fef_A Putative glucosidase LP 93.7 0.0024 8.2E-08 58.8 -4.5 61 128-189 326-393 (450)
88 1znf_A 31ST zinc finger from X 77.4 0.55 1.9E-05 23.9 0.3 12 198-209 2-13 (27)
89 2lvu_A Zinc finger and BTB dom 79.0 0.47 1.6E-05 24.1 0.0 11 199-209 4-14 (26)
90 2lvt_A Zinc finger and BTB dom 76.2 0.65 2.2E-05 24.1 0.0 12 198-209 3-14 (29)
91 2kvg_A Zinc finger and BTB dom 73.5 0.65 2.2E-05 24.0 -0.1 12 198-209 4-15 (27)
92 2kvh_A Zinc finger and BTB dom 73.4 0.71 2.4E-05 23.6 0.1 12 198-209 4-15 (27)
93 2kvf_A Zinc finger and BTB dom 73.0 0.74 2.5E-05 23.6 0.1 12 198-209 4-15 (28)
94 1ard_A Yeast transcription fac 71.9 0.81 2.8E-05 23.5 0.1 12 198-209 3-14 (29)
95 2m0e_A Zinc finger and BTB dom 71.4 1 3.5E-05 22.9 0.4 12 198-209 3-14 (29)
96 2m0d_A Zinc finger and BTB dom 70.0 0.85 2.9E-05 23.4 -0.2 12 198-209 4-15 (30)
97 1klr_A Zinc finger Y-chromosom 69.8 0.8 2.7E-05 23.5 -0.3 12 198-209 3-14 (30)
98 2m0f_A Zinc finger and BTB dom 69.5 0.88 3E-05 23.2 -0.2 11 199-209 4-14 (29)
99 2lvr_A Zinc finger and BTB dom 71.9 1 3.4E-05 23.3 0.0 11 199-209 5-15 (30)
100 1p7a_A BF3, BKLF, kruppel-like 68.7 1 3.5E-05 24.8 -0.0 12 198-209 12-23 (37)
101 2kfq_A FP1; protein, de novo p 68.5 0.99 3.4E-05 24.4 -0.1 11 198-208 3-13 (32)
102 1rik_A E6APC1 peptide; E6-bind 68.0 1.1 3.8E-05 23.0 0.1 11 199-209 4-14 (29)
103 1srk_A Zinc finger protein ZFP 68.0 1.1 3.8E-05 24.3 0.1 12 198-209 8-19 (35)
104 1rim_A E6APC2 peptide; E6-bind 67.7 1.2 4E-05 24.3 0.1 11 199-209 4-14 (33)
105 2elx_A Zinc finger protein 406 67.7 1.1 3.9E-05 24.1 0.1 12 198-209 8-19 (35)
106 2elo_A Zinc finger protein 406 67.6 1.1 3.6E-05 24.8 -0.1 12 198-209 10-21 (37)
107 1paa_A Yeast transcription fac 67.4 1.2 4E-05 23.1 0.1 12 198-209 3-14 (30)
108 2elv_A Zinc finger protein 406 67.4 1.2 4E-05 24.5 0.1 12 198-209 10-21 (36)
109 2elr_A Zinc finger protein 406 66.7 1.2 4.2E-05 24.2 0.1 12 198-209 10-21 (36)
110 2elp_A Zinc finger protein 406 65.8 1.3 4.5E-05 24.4 0.1 12 198-209 10-21 (37)
111 1obb_A Maltase, alpha-glucosid 65.8 10 0.00035 34.8 6.2 54 92-146 361-417 (480)
112 2els_A Zinc finger protein 406 64.8 1.2 4.3E-05 24.3 -0.2 12 198-209 10-21 (36)
113 2elm_A Zinc finger protein 406 64.2 1.4 4.8E-05 24.5 0.0 12 198-209 10-21 (37)
114 2elt_A Zinc finger protein 406 63.7 1.5 5.2E-05 23.8 0.1 12 198-209 10-21 (36)
115 3iuf_A Zinc finger protein UBI 63.6 1.4 4.6E-05 26.5 -0.2 11 199-209 9-19 (48)
116 2elq_A Zinc finger protein 406 62.1 1.7 5.7E-05 23.8 0.1 12 198-209 10-21 (36)
117 1njq_A Superman protein; zinc- 61.3 1.6 5.4E-05 24.5 -0.2 12 198-209 7-18 (39)
118 2jsp_A Transcriptional regulat 60.2 2.1 7.1E-05 30.7 0.3 15 195-209 19-33 (87)
119 2epv_A Zinc finger protein 268 60.0 1.9 6.6E-05 24.9 0.1 12 198-209 13-24 (44)
120 3u95_A Glycoside hydrolase, fa 59.8 8.7 0.0003 35.1 4.5 43 92-134 351-395 (477)
121 1fv5_A First zinc finger of U- 57.7 2.1 7.1E-05 25.0 -0.1 12 198-209 9-20 (36)
122 2epc_A Zinc finger protein 32; 57.5 2.2 7.7E-05 24.1 0.1 12 198-209 12-23 (42)
123 2enf_A Zinc finger protein 347 57.4 2.5 8.6E-05 24.5 0.3 12 198-209 13-24 (46)
124 2emi_A Zinc finger protein 484 57.0 2.3 7.9E-05 24.7 0.1 12 198-209 13-24 (46)
125 2em3_A Zinc finger protein 28 57.0 2.3 7.9E-05 24.7 0.1 12 198-209 13-24 (46)
126 2yte_A Zinc finger protein 473 56.9 2.3 8E-05 24.0 0.1 12 198-209 11-22 (42)
127 2eq2_A Zinc finger protein 347 56.7 2.5 8.6E-05 24.5 0.2 12 198-209 13-24 (46)
128 2eox_A Zinc finger protein 473 56.6 2.2 7.5E-05 24.5 -0.1 12 198-209 13-24 (44)
129 2em6_A Zinc finger protein 224 56.3 2.7 9.2E-05 24.4 0.3 12 198-209 13-24 (46)
130 2yu5_A Zinc finger protein 473 56.3 2.4 8.3E-05 24.3 0.1 12 198-209 13-24 (44)
131 2eoj_A Zinc finger protein 268 56.2 2.3 7.8E-05 24.4 -0.1 12 198-209 13-24 (44)
132 2el5_A Zinc finger protein 268 56.0 2.5 8.4E-05 23.9 0.1 12 198-209 11-22 (42)
133 2ytp_A Zinc finger protein 484 55.8 2.5 8.5E-05 24.6 0.1 12 198-209 13-24 (46)
134 2eon_A ZFP-95, zinc finger pro 55.8 2.8 9.5E-05 24.4 0.3 12 198-209 13-24 (46)
135 2epu_A Zinc finger protein 32; 55.7 2.3 8E-05 24.6 -0.1 12 198-209 13-24 (45)
136 2enh_A Zinc finger protein 28 55.7 2.5 8.6E-05 24.6 0.1 12 198-209 13-24 (46)
137 2eos_A B-cell lymphoma 6 prote 55.5 2.7 9.3E-05 23.8 0.2 12 198-209 12-23 (42)
138 2emg_A Zinc finger protein 484 55.4 2.5 8.7E-05 24.5 0.1 12 198-209 13-24 (46)
139 2eof_A Zinc finger protein 268 55.3 2.3 7.9E-05 24.3 -0.2 12 198-209 13-24 (44)
140 2yts_A Zinc finger protein 484 55.3 2.6 8.8E-05 24.4 0.1 12 198-209 13-24 (46)
141 2em4_A Zinc finger protein 28 55.3 2.6 8.8E-05 24.5 0.1 12 198-209 13-24 (46)
142 2emj_A Zinc finger protein 28 55.2 2.6 8.8E-05 24.5 0.1 12 198-209 13-24 (46)
143 2eoz_A Zinc finger protein 473 55.2 2.4 8.2E-05 24.7 -0.1 12 198-209 13-24 (46)
144 2yti_A Zinc finger protein 347 55.0 2.7 9.2E-05 24.4 0.1 12 198-209 13-24 (46)
145 2en7_A Zinc finger protein 268 55.0 2.4 8.3E-05 24.2 -0.1 12 198-209 13-24 (44)
146 2en9_A Zinc finger protein 28 54.9 2.6 9E-05 24.5 0.1 12 198-209 13-24 (46)
147 2eoh_A Zinc finger protein 28 54.8 2.7 9.3E-05 24.4 0.1 12 198-209 13-24 (46)
148 2en2_A B-cell lymphoma 6 prote 54.6 2.4 8.2E-05 24.0 -0.2 12 198-209 12-23 (42)
149 2ept_A Zinc finger protein 32; 54.5 2.7 9.2E-05 23.7 0.1 12 198-209 11-22 (41)
150 2ytb_A Zinc finger protein 32; 54.4 2.6 8.9E-05 23.8 -0.0 12 198-209 12-23 (42)
151 2ep1_A Zinc finger protein 484 53.9 2.9 9.8E-05 24.2 0.1 12 198-209 13-24 (46)
152 2eoy_A Zinc finger protein 473 53.7 2.8 9.7E-05 24.3 0.1 12 198-209 13-24 (46)
153 2yrj_A Zinc finger protein 473 53.6 2.8 9.7E-05 24.2 0.1 12 198-209 13-24 (46)
154 2eou_A Zinc finger protein 473 53.5 2.6 9E-05 24.2 -0.1 12 198-209 13-24 (44)
155 2eor_A Zinc finger protein 224 53.3 2.6 8.9E-05 24.4 -0.2 12 198-209 13-24 (46)
156 2eq3_A Zinc finger protein 347 53.1 2.7 9.4E-05 24.3 -0.1 12 198-209 13-24 (46)
157 2eq1_A Zinc finger protein 347 52.7 2.8 9.5E-05 24.3 -0.1 12 198-209 13-24 (46)
158 2ely_A Zinc finger protein 224 52.6 3.7 0.00013 23.8 0.5 12 198-209 13-24 (46)
159 2ytf_A Zinc finger protein 268 52.6 3 0.0001 24.1 0.1 12 198-209 13-24 (46)
160 2yto_A Zinc finger protein 484 52.4 3.1 0.0001 24.2 0.1 12 198-209 13-24 (46)
161 2eom_A ZFP-95, zinc finger pro 52.3 3.1 0.00011 24.2 0.1 12 198-209 13-24 (46)
162 2emb_A Zinc finger protein 473 52.1 2.8 9.6E-05 24.0 -0.2 12 198-209 13-24 (44)
163 2emx_A Zinc finger protein 268 51.6 3.2 0.00011 23.8 0.1 12 198-209 11-22 (44)
164 2emy_A Zinc finger protein 268 51.6 3.2 0.00011 24.0 0.1 12 198-209 13-24 (46)
165 2yth_A Zinc finger protein 224 51.5 3.5 0.00012 23.9 0.2 12 198-209 13-24 (46)
166 2emk_A Zinc finger protein 28 51.5 3.6 0.00012 23.9 0.3 12 198-209 13-24 (46)
167 2yrm_A B-cell lymphoma 6 prote 51.4 3.5 0.00012 23.7 0.2 12 198-209 11-22 (43)
168 2emz_A ZFP-95, zinc finger pro 51.3 3.3 0.00011 24.0 0.1 12 198-209 13-24 (46)
169 1yui_A GAGA-factor; complex (D 51.1 3 0.0001 25.4 -0.2 12 198-209 25-36 (54)
170 2eow_A Zinc finger protein 347 51.1 2.9 0.0001 24.1 -0.2 12 198-209 13-24 (46)
171 2ep3_A Zinc finger protein 484 51.1 3.3 0.00011 24.0 0.1 12 198-209 13-24 (46)
172 2em0_A Zinc finger protein 224 51.0 3.4 0.00012 23.9 0.1 12 198-209 13-24 (46)
173 2eov_A Zinc finger protein 484 50.9 3.7 0.00013 23.7 0.3 12 198-209 13-24 (46)
174 2en3_A ZFP-95, zinc finger pro 50.9 3.3 0.00011 23.9 0.1 12 198-209 13-24 (46)
175 2gmg_A Hypothetical protein PF 50.8 9 0.00031 28.2 2.4 31 177-207 39-77 (105)
176 2em7_A Zinc finger protein 224 50.5 3.4 0.00012 23.9 0.1 12 198-209 13-24 (46)
177 2em2_A Zinc finger protein 28 50.2 3.5 0.00012 23.9 0.1 12 198-209 13-24 (46)
178 2epx_A Zinc finger protein 28 50.1 3.8 0.00013 23.7 0.2 12 198-209 13-24 (47)
179 2emf_A Zinc finger protein 484 49.9 3.5 0.00012 23.9 0.1 12 198-209 13-24 (46)
180 2eml_A Zinc finger protein 28 49.7 3.6 0.00012 23.8 0.1 12 198-209 13-24 (46)
181 2elz_A Zinc finger protein 224 49.6 4 0.00014 23.6 0.3 12 198-209 13-24 (46)
182 2ene_A Zinc finger protein 347 49.6 3.6 0.00012 23.8 0.1 12 198-209 13-24 (46)
183 2em5_A ZFP-95, zinc finger pro 49.4 3.6 0.00012 23.8 0.1 12 198-209 13-24 (46)
184 2eoo_A ZFP-95, zinc finger pro 49.4 3.6 0.00012 23.8 0.1 12 198-209 13-24 (46)
185 2eoq_A Zinc finger protein 224 49.3 3.8 0.00013 23.7 0.1 12 198-209 13-24 (46)
186 2ytq_A Zinc finger protein 268 49.2 4.1 0.00014 23.6 0.3 12 198-209 13-24 (46)
187 2ytr_A Zinc finger protein 347 49.2 3.4 0.00012 23.8 -0.1 12 198-209 13-24 (46)
188 2eop_A Zinc finger protein 268 49.1 3.7 0.00013 23.7 0.1 12 198-209 13-24 (46)
189 2epw_A Zinc finger protein 268 49.1 3.7 0.00013 23.7 0.1 12 198-209 13-24 (46)
190 2em8_A Zinc finger protein 224 48.9 3.7 0.00013 23.8 0.1 12 198-209 13-24 (46)
191 2ytm_A Zinc finger protein 28 48.8 3.7 0.00013 23.9 0.0 12 198-209 13-24 (46)
192 2eoe_A Zinc finger protein 347 48.7 3.5 0.00012 23.7 -0.1 12 198-209 13-24 (46)
193 2ytt_A Zinc finger protein 473 48.7 3.9 0.00013 23.7 0.1 12 198-209 13-24 (46)
194 2eq0_A Zinc finger protein 347 48.6 3.4 0.00012 23.9 -0.2 12 198-209 13-24 (46)
195 2ytk_A Zinc finger protein 347 48.5 3.8 0.00013 23.6 0.1 12 198-209 13-24 (46)
196 2emh_A Zinc finger protein 484 48.4 3.5 0.00012 23.9 -0.2 12 198-209 13-24 (46)
197 2ytj_A Zinc finger protein 484 48.4 3.8 0.00013 23.6 0.1 12 198-209 13-24 (46)
198 2yu8_A Zinc finger protein 347 48.4 3.8 0.00013 23.6 0.1 12 198-209 13-24 (46)
199 2epz_A Zinc finger protein 28 48.2 3.8 0.00013 23.7 -0.0 12 198-209 13-24 (46)
200 2ytn_A Zinc finger protein 347 48.2 3.9 0.00013 23.6 0.1 12 198-209 13-24 (46)
201 2ema_A Zinc finger protein 347 48.0 3.9 0.00013 23.6 0.1 12 198-209 13-24 (46)
202 2em9_A Zinc finger protein 224 48.0 3.9 0.00014 23.5 0.1 12 198-209 13-24 (46)
203 2ysp_A Zinc finger protein 224 47.9 3.7 0.00013 23.7 -0.1 12 198-209 13-24 (46)
204 3noy_A 4-hydroxy-3-methylbut-2 47.9 7.5 0.00026 34.7 1.9 41 167-207 234-281 (366)
205 2enc_A Zinc finger protein 224 47.7 4 0.00014 23.6 0.1 12 198-209 13-24 (46)
206 2ytd_A Zinc finger protein 473 47.2 4.1 0.00014 23.5 0.1 12 198-209 13-24 (46)
207 2ep2_A Zinc finger protein 484 47.1 4.1 0.00014 23.5 0.1 12 198-209 13-24 (46)
208 2el6_A Zinc finger protein 268 47.1 4.1 0.00014 23.6 0.1 12 198-209 13-24 (46)
209 2el4_A Zinc finger protein 268 46.8 4.2 0.00014 23.4 0.1 12 198-209 13-24 (46)
210 2emp_A Zinc finger protein 347 46.6 4.3 0.00015 23.4 0.1 12 198-209 13-24 (46)
211 2emm_A ZFP-95, zinc finger pro 46.6 4.3 0.00015 23.4 0.1 12 198-209 13-24 (46)
212 2yso_A ZFP-95, zinc finger pro 46.5 3.9 0.00013 23.6 -0.2 12 198-209 13-24 (46)
213 2eq4_A Zinc finger protein 224 46.3 4.2 0.00015 23.4 0.0 12 198-209 13-24 (46)
214 2ytg_A ZFP-95, zinc finger pro 46.3 3.9 0.00013 23.6 -0.2 12 198-209 13-24 (46)
215 2en6_A Zinc finger protein 268 46.2 4 0.00014 23.5 -0.1 12 198-209 13-24 (46)
216 2ep0_A Zinc finger protein 28 46.2 4.4 0.00015 23.4 0.1 12 198-209 13-24 (46)
217 2en8_A Zinc finger protein 224 46.0 4 0.00014 23.5 -0.2 12 198-209 13-24 (46)
218 2eme_A Zinc finger protein 473 45.7 4.5 0.00015 23.3 0.1 12 198-209 13-24 (46)
219 2epq_A POZ-, at HOOK-, and zin 44.7 4.5 0.00015 23.3 -0.1 12 198-209 11-22 (45)
220 2en1_A Zinc finger protein 224 44.5 4.5 0.00015 23.3 -0.1 12 198-209 13-24 (46)
221 2ab3_A ZNF29; zinc finger prot 43.2 5.4 0.00018 20.0 0.1 11 199-209 4-16 (29)
222 2epr_A POZ-, at HOOK-, and zin 43.0 4.9 0.00017 23.6 -0.1 12 198-209 13-24 (48)
223 4gzn_C ZFP-57, zinc finger pro 42.4 4.9 0.00017 25.9 -0.2 16 193-209 29-44 (60)
224 1lko_A Rubrerythrin all-iron(I 42.0 15 0.0005 29.4 2.6 66 143-208 84-166 (191)
225 2epp_A POZ-, at HOOK-, and zin 41.9 5.2 0.00018 26.5 -0.1 12 198-209 14-25 (66)
226 2kq9_A DNAK suppressor protein 41.0 16 0.00056 26.7 2.5 33 174-206 55-90 (112)
227 2ba3_A NIKA; dimer, bacterial 39.8 16 0.00055 22.5 2.1 21 171-191 16-36 (51)
228 2eps_A POZ-, at HOOK-, and zin 39.6 6.2 0.00021 23.9 0.0 11 198-208 42-52 (54)
229 2gqj_A Zinc finger protein KIA 37.0 7.5 0.00026 26.7 0.1 12 198-209 55-66 (98)
230 1vd4_A Transcription initiatio 36.5 9 0.00031 24.0 0.4 12 198-209 40-51 (62)
231 6rxn_A Rubredoxin; electron tr 36.1 7.2 0.00025 24.4 -0.1 12 197-208 4-15 (46)
232 2drp_A Protein (tramtrack DNA- 35.9 7.1 0.00024 24.2 -0.2 10 199-208 12-21 (66)
233 2lce_A B-cell lymphoma 6 prote 35.6 7.3 0.00025 24.9 -0.2 12 198-209 46-57 (74)
234 3uk3_C Zinc finger protein 217 35.5 8.1 0.00028 23.1 0.1 12 198-209 33-44 (57)
235 1dxg_A Desulforedoxin; non-hem 35.4 6.6 0.00023 23.0 -0.3 15 193-207 2-16 (36)
236 1f2i_G Fusion of N-terminal 17 35.3 7.4 0.00025 24.7 -0.2 12 198-209 50-61 (73)
237 1l8d_A DNA double-strand break 35.2 21 0.00071 25.6 2.3 27 180-207 31-57 (112)
238 2lv2_A Insulinoma-associated p 34.8 7.6 0.00026 26.8 -0.2 10 199-208 30-39 (85)
239 1sp2_A SP1F2; zinc finger, tra 34.8 9.3 0.00032 19.7 0.2 11 199-209 4-16 (31)
240 2j6a_A Protein TRM112; transla 34.8 36 0.0012 26.2 3.7 87 119-208 21-120 (141)
241 1zfd_A SWI5; DNA binding motif 34.2 7.5 0.00026 20.2 -0.2 11 199-209 5-17 (32)
242 2ct1_A Transcriptional repress 34.1 8.7 0.0003 24.7 0.1 12 198-209 46-57 (77)
243 1yuz_A Nigerythrin; rubrythrin 33.0 15 0.00052 29.7 1.3 26 183-208 154-182 (202)
244 1bbo_A Human enhancer-binding 32.4 9.7 0.00033 22.7 0.1 12 198-209 30-41 (57)
245 3pwf_A Rubrerythrin; non heme 32.4 24 0.00082 27.7 2.4 45 164-208 97-149 (170)
246 1x6e_A Zinc finger protein 24; 32.2 9.9 0.00034 24.2 0.1 11 198-208 15-25 (72)
247 1tjl_A DNAK suppressor protein 32.0 29 0.00098 26.9 2.8 23 184-206 98-120 (151)
248 1x5w_A Zinc finger protein 64, 31.5 10 0.00035 23.9 0.1 12 198-209 38-49 (70)
249 1va1_A Transcription factor SP 31.3 11 0.00037 20.6 0.2 12 198-209 9-22 (37)
250 2jrr_A Uncharacterized protein 31.0 9.9 0.00034 25.8 -0.1 14 195-208 38-51 (67)
251 2adr_A ADR1; transcription reg 30.3 10 0.00034 23.0 -0.2 12 198-209 31-42 (60)
252 2d9h_A Zinc finger protein 692 29.3 11 0.00037 24.3 -0.2 12 198-209 39-50 (78)
253 1kaf_A Transcription regulator 29.0 1.1E+02 0.0039 22.4 5.4 57 125-191 51-107 (108)
254 2kn9_A Rubredoxin; metalloprot 27.8 12 0.00041 26.2 -0.1 14 195-208 25-38 (81)
255 2dlk_A Novel protein; ZF-C2H2 27.0 14 0.00049 23.5 0.1 10 198-207 69-78 (79)
256 2jvm_A Uncharacterized protein 27.0 14 0.00047 25.9 0.1 14 195-208 51-64 (80)
257 2ctu_A Zinc finger protein 483 26.8 16 0.00054 22.7 0.3 12 198-209 19-30 (73)
258 2ctd_A Zinc finger protein 512 26.8 30 0.001 23.8 1.8 14 194-207 31-44 (96)
259 2cot_A Zinc finger protein 435 26.6 15 0.00053 23.5 0.3 11 198-208 19-29 (77)
260 1s24_A Rubredoxin 2; electron 25.0 14 0.00049 26.2 -0.1 16 193-208 31-46 (87)
261 1fmh_B General control protein 24.8 26 0.0009 19.8 1.0 19 181-199 2-20 (33)
262 1x6f_A Zinc finger protein 462 24.5 16 0.00055 25.0 0.1 12 198-209 26-37 (88)
263 2ej4_A Zinc finger protein ZIC 24.1 19 0.00064 23.8 0.3 12 198-209 63-74 (95)
264 2ghf_A ZHX1, zinc fingers and 24.0 16 0.00054 26.0 -0.1 12 198-209 51-62 (102)
265 2dmi_A Teashirt homolog 3; zin 24.0 19 0.00065 24.8 0.4 14 194-207 47-60 (115)
266 2ebt_A Krueppel-like factor 5; 23.9 19 0.00064 24.0 0.3 13 197-209 75-87 (100)
267 1x6h_A Transcriptional repress 23.8 17 0.00058 23.4 0.1 11 198-208 16-26 (86)
268 2eln_A Zinc finger protein 406 22.8 18 0.00063 20.8 0.1 11 199-209 11-23 (38)
269 1zfo_A LAsp-1; LIM domain, zin 22.8 20 0.00068 20.0 0.2 8 199-206 5-12 (31)
270 1bhi_A CRE-BP1, ATF-2; CRE bin 22.5 19 0.00064 19.4 0.0 12 198-209 7-20 (38)
271 2kmk_A Zinc finger protein GFI 22.4 17 0.00058 23.1 -0.2 12 197-208 57-68 (82)
272 1ncs_A Peptide M30F, transcrip 22.3 21 0.00074 20.6 0.3 13 198-210 19-33 (47)
273 2yt9_A Zinc finger-containing 21.9 21 0.00071 23.5 0.2 12 197-208 65-76 (95)
274 1vzy_A 33 kDa chaperonin; chap 21.7 39 0.0013 28.8 1.9 29 176-208 248-276 (291)
275 2odx_A Cytochrome C oxidase po 21.4 20 0.00068 25.0 -0.0 11 199-209 58-68 (80)
276 2k5c_A Uncharacterized protein 21.0 19 0.00064 25.5 -0.2 11 198-208 52-62 (95)
277 3fxb_A Trap dicarboxylate tran 20.7 82 0.0028 26.6 3.8 55 137-194 236-300 (326)
278 2wbs_A Krueppel-like factor 4; 20.6 22 0.00074 23.1 0.1 13 197-209 65-77 (89)
279 1gh9_A 8.3 kDa protein (gene M 20.6 22 0.00074 24.2 0.0 12 197-209 21-32 (71)
280 2dmd_A Zinc finger protein 64, 20.3 22 0.00076 23.4 0.1 13 197-209 64-76 (96)
281 1a1h_A QGSR zinc finger peptid 20.1 21 0.0007 23.2 -0.2 12 198-209 63-74 (90)
No 1
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=99.97 E-value=3.5e-31 Score=234.93 Aligned_cols=140 Identities=22% Similarity=0.390 Sum_probs=126.6
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.|+..-+.+||.+|||++||||+| |.||++||+ ++||+++|+++++| |||++|||+||++ +
T Consensus 129 Pvd~~t~~~~k~sg~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~viG~Hg~t~vp~~S~~---------~ 195 (315)
T 3tl2_A 129 PVDAMTYSVFKEAGFPKERVIGQS--GVLDTARFR--TFIAQELNLSVKDITGFVLGGHGDDMVPLVRYS---------Y 195 (315)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTCCGGGEECCEEBCSGGGCEECGGGC---------E
T ss_pred hHHHHHHHHHHhcCCChHHEEeec--cCcHHHHHH--HHHHHHhCcCHHHceeeEecCCCCcceeecccC---------e
Confidence 344555778999999999999999 999999999 99999999999999 9999999999999 8
Q ss_pred ccCcccccccc---------------------------------------chhhccCCceeEeE-eecCccccccceEee
Q psy17692 81 NCIVPKELYCP---------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLS 120 (211)
Q Consensus 81 v~g~pv~~~~~---------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s 120 (211)
++|+|+.++++ +++.+|+++++|++ +++|+||+ +|+|+|
T Consensus 196 v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~~~kgst~~a~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s 274 (315)
T 3tl2_A 196 AGGIPLETLIPKERLEAIVERTRKGGGEIVGLLGNGSAYYAPAASLVEMTEAILKDQRRVLPAIAYLEGEYGY-SDLYLG 274 (315)
T ss_dssp ETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEE
T ss_pred ECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHcCCCcEEEEEEeccCccCC-CceEEE
Confidence 88888877553 45677888999999 79999999 799999
Q ss_pred eceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 121 LPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 121 ~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+|+++|++|+.+++++.|+++|++.|..|++.+++.++.+
T Consensus 275 ~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 314 (315)
T 3tl2_A 275 VPVILGGNGIEKIIELELLADEKEALDRSVESVRNVMKVL 314 (315)
T ss_dssp EEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998877653
No 2
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=99.97 E-value=5.7e-31 Score=235.10 Aligned_cols=139 Identities=26% Similarity=0.362 Sum_probs=124.3
Q ss_pred chhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccccc
Q psy17692 9 SSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 9 ~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
+.--+.+||.+||||+||||+| |.||++||+ ++||+++|+++++| ||||+|||+||++ +++
T Consensus 140 di~t~~~~k~sg~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~V~~~ViGeHG~s~vp~~S~~---------~v~ 206 (331)
T 4aj2_A 140 DILTYVAWKISGFPKNRVIGSG--CNLDSARFR--YLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGV---------NVA 206 (331)
T ss_dssp HHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTSCGGGCBCCEEBCSSTTCEECGGGC---------EET
T ss_pred HHHHHHHHHHhCCCHHHEEeec--cccHHHHHH--HHHHHHhCCCHHHCEEeEEecCCCceeEeeecC---------eEC
Confidence 3344668999999999999999 999999999 99999999999999 9999999999999 888
Q ss_pred Ccccccccc--------------------------------------------chhhccCCceeEeE-eecCccccccce
Q psy17692 83 IVPKELYCP--------------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEV 117 (211)
Q Consensus 83 g~pv~~~~~--------------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV 117 (211)
|+|+.++++ +++++|+++++|++ +++|+||+.+|+
T Consensus 207 G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kg~t~~a~a~a~a~~~~ail~d~~~~~~vs~~~~g~ygi~~~v 286 (331)
T 4aj2_A 207 GVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDV 286 (331)
T ss_dssp TEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTCCEEEEEEEECTTGGGCCSCC
T ss_pred CEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhcCCCCchhHHHHHHHHHHHHHhCCCCeEEEEEecCCccCCcCce
Confidence 888754421 45788899999998 799999996699
Q ss_pred EeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 118 FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 118 ~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+|+|+++|++|+.+++++.|+++|++.|..|++.++++..++
T Consensus 287 ~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~~~~~~ 329 (331)
T 4aj2_A 287 FLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 329 (331)
T ss_dssp EEEEEEEEETTEEEEEECCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEcCCeeEEEccCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999888876543
No 3
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=99.97 E-value=4.9e-31 Score=235.05 Aligned_cols=139 Identities=19% Similarity=0.211 Sum_probs=125.1
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|+.--+.+||.+|||++||||+| |.||++||+ ++||+++|+++++| |||++|||+||++ ++
T Consensus 125 vd~~t~~~~k~~g~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~V~~~V~GeHG~t~vp~~S~~---------~v 191 (326)
T 3pqe_A 125 VDILTYATWKFSGLPKERVIGSG--TTLDSARFR--FMLSEYFGAAPQNVCAHIIGEHGDTELPVWSHA---------NV 191 (326)
T ss_dssp HHHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEEBSSSTTCEECGGGC---------EE
T ss_pred HHHHHHHHHHhcCCCHHHEEeec--cccHHHHHH--HHHHHHhCCCHHHceeeeeecCCCceeeeeeee---------eE
Confidence 33444678999999999999999 999999999 99999999999999 9999999999999 88
Q ss_pred cCccccccc------c-------------------------------------chhhccCCceeEeE-eecCccccccce
Q psy17692 82 CIVPKELYC------P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEV 117 (211)
Q Consensus 82 ~g~pv~~~~------~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV 117 (211)
+|.|+.+++ + +++++|+++++|++ +++|+||+ +|+
T Consensus 192 ~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kG~t~~a~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~v 270 (326)
T 3pqe_A 192 GGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARITKAILHNENSILTVSTYLDGQYGA-DDV 270 (326)
T ss_dssp TTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEECCEEEEESGGGC-EEE
T ss_pred CCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccccCC-Cce
Confidence 888875552 1 45778889999988 79999999 699
Q ss_pred EeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 118 FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 118 ~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+|+|++||++|+.+++++.|+++|++.|..|++.+++.++.+
T Consensus 271 ~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~~~~~~ 313 (326)
T 3pqe_A 271 YIGVPAVVNRGGIAGITELNLNEKEKEQFLHSAGVLKNILKPH 313 (326)
T ss_dssp EEECCEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998887754
No 4
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=99.97 E-value=4.2e-31 Score=234.37 Aligned_cols=145 Identities=16% Similarity=0.248 Sum_probs=128.5
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|++.-+.+||.+|||++||||+| |.||++||+ ++||+++|+++++| |||++|||+||++ ++
T Consensus 121 vd~~t~~~~k~~g~p~~rviG~~--t~LD~~R~~--~~la~~lgv~~~~v~~~ViG~Hg~t~vp~~S~~---------~v 187 (314)
T 3nep_X 121 LDVMTYVAYEASGFPTNRVMGMA--GVLDTGRFR--SFIAEELDVSVRDVQALLMGGHGDTMVPLPRYT---------TV 187 (314)
T ss_dssp HHHHHHHHHHHHTCCGGGEEECC--HHHHHHHHH--HHHHHHHTCCGGGEEEEEEESSGGGEEEEEEEE---------EE
T ss_pred hhHHHHHHHHhcCCChHHEEeec--CchHHHHHH--HHHHHHhCcCHHHeEEEEECCCCCcEEeeeecC---------eE
Confidence 44555778999999999999999 999999999 99999999999999 9999999999999 77
Q ss_pred cCcccccccc--------------------------------------chhhccCCceeEeE-eecCccccccceEeeec
Q psy17692 82 CIVPKELYCP--------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLP 122 (211)
Q Consensus 82 ~g~pv~~~~~--------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P 122 (211)
+|+|+.++++ +++.+|+++++|++ +++|+||+ +|+|+|+|
T Consensus 188 ~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~kg~sa~~a~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P 266 (314)
T 3nep_X 188 GGIPVPQLIDDARIEEIVERTKGAGGEIVDLMGTSAWYAPGAAAAEMTEAILKDNKRILPCAAYCDGEYGL-DDLFIGVP 266 (314)
T ss_dssp TTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHTCCEEEEEEEEEESGGGC-EEEEEEEE
T ss_pred CcEehhhccCHHHHHHHHHHHHHhHHHHHhccCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEEEeccccCC-CceEEEEE
Confidence 8888766543 45677888999998 79999999 79999999
Q ss_pred eEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccceeecC
Q psy17692 123 CVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLPCVMAD 166 (211)
Q Consensus 123 ~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP~vlg~ 166 (211)
+++|++|+.+++++.|+++|++.|..|++.+++.++.+..++..
T Consensus 267 ~~lg~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~~~~l~~ 310 (314)
T 3nep_X 267 VKLGAGGVEEVIEVDLDADEKAQLKTSAGHVHSNLDDLQRLRDE 310 (314)
T ss_dssp EEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998888877666555543
No 5
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=99.97 E-value=5.5e-31 Score=231.83 Aligned_cols=139 Identities=21% Similarity=0.239 Sum_probs=121.8
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc----cCCCceeeecccccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV----SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V----eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
.|++.-+.+||.+|||++|+||+| |+|||+||| ++|++++++++.+. ||||+|+|+||++ +++
T Consensus 120 Pvd~~t~i~~k~sg~p~~rvig~g--T~LDs~R~~--~~l~~~~~~~~~~~~V~G~HGdt~vp~~S~~---------~v~ 186 (294)
T 2x0j_A 120 PMDVMTYIMWKESGKPRNEVFGMG--NQLDSQRLK--ERLYNAGARNIRRAWIIGEHGDSMFVAKSLA---------DFD 186 (294)
T ss_dssp SHHHHHHHHHHHSSCCTTSEEECC--HHHHHHHHH--HHHHHTTCEEECCCCEEBCSSTTCEECGGGC---------CEE
T ss_pred cchhhHHhhHHHcCCChhhEEEee--eEEeHHHHH--HHHhhcccCCcceeEEEecCCCcEEEeeecc---------CCC
Confidence 467777899999999999999999 999999999 99999999987655 9999999999999 555
Q ss_pred Ccccccccc-----------------------------chhhccCCceeEeE-eecCccccccceEeeeceEEecceEEE
Q psy17692 83 IVPKELYCP-----------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVMADNGVTH 132 (211)
Q Consensus 83 g~pv~~~~~-----------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vig~~GV~~ 132 (211)
|.|..+.+. +++.+|+++++|++ +++|+||+ +|+|+|+|++||++|+ +
T Consensus 187 g~~~~~~i~~~~~~~g~eIi~~kGst~~a~a~a~~~~~~ail~d~~~v~~~s~~l~g~yG~-~~v~~s~P~~lg~~Gv-e 264 (294)
T 2x0j_A 187 GEVDWEAVENDVRFVAAEVIKRKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGA-E 264 (294)
T ss_dssp SCCCHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEE-E
T ss_pred CchhHHHHHHHHhhhheEEEecCcccchhHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCC-ccEEEEEEEEEeCCEE-E
Confidence 544322111 67899999999999 79999999 7999999999999998 5
Q ss_pred EecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 133 IVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 133 Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
++++.|+++|++.|..|++.+++.++.+
T Consensus 265 i~~l~L~~~E~~~l~~s~~~lk~~i~~l 292 (294)
T 2x0j_A 265 VADIKLSDEEIEKLRNSAKILRERLEEL 292 (294)
T ss_dssp ECCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999898877643
No 6
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=99.97 E-value=5.6e-31 Score=234.74 Aligned_cols=140 Identities=21% Similarity=0.288 Sum_probs=121.9
Q ss_pred chhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccccc
Q psy17692 9 SSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 9 ~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
+.--+.+||.+|||++||||+| |.||++||+ ++||+++|+++++| |||++|||+||++ +++
T Consensus 129 di~t~~~~k~~g~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~V~~~ViGeHGdt~vp~~S~a---------~v~ 195 (326)
T 3vku_A 129 DILTYATWKLSGFPKNRVVGSG--TSLDTARFR--QSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHA---------NIG 195 (326)
T ss_dssp HHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTSCGGGEECCEEBSSSTTCEECGGGC---------EET
T ss_pred HHHHHHHHHhcCCCHHHeeeec--ccCcHHHHH--HHHHHHhCCCHHHCeEEEEcCCCCeeEEeeecc---------ccC
Confidence 3344678999999999999999 999999999 99999999999999 9999999999999 888
Q ss_pred Cccccccc------c-------------------------------------chhhccCCceeEeE-eecCccccccceE
Q psy17692 83 IVPKELYC------P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVF 118 (211)
Q Consensus 83 g~pv~~~~------~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~ 118 (211)
|.|+.+++ . +++.+|+++++|++ +++|+||+ +|+|
T Consensus 196 g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kG~t~~a~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~v~ 274 (326)
T 3vku_A 196 GVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVYMDGQYGL-NDIY 274 (326)
T ss_dssp TEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEGGGE-EEEE
T ss_pred CEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHhcCCCceEEEEeeccCccCC-CceE
Confidence 88875442 1 45778889999997 79999999 7999
Q ss_pred eeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccce
Q psy17692 119 LSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLPC 162 (211)
Q Consensus 119 ~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP~ 162 (211)
+|+|+++|++|+.+++++.|+++|++.|..|++.+++.++.+..
T Consensus 275 ~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~sa~~L~~~~~~~~~ 318 (326)
T 3vku_A 275 IGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFA 318 (326)
T ss_dssp EEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHCC------
T ss_pred EEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888776633
No 7
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=99.96 E-value=5.9e-30 Score=225.07 Aligned_cols=139 Identities=20% Similarity=0.222 Sum_probs=120.6
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCC-c----cCCCceeeeccccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRT-V----SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~-V----eHGds~vp~~S~~~i~~~il~~~v 81 (211)
.|+..-+.+||.+|||++||||+| |.|||+||+ ++|| ++|++|++ + |||++|+|+||++ ++
T Consensus 120 Pvd~~t~~~~k~~g~p~~rviG~g--t~LD~~R~~--~~la-~l~v~~~~~~~V~G~Hg~t~vp~~s~~---------~v 185 (294)
T 1oju_A 120 PMDVMTYIMWKESGKPRNEVFGMG--NQLDSQRLK--ERLY-NAGARNIRRAWIIGEHGDSMFVAKSLA---------DF 185 (294)
T ss_dssp SHHHHHHHHHHHSCCCTTSEEECS--HHHHHHHHH--HHHH-HTTCBSCCCCCEEBCSSTTCEECGGGC---------CC
T ss_pred cchHHHHHHHHhcCCCHHHEeecc--cccHHHHHH--HHHH-HhCCCccCceEEEecCCCceeeecccc---------eE
Confidence 344555778999999999999999 999999999 9999 99999874 3 9999999999999 66
Q ss_pred cCcc-cccccc----------------------------chhhccCCceeEeE-eecCccccccceEeeeceEEecceEE
Q psy17692 82 CIVP-KELYCP----------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVMADNGVT 131 (211)
Q Consensus 82 ~g~p-v~~~~~----------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vig~~GV~ 131 (211)
+|.| ..++.. +++.+|+++++|++ +++|+||+ +|+|+|+|+++|++|+.
T Consensus 186 ~g~~~~~~~~~~v~~~g~eii~~kG~t~~~~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~~g~~Gv~ 264 (294)
T 1oju_A 186 DGEVDWEAVENDVRFVAAEVIKRKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGAE 264 (294)
T ss_dssp BSCCCHHHHHHHHHTTHHHHHHHHSSCCHHHHHHHHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHcCCCeEEEEEecccccCCC-CceEEEEEEEEeCCEEE
Confidence 6666 111111 56888999999999 79999999 69999999999999999
Q ss_pred EEecCCCCHHHHHHHHhhHHhHHhhhcccc
Q psy17692 132 HIVNQPLTQEEIEKLKKSAQAIKEVFLSLP 161 (211)
Q Consensus 132 ~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP 161 (211)
++++.|+++|++.|..|++.+++.++.++
T Consensus 265 -v~~l~L~~~E~~~l~~s~~~l~~~~~~~~ 293 (294)
T 1oju_A 265 -VADIKLSDEEIEKLRNSAKILRERLEELG 293 (294)
T ss_dssp -ECCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -EecCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999988876653
No 8
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=99.96 E-value=3.1e-30 Score=229.71 Aligned_cols=140 Identities=18% Similarity=0.269 Sum_probs=124.7
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| |||++|+|+||++ +
T Consensus 126 Pvd~~t~~~~k~sg~p~~rviG~~--~~LD~~R~~--~~la~~lgv~~~~v~~~v~G~HG~t~~p~~s~~---------~ 192 (324)
T 3gvi_A 126 PLDAMVWALQKFSGLPAHKVVGMA--GVLDSARFR--YFLSEEFNVSVEDVTVFVLGGHGDSMVPLARYS---------T 192 (324)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTCCGGGEECCEEECSGGGEEECGGGC---------E
T ss_pred CcHHHHHHHHHhcCCCHHHEEeec--CccHHHHHH--HHHHHHhCcCHHHCeEEEEcCCCCceeeehhhC---------e
Confidence 344555678999999999999999 999999999 99999999999999 9999999999999 7
Q ss_pred ccCccccccc-----c---------------------------------------chhhccCCceeEeE-eecCcccccc
Q psy17692 81 NCIVPKELYC-----P---------------------------------------EIEDREQDRRKPAI-HLLGHHGIEE 115 (211)
Q Consensus 81 v~g~pv~~~~-----~---------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~ 115 (211)
++|+|+.+++ . +++.+|+++++|++ +++|+||+ +
T Consensus 193 v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~gkgsa~~~~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~ 271 (324)
T 3gvi_A 193 VAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGV-K 271 (324)
T ss_dssp ETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-E
T ss_pred ECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCcEEEEEEEecCccCC-C
Confidence 7777765542 1 45778889999999 79999999 6
Q ss_pred ceEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 116 EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 116 dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+|+|+||++|++|+.+++++.|+++|++.|..|++.+++.++.+
T Consensus 272 ~v~~s~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 316 (324)
T 3gvi_A 272 DMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSVASVAGLCEAC 316 (324)
T ss_dssp EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888877654
No 9
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=99.96 E-value=2.4e-30 Score=229.97 Aligned_cols=141 Identities=19% Similarity=0.266 Sum_probs=124.3
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.|+..-+.+||.+|||++||||+| |.|||+||+ ++||+++|+++++| |||++|+|+||++ +
T Consensus 124 Pvd~~t~~~~k~sg~p~~rviG~~--~~LD~~R~~--~~la~~l~v~~~~v~~~v~G~HG~t~~p~~s~~---------~ 190 (321)
T 3p7m_A 124 PLDIMVNMLQKFSGVPDNKIVGMA--GVLDSARFR--TFLADELNVSVQQVQAYVMGGHGDTMVPLTKMS---------N 190 (321)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEEEC--HHHHHHHHH--HHHHHHHTCCGGGEECCEEECSGGGEEECTTTC---------E
T ss_pred chHHHHHHHHHhcCCCHHHEEeec--cchHHHHHH--HHHHHHhCcCHHHceEeeecCcCCceeeeeeec---------e
Confidence 344555778999999999999999 999999999 99999999999999 9999999999999 7
Q ss_pred ccCccccccc-----c---------------------------------------chhhccCCceeEeE-eec-Cccccc
Q psy17692 81 NCIVPKELYC-----P---------------------------------------EIEDREQDRRKPAI-HLL-GHHGIE 114 (211)
Q Consensus 81 v~g~pv~~~~-----~---------------------------------------~~i~~d~~~i~~vs-~l~-G~yGi~ 114 (211)
++|+|+.+++ . +++.+|+++++|++ +++ |+||+.
T Consensus 191 v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~g~gsa~~~~a~a~~~~~~ail~~~~~v~~~s~~~~~g~ygi~ 270 (321)
T 3p7m_A 191 VAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALLKTGSAYYAPAAAGIQMAESFLKDKKMILPCAAKVKAGMYGLD 270 (321)
T ss_dssp ETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTGGGCS
T ss_pred ECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhcCCCChHHHHHHHHHHHHHHHHcCCCcEEEEEEEccCcccCCC
Confidence 7777765442 1 45778889999999 789 899995
Q ss_pred cceEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccc
Q psy17692 115 EEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLP 161 (211)
Q Consensus 115 ~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP 161 (211)
+|+|+|+||++|++|+.++ ++.|+++|++.|..|++.+++.++.+.
T Consensus 271 ~~v~~s~P~~~g~~Gv~~v-~l~L~~~E~~~l~~s~~~l~~~~~~~~ 316 (321)
T 3p7m_A 271 EDLFVGVPTEISANGVRPI-EVEISDKEREQLQVSINAIKDLNKAAA 316 (321)
T ss_dssp SCEEEEEEEEEETTEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999 999999999999999988888776553
No 10
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=99.96 E-value=3.3e-30 Score=233.52 Aligned_cols=149 Identities=11% Similarity=0.060 Sum_probs=129.1
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeeccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVSSR 79 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il~~ 79 (211)
.|++.-+.+||.+|++|+|+||+| |.|||+||| ++||+++|++|++| ||||+|||+||++
T Consensus 160 PvD~~t~ia~k~sg~~~~rvig~g--T~LDsaR~r--~~lA~~lgv~~~~V~~v~V~GeHgdt~vp~~S~a--------- 226 (375)
T 7mdh_A 160 PCNTNALICLKNAPDIPAKNFHAL--TRLDENRAK--CQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNA--------- 226 (375)
T ss_dssp SHHHHHHHHHHTCTTSCGGGEEEC--CHHHHHHHH--HHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSC---------
T ss_pred chhHHHHHHHHHcCCCCccEEEee--ehHHHHHHH--HHHHHHhCcChhhcccceEEecCCCceeeeeecc---------
Confidence 344555688999999999999999 999999999 99999999999987 9999999999999
Q ss_pred cccCcccccccc-------------------------------------chhh-----ccCCceeEeE-eecC-cccccc
Q psy17692 80 KNCIVPKELYCP-------------------------------------EIED-----REQDRRKPAI-HLLG-HHGIEE 115 (211)
Q Consensus 80 ~v~g~pv~~~~~-------------------------------------~~i~-----~d~~~i~~vs-~l~G-~yGi~~ 115 (211)
+++|+|+.+++. +++. +|+++++|++ +++| +||+.+
T Consensus 227 ~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~ts~a~aa~~i~~~i~~~l~g~d~~~v~~vs~~~~G~~YGi~~ 306 (375)
T 7mdh_A 227 KIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAE 306 (375)
T ss_dssp EETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHHHHHHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCS
T ss_pred cCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCccCCCCC
Confidence 889999877653 2233 4788999999 6999 799967
Q ss_pred ceEeeeceEEecceEEEEec-CCCCHHHHHHHHhhHHhHHhhhcccceeecCCc
Q psy17692 116 EVFLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKEVFLSLPCVMADNG 168 (211)
Q Consensus 116 dV~~s~P~vig~~GV~~Ive-~iLsdeE~~iL~~Sa~~l~~~~~svP~vlg~~G 168 (211)
|+|+|+||++|++|+.++++ +.|+++|+++|..|++.+++..+.+-.+|+..|
T Consensus 307 dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l~~Sa~~L~~e~~~~~~~~~~~~ 360 (375)
T 7mdh_A 307 DIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLTGEGN 360 (375)
T ss_dssp SSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHTHHHHTSSS
T ss_pred ceEEEEEEEEcCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999995 999999999999999888777666655666654
No 11
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=99.94 E-value=1.2e-27 Score=210.32 Aligned_cols=135 Identities=19% Similarity=0.198 Sum_probs=120.7
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||.+ ++
T Consensus 122 v~~~~~~~~~~~~~p~~rviG~g--t~Ld~~r~~--~~la~~l~v~~~~v~~~v~G~HG~~~~p~~s~~---------~v 188 (303)
T 1o6z_A 122 VDLLNRHLYEAGDRSREQVIGFG--GRLDSARFR--YVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKV---------SV 188 (303)
T ss_dssp HHHHHHHHHHHSSSCGGGEEECC--HHHHHHHHH--HHHHHHHTCCGGGEECCEEECSSTTEEECGGGC---------EE
T ss_pred HHHHHHHHHHHcCCCHHHeeecc--cchhHHHHH--HHHHHHhCcCHHHeEEEEEeCCCCccccCCccc---------cc
Confidence 44445678999999999999999 999999999 99999999999999 9999999999999 66
Q ss_pred cCcccccccc-------------------------------------chhhccCCceeEeE-eecCccccccceEeeece
Q psy17692 82 CIVPKELYCP-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPC 123 (211)
Q Consensus 82 ~g~pv~~~~~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~ 123 (211)
+|+| +|+. +++.+|++++++++ +.+|+||+ +|+|+|+||
T Consensus 189 ~g~p--~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~ 265 (303)
T 1o6z_A 189 DGTD--PEFSGDEKEQLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGH-EDTAFGVPV 265 (303)
T ss_dssp TTBC--CCCCHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEE
T ss_pred CCcC--ccCCHHHHHHHHHHHHHHhHHHHhcCCChHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCccCC-cceEEEEEE
Confidence 7776 4421 45788889999988 68999999 899999999
Q ss_pred EEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhc
Q psy17692 124 VMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 124 vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~ 158 (211)
+||++|+.++++..|+++|++.|..|++.+++.++
T Consensus 266 ~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~ 300 (303)
T 1o6z_A 266 SLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYD 300 (303)
T ss_dssp EEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988887654
No 12
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=99.94 E-value=5.4e-28 Score=214.34 Aligned_cols=137 Identities=19% Similarity=0.300 Sum_probs=121.3
Q ss_pred hhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccC
Q psy17692 10 SRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCI 83 (211)
Q Consensus 10 ~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g 83 (211)
..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++|+|+||++ +++|
T Consensus 126 ~~t~~~~k~s~~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~v~G~HG~t~~p~~s~~---------~v~g 192 (318)
T 1ez4_A 126 ILTYATWKFSGFPKERVIGSG--TSLDSSRLR--VALGKQFNVDPRSVDAYIMGEHGDSEFAAYSTA---------TIGT 192 (318)
T ss_dssp HHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEESSSSSSCEECGGGC---------EETT
T ss_pred HHHHHHHHHcCCCHHHEEecc--ccchHHHHH--HHHHHHhCcChhHEEEEEecccCCceEEEehhh---------cCCC
Confidence 334678999999999999999 999999999 99999999999999 9999999999999 6677
Q ss_pred ccccccc------c------------------------------------chhhccCCceeEeE-eecCccccccceEee
Q psy17692 84 VPKELYC------P------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLS 120 (211)
Q Consensus 84 ~pv~~~~------~------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s 120 (211)
.|+.+++ + +++.+|++++++++ +.+|+||+ +|+|+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~~~~ai~~~~~~~~~vs~~~~G~yg~-~~~~~~ 271 (318)
T 1ez4_A 193 RPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL-NDIYIG 271 (318)
T ss_dssp EEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEE
T ss_pred eeHHHHhhccCCCHHHHHHHHHHHHHhhhhheeCCCcchHHHHHHHHHHHHHHHhCCCcEEEEEEeecCccCC-CceEEE
Confidence 6664431 0 45788889999998 68999999 599999
Q ss_pred eceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 121 LPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 121 ~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+||+||++|+.++++..|+++|++.|..|++.+++..+.+
T Consensus 272 vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 311 (318)
T 1ez4_A 272 TPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVLNDG 311 (318)
T ss_dssp EEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888776544
No 13
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=99.94 E-value=1.6e-27 Score=210.76 Aligned_cols=139 Identities=18% Similarity=0.230 Sum_probs=123.8
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.++..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||++ +
T Consensus 125 Pv~~~~~~~~~~s~~p~~rviG~g--t~lD~~r~~--~~la~~l~v~~~~v~~~v~G~HG~~~~p~~s~~---------~ 191 (316)
T 1ldn_A 125 PVDILTYATWKFSGLPHERVIGSG--TILDTARFR--FLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQA---------Y 191 (316)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEECT--THHHHHHHH--HHHHHHHTSCGGGEEEEEEBCSSTTCEEEEEEE---------E
T ss_pred chHHHHHHHHHHhCCCHHHEEecc--cchHHHHHH--HHHHHHhCCCHHHeEEEEecccCCceeeeehhc---------c
Confidence 345555788999999999999999 999999999 99999999999999 9999999999999 7
Q ss_pred ccCcccccccc-------------------------------------------chhhccCCceeEeE-eecCccccccc
Q psy17692 81 NCIVPKELYCP-------------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEE 116 (211)
Q Consensus 81 v~g~pv~~~~~-------------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~d 116 (211)
++|.|+.++++ +++.+|++++++++ +.+|+||+ +|
T Consensus 192 v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~yg~-~~ 270 (316)
T 1ldn_A 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE-RD 270 (316)
T ss_dssp ETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESTTSC-EE
T ss_pred CCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHhccCCcHHHHHHHHHHHHHHHHhCCCcEEEEEEEecCccCC-cc
Confidence 77777765421 35777888999998 68999999 89
Q ss_pred eEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcc
Q psy17692 117 VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLS 159 (211)
Q Consensus 117 V~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~s 159 (211)
+|+|+||+||++|+.++++..|+++|++.|..|++.+++..+.
T Consensus 271 ~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~ 313 (316)
T 1ldn_A 271 VYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLAR 313 (316)
T ss_dssp EEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEeCCeeEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877653
No 14
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=99.94 E-value=9e-28 Score=211.97 Aligned_cols=139 Identities=23% Similarity=0.338 Sum_probs=123.2
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++|+|+||++ ++
T Consensus 119 v~~~t~~~~k~~~~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~v~G~Hg~t~~p~~s~~---------~v 185 (308)
T 2d4a_B 119 VDAMTYVMYKKTGFPRERVIGFS--GILDSARMA--YYISQKLGVSFKSVNAIVLGMHGQKMFPVPRLS---------SV 185 (308)
T ss_dssp HHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTSCGGGEECCEEBCSSTTCEECGGGC---------EE
T ss_pred hHHHHHHHHHhcCCChhhEEEec--ccchHHHHH--HHHHHHhCcChhHeEEEEEeccCCceeeeehhc---------cC
Confidence 34444678999999999999999 999999999 99999999999999 9999999999999 66
Q ss_pred cCcccccccc--------------------------------------chhhccCCceeEeE-eecCccccccceEeeec
Q psy17692 82 CIVPKELYCP--------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLP 122 (211)
Q Consensus 82 ~g~pv~~~~~--------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P 122 (211)
+|.|+.+|+. +++.+|++++++++ +.+|+||+ +|+|+|+|
T Consensus 186 ~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~s~~~~~a~a~~~~~~ai~~~~~~v~~vs~~~~G~yg~-~~~~~~vP 264 (308)
T 2d4a_B 186 GGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVLTVEAIKRDSKRIYPYSLYLQGEYGY-NDIVAEVP 264 (308)
T ss_dssp TTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEE
T ss_pred CCEEHHHHcCHHHHHHHHHHHHHhhHhhhhCCCCccHHHHHHHHHHHHHHHHhCCCcEEEEEEEEcCccCC-CceEEEEE
Confidence 6666644432 45788889999998 68999999 89999999
Q ss_pred eEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 123 CVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 123 ~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+||++|+.++++..|+++|++.|..|++.+++..+.+
T Consensus 265 ~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 302 (308)
T 2d4a_B 265 AVIGKSGIERIIELPLTEDEKRKFDEAVQAVKKLVETL 302 (308)
T ss_dssp EEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEcCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888877655
No 15
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=99.94 E-value=1.4e-27 Score=210.51 Aligned_cols=140 Identities=18% Similarity=0.342 Sum_probs=123.3
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.++..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++|+|+||++ +
T Consensus 121 Pv~~~t~~~~~~~~~~~~rviG~g--t~LD~~r~~--~~la~~lgv~~~~v~~~v~G~Hg~t~~p~~s~~---------~ 187 (309)
T 1ur5_A 121 PLDAMTYLAAEVSGFPKERVIGQA--GVLDAARYR--TFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFS---------C 187 (309)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTCCGGGEEECCEECSGGGEECCGGGE---------E
T ss_pred chHHHHHHHHHHcCCCHHHEEECC--cchHHHHHH--HHHHHHhCCChhheeEEEecCcCCceeeeeecc---------e
Confidence 344555778999999999999999 999999999 99999999999999 9999999999999 6
Q ss_pred ccCcccccccc---------------------------------------chhhccCCceeEeE-eecCccccccceEee
Q psy17692 81 NCIVPKELYCP---------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLS 120 (211)
Q Consensus 81 v~g~pv~~~~~---------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s 120 (211)
++|.|+.+|+. +++.+|+++++|++ +.+|+||+ +|+|+|
T Consensus 188 v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~~~kgs~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~ 266 (309)
T 1ur5_A 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGL-NDIYFG 266 (309)
T ss_dssp ETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEE
T ss_pred eCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhhccCCCcHHHHHHHHHHHHHHHHcCCCcEEEEEEEecCccCC-cceEEE
Confidence 66666655432 35677888999998 68999999 899999
Q ss_pred eceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 121 LPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 121 ~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+||+||++|+.++++..|+++|++.|..|++.+++..+.+
T Consensus 267 vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 306 (309)
T 1ur5_A 267 VPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL 306 (309)
T ss_dssp EEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888776543
No 16
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=99.94 E-value=1.5e-27 Score=211.03 Aligned_cols=138 Identities=23% Similarity=0.284 Sum_probs=121.6
Q ss_pred chhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccccc
Q psy17692 9 SSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 9 ~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||++ +++
T Consensus 127 ~~~t~~~~k~~~~p~~rviG~g--t~lD~~r~~--~~la~~l~v~~~~v~~~v~G~HG~t~~p~~s~~---------~v~ 193 (317)
T 3d0o_A 127 DILAYATWKFSGLPKERVIGSG--TILDSARFR--LLLSEAFDVAPRSVDAQIIGEHGDTELPVWSHA---------NIA 193 (317)
T ss_dssp HHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTSCGGGCBCCEEBCSSTTCEECTTTC---------EET
T ss_pred HHHHHHHHHHhCCCHHHEEecC--ccccHHHHH--HHHHHHhCcChhhEEEEEEecCCCCeeEeeecc---------ccC
Confidence 3344678999999999999999 999999999 99999999999999 9999999999999 666
Q ss_pred Ccccccccc------------------------------------------chhhccCCceeEeE-eecCccccccceEe
Q psy17692 83 IVPKELYCP------------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFL 119 (211)
Q Consensus 83 g~pv~~~~~------------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~ 119 (211)
|.|+.++++ +++.+|++++++++ +.+|+||+ +|+|+
T Consensus 194 g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~ 272 (317)
T 3d0o_A 194 GQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEE-EDVYI 272 (317)
T ss_dssp TEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEE
T ss_pred CEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEeCCCCchHhHHHHHHHHHHHHHcCCCcEEEEEEeecCccCC-CceEE
Confidence 766644320 45788889999998 68999999 59999
Q ss_pred eeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 120 SLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 120 s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+||+||++|+..+++..|+++|++.|..|++.+++..+.+
T Consensus 273 ~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 313 (317)
T 3d0o_A 273 GVPAVINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEA 313 (317)
T ss_dssp EEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEEeCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888876644
No 17
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=99.94 E-value=3.3e-27 Score=209.05 Aligned_cols=139 Identities=24% Similarity=0.250 Sum_probs=122.8
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||++ ++
T Consensus 126 v~~~~~~~~k~s~~p~~rviG~g--t~Ld~~r~~--~~la~~lgv~~~~v~~~v~G~HG~t~~p~~s~~---------~v 192 (318)
T 1y6j_A 126 VDIITYMIQKWSGLPVGKVIGSG--TVLDSIRFR--YLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCT---------HI 192 (318)
T ss_dssp HHHHHHHHHHHHTCCTTTEEECT--THHHHHHHH--HHHHTTTTCCTTTEECCEEBCSSSSCEECCTTC---------EE
T ss_pred HHHHHHHHHHHcCCCHHHEeccC--CchHHHHHH--HHHHHHhCCCHHHeEEEEecccCCcEeeeehhc---------eE
Confidence 34445678999999999999999 999999999 99999999999999 9999999999999 67
Q ss_pred cCccccccc--------c------------------------------------chhhccCCceeEeE-eecCccccccc
Q psy17692 82 CIVPKELYC--------P------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEE 116 (211)
Q Consensus 82 ~g~pv~~~~--------~------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~d 116 (211)
+|.|+.+++ + +++.+|++++++++ +.+|+||+ +|
T Consensus 193 ~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~G~yg~-~~ 271 (318)
T 1y6j_A 193 AGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGI-ED 271 (318)
T ss_dssp TTBCSCCC-----------CCHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHTCCCEECCEEEECSBTTB-CS
T ss_pred CCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhhCCCccHHHHHHHHHHHHHHHHcCCCcEEEEEEeecCccCC-cc
Confidence 777765542 1 45778888999998 68999999 89
Q ss_pred eEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 117 VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 117 V~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+|+|+||+||++|+..+++..|+++|++.|..|++.+++..+.+
T Consensus 272 ~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 315 (318)
T 1y6j_A 272 VAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEV 315 (318)
T ss_dssp EEEECCEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888776543
No 18
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=99.94 E-value=2.3e-27 Score=211.06 Aligned_cols=142 Identities=20% Similarity=0.276 Sum_probs=122.5
Q ss_pred chhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccccc
Q psy17692 9 SSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 9 ~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++|+|+||++ +++
T Consensus 129 ~~~t~~~~k~s~~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~v~G~HG~t~~p~~s~~---------~v~ 195 (326)
T 2zqz_A 129 DILTYATWKLSGFPKNRVVGSG--TSLDTARFR--QSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHA---------NIG 195 (326)
T ss_dssp HHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEEBSSSTTCEECGGGC---------EET
T ss_pred HHHHHHHHHHcCCCHHHEEEcc--ccchHHHHH--HHHHHHhCCChhheEEEEecccCCceEeehhhc---------eEC
Confidence 3344678999999999999999 999999999 99999999999999 9999999999999 666
Q ss_pred Cccccccc-------c------------------------------------chhhccCCceeEeE-eecCccccccceE
Q psy17692 83 IVPKELYC-------P------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVF 118 (211)
Q Consensus 83 g~pv~~~~-------~------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~ 118 (211)
|.|+.+++ + +++.+|++++++++ +.+|+||+ +|+|
T Consensus 196 g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~~kG~t~~~~a~aa~~~~~ai~~~~~~~~~vsv~~~G~yg~-~~~~ 274 (326)
T 2zqz_A 196 GVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVYMDGQYGL-NDIY 274 (326)
T ss_dssp TEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEE
T ss_pred CEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHHcCCCcHHHHHHHHHHHHHHHHhCCCcEEEEEEeccCccCC-CceE
Confidence 66654321 0 45788889999998 68999999 5999
Q ss_pred eeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccceee
Q psy17692 119 LSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLPCVM 164 (211)
Q Consensus 119 ~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP~vl 164 (211)
+|+||+||++|+.++++..|+++|++.|..|++.+++..+.+-..+
T Consensus 275 ~svP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~ 320 (326)
T 2zqz_A 275 IGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFAKN 320 (326)
T ss_dssp EEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999988888876553333
No 19
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=99.94 E-value=1.6e-27 Score=213.75 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=116.4
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeeccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVSSR 79 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il~~ 79 (211)
.|++.-+.+||.+|||++|||| | |.|||+||+ ++||+++|++|++| ||||+|+|+||++
T Consensus 128 Pvd~~t~i~~k~sg~p~~rv~g-~--t~LDs~R~~--~~la~~l~v~~~~v~~~~ViGeHgds~vp~~S~a--------- 193 (343)
T 3fi9_A 128 PADITGLVTLIYSGLKPSQVTT-L--AGLDSTRLQ--SELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTA--------- 193 (343)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEE-E--CCHHHHHHH--HHHHHHHTSCGGGEECCCEEESSGGGEEECGGGC---------
T ss_pred chHHHHHHHHHHcCCCcceEEE-e--cCcHHHHHH--HHHHHHhCcCHHHcccceEEEcCCCceeeeeecc---------
Confidence 3455667789999999999997 5 899999999 99999999999887 9999999999999
Q ss_pred cccCccccccc-----c--------------------------------------chhhccCCceeEeE-eecCcccccc
Q psy17692 80 KNCIVPKELYC-----P--------------------------------------EIEDREQDRRKPAI-HLLGHHGIEE 115 (211)
Q Consensus 80 ~v~g~pv~~~~-----~--------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~ 115 (211)
+++|+|+.+++ . +++.+|+++++|++ +++|+| + +
T Consensus 194 ~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kg~ss~~s~A~a~~~~~~ail~d~~~v~~~s~~~~g~~-~-~ 271 (343)
T 3fi9_A 194 KVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGRSSFQSPSYVSIEMIRAAMGGEAFRWPAGCYVNVPG-F-E 271 (343)
T ss_dssp EETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSSCCCSCEEEEEEETT-E-E
T ss_pred eECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHccCCCcHHhHHHHHHHHHHHHHhCCCceEEEEEEEeCCC-c-C
Confidence 88888887653 1 35678888999988 788764 6 7
Q ss_pred ceEeeeceEEecceEEEEecCC--CCHHHHHHHHhhHHhHHhhhc
Q psy17692 116 EVFLSLPCVMADNGVTHIVNQP--LTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 116 dV~~s~P~vig~~GV~~Ive~i--LsdeE~~iL~~Sa~~l~~~~~ 158 (211)
|+|+|+||+||++|+..+ +.. |+++|++.|..|++.+++..+
T Consensus 272 ~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~~~~ 315 (343)
T 3fi9_A 272 HIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLAKLRD 315 (343)
T ss_dssp EEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999976 444 899999999999988877665
No 20
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=99.94 E-value=1.8e-27 Score=210.16 Aligned_cols=138 Identities=23% Similarity=0.240 Sum_probs=121.7
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++|+|+||.+ ++
T Consensus 119 v~~~t~~~~k~s~~p~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~v~G~HG~t~~p~~s~~---------~v 185 (310)
T 2xxj_A 119 VDVMTQVAYALSGLPPGRVVGSG--TILDTARFR--ALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSA---------QV 185 (310)
T ss_dssp HHHHHHHHHHHHTCCGGGEEECT--THHHHHHHH--HHHHHHHTSCGGGEEEEEEBCSSTTCEEEEEEE---------EE
T ss_pred hHHHHHHHHHHcCCCHHHEEecC--cchhHHHHH--HHHHHHhCcCHHHeEEEEecccCCccccchhhc---------cC
Confidence 34444678999999999999999 999999999 99999999999999 9999999999999 66
Q ss_pred cCccccccc-------c-------------------------------------chhhccCCceeEeE-eecCccccccc
Q psy17692 82 CIVPKELYC-------P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEE 116 (211)
Q Consensus 82 ~g~pv~~~~-------~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~d 116 (211)
+|.|+.+++ + +++.+|++++++++ +.+|+||+ +|
T Consensus 186 ~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~~~~ai~~~~~~~~~vs~~~~G~yg~-~~ 264 (310)
T 2xxj_A 186 GGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAGV-LE 264 (310)
T ss_dssp TTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEETTE-EE
T ss_pred CCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhccCCcHHHHHHHHHHHHHHHHcCCCCEEEEEEEEcCccCC-cc
Confidence 666664431 1 45788889999998 68999999 89
Q ss_pred eEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcc
Q psy17692 117 VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLS 159 (211)
Q Consensus 117 V~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~s 159 (211)
+|+|+||+||++|+.++++..|+++|++.|..|++.+++..+.
T Consensus 265 ~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~ 307 (310)
T 2xxj_A 265 VSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEAAFA 307 (310)
T ss_dssp EEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888876653
No 21
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=99.94 E-value=7.6e-28 Score=214.90 Aligned_cols=147 Identities=24% Similarity=0.328 Sum_probs=119.6
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccc-c
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSR-K 80 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~-~ 80 (211)
|+..-+.+||.+|||++||||+| |.||++||+ ++||+++|+++++| ||||+|+|+||+. ....+..+ .
T Consensus 141 vdi~t~~~~k~sg~p~~rViG~g--t~LDs~R~~--~~lA~~lgv~~~~V~~~V~G~Hg~t~vp~~S~~-~~~~~~~~v~ 215 (330)
T 3ldh_A 141 GTDKNKQDWKLSGLPMHRIIGSG--CNLDSARFR--YLMGERLGVHSCLVIGWVIGQHGDSVPSVWSGM-WDAKLHKDVV 215 (330)
T ss_dssp HHHHHHHHHHHHCCCGGGEECCT--THHHHHHHH--HHHHHHHTSCTTTCCEEECSSSSTTCCEEEEEE-EETTEEHHHH
T ss_pred cHHHHHHHHHHhCCCHHHeeccc--CchhHHHHH--HHHHHHhCCCHHHeEEEEEcCCCCceeeechhh-HHHHHHHHHH
Confidence 44455678999999999999999 999999999 99999999999999 9999999999972 21111111 0
Q ss_pred ccC-------------------ccccccc------------cchhhccCCceeEeE-eecCccccccceEeeeceEEecc
Q psy17692 81 NCI-------------------VPKELYC------------PEIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVMADN 128 (211)
Q Consensus 81 v~g-------------------~pv~~~~------------~~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vig~~ 128 (211)
.+| .|++.+. .+++++|+++++|++ +++|+||+.+|+|+|+||++| +
T Consensus 216 ~~g~eii~~kg~t~~a~a~~~~~~~~~~~~~~~~~~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~ 294 (330)
T 3ldh_A 216 DSAYEVIKLKGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLSLPCVLN-N 294 (330)
T ss_dssp HCCCTTSTTCHHHHHHHHHTTHHHHTTSSSCSCTHHHHHHHHHHHHHTCCEEECCBCCCSSSSSCCSCCCCBCCEEEB-T
T ss_pred HHHHHHHHccCCcceeeeeeccCccchhhhhhhHHHHHHHHHHHHHcCCCceEEEEeecCCccCCCCceEEEEEEEEC-C
Confidence 011 0111110 067889999999999 799999995599999999999 9
Q ss_pred eEEE--EecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 129 GVTH--IVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 129 GV~~--Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+.+ ++++.|+++|++.|..|++.+++.++++
T Consensus 295 Gv~~~~iv~~~L~~~E~~~l~~s~~~l~~~~~~~ 328 (330)
T 3ldh_A 295 GISHCNIVKMKLKPDEEQQLQKSATTLWDIQKDL 328 (330)
T ss_dssp TBCTTCCCCCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEcceecCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999 9999999999999999999998887654
No 22
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=99.94 E-value=1.1e-26 Score=204.93 Aligned_cols=140 Identities=16% Similarity=0.201 Sum_probs=123.3
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
.|+..-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||++ +
T Consensus 124 Pv~~~t~~~~k~~~~p~~rviG~g--t~LD~~r~~--~~la~~lgv~~~~v~~~v~G~Hg~~~~p~~s~~---------~ 190 (313)
T 1hye_A 124 PVDVMTYKALVDSKFERNQVFGLG--THLDSLRFK--VAIAKFFGVHIDEVRTRIIGEHGDSMVPLLSAT---------S 190 (313)
T ss_dssp SHHHHHHHHHHHHCCCTTSEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEEECSSTTEEECGGGC---------E
T ss_pred cHHHHHHHHHHhhCcChhcEEEeC--ccHHHHHHH--HHHHHHhCcCHHHeEEEEeeccCCcccceeecc---------c
Confidence 445555778999999999999999 999999999 99999999999999 9999999999999 6
Q ss_pred ccCccccccc--c-------------------------------------chhhccCCceeEeE-eecCcc-ccccceEe
Q psy17692 81 NCIVPKELYC--P-------------------------------------EIEDREQDRRKPAI-HLLGHH-GIEEEVFL 119 (211)
Q Consensus 81 v~g~pv~~~~--~-------------------------------------~~i~~d~~~i~~vs-~l~G~y-Gi~~dV~~ 119 (211)
++|.|+.+++ + +++.+|++++++++ +.+|+| |+ +|+|+
T Consensus 191 v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kgs~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~~g~-~~~~~ 269 (313)
T 1hye_A 191 IGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGI-RDVCI 269 (313)
T ss_dssp ETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC------CCHHHHHHHHHHHHHTTCCEEEEEEEEEESSSSSC-EEEEE
T ss_pred cCCEEHHHHhcCCHHHHHHHHHHHHhccceeecCCCCcHHHHHHHHHHHHHHHHcCCCeEEEEEEeecceecCc-cceEE
Confidence 6666665542 1 45788888999998 689999 99 89999
Q ss_pred eeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 120 SLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 120 s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+||+||++|+.++++..|+++|++.|..|++.+++.++.+
T Consensus 270 ~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 310 (313)
T 1hye_A 270 GVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYCEEV 310 (313)
T ss_dssp EEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888776543
No 23
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=99.94 E-value=4.2e-27 Score=210.13 Aligned_cols=140 Identities=11% Similarity=0.021 Sum_probs=114.8
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeeccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVSSR 79 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il~~ 79 (211)
.|++.-+.+||.+|++|+|+||+| |.|||+||+ ++||+++|++|++| ||||+|||+||++.+
T Consensus 131 Pvd~~t~~~~~~~~~~p~~~ig~~--t~LDs~R~~--~~la~~l~v~~~~v~~~vV~GeHgds~vp~~S~a~v------- 199 (333)
T 5mdh_A 131 PANTNCLTASKSAPSIPKENFSCL--TRLDHNRAK--AQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKV------- 199 (333)
T ss_dssp SHHHHHHHHHHTCTTSCGGGEEEC--CHHHHHHHH--HHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEE-------
T ss_pred chHHHHHHHHHHcCCCCcCEEEEE--EhHHHHHHH--HHHHHHhCcCHHHeeecEEEEcCCCCEEEeeeccEe-------
Confidence 456666788999976666678999 999999999 99999999999988 999999999999943
Q ss_pred cccCcccc--ccc-----------c-----------------------------chhhccC--CceeEeE-eecC-cccc
Q psy17692 80 KNCIVPKE--LYC-----------P-----------------------------EIEDREQ--DRRKPAI-HLLG-HHGI 113 (211)
Q Consensus 80 ~v~g~pv~--~~~-----------~-----------------------------~~i~~d~--~~i~~vs-~l~G-~yGi 113 (211)
.++|.|+. +++ . +.+.+|+ ++++|++ +++| +||+
T Consensus 200 ~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k~~ssa~~~a~~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi 279 (333)
T 5mdh_A 200 KLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGV 279 (333)
T ss_dssp ECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSC
T ss_pred ccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEecCCcccCC
Confidence 13555432 111 0 2345554 5799999 6899 9999
Q ss_pred ccceEeeeceEEecceEEEEec-CCCCHHHHHHHHhhHHhHHhhhc
Q psy17692 114 EEEVFLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 114 ~~dV~~s~P~vig~~GV~~Ive-~iLsdeE~~iL~~Sa~~l~~~~~ 158 (211)
.+|+|+|+||++ ++|+.++++ +.|+++|++.|..|++.+++..+
T Consensus 280 ~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~l~~sa~~L~~~~~ 324 (333)
T 5mdh_A 280 PDDLLYSFPVTI-KDKTWKIVEGLPINDFSREKMDLTAKELAEEKE 324 (333)
T ss_dssp CSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 669999999999 999999997 99999999999999988776643
No 24
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.93 E-value=8.4e-27 Score=205.28 Aligned_cols=139 Identities=20% Similarity=0.291 Sum_probs=120.4
Q ss_pred hHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccCcc
Q psy17692 12 KNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCIVP 85 (211)
Q Consensus 12 ~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g~p 85 (211)
-+.++|.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||.+ +++|.|
T Consensus 125 ~~~~~~~~~~~~~rviG~g--t~ld~~r~~--~~la~~l~v~~~~v~~~v~G~Hg~~~~p~~s~~---------~v~g~~ 191 (310)
T 1guz_A 125 THVAWVRSGLPKERVIGMA--GVLDAARFR--SFIAMELGVSMQDINACVLGGHGDAMVPVVKYT---------TVAGIP 191 (310)
T ss_dssp HHHHHHHHCSCGGGEEEEC--HHHHHHHHH--HHHHHHHTCCGGGEECCEEECSGGGEEECGGGC---------EETTEE
T ss_pred HHHHHHhcCCChHHEEECC--CchHHHHHH--HHHHHHhCCCHHHeEEEEEcccCCcEeeeeecc---------cCCCEE
Confidence 3467899999999999999 999999999 99999999999998 9999999999999 555655
Q ss_pred cccccc---------------------------------------chhhccCCceeEeE-eecCccccccceEeeeceEE
Q psy17692 86 KELYCP---------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVM 125 (211)
Q Consensus 86 v~~~~~---------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vi 125 (211)
+.+++. +++.+|++++++++ +.+|+||+ +|+|+|+||+|
T Consensus 192 ~~~~~~~~~~~~~~~~v~~~g~~ii~~~~kgs~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~~i 270 (310)
T 1guz_A 192 ISDLLPAETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKL 270 (310)
T ss_dssp HHHHSCHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEE
T ss_pred HHHHCCHHHHHHHHHHHHHhHHHHHhhcCCCCcHHHHHHHHHHHHHHHHcCCCcEEEEEEeecCccCC-cceEEEEEEEE
Confidence 544321 45677888999997 68999999 89999999999
Q ss_pred ecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccceee
Q psy17692 126 ADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLPCVM 164 (211)
Q Consensus 126 g~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP~vl 164 (211)
|++|+.++++..|+++|++.|..|++.+++..+.+...|
T Consensus 271 g~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~~~~~ 309 (310)
T 1guz_A 271 GRNGVEQIYEINLDQADLDLLQKSAKIVDENCKMLESTI 309 (310)
T ss_dssp ETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999988887665544
No 25
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.93 E-value=1.2e-26 Score=205.94 Aligned_cols=137 Identities=18% Similarity=0.240 Sum_probs=120.5
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
++..-+.+++.+||||+||||+| |.|||+||+ ++||+++|+++++| +||++++|+||.+ ++
T Consensus 129 ~~~~t~~~~~~~g~~~~rviG~g--t~ld~~R~~--~~la~~lgv~~~~v~~~v~G~HG~~~~p~~s~~---------~v 195 (322)
T 1t2d_A 129 VDVMVQLLHQHSGVPKNKIIGLG--GVLDTSRLK--YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYI---------TV 195 (322)
T ss_dssp HHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTSCGGGEECCEEBCSSTTCEECGGGC---------EE
T ss_pred hHHHHHHHHHhcCCChHHEEecc--CcccHHHHH--HHHHHHhCCCHHHeEEEEEcCCCCcEEeeHHHc---------eE
Confidence 34445678899999999999999 999999999 99999999999999 9999999999999 66
Q ss_pred cCccccccc-----c-------------------------------------chhhccCCceeEeE-eecCccccccceE
Q psy17692 82 CIVPKELYC-----P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVF 118 (211)
Q Consensus 82 ~g~pv~~~~-----~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~ 118 (211)
+|.|+.+|+ + +++.+|++++++++ +.+|+||+ +|+|
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kgs~~~~~a~a~~~~~~ai~~~~~~v~~~s~~~~g~~g~-~~~~ 274 (322)
T 1t2d_A 196 GGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGH-SDIF 274 (322)
T ss_dssp TTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEE
T ss_pred CcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHhCCCCEEEEEEEecCccCC-CceE
Confidence 666654431 1 45788889999998 68999999 8999
Q ss_pred eeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhc
Q psy17692 119 LSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 119 ~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~ 158 (211)
+|+||+||++|+.++++..|+++|++.|..|++.+++..+
T Consensus 275 ~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~L~~~~~ 314 (322)
T 1t2d_A 275 GGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKA 314 (322)
T ss_dssp EEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCeeEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988876643
No 26
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.92 E-value=5.4e-26 Score=202.26 Aligned_cols=139 Identities=17% Similarity=0.307 Sum_probs=120.3
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKN 81 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v 81 (211)
++..-+.+++.+||||+||||+| |+|||+||+ ++||+++|+++++| +||++++|+||.+ ++
T Consensus 135 ~~~~t~~~~~~~~~~~~rviG~g--t~LD~~R~~--~~la~~lgv~~~~v~~~v~G~Hg~~~~p~~s~~---------~v 201 (331)
T 1pzg_A 135 LDCMVKVMCEASGVPTNMICGMA--CMLDSGRFR--RYVADALSVSPRDVQATVIGTHGDCMVPLVRYI---------TV 201 (331)
T ss_dssp HHHHHHHHHHHHCCCGGGEEECC--HHHHHHHHH--HHHHHHHTSCGGGEECCEEBCSSTTCEECGGGC---------EE
T ss_pred hHHHHHHHHHhcCCChhcEEecc--chHHHHHHH--HHHHHHhCCCHHHceEEEecCCCCCEeeeeecc---------eE
Confidence 44445678899999999999999 999999999 99999999999999 9999999999999 44
Q ss_pred cCcccccc------------------------------------cc--------chhhccCCceeEeE-eecCccccccc
Q psy17692 82 CIVPKELY------------------------------------CP--------EIEDREQDRRKPAI-HLLGHHGIEEE 116 (211)
Q Consensus 82 ~g~pv~~~------------------------------------~~--------~~i~~d~~~i~~vs-~l~G~yGi~~d 116 (211)
+|.|+.++ .. +++.+|++++++++ +.+|+||+ +|
T Consensus 202 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~eii~~~~kgst~~~~a~a~~~ii~ai~~~~~~~~~~~v~~~G~~g~-~~ 280 (331)
T 1pzg_A 202 NGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL-KD 280 (331)
T ss_dssp TTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EE
T ss_pred CCEEHHHHhhcccCCHHHHHHHHHHHHhccHHHHHhhcCCCccchHHHHHHHHHHHHHhCCCcEEEEEEEecCccCC-Cc
Confidence 44444332 10 45778888999998 68999999 89
Q ss_pred eEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 117 VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 117 V~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+|+|+||+||++|+..+++..|+++|++.|..|++.+++..+.+
T Consensus 281 ~~~~vP~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 324 (331)
T 1pzg_A 281 MFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALNKAV 324 (331)
T ss_dssp EEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888776543
No 27
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.92 E-value=7.4e-26 Score=201.18 Aligned_cols=140 Identities=16% Similarity=0.216 Sum_probs=120.7
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
+++..-+.+++.+||||+||||+| |.|||+||+ ++||+++|+++++| +||++++|+||.+ +
T Consensus 133 P~~~~t~~~~~~~~~~~~rviG~~--t~Ld~~R~~--~~la~~lgv~~~~v~~~v~G~Hg~t~~p~~s~~---------~ 199 (328)
T 2hjr_A 133 PLDAMVYYFKEKSGIPANKVCGMS--GVLDSARFR--CNLSRALGVKPSDVSAIVVGGHGDEMIPLTSSV---------T 199 (328)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEESC--HHHHHHHHH--HHHHHHHTSCGGGEECCEEBCSSTTCEECGGGC---------E
T ss_pred chHHHHHHHHHhcCCChhhEEEeC--cHHHHHHHH--HHHHHHhCCCHHHeeEEEecCCCCceeeeeeec---------e
Confidence 344455778899999999999999 999999999 99999999999999 9999999999998 4
Q ss_pred ccCcccccc------------------------------------cc--------chhhccCCceeEeE-eecCcccccc
Q psy17692 81 NCIVPKELY------------------------------------CP--------EIEDREQDRRKPAI-HLLGHHGIEE 115 (211)
Q Consensus 81 v~g~pv~~~------------------------------------~~--------~~i~~d~~~i~~vs-~l~G~yGi~~ 115 (211)
++|.|+.++ .. +++.+|++++++++ +.+|+||+ +
T Consensus 200 v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~~~gs~~~~~a~a~~~i~~ai~~~~~~v~~~~v~~~G~~g~-~ 278 (328)
T 2hjr_A 200 IGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELLKTGSAFYAPAASAVAMAQAYLKDSKSVLVCSTYLTGQYNV-N 278 (328)
T ss_dssp ETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-E
T ss_pred ECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhhCCCchHHHHHHHHHHHHHHHHcCCCcEEEEEEeecCccCC-C
Confidence 444444332 10 45778888999998 68999999 8
Q ss_pred ceEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 116 EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 116 dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+|+|+||+||++|+..+++..|+++|++.|..|++.+++..+.+
T Consensus 279 ~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 323 (328)
T 2hjr_A 279 NLFVGVPVVIGKNGIEDVVIVNLSDDEKSLFSKSVESIQNLVQDL 323 (328)
T ss_dssp EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888776543
No 28
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=99.92 E-value=6.4e-26 Score=203.49 Aligned_cols=137 Identities=9% Similarity=0.054 Sum_probs=109.7
Q ss_pred ceechhhHHHHHH-hCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeeccccccccccc
Q psy17692 6 KTVSSRKNCIVRK-ELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVS 77 (211)
Q Consensus 6 ~~~~~~~~~~~k~-sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il 77 (211)
..|++.-+.+||. +|+|++|+||+| |.||++||+ ++||+++|++|++| |||++|+|+||++
T Consensus 151 NPvd~~~~i~~~~~~g~~~~r~i~~~--t~LDs~R~~--~~la~~~~v~~~~V~~~~V~G~HG~t~vp~~s~a------- 219 (345)
T 4h7p_A 151 NPANTNALILLKSAQGKLNPRHVTAM--TRLDHNRAL--SLLARKAGVPVSQVRNVIIWGNHSSTQVPDTDSA------- 219 (345)
T ss_dssp SSHHHHHHHHHHHTTTCSCGGGEEEC--CHHHHHHHH--HHHHHHHTSCGGGEECCEEEBCSSTTCEEECTTC-------
T ss_pred CCcchHHHHHHHHccCCCCcceeeec--cchhHHHHH--HHHHHHHCcChhheecceeecCCCCeEEeeeccc-------
Confidence 3456666778874 699999999999 999999999 99999999999998 9999999999999
Q ss_pred cccccCcccccccc---------------------------------------chhhccCCceeEeE---ee-cCccccc
Q psy17692 78 SRKNCIVPKELYCP---------------------------------------EIEDREQDRRKPAI---HL-LGHHGIE 114 (211)
Q Consensus 78 ~~~v~g~pv~~~~~---------------------------------------~~i~~d~~~i~~vs---~l-~G~yGi~ 114 (211)
+++|.|+.+++. +++.++++.+.++| +. +|+||+.
T Consensus 220 --~v~g~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~kg~ss~~s~a~a~~~~~~~~l~~~~~~~~vs~~v~s~~g~YGi~ 297 (345)
T 4h7p_A 220 --VIGTTPAREAIKDDALDDDFVQVVRGRGAEIIQLRGLSSAMSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVP 297 (345)
T ss_dssp --EETTEEGGGGCCC------HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCTTCCC
T ss_pred --eECCccHHHhcchhhHHHHHHHHHHhhhhhhhhcCCCcchhhHHHHHHHHHHHHhcCCCCceEEEEEEEeCCCCcCCC
Confidence 888888876654 23566666666666 22 6899997
Q ss_pred cceEeeeceEEecceEEEEec-CCCCHHHHHHHHhhHHhHHhh
Q psy17692 115 EEVFLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKEV 156 (211)
Q Consensus 115 ~dV~~s~P~vig~~GV~~Ive-~iLsdeE~~iL~~Sa~~l~~~ 156 (211)
+|+|+|+||++| +|..++++ ..|+|+|+++|..|++.+++-
T Consensus 298 ~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E 339 (345)
T 4h7p_A 298 SGLIFSFPCTCH-AGEWTVVSGKLNGDLGKQRLASTIAELQEE 339 (345)
T ss_dssp SSCEEEEEEEEE-TTEEEECCSCC-----CGGGHHHHHHHHHH
T ss_pred CCEEEEEEEEEe-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 899999999998 57777775 788999999999999777653
No 29
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.91 E-value=7e-25 Score=193.70 Aligned_cols=135 Identities=20% Similarity=0.287 Sum_probs=120.8
Q ss_pred hHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccCcc
Q psy17692 12 KNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCIVP 85 (211)
Q Consensus 12 ~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g~p 85 (211)
-+.+++.+|||++||||+| |.||++||+ ++||+++|+++++| +||++++|+||.+ +++|.|
T Consensus 123 ~~~~~~~~~~~~~rviG~~--t~ld~~r~~--~~la~~lgv~~~~v~~~v~G~hg~~~~p~~s~~---------~v~G~~ 189 (319)
T 1a5z_A 123 TYFFLKESGMDPRKVFGSG--TVLDTARLR--TLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGA---------MIGGIP 189 (319)
T ss_dssp HHHHHHHHTCCTTTEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEEBCSSTTCEECGGGC---------EETTEE
T ss_pred HHHHHHHhCCChhhEEeeC--ccHHHHHHH--HHHHHHhCcCHHHceEEEEeCCCCCcccchhhc---------eECCEE
Confidence 3567799999999999999 999999999 99999999999999 9999999999999 777777
Q ss_pred ccccc------c-------------------------------------chhhccCCceeEeE-eecCccccccceEeee
Q psy17692 86 KELYC------P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSL 121 (211)
Q Consensus 86 v~~~~------~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~ 121 (211)
+.+|+ + +++.+|++++++++ +.+|+||+ +|+|+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~v 268 (319)
T 1a5z_A 190 LQNMCQVCQKCDSKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV-KDLCISV 268 (319)
T ss_dssp HHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEESSBTTB-CSEEEEE
T ss_pred HHHHhhcccccCHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHHHHHhCCCCEEEEEEEecCccCc-cceEEEE
Confidence 65542 1 35788888999999 68999999 8999999
Q ss_pred ceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 122 PCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 122 P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
||+||++|+..+++..|+++|++.|..|++.+++.++.+
T Consensus 269 P~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 307 (319)
T 1a5z_A 269 PVTLGKHGVERILELNLNEEELEAFRKSASILKNAINEI 307 (319)
T ss_dssp EEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998888876644
No 30
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.91 E-value=5.8e-25 Score=193.84 Aligned_cols=149 Identities=17% Similarity=0.255 Sum_probs=118.8
Q ss_pred echhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccc--ccccccc
Q psy17692 8 VSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRP--ERTVSSR 79 (211)
Q Consensus 8 ~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i--~~~il~~ 79 (211)
++.--+.++|.+||||+||||+| |.||++||+ ++||+++|+++++| +||++|+|+||...- .+.+...
T Consensus 128 ~~~~t~~~~~~~~~p~~rviG~g--t~Ld~~R~~--~~la~~lgv~~~~v~~~v~G~Hg~s~~p~~s~~~~~~~~~~~~~ 203 (303)
T 2i6t_A 128 VEIMTYVTWKLSTFPANRVIGIG--CNLDSQRLQ--YIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQ 203 (303)
T ss_dssp HHHHHHHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHTSCCTTGGGGEEEEBSCSSSCEEEEBCSSCCCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHeeCCC--CCchHHHHH--HHHHHHcCCChHHeEEEEecCCCCCccccccccccccHHHHHHH
Confidence 34444678999999999999999 999999999 99999999999999 999999999999721 0111100
Q ss_pred -------cccCcccccccc--------chhhccCCceeEeE-eecCccccccceEeeeceEEecceEEEEecC-CCCHHH
Q psy17692 80 -------KNCIVPKELYCP--------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVMADNGVTHIVNQ-PLTQEE 142 (211)
Q Consensus 80 -------~v~g~pv~~~~~--------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vig~~GV~~Ive~-iLsdeE 142 (211)
-+.+..-..|.+ +++.+|++++++++ +.+|+||+.+|+|+|+||+||++|+.++++. .|+++|
T Consensus 204 ~~~~g~eii~~kGst~~~~a~a~~~i~~ai~~~~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e 283 (303)
T 2i6t_A 204 LSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTV 283 (303)
T ss_dssp HHHHHHTTSSSCCCCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHH
T ss_pred HHHHHHHHHHccCchHHhHHHHHHHHHHHHHcCCCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHH
Confidence 011111122211 67899999999998 6899999966999999999999999999998 789999
Q ss_pred HHHHHhhHHhHHhhhccc
Q psy17692 143 IEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 143 ~~iL~~Sa~~l~~~~~sv 160 (211)
++.|..|++.+++.++.+
T Consensus 284 ~~~l~~s~~~l~~~~~~~ 301 (303)
T 2i6t_A 284 TEKLQSSASSIHSLQQQL 301 (303)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999998888776543
No 31
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=99.90 E-value=5.5e-24 Score=188.50 Aligned_cols=143 Identities=14% Similarity=0.094 Sum_probs=110.5
Q ss_pred echhhHH---HHHHhCC-CCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cC-CCceeeeccccc---cc
Q psy17692 8 VSSRKNC---IVRKELY-RPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SS-GKSCIVRKELYR---PE 73 (211)
Q Consensus 8 ~~~~~~~---~~k~sg~-p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eH-Gds~vp~~S~~~---i~ 73 (211)
|++.-+. +||.+|+ |++||||+ |.||++||+ ++||+++|+++++| || |++|+|+||++. +.
T Consensus 121 vd~~t~~a~~~~k~sg~~p~~rv~G~---~~LD~~R~~--~~la~~lgv~~~~v~~~V~G~Hsg~t~vp~~S~~~g~~~~ 195 (312)
T 3hhp_A 121 VNTTVAIAAEVLKKAGVYDKNKLFGV---TTLDIIRSN--TFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFT 195 (312)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTSEEEC---CHHHHHHHH--HHHHHHHTCCGGGCCCCEEECSSGGGEEECGGGCTTCCCC
T ss_pred chhHHHHHHHHHHHcCCCCcceEEEE---echhHHHHH--HHHHHHhCcChhHcceeEEeccCCCceeeecccCCCCCCC
Confidence 3444455 7999998 99999999 599999999 99999999999999 99 999999999871 10
Q ss_pred cc----cccc-cccCc---------ccccccc--------chh---hccCCceeEeEeecCccccccceEeeeceEEecc
Q psy17692 74 RT----VSSR-KNCIV---------PKELYCP--------EIE---DREQDRRKPAIHLLGHHGIEEEVFLSLPCVMADN 128 (211)
Q Consensus 74 ~~----il~~-~v~g~---------pv~~~~~--------~~i---~~d~~~i~~vs~l~G~yGi~~dV~~s~P~vig~~ 128 (211)
.. +..+ ..+|. --+.|.. +++ .+|+++++|+++++|+ |. .++|+|+|+++|++
T Consensus 196 ~~~~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~ai~~~l~~~~~v~~~s~~~g~-g~-~~v~~s~P~~~g~~ 273 (312)
T 3hhp_A 196 EQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGD-GQ-YARFFSQPLLLGKN 273 (312)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECC-CS-SCSEEEEEEEEETT
T ss_pred HHHHHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHHHHHHHcCCCCceEEEEEecCC-CC-cceEEEeEEEEeCC
Confidence 00 0000 00110 0111111 345 6788899999988877 55 68899999999999
Q ss_pred eEEEEecC-CCCHHHHHHHHhhHHhHHhhh
Q psy17692 129 GVTHIVNQ-PLTQEEIEKLKKSAQAIKEVF 157 (211)
Q Consensus 129 GV~~Ive~-iLsdeE~~iL~~Sa~~l~~~~ 157 (211)
|+.++++. .|+++|++.|..|++.+++.+
T Consensus 274 Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~i 303 (312)
T 3hhp_A 274 GVEERKSIGTLSAFEQNALEGMLDTLKKDI 303 (312)
T ss_dssp EEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999998877654
No 32
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=99.90 E-value=5.2e-24 Score=187.11 Aligned_cols=152 Identities=20% Similarity=0.235 Sum_probs=101.1
Q ss_pred HHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccCccc
Q psy17692 13 NCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCIVPK 86 (211)
Q Consensus 13 ~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g~pv 86 (211)
+.+++.+ |++||||+| |.||++||+ +++|+++|+++++| +||++|+|+||++ +++|.|+
T Consensus 124 ~~~~~~~--~~~rviG~g--t~Ld~~r~~--~~la~~l~v~~~~v~~~v~G~Hg~~~~p~~s~~---------~v~g~~~ 188 (304)
T 2v6b_A 124 DLATQLA--PGQPVIGSG--TVLDSARFR--HLMAQHAGVDGTHAHGYVLGEHGDSEVLAWSSA---------MVAGMPV 188 (304)
T ss_dssp HHHHHHS--CSSCEEECT--THHHHHHHH--HHHHHHHTSCGGGEECCEEESSSTTEEECGGGC---------EETTEEH
T ss_pred HHHHHhC--ChhcEEeCC--cCchHHHHH--HHHHHHhCcCHHHceEEEecCCCCceeeehhHc---------cCCCEEH
Confidence 4467777 999999999 999999999 99999999999999 9999999999999 8888887
Q ss_pred cccccc------------hhhccCCceeEeEeecC--ccccccceEeeeceEEecceEEEEecCCCCHHHHHHHHhhH--
Q psy17692 87 ELYCPE------------IEDREQDRRKPAIHLLG--HHGIEEEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSA-- 150 (211)
Q Consensus 87 ~~~~~~------------~i~~d~~~i~~vs~l~G--~yGi~~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa-- 150 (211)
.+++++ .+.+-+++.+.+...+| .|+++ .++.++++++++|+ ++.+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~kg~t~~~~a-------------~a~~~~~~ai~~~~-~~~~~~~~~~ 254 (304)
T 2v6b_A 189 ADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGKRATYYGIG-------------AALARITEAVLRDR-RAVLTVSAPT 254 (304)
T ss_dssp HHHHHHHTCCCSHHHHHHHHHHHTC-----------CCHHHH-------------HHHHHHHHHHHTTC-CEEEEEEEEE
T ss_pred HHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhccCCcHHHHH-------------HHHHHHHHHHHhCC-CcEEEEEEEE
Confidence 665210 01111123444443444 34554 55566666666664 56666665
Q ss_pred HhHHhhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 151 QAIKEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 151 ~~l~~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
++ |+.+-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 255 ~g-yg~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 297 (304)
T 2v6b_A 255 PE-YGVSLSLPRVVGRQGVLSTLHPKLTGDEQQKLEQSAGVLRG 297 (304)
T ss_dssp TT-TTEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_pred CC-cCcEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 55 55555666666666666666666666666666666666654
No 33
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.89 E-value=3.5e-24 Score=190.09 Aligned_cols=135 Identities=10% Similarity=0.056 Sum_probs=115.3
Q ss_pred hhHHHHHHh-CCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeecccccccccccccccc
Q psy17692 11 RKNCIVRKE-LYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVSSRKNC 82 (211)
Q Consensus 11 ~~~~~~k~s-g~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il~~~v~ 82 (211)
.-+.+++.+ |||++||+|. |.||++||+ +++|+++|+++++| +||++++|+||++ +++
T Consensus 139 ~t~~~~~~~~~~p~~~v~g~---t~Ld~~r~~--~~la~~lgv~~~~v~~~~v~G~Hg~s~~p~~s~~---------~v~ 204 (329)
T 1b8p_A 139 NAYIAMKSAPSLPAKNFTAM---LRLDHNRAL--SQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYA---------QID 204 (329)
T ss_dssp HHHHHHHTCTTSCGGGEEEC---CHHHHHHHH--HHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSC---------EET
T ss_pred HHHHHHHHcCCCCHHHEEEe---ecHHHHHHH--HHHHHHhCcCHHHceEEEEEeccCCcEeeehHHC---------eEC
Confidence 334578888 9999999554 999999999 99999999999987 8999999999999 666
Q ss_pred Ccccccccc----------------------------------------chhhcc-CCceeEeE-eecCccccccceEee
Q psy17692 83 IVPKELYCP----------------------------------------EIEDRE-QDRRKPAI-HLLGHHGIEEEVFLS 120 (211)
Q Consensus 83 g~pv~~~~~----------------------------------------~~i~~d-~~~i~~vs-~l~G~yGi~~dV~~s 120 (211)
|.|+.++++ +++.++ +++++|++ +++|+||+.+|+|+|
T Consensus 205 g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~kg~~~~~~~a~a~~~~~~ai~~~~~~~~~~~s~~~~g~yg~~~~~~~s 284 (329)
T 1b8p_A 205 GASVKDMINDDAWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFG 284 (329)
T ss_dssp TEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEE
T ss_pred CeeHHHHhccchhhHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHhcCCCCcEEEEEEEecCccCCCCCeEEE
Confidence 666533311 345667 78899998 688999997799999
Q ss_pred eceEEecceEEEEec-CCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 121 LPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 121 ~P~vig~~GV~~Ive-~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
+||+| ++|+.++++ +.|+++|++.|..|++.+++..+.+
T Consensus 285 ~P~~i-~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~ 324 (329)
T 1b8p_A 285 FPVTT-ENGEYKIVQGLSIDAFSQERINVTLNELLEEQNGV 324 (329)
T ss_dssp EEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE-cCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999998 9999999999999998888776644
No 34
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=99.88 E-value=4.8e-23 Score=182.04 Aligned_cols=148 Identities=9% Similarity=0.079 Sum_probs=114.9
Q ss_pred CCceechhhHH----------HHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cC-CCceeee
Q psy17692 4 SGKTVSSRKNC----------IVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SS-GKSCIVR 66 (211)
Q Consensus 4 ~~~~~~~~~~~----------~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eH-Gds~vp~ 66 (211)
+++.+..+|++ +++.+|||++||||+ |.||++||+ ++||+++|++|++| || |++++|+
T Consensus 110 ~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~---t~Ld~~r~~--~~la~~l~v~~~~v~~~v~G~H~G~~~~p~ 184 (314)
T 1mld_A 110 DAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGV---TTLDIVRAN--AFVAELKGLDPARVSVPVIGGHAGKTIIPL 184 (314)
T ss_dssp TSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEEC---CHHHHHHHH--HHHHHHTTCCGGGCBCCEEECSSGGGEEEC
T ss_pred CeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEe---ecccHHHHH--HHHHHHhCcChHhEEEEEccCCCCCcEeee
Confidence 35555555543 557789999999999 899999999 99999999999998 99 8999999
Q ss_pred ccccccccccccc-------cc--c---------Ccccccccc--------chhhccC---CceeEeEeecCccccccce
Q psy17692 67 KELYRPERTVSSR-------KN--C---------IVPKELYCP--------EIEDREQ---DRRKPAIHLLGHHGIEEEV 117 (211)
Q Consensus 67 ~S~~~i~~~il~~-------~v--~---------g~pv~~~~~--------~~i~~d~---~~i~~vs~l~G~yGi~~dV 117 (211)
||++.....+..+ ++ + |..-..|.. +++.+|+ ++++++++++|+| . +|+
T Consensus 185 ~s~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~~~~~g~~~v~~~~~~~g~y-~-~~~ 262 (314)
T 1mld_A 185 ISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQE-T-DCP 262 (314)
T ss_dssp GGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCS-S-SSS
T ss_pred cccCCCcccCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHHcCcCCCcceEEEEEeCCcc-C-Cce
Confidence 9998521111000 00 0 111111111 5677774 4799998899999 5 899
Q ss_pred EeeeceEEecceEEEEecC-CCCHHHHHHHHhhHHhHHhhhc
Q psy17692 118 FLSLPCVMADNGVTHIVNQ-PLTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 118 ~~s~P~vig~~GV~~Ive~-iLsdeE~~iL~~Sa~~l~~~~~ 158 (211)
|+|+||+||++|+.+++++ .|+++|++.|..|++.+++..+
T Consensus 263 ~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~~~~ 304 (314)
T 1mld_A 263 YFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIK 304 (314)
T ss_dssp EEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999988877654
No 35
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.88 E-value=5.5e-23 Score=180.94 Aligned_cols=139 Identities=15% Similarity=0.232 Sum_probs=118.1
Q ss_pred eechhhHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeecccccccccccccc
Q psy17692 7 TVSSRKNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRK 80 (211)
Q Consensus 7 ~~~~~~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~ 80 (211)
+++..-+.+++.+|+||+||||++ |.||++|++ +++|+++|+++++| +||++++|.||.+ +
T Consensus 123 p~~~~~~~~~~~~~~~~~rviG~~--t~ld~~r~~--~~la~~lg~~~~~v~~~v~g~Hg~~~~~~~~~a---------~ 189 (317)
T 2ewd_A 123 PLDVMVSHFQKVSGLPHNKVCGMA--GVLDSSRFR--TFIAQHFGVNASDVSANVIGGHGDGMVPATSSV---------S 189 (317)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEESC--HHHHHHHHH--HHHHHHHTSCGGGEECCEEBCSSTTCEECGGGC---------E
T ss_pred hHHHHHHHHHHhhCCCHHHEEecc--CcHHHHHHH--HHHHHHhCcChhhceEEEEecCCCceeEEeecc---------c
Confidence 334445678899999999999999 999999999 99999999999998 9999999999998 3
Q ss_pred ccCcccccc------------------------------------cc--------chhhccCCceeEeE-eecCcccccc
Q psy17692 81 NCIVPKELY------------------------------------CP--------EIEDREQDRRKPAI-HLLGHHGIEE 115 (211)
Q Consensus 81 v~g~pv~~~------------------------------------~~--------~~i~~d~~~i~~vs-~l~G~yGi~~ 115 (211)
++|.|+..+ .. +++.+|+++++|++ +.+|+||+ +
T Consensus 190 v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~g~g~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~G~~g~-~ 268 (317)
T 2ewd_A 190 VGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNLKTGTAYFAPAAAAVKMAEAYLKDKKAVVPCSAFCSNHYGV-K 268 (317)
T ss_dssp ETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHTTCCEEEEEEEEESSSTTC-S
T ss_pred cCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhhcCCchHHHHHHHHHHHHHHHHcCCCeEEEEEEEecCccCC-c
Confidence 333333221 10 45677888999998 68999999 8
Q ss_pred ceEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcc
Q psy17692 116 EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLS 159 (211)
Q Consensus 116 dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~s 159 (211)
|+|+|+||+||++|+..+++..|+++|++.|..|++.+++.++.
T Consensus 269 ~~~~~~P~~i~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~ 312 (317)
T 2ewd_A 269 GIYMGVPTIIGKNGVEDILELDLTPLEQKLLGESINEVNTISKV 312 (317)
T ss_dssp SEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeEEEEcCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888776653
No 36
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.86 E-value=4.6e-22 Score=174.34 Aligned_cols=127 Identities=18% Similarity=0.212 Sum_probs=93.8
Q ss_pred HHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccCccc
Q psy17692 13 NCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCIVPK 86 (211)
Q Consensus 13 ~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g~pv 86 (211)
+.+++.++||++||||+| |.||++||+ +++|+++++++++| +||++++|+||.+ .++|.|+
T Consensus 130 ~~~~~~~~~~~~rvig~g--t~ld~~r~~--~~~a~~l~~~~~~v~~~v~G~hg~~~~~~~s~~---------~v~g~~~ 196 (309)
T 1hyh_A 130 ALFQHVTGFPAHKVIGTG--TLLDTARMQ--RAVGEAFDLDPRSVSGYNLGEHGNSQFVAWSTV---------RVMGQPI 196 (309)
T ss_dssp HHHHHHHCCCGGGEEECT--THHHHHHHH--HHHHHHHTCCGGGCBCCEEBCTTTTCEECTTTC---------EETTEEG
T ss_pred HHHHHhcCCCHHHEeecC--ccchHHHHH--HHHHHHhCCChhheEEEEEeCCCCcEeeccccc---------eECCEEH
Confidence 567888999999999999 999999999 99999999999988 9999999999999 7888888
Q ss_pred ccccc---------------------------------------chhhccCCceeEeE-eecCccccccceEeeeceEEe
Q psy17692 87 ELYCP---------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFLSLPCVMA 126 (211)
Q Consensus 87 ~~~~~---------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~s~P~vig 126 (211)
.+|++ +++.+|++++++++ +.+| +|+|+|+||+||
T Consensus 197 ~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~~~~~~a~a~~~~~~ai~~~~~~~~~~~~~~~g-----~~~~~~vP~~i~ 271 (309)
T 1hyh_A 197 VTLADAGDIDLAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDD-----MGMYLSYPAIIG 271 (309)
T ss_dssp GGC-----CCHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTCCEEEEEEEECTT-----TCSEEEEEEEEE
T ss_pred HHhccCCHHHHHHHHHHHHHhHHHHHhccCCchHHHHHHHHHHHHHHHcCCCcEEEEEEEECC-----CCeEEEEEEEEe
Confidence 77632 23455555556655 3444 355666666666
Q ss_pred cceEEEEecCCCCHHHHHHHHhhHHhHHhhh
Q psy17692 127 DNGVTHIVNQPLTQEEIEKLKKSAQAIKEVF 157 (211)
Q Consensus 127 ~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~ 157 (211)
++|+..+++..|+++|++.|..|++.+++.+
T Consensus 272 ~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~ 302 (309)
T 1hyh_A 272 RDGVLAETTLDLTTDEQEKLLQSRDYIQQRF 302 (309)
T ss_dssp TTEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6666666656666666666666665554443
No 37
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=99.86 E-value=7.6e-22 Score=175.06 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=111.9
Q ss_pred HHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cC-CCceeeeccccccccccccc-------c
Q psy17692 15 IVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SS-GKSCIVRKELYRPERTVSSR-------K 80 (211)
Q Consensus 15 ~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eH-Gds~vp~~S~~~i~~~il~~-------~ 80 (211)
+||.+|||++||||+ |.||++||+ ++||+++|++|++| +| |++++|+||.+.+...+..+ .
T Consensus 139 ~~~~~~~p~~rviG~---~~Ld~~r~~--~~la~~l~v~~~~v~~~v~G~H~G~~~~p~~s~~~v~~~~~~~~~~~~~~~ 213 (326)
T 1smk_A 139 FKKAGTYDPKRLLGV---TMLDVVRAN--TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDR 213 (326)
T ss_dssp HHHHTCCCTTSEEEC---CHHHHHHHH--HHHHHHHTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHH
T ss_pred HHHccCCCcccEEEE---eehHHHHHH--HHHHHHhCcChhheEEEEecccCCceEEEecccCeecCcCCHHHHHHHHHH
Confidence 468999999999999 899999999 99999999999998 99 99999999998653211000 0
Q ss_pred --cc---------Ccccccccc--------chh---hccCCceeEeEeecCccccccceEeeeceEEecceEEEEec-CC
Q psy17692 81 --NC---------IVPKELYCP--------EIE---DREQDRRKPAIHLLGHHGIEEEVFLSLPCVMADNGVTHIVN-QP 137 (211)
Q Consensus 81 --v~---------g~pv~~~~~--------~~i---~~d~~~i~~vs~l~G~yGi~~dV~~s~P~vig~~GV~~Ive-~i 137 (211)
.+ |..-..|.+ ++| .+|+++++++++.+|+|+ +|+|+|+||+||++|+.++++ ..
T Consensus 214 v~~~g~eii~~k~~~gs~~~~~a~a~~~~~~ai~~~~~~~~~v~~~~~~~g~~~--~~~~~~vP~~ig~~Gv~~i~~~~~ 291 (326)
T 1smk_A 214 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVT--ELPFFASKVRLGRNGIEEVYSLGP 291 (326)
T ss_dssp HHHHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHHTCSCEEEEEEEECCSS--SSSEEEEEEEEETTEEEEECCCCC
T ss_pred HHHHHHHHHhcccCCCCcHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeeccccC--CceEEEEEEEEeCCeeEEEcCCCC
Confidence 00 111222321 567 889999999998888865 689999999999999999999 99
Q ss_pred CCHHHHHHHHhhHHhHHhhhc
Q psy17692 138 LTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 138 LsdeE~~iL~~Sa~~l~~~~~ 158 (211)
|+++|++.|..|++.+++.++
T Consensus 292 L~~~e~~~l~~s~~~l~~~~~ 312 (326)
T 1smk_A 292 LNEYERIGLEKAKKELAGSIE 312 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988877654
No 38
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.75 E-value=2.1e-18 Score=152.02 Aligned_cols=131 Identities=9% Similarity=0.055 Sum_probs=112.4
Q ss_pred HHHHHHh-CCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-------cCCCceeeeccccccccccccccccCc
Q psy17692 13 NCIVRKE-LYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-------SSGKSCIVRKELYRPERTVSSRKNCIV 84 (211)
Q Consensus 13 ~~~~k~s-g~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-------eHGds~vp~~S~~~i~~~il~~~v~g~ 84 (211)
+.+++.+ ++||+++.|. |.||+.|++ +++++++|+++..+ +||++++|.|+.+ .++|.
T Consensus 138 ~~~~~~~~~~~p~~~yg~---tkl~~er~~--~~~a~~~g~~~~~vr~~~V~G~h~~~~~~~~~~~---------~~~g~ 203 (327)
T 1y7t_A 138 LIAYKNAPGLNPRNFTAM---TRLDHNRAK--AQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHA---------EVDGR 203 (327)
T ss_dssp HHHHHTCTTSCGGGEEEC---CHHHHHHHH--HHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSC---------EETTE
T ss_pred HHHHHHcCCCChhheecc---chHHHHHHH--HHHHHHhCcChhheeeeEEEcCCCCeEEEEeeee---------eeCCe
Confidence 4456777 8999999665 899999999 99999999998877 9999999999999 56666
Q ss_pred ccccccc---------------------------------------chhhcc--CCceeEeE-eecCccccccceEeeec
Q psy17692 85 PKELYCP---------------------------------------EIEDRE--QDRRKPAI-HLLGHHGIEEEVFLSLP 122 (211)
Q Consensus 85 pv~~~~~---------------------------------------~~i~~d--~~~i~~vs-~l~G~yGi~~dV~~s~P 122 (211)
|+..+++ +++.+| +++++|++ +++|+||+.+|+|+|+|
T Consensus 204 ~l~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~~~~~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P 283 (327)
T 1y7t_A 204 PALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFP 283 (327)
T ss_dssp EGGGTSCHHHHHHTHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEE
T ss_pred eHHHhccchhHHHHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEE
Confidence 6554421 457788 58899999 68999999779999999
Q ss_pred eEEecceEEEEec-CCCCHHHHHHHHhhHHhHHhhhc
Q psy17692 123 CVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKEVFL 158 (211)
Q Consensus 123 ~vig~~GV~~Ive-~iLsdeE~~iL~~Sa~~l~~~~~ 158 (211)
|+| ++|+.++++ +.|+++|++.|..|++.+++..+
T Consensus 284 ~~i-~~G~~~i~~~~~l~~~e~~~l~~s~~~l~~~~~ 319 (327)
T 1y7t_A 284 VTA-KDGAYRVVEGLEINEFARKRMEITAQELLDEME 319 (327)
T ss_dssp EEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEE-cCCeEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999 999999998 99999999999999988877665
No 39
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.73 E-value=1.1e-17 Score=145.85 Aligned_cols=135 Identities=21% Similarity=0.306 Sum_probs=113.4
Q ss_pred hHHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc------cCCCceeeeccccccccccccccccCcc
Q psy17692 12 KNCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV------SSGKSCIVRKELYRPERTVSSRKNCIVP 85 (211)
Q Consensus 12 ~~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V------eHGds~vp~~S~~~i~~~il~~~v~g~p 85 (211)
.+.+++.++||++||||.| |.+|++|++ .++++++++++.++ +||++++|.|+.+ .+++.|
T Consensus 131 ~~~~~~~~~~~~~~vig~~--~~l~~~r~~--~~~a~~~~v~~~~v~~~~~G~~g~~~~~~w~k~---------~in~~~ 197 (319)
T 1lld_A 131 THVAQKLTGLPENQIFGSG--TNLDSARLR--FLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESA---------TIGGVP 197 (319)
T ss_dssp HHHHHHHHTCCTTSEEECT--THHHHHHHH--HHHHHHHTCCGGGEECCEEBSSSTTCEECTTSC---------EETTEE
T ss_pred HHHHHHhcCCCHHHEeecc--ccHhHHHHH--HHHHHHhCCCHHHeEEEEEeCCCCceeeeeecc---------eECCcc
Confidence 3556777899999999999 999999999 99999999999887 8999999999998 333333
Q ss_pred ccccc--------c-------------------------------------chhhccCCceeEeE-eecCccccccceEe
Q psy17692 86 KELYC--------P-------------------------------------EIEDREQDRRKPAI-HLLGHHGIEEEVFL 119 (211)
Q Consensus 86 v~~~~--------~-------------------------------------~~i~~d~~~i~~vs-~l~G~yGi~~dV~~ 119 (211)
+..+. . .++.++++..++++ +++|+|+. .++++
T Consensus 198 l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~~~G~~~~~~a~~~~sm~~di~~~~~~ei~~s~~~~G~~~~-~~~~~ 276 (319)
T 1lld_A 198 MSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFHGI-SDICM 276 (319)
T ss_dssp GGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHHHHHHTTCCEEEEEEEECSSBTTB-CSSEE
T ss_pred HHHHHhccccccCCHHHHHHHHHHHHHhhHhhhhCCCCchHHHHHHHHHHHHHHHcCCCcEEEEEEEecCcCCc-cceEE
Confidence 33221 0 23555667788887 78999998 79999
Q ss_pred eeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 120 SLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 120 s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
|+|+.++++|+..+++..|+++|++.|..|++.+++.++.+
T Consensus 277 gvp~~~~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 317 (319)
T 1lld_A 277 SVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKETAAQF 317 (319)
T ss_dssp EEEEEEETTEEECCSCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998888776543
No 40
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=99.58 E-value=2.2e-15 Score=138.05 Aligned_cols=144 Identities=10% Similarity=0.099 Sum_probs=107.6
Q ss_pred CCceechhhH------HHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-----------------cCC
Q psy17692 4 SGKTVSSRKN------CIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-----------------SSG 60 (211)
Q Consensus 4 ~~~~~~~~~~------~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-----------------eHG 60 (211)
++-.++.+|+ +++|.+ |++||||++ |.|| ||+ ++||+.+|+++++| +||
T Consensus 134 ~A~lin~TNPvdi~t~a~~k~~--p~~rviG~c--~~~~--r~~--~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG 205 (417)
T 1up7_A 134 NATIVNFTNPSGHITEFVRNYL--EYEKFIGLC--NVPI--NFI--REIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKG 205 (417)
T ss_dssp CCEEEECSSSHHHHHHHHHHTT--CCSSEEECC--SHHH--HHH--HHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETT
T ss_pred CEEEEEeCChHHHHHHHHHHhC--CCCCEEEeC--CCHH--HHH--HHHHHHhCCCHHHCeEEEEeecceeeEEEeecCC
Confidence 3445666664 456766 888999999 9996 999 99999999999999 599
Q ss_pred Cceeeecccc---cccc----ccc--------------------cc----cc--------------c----------Ccc
Q psy17692 61 KSCIVRKELY---RPER----TVS--------------------SR----KN--------------C----------IVP 85 (211)
Q Consensus 61 ds~vp~~S~~---~i~~----~il--------------------~~----~v--------------~----------g~p 85 (211)
++++|.||.. .+.. .+. .+ .+ . ..|
T Consensus 206 ~d~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~ 285 (417)
T 1up7_A 206 EDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIP 285 (417)
T ss_dssp EECHHHHHHHHTTC---CCTTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred cEehhhHHHHHHHhhCCCcCCchHHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999985 2211 000 00 00 0 000
Q ss_pred c--c-----cccc------chhhccCCceeEeE-eecCcc-ccccceEeeeceEEecceEEEEecCCCCHHHHHHHHhhH
Q psy17692 86 K--E-----LYCP------EIEDREQDRRKPAI-HLLGHH-GIEEEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSA 150 (211)
Q Consensus 86 v--~-----~~~~------~~i~~d~~~i~~vs-~l~G~y-Gi~~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa 150 (211)
. . .|.. ++|.+|++++++++ +.+|+| |+.+|+++++||+||++|+..++...|+++|+..|..++
T Consensus 286 ~~l~~kg~t~~~~~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~~L~~~e~~~l~~~~ 365 (417)
T 1up7_A 286 EELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVK 365 (417)
T ss_dssp GGGGGSTTTTHHHHHHHHHHHHHSSSCEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCCcHHHHHHHHHHHHHHcCCCeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecCCCCHHHHHHHHHHH
Confidence 0 0 0011 56888999999999 578999 787799999999999999999999999999999999987
Q ss_pred HhHHh
Q psy17692 151 QAIKE 155 (211)
Q Consensus 151 ~~l~~ 155 (211)
..++.
T Consensus 366 ~~e~l 370 (417)
T 1up7_A 366 MYERL 370 (417)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 41
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=99.52 E-value=9.3e-15 Score=135.05 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=104.2
Q ss_pred Cceechhh------HHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc-----------------cCCC
Q psy17692 5 GKTVSSRK------NCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV-----------------SSGK 61 (211)
Q Consensus 5 ~~~~~~~~------~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V-----------------eHGd 61 (211)
+-.++.+| ++++|.+ |++||||++ |.++ ||+ ++||+.+|+++++| +||+
T Consensus 146 a~ii~~tNPvdivT~a~~k~~--p~~rViG~c--~~~~--r~~--~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~ 217 (450)
T 1s6y_A 146 AWLINFTNPAGMVTEAVLRYT--KQEKVVGLC--NVPI--GMR--MGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGV 217 (450)
T ss_dssp CEEEECSSSHHHHHHHHHHHC--CCCCEEECC--SHHH--HHH--HHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTE
T ss_pred eEEEEeCCcHHHHHHHHHHhC--CCCCEEEeC--CcHH--HHH--HHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCc
Confidence 34555565 4567776 888999999 9985 999 99999999999999 4999
Q ss_pred ceeeeccccccc----c-------------ccc---------------c-c-----------------------------
Q psy17692 62 SCIVRKELYRPE----R-------------TVS---------------S-R----------------------------- 79 (211)
Q Consensus 62 s~vp~~S~~~i~----~-------------~il---------------~-~----------------------------- 79 (211)
+++|.|+...+. . ..+ . +
T Consensus 218 d~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~e 297 (450)
T 1s6y_A 218 EVTEKVIDLVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFE 297 (450)
T ss_dssp ECHHHHHHHHSCC------------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred CchHhHHHHHhhhccccccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 999999874221 0 000 0 0
Q ss_pred cc-----cCcccc-------cccc------chhhccCCceeEeE-eecCcc-ccccceEeeeceEEecceEEEEecCCCC
Q psy17692 80 KN-----CIVPKE-------LYCP------EIEDREQDRRKPAI-HLLGHH-GIEEEVFLSLPCVMADNGVTHIVNQPLT 139 (211)
Q Consensus 80 ~v-----~g~pv~-------~~~~------~~i~~d~~~i~~vs-~l~G~y-Gi~~dV~~s~P~vig~~GV~~Ive~iLs 139 (211)
-+ .+.|.. .|.. ++|.+|++++++++ ..+|+| |+.+|+++++||+||++|+..++...|+
T Consensus 298 i~~~~~~~~k~~~~~~~~~~~~~~~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~~L~ 377 (450)
T 1s6y_A 298 LYKDPNLAIKPPQLEKRGGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLP 377 (450)
T ss_dssp TTTCC-----------CCSCCHHHHHHHHHHHHHHTCCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCBCCC
T ss_pred HHhhhccccccchhhcccchHHHHHHHHHHHHHHcCCCeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecCCCC
Confidence 00 111100 0001 67899999999999 578988 7867999999999999999999999999
Q ss_pred HHHHHHHHhhH
Q psy17692 140 QEEIEKLKKSA 150 (211)
Q Consensus 140 deE~~iL~~Sa 150 (211)
++|+..+..+.
T Consensus 378 ~~e~~l~~~~~ 388 (450)
T 1s6y_A 378 VAVRGLVQQIK 388 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998887
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=99.44 E-value=1e-13 Score=128.86 Aligned_cols=138 Identities=9% Similarity=0.100 Sum_probs=102.3
Q ss_pred Cceechhh------HHHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCC-CCc-----c-------------C
Q psy17692 5 GKTVSSRK------NCIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPK-RTV-----S-------------S 59 (211)
Q Consensus 5 ~~~~~~~~------~~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~-~~V-----e-------------H 59 (211)
+-.++.+| ++++|.+ |++||||++ |.+| ||+ ++||+.+|+++ ++| + |
T Consensus 165 A~ii~~TNPvdi~T~~~~k~~--p~~rViG~c--~~~~--r~~--~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~h 236 (472)
T 1u8x_X 165 AWMLNYSNPAAIVAEATRRLR--PNSKILNIC--DMPV--GIE--DRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQE 236 (472)
T ss_dssp CEEEECCSCHHHHHHHHHHHS--TTCCEEECC--SHHH--HHH--HHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETT
T ss_pred eEEEEeCCcHHHHHHHHHHhC--CCCCEEEeC--CcHH--HHH--HHHHHHhCcCchhceeEEEeccchhhheeeeEeCC
Confidence 34455555 4556776 899999999 9986 999 99999999998 998 3 9
Q ss_pred CCceeeecccccc-----------------cccc--------------c--------------cc-----c--------c
Q psy17692 60 GKSCIVRKELYRP-----------------ERTV--------------S--------------SR-----K--------N 81 (211)
Q Consensus 60 Gds~vp~~S~~~i-----------------~~~i--------------l--------------~~-----~--------v 81 (211)
|++++|.|+...+ .... . .. + .
T Consensus 237 G~d~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~ 316 (472)
T 1u8x_X 237 GNDLMPKLKEHVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGR 316 (472)
T ss_dssp CCBCHHHHHHHHHHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHT
T ss_pred CCEehHhHHHHHHhcCCCccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999987421 0000 0 00 0 0
Q ss_pred --cCc-----c-------cccc---cc--------chhhccCCceeEeE-eecCcc-ccccceEeeeceEEecceEEEEe
Q psy17692 82 --CIV-----P-------KELY---CP--------EIEDREQDRRKPAI-HLLGHH-GIEEEVFLSLPCVMADNGVTHIV 134 (211)
Q Consensus 82 --~g~-----p-------v~~~---~~--------~~i~~d~~~i~~vs-~l~G~y-Gi~~dV~~s~P~vig~~GV~~Iv 134 (211)
... + -..+ .. ++|.+|++++++++ ..+|+| |+.+|+++++||+||++|+..++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~AI~~d~~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~ 396 (472)
T 1u8x_X 317 EAFIFSQCDMITREQSSENSEIKIDDHASYIVDLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPIT 396 (472)
T ss_dssp TTTTTTTHHHHHHHTSCCSCSSCCCTTTHHHHHHHHHHHHTCCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECC
T ss_pred HHHHHHHHHhhhhcCCcccccccccHHHHHHHHHHHHHhcCCCeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEee
Confidence 000 0 0001 11 67899999999999 578988 78779999999999999999999
Q ss_pred cCCCCHHHHHHHHhhH
Q psy17692 135 NQPLTQEEIEKLKKSA 150 (211)
Q Consensus 135 e~iLsdeE~~iL~~Sa 150 (211)
...|+++|+..+..-.
T Consensus 397 ~~~Lp~~~~~l~~~~~ 412 (472)
T 1u8x_X 397 VGTIPQFQKGLMEQQV 412 (472)
T ss_dssp CBCCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 9999999877776543
No 43
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.82 E-value=5.6e-11 Score=104.26 Aligned_cols=157 Identities=16% Similarity=0.147 Sum_probs=101.4
Q ss_pred HHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCccCCCceeeeccccccccccccc---------cccC-
Q psy17692 14 CIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTVSSGKSCIVRKELYRPERTVSSR---------KNCI- 83 (211)
Q Consensus 14 ~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~VeHGds~vp~~S~~~i~~~il~~---------~v~g- 83 (211)
.+.+..-+.|+=+|-.=. -=+|+ +. +...+..|.++.+| -|-.++.+.++++ +++.+ .+.|
T Consensus 101 i~~~i~~~~p~aivlvvs-NPvd~--~t--~i~~k~sg~p~~rv-ig~gT~LDs~R~~---~~l~~~~~~~~~~~~V~G~ 171 (294)
T 2x0j_A 101 IAKKIVENAPESKILVVT-NPMDV--MT--YIMWKESGKPRNEV-FGMGNQLDSQRLK---ERLYNAGARNIRRAWIIGE 171 (294)
T ss_dssp HHHHHHTTSTTCEEEECS-SSHHH--HH--HHHHHHSSCCTTSE-EECCHHHHHHHHH---HHHHHTTCEEECCCCEEBC
T ss_pred HHHHHHhcCCceEEEEec-Ccchh--hH--HhhHHHcCCChhhE-EEeeeEEeHHHHH---HHHhhcccCCcceeEEEec
Confidence 344444455555555541 23565 55 66777779988888 4444445544441 11111 1111
Q ss_pred -----cccccccc-------chhhc-cCCceeEeEeecC--ccccccceEeeeceEEecceEEEEecCCCCHHHHHHHHh
Q psy17692 84 -----VPKELYCP-------EIEDR-EQDRRKPAIHLLG--HHGIEEEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKK 148 (211)
Q Consensus 84 -----~pv~~~~~-------~~i~~-d~~~i~~vs~l~G--~yGi~~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~ 148 (211)
+|+-..+. +.+.. -+.....+...+| .|+++ .++.++++++|.|+ ++.+++
T Consensus 172 HGdt~vp~~S~~~v~g~~~~~~i~~~~~~~g~eIi~~kGst~~a~a-------------~a~~~~~~ail~d~-~~v~~~ 237 (294)
T 2x0j_A 172 HGDSMFVAKSLADFDGEVDWEAVENDVRFVAAEVIKRKGATIFGPA-------------VAIYRMVKAVVEDT-GEIIPT 237 (294)
T ss_dssp SSTTCEECGGGCCEESCCCHHHHHHHHHTHHHHHHHHHSSCCHHHH-------------HHHHHHHHHHHTTC-CCEEEE
T ss_pred CCCcEEEeeeccCCCCchhHHHHHHHHhhhheEEEecCcccchhHH-------------HHHHHHHHHHHcCC-CcEEEE
Confidence 33322221 11111 1123344444566 68887 78889999999997 899999
Q ss_pred hH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 149 SA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 149 Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
|+ ++.|+. +-|+|++||++|++ +++++||++|+++|++||+.||+
T Consensus 238 s~~l~g~yG~~~v~~s~P~~lg~~Gve-i~~l~L~~~E~~~l~~s~~~lk~ 287 (294)
T 2x0j_A 238 SMILQGEYGIENVAVGVPAKLGKNGAE-VADIKLSDEEIEKLRNSAKILRE 287 (294)
T ss_dssp EEEEESGGGCEEEEEEEEEEEETTEEE-ECCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCccEEEEEEEEEeCCEEE-EeCCCCCHHHHHHHHHHHHHHHH
Confidence 98 677765 45999999999995 88999999999999999999975
No 44
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.74 E-value=1.7e-10 Score=102.49 Aligned_cols=66 Identities=24% Similarity=0.342 Sum_probs=59.4
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHh---hhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKE---VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~---~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.++ ++.+++|+ ++.|+ ++-|+|++||++|++++++++||++|+++|++||+.||+
T Consensus 238 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~ 308 (326)
T 3pqe_A 238 MSLARITKAILHNE-NSILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITELNLNEKEKEQFLHSAGVLKN 308 (326)
T ss_dssp HHHHHHHHHHHTTC-CEEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CcEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 77888999999986 79999987 66776 455999999999999999999999999999999999986
No 45
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.72 E-value=1.7e-10 Score=102.56 Aligned_cols=66 Identities=29% Similarity=0.449 Sum_probs=59.1
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHh---hhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKE---VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~---~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.++ ++.+++|+ ++.|+ ++-|+|++||++|++++++++||++|+++|++||+.|++
T Consensus 241 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~sa~~L~~ 311 (326)
T 3vku_A 241 TALARISKAILNDE-NAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKK 311 (326)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCC-CceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 77788999999986 89999987 66776 455999999999999999999999999999999999975
No 46
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.70 E-value=2.5e-10 Score=100.83 Aligned_cols=66 Identities=20% Similarity=0.397 Sum_probs=59.6
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHh---hhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKE---VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~---~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.++ ++.+++|+ ++.|+ ++-|+|+++|++|++++++++||++|+++|++|++.||+
T Consensus 239 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~ 309 (315)
T 3tl2_A 239 ASLVEMTEAILKDQ-RRVLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIELELLADEKEALDRSVESVRN 309 (315)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 77888999999986 78999997 67777 455999999999999999999999999999999999986
No 47
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.69 E-value=2.7e-10 Score=101.02 Aligned_cols=66 Identities=21% Similarity=0.350 Sum_probs=59.7
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.|+ ++++++|+ ++.|+. +-|+|++||++|++++++++||++|+++|++||+.||+
T Consensus 241 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~ 311 (324)
T 3gvi_A 241 ASAIQMAESYLKDK-KRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSVASVAG 311 (324)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 77888999999997 79999997 667774 55999999999999999999999999999999999885
No 48
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.67 E-value=4.2e-10 Score=100.15 Aligned_cols=66 Identities=27% Similarity=0.456 Sum_probs=59.2
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh----hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV----FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~----~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.|+ ++.+++|+ ++.|++ +-|+|++||++|++++++++||++|+++|++|++.||+
T Consensus 253 ~a~a~~~~ail~d~-~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~ 324 (331)
T 4aj2_A 253 LSVADLAESIMKNL-RRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWG 324 (331)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 66778999999997 88999987 777764 44999999999999999999999999999999999986
No 49
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.62 E-value=5.4e-10 Score=97.85 Aligned_cols=65 Identities=26% Similarity=0.382 Sum_probs=58.1
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHh---hhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKE---VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~---~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.++ ++.+++|+ ++.|+ ++-|+|+++|++||+ +++++||++|+++|++|++.||+
T Consensus 218 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l~L~~~E~~~l~~s~~~l~~ 287 (294)
T 1oju_A 218 VAIYRMVKAVVEDT-GEIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADIKLSDEEIEKLRNSAKILRE 287 (294)
T ss_dssp HHHHHHHHHHHTTC-CCEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEecccccCCCCceEEEEEEEEeCCEEE-EecCCCCHHHHHHHHHHHHHHHH
Confidence 77888999999986 89999996 66675 455999999999999 99999999999999999999986
No 50
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.60 E-value=5.3e-10 Score=98.78 Aligned_cols=66 Identities=20% Similarity=0.323 Sum_probs=58.5
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.++ ++.+++|+ ++.|+. +-|+|+++|++|++++++++||++|+++|++||+.||+
T Consensus 229 ~a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~ 299 (314)
T 3nep_X 229 AAAAEMTEAILKDN-KRILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEVDLDADEKAQLKTSAGHVHS 299 (314)
T ss_dssp HHHHHHHHHHHHTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEEEeccccCCCceEEEEEEEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 67778899999886 78999987 667764 45999999999999999999999999999999999875
No 51
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.58 E-value=9.2e-10 Score=96.24 Aligned_cols=57 Identities=30% Similarity=0.316 Sum_probs=48.4
Q ss_pred CceeEeE-eecCccccccceEeeeceEEecceEEEEecCCCCHHHHHHHHhhHHhHHhhhccc
Q psy17692 99 DRRKPAI-HLLGHHGIEEEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSL 160 (211)
Q Consensus 99 ~~i~~vs-~l~G~yGi~~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~sv 160 (211)
++++|++ +++| || +|+|+||+||++|+.++++..|+++|++.|..|++.+++..+.+
T Consensus 245 ~~~~~~~~~~~g-yg----~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 245 RAVLTVSAPTPE-YG----VSLSLPRVVGRQGVLSTLHPKLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp CEEEEEEEEETT-TT----EEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHC-----
T ss_pred CcEEEEEEEECC-cC----cEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4688988 6899 86 99999999999999999999999999999999999998876643
No 52
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.53 E-value=2.5e-07 Score=85.48 Aligned_cols=57 Identities=9% Similarity=-0.015 Sum_probs=48.8
Q ss_pred chhhccCCceeEeE-eecCcc-ccccceEeeeceEEecceEEEEecCCCCHHHHHHHHh
Q psy17692 92 EIEDREQDRRKPAI-HLLGHH-GIEEEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKK 148 (211)
Q Consensus 92 ~~i~~d~~~i~~vs-~l~G~y-Gi~~dV~~s~P~vig~~GV~~Ive~iLsdeE~~iL~~ 148 (211)
++|.+|++++++++ ..+|.| |+.+|+++++||+||++|+..+....|.+.++..+..
T Consensus 333 ~aI~~d~~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~g~Lp~~~~~l~~~ 391 (450)
T 3fef_A 333 AALLGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEMLAAR 391 (450)
T ss_dssp HHHTTSCCEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCCCCCCHHHHHHHHH
T ss_pred HHHHcCCCeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceecccCCCCHHHHHHHHH
Confidence 46778888999999 578887 8867999999999999999999988999997665544
No 53
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.53 E-value=1.4e-09 Score=96.21 Aligned_cols=65 Identities=23% Similarity=0.272 Sum_probs=58.6
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--H-hHHhhh----cccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--Q-AIKEVF----LSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~-~l~~~~----~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.|+ ++.+++|+ + +.|++. -|+|++||++|++++ +++||++|+++|++||+.||+
T Consensus 239 ~a~~~~~~ail~~~-~~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l~L~~~E~~~l~~s~~~l~~ 310 (321)
T 3p7m_A 239 AAGIQMAESFLKDK-KMILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EVEISDKEREQLQVSINAIKD 310 (321)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CCCCCHHHHHHHHHHHHHHHH
Confidence 77888999999997 79999997 6 788664 499999999999999 999999999999999999985
No 54
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.44 E-value=3.8e-09 Score=92.32 Aligned_cols=66 Identities=26% Similarity=0.325 Sum_probs=57.3
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|++ +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 227 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 297 (303)
T 1o6z_A 227 RGVAHMVEAILHDT-GEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSD 297 (303)
T ss_dssp HHHHHHHHHHHTTC-CCEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCEEEEEEecCCccCCcceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 55677888899987 78888887 566654 44999999999999999999999999999999999986
No 55
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.38 E-value=5.6e-09 Score=91.49 Aligned_cols=66 Identities=23% Similarity=0.453 Sum_probs=57.5
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 231 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 301 (309)
T 1ur5_A 231 AATAQMVEAVLKDK-KRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRA 301 (309)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEEecCccCCcceEEEEEEEEeCCceEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 56777889999987 78898887 566654 34999999999999999999999999999999999986
No 56
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.37 E-value=6.4e-09 Score=91.81 Aligned_cols=67 Identities=21% Similarity=0.259 Sum_probs=58.2
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHhc
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKIR 195 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~~ 195 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.|++-
T Consensus 241 ~a~~~~~~ai~~~~-~~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~L~~~ 312 (322)
T 1t2d_A 241 AAIIEMAESYLKDL-KKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRM 312 (322)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 66677889999987 78899887 666654 449999999999999999999999999999999999863
No 57
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.37 E-value=4.8e-09 Score=92.14 Aligned_cols=66 Identities=33% Similarity=0.433 Sum_probs=57.2
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 233 ~a~~~~~~ai~~~~-~~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~ 303 (310)
T 2xxj_A 233 AGLARLVRAILTDE-KGVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKE 303 (310)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 55677889999986 78899887 555554 44999999999999999999999999999999999986
No 58
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.36 E-value=6.7e-09 Score=91.60 Aligned_cols=67 Identities=22% Similarity=0.440 Sum_probs=57.9
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHhc
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKIR 195 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~~ 195 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+.
T Consensus 236 ~a~~~~~~ai~~~~-~~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~ 307 (318)
T 1ez4_A 236 TALMRISKAILRDE-NAVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKV 307 (318)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CcEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 56778889999986 78899987 565643 459999999999999999999999999999999999863
No 59
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.36 E-value=3e-09 Score=94.67 Aligned_cols=64 Identities=31% Similarity=0.497 Sum_probs=56.5
Q ss_pred eEEEEecCCCCHHHHHHHHhhH--HhHHhh----hcccceeecCCceeE--EecCCCCHHHHHHHHHHHHHHHh
Q psy17692 129 GVTHIVNQPLTQEEIEKLKKSA--QAIKEV----FLSLPCVMADNGVTH--IVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 129 GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~----~~svP~vlg~~Gv~~--ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
++.++++++|.|+ ++.+++|+ ++.|++ +-|+|++|| +|+++ +++++||++|+++|++||+.||+
T Consensus 252 a~~~~~~ail~~~-~~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~~L~~~E~~~l~~s~~~l~~ 323 (330)
T 3ldh_A 252 SVADLAQTIMKDL-CRVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKMKLKPDEEQQLQKSATTLWD 323 (330)
T ss_dssp HHHHHHHHHHHTC-CEEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecCCCCHHHHHHHHHHHHHHHH
Confidence 6678889999886 78999997 667754 459999999 99999 99999999999999999999875
No 60
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.36 E-value=6.6e-09 Score=90.90 Aligned_cols=66 Identities=23% Similarity=0.374 Sum_probs=57.5
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 230 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 300 (310)
T 1guz_A 230 SSVVEMVESIVLDR-KRVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEINLDQADLDLLQKSAKIVDE 300 (310)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 56777889999987 78898887 566654 34999999999999999999999999999999999986
No 61
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.36 E-value=6.7e-09 Score=91.17 Aligned_cols=66 Identities=24% Similarity=0.345 Sum_probs=57.5
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 227 ~a~~~~~~ai~~~~-~~v~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~ 297 (308)
T 2d4a_B 227 AGLVLTVEAIKRDS-KRIYPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIELPLTEDEKRKFDEAVQAVKK 297 (308)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CcEEEEEEEEcCccCCCceEEEEEEEEcCCceEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 55778889999987 78898887 566654 34999999999999999999999999999999999986
No 62
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.36 E-value=5.6e-09 Score=91.78 Aligned_cols=66 Identities=23% Similarity=0.430 Sum_probs=56.6
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 239 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 309 (316)
T 1ldn_A 239 MGLARVTRAILHNE-NAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKS 309 (316)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CcEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 45677888899986 78888887 555544 44999999999999999999999999999999999986
No 63
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.35 E-value=7.4e-09 Score=91.08 Aligned_cols=66 Identities=30% Similarity=0.468 Sum_probs=57.6
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 238 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 308 (317)
T 3d0o_A 238 MGLARITEAIFRNE-DAVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEIPLNDEEQSKFAHSAKTLKD 308 (317)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 56778889999986 78899987 565643 45999999999999999999999999999999999986
No 64
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.35 E-value=6e-09 Score=91.78 Aligned_cols=66 Identities=26% Similarity=0.357 Sum_probs=56.6
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++||+.||+
T Consensus 240 ~a~~~~~~ai~~~~-~~~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~ 310 (318)
T 1y6j_A 240 VSINTIVETLLKNQ-NTIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKK 310 (318)
T ss_dssp HHHHHHHHHHHHTC-CCEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 55667888888885 78888887 555554 44999999999999999999999999999999999986
No 65
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.34 E-value=7e-09 Score=91.11 Aligned_cols=66 Identities=30% Similarity=0.415 Sum_probs=57.2
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++++ ++.+++|+ ++.|++ +-++||+||++|++++++++|+++|+++|++||+.||+
T Consensus 232 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~ 302 (319)
T 1a5z_A 232 LAVADIVESIFFDE-KRVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKN 302 (319)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCEEEEEEEecCccCccceEEEEEEEEeCCceEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 56678889999986 78898887 555554 44999999999999999999999999999999999986
No 66
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.34 E-value=7.3e-09 Score=92.55 Aligned_cols=65 Identities=12% Similarity=0.215 Sum_probs=54.1
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--Hh--HHhhhcccceeecCCceeEEecCC--CCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QA--IKEVFLSLPCVMADNGVTHIVNQP--LTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~--l~~~~~svP~vlg~~Gv~~ii~l~--L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++|.|+ +..+++|+ ++ ..+++-|+|++||++||+++ +++ ||++|+++|++||+.||+
T Consensus 242 ~a~~~~~~ail~d~-~~v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~ 312 (343)
T 3fi9_A 242 YVSIEMIRAAMGGE-AFRWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLAK 312 (343)
T ss_dssp HHHHHHHHHHTTSS-CCCSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CceEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHH
Confidence 56677899999997 68899887 32 23456699999999999987 555 899999999999999986
No 67
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=98.34 E-value=7.4e-09 Score=91.35 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=56.0
Q ss_pred ceEEEEecCC---CCHHHHHHHHhhH-H--hHHhhhcccceeecCCceeEEecC-CCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQP---LTQEEIEKLKKSA-Q--AIKEVFLSLPCVMADNGVTHIVNQ-PLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~i---LsdeE~~iL~~Sa-~--~l~~~~~svP~vlg~~Gv~~ii~l-~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++.+ |+++ +..+++|. + +.++++-|+|+++|++|+++++++ +||++|+++|++|++.||+
T Consensus 229 ~a~~~~~~ai~~~l~~~-~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~ 301 (312)
T 3hhp_A 229 QAAARFGLSLVRALQGE-QGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKK 301 (312)
T ss_dssp HHHHHHHHHHHHHHTTC-SSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEEEecCCCCcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHHHH
Confidence 7777788777 6775 67888774 2 356677799999999999999999 9999999999999999986
No 68
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.32 E-value=9.6e-09 Score=90.95 Aligned_cols=66 Identities=20% Similarity=0.364 Sum_probs=57.8
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 249 ~a~~~ii~ai~~~~-~~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~ 319 (331)
T 1pzg_A 249 ASAVAMATSFLNDE-KRVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVDDVMA 319 (331)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CcEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 66778889999987 78898887 666654 34999999999999999999999999999999999986
No 69
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.32 E-value=9.6e-09 Score=90.95 Aligned_cols=67 Identities=28% Similarity=0.426 Sum_probs=57.7
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHhc
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKIR 195 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~~ 195 (211)
.++.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+.
T Consensus 241 ~aa~~~~~ai~~~~-~~~~~vsv~~~G~yg~~~~~~svP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~ 312 (326)
T 2zqz_A 241 TALARISKAILNDE-NAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKV 312 (326)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CcEEEEEEeccCccCCCceEEEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 56777889999986 78898887 565543 459999999999999999999999999999999999863
No 70
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.31 E-value=8.9e-09 Score=90.28 Aligned_cols=66 Identities=26% Similarity=0.391 Sum_probs=56.7
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHH----hhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIK----EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~----~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++|+ ++.| +.+-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 234 ~a~~~~~~ai~~~~-~~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 305 (313)
T 1hye_A 234 AAILNVVRCIVNNE-KRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKK 305 (313)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 55677888899987 78888887 5555 3445999999999999999999999999999999999986
No 71
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.29 E-value=1.3e-08 Score=90.04 Aligned_cols=67 Identities=22% Similarity=0.321 Sum_probs=57.8
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHhc
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKIR 195 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~~ 195 (211)
..+.++++++++++ ++.+++|+ ++.|+. +-++||+||++|++++++++|+++|+++|++|++.||+.
T Consensus 248 ~a~~~i~~ai~~~~-~~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~ 319 (328)
T 2hjr_A 248 ASAVAMAQAYLKDS-KSVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIVNLSDDEKSLFSKSVESIQNL 319 (328)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 66778889999987 68888887 666654 349999999999999999999999999999999999863
No 72
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.28 E-value=8.5e-09 Score=90.46 Aligned_cols=66 Identities=29% Similarity=0.483 Sum_probs=56.4
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh----hcccceeecCCceeEEecC-CCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV----FLSLPCVMADNGVTHIVNQ-PLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~----~~svP~vlg~~Gv~~ii~l-~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++|+ ++.|++ +-++||+||++|+++++++ +|+++|+++|++||+.||+
T Consensus 224 ~a~~~i~~ai~~~~-~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~ 296 (303)
T 2i6t_A 224 LSVADMVDSIVNNK-KKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHS 296 (303)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 66778889999987 78888887 666544 4499999999999999999 8999999999999999986
No 73
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.25 E-value=1.6e-08 Score=88.01 Aligned_cols=65 Identities=25% Similarity=0.337 Sum_probs=54.9
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ +..+++|+ ++ .+.+-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 234 ~a~~~~~~ai~~~~-~~~~~~~~~~~g-~~~~~~vP~~i~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 300 (309)
T 1hyh_A 234 TSAIRIAKAVMADA-HAELVVSNRRDD-MGMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQ 300 (309)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEECTT-TCSEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEEECC-CCeEEEEEEEEeCCceEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 44566777778876 67777776 55 56667999999999999999999999999999999999986
No 74
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.23 E-value=1.7e-08 Score=88.29 Aligned_cols=66 Identities=21% Similarity=0.309 Sum_probs=54.5
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHHhh---hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIKEV---FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~---~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
..+.++++++++++ ++.+++++ ++.++. +-++||+||++|++++++++|+++|+++|++|++.||+
T Consensus 238 ~a~~~~~~ai~~~~-~~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 308 (317)
T 2ewd_A 238 AAAVKMAEAYLKDK-KAVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILELDLTPLEQKLLGESINEVNT 308 (317)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 45566777778876 57777776 555544 44999999999999999999999999999999999986
No 75
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=98.15 E-value=1e-07 Score=86.20 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=53.2
Q ss_pred EEEEecCCC-----CHHHHHHHHhhH--Hh-HHhh----hcccceeecCCceeEEec-CCCCHHHHHHHHHHHHHHHh
Q psy17692 130 VTHIVNQPL-----TQEEIEKLKKSA--QA-IKEV----FLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 130 V~~Ive~iL-----sdeE~~iL~~Sa--~~-l~~~----~~svP~vlg~~Gv~~ii~-l~L~~~E~~~l~~Sa~~ik~ 194 (211)
+.+++++++ +|+ ++.+++|+ ++ .|++ +-|+|++||++|++++++ ++||++|+++|++||+.|++
T Consensus 271 a~~i~~~i~~~l~g~d~-~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l~~Sa~~L~~ 347 (375)
T 7mdh_A 271 AVSIADAIKSLVTPTPE-GDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLA 347 (375)
T ss_dssp HHHHHHHHHHHHSCCCT-TCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCC-CeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 445666665 465 78999997 66 6765 459999999999999995 99999999999999998875
No 76
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=98.07 E-value=9.3e-08 Score=83.73 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=55.1
Q ss_pred eEEEEecCCCCHH-HHHHHHhhH--HhHHhh----hcccceeecCCceeEEec-CCCCHHHHHHHHHHHHHHHh
Q psy17692 129 GVTHIVNQPLTQE-EIEKLKKSA--QAIKEV----FLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 129 GV~~Ive~iLsde-E~~iL~~Sa--~~l~~~----~~svP~vlg~~Gv~~ii~-l~L~~~E~~~l~~Sa~~ik~ 194 (211)
++.+++++++++. +++.+++|+ ++.|++ +-|+|++| ++|++++++ ++|+++|+++|++|++.||+
T Consensus 244 a~~~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~~l~~~e~~~l~~s~~~l~~ 316 (327)
T 1y7t_A 244 AAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGLEINEFARKRMEITAQELLD 316 (327)
T ss_dssp HHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 4567788888884 478899888 556665 45999999 999999998 99999999999999999985
No 77
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.01 E-value=7.1e-07 Score=79.23 Aligned_cols=65 Identities=18% Similarity=0.204 Sum_probs=51.7
Q ss_pred eEEEEecCCCCHH-HHHHHHhhH--Hh-HHhh----hcccceeecCCceeEEec-CCCCHHHHHHHHHHHHHHHh
Q psy17692 129 GVTHIVNQPLTQE-EIEKLKKSA--QA-IKEV----FLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 129 GV~~Ive~iLsde-E~~iL~~Sa--~~-l~~~----~~svP~vlg~~Gv~~ii~-l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.+..+++.++.++ |++++++|+ ++ .|++ +-|+|++| ++|++++++ ++||++|+++|++||+.||+
T Consensus 248 ~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~l~~sa~~L~~ 321 (333)
T 5mdh_A 248 AICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGLPINDFSREKMDLTAKELAE 321 (333)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHHHHHHHHHHHH
Confidence 3444555555554 356888887 66 7765 45999999 999999998 99999999999999999986
No 78
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.88 E-value=4.8e-07 Score=79.70 Aligned_cols=65 Identities=9% Similarity=0.111 Sum_probs=53.0
Q ss_pred eEEEEecCCCCHHHHHHHHhhH--HhHHhh----hcccceeecCCceeEEec-CCCCHHHHHHHHHHHHHHHh
Q psy17692 129 GVTHIVNQPLTQEEIEKLKKSA--QAIKEV----FLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 129 GV~~Ive~iLsdeE~~iL~~Sa--~~l~~~----~~svP~vlg~~Gv~~ii~-l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.+.+++++++.+.+++.+++|+ ++.|++ +-++||+| ++|++++++ ++|+++|+++|++|++.||+
T Consensus 248 a~~~~~~ai~~~~~~~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~ 319 (329)
T 1b8p_A 248 AAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGLSIDAFSQERINVTLNELLE 319 (329)
T ss_dssp HHHHHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 3455677777662367888887 555665 45999999 999999998 99999999999999999986
No 79
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.74 E-value=1.8e-05 Score=69.38 Aligned_cols=67 Identities=10% Similarity=0.132 Sum_probs=50.0
Q ss_pred ceEEEEecCCCCHHH--HHHHHhhH-HhHH--hhhcccceeecCCceeEEecC-CCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEE--IEKLKKSA-QAIK--EVFLSLPCVMADNGVTHIVNQ-PLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE--~~iL~~Sa-~~l~--~~~~svP~vlg~~Gv~~ii~l-~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++++|.. +..++++. ++.| +.+-++||+||++|+++++++ +|+++|+++|++|++.||+
T Consensus 229 ~a~~~~~~ai~~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~ 301 (314)
T 1mld_A 229 YAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 301 (314)
T ss_dssp HHHHHHHHHHHHHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 555666677776641 13555532 3322 334599999999999999999 9999999999999999985
No 80
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.64 E-value=3e-05 Score=68.19 Aligned_cols=66 Identities=14% Similarity=0.199 Sum_probs=49.8
Q ss_pred ceEEEEecCC---CCHHHHHHHHhhH-HhH--HhhhcccceeecCCceeEEec-CCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQP---LTQEEIEKLKKSA-QAI--KEVFLSLPCVMADNGVTHIVN-QPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~i---LsdeE~~iL~~Sa-~~l--~~~~~svP~vlg~~Gv~~ii~-l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++++ ++++ +..+++|. ++. .+.+-++||+||++|++++++ ++|+++|+++|++|++.||+
T Consensus 237 ~a~~~~~~ai~~~~~~~-~~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~~~l~~ 309 (326)
T 1smk_A 237 YAAVKFADACLRGLRGD-AGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAG 309 (326)
T ss_dssp HHHHHHHHHHHHHHHTC-SCEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-CeEEEEEeeccccCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHHHHHHH
Confidence 5555566666 5555 45555553 221 124459999999999999999 99999999999999999986
No 81
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.41 E-value=6.8e-06 Score=75.07 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=55.4
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHH-----hhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHH
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIK-----EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIK 193 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~-----~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik 193 (211)
..+.+|++++++|+ ++++++|+ ++.+ +.+-++||+||++|++.++..+|+++|+++|+.+++..+
T Consensus 298 ~~a~~ii~AI~~d~-~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~~L~~~e~~~l~~~~~~e~ 369 (417)
T 1up7_A 298 TAAAHLIRDLETDE-GKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYER 369 (417)
T ss_dssp HHHHHHHHHHHSSS-CEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecCCCCHHHHHHHHHHHHHHH
Confidence 44667889999997 89999998 5544 334599999999999999999999999999999997765
No 82
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.40 E-value=2.7e-06 Score=78.44 Aligned_cols=63 Identities=10% Similarity=0.145 Sum_probs=54.2
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHH-----hhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHH
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIK-----EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQA 191 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~-----~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ 191 (211)
..+.+|++++++|+ ++++++|+ ++.+ +.+-++||+||++|++.++..+|+++|++.|+.+++.
T Consensus 321 ~~a~~ii~AI~~d~-~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~~L~~~e~~l~~~~~~~ 390 (450)
T 1s6y_A 321 DAACSLISSIYNDK-RDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSF 390 (450)
T ss_dssp HHHHHHHHHHHHTC-CCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecCCCCHHHHHHHHHHHHH
Confidence 55778999999997 89999998 5544 3345999999999999999999999999999998854
No 83
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.29 E-value=0.00012 Score=63.00 Aligned_cols=36 Identities=33% Similarity=0.675 Sum_probs=34.8
Q ss_pred ccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 159 SLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 159 svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
++|+.+|++|++++++++|+++|+++|++|++.||+
T Consensus 277 gvp~~~~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~ 312 (319)
T 1lld_A 277 SVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKE 312 (319)
T ss_dssp EEEEEEETTEEECCSCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999986
No 84
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.72 E-value=3.2e-05 Score=71.70 Aligned_cols=61 Identities=11% Similarity=0.209 Sum_probs=51.7
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHH-----hhhcccceeecCCceeEEecCCCCHHHHHHHHHHH
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIK-----EVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSA 189 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~-----~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa 189 (211)
..+.+|++++++|+ ++++++|+ ++.+ +++-++||+||++||+.++..+|+++|++.++.-.
T Consensus 345 ~~a~~ii~AI~~d~-~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~~Lp~~~~~l~~~~~ 412 (472)
T 1u8x_X 345 SYIVDLARAIAYNT-GERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVGTIPQFQKGLMEQQV 412 (472)
T ss_dssp HHHHHHHHHHHHTC-CEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeecCCCCHHHHHHHHHHH
Confidence 56677899999997 89999998 5543 34459999999999999999999999999988754
No 85
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.35 E-value=0.00078 Score=60.00 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=39.1
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH-----HhHHhh----hcccceeecCCceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA-----QAIKEV----FLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa-----~~l~~~----~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.++.++++.++.++ +...++|+ ++.|++ +-|+|+++|++|++.+..++|+++|+++|++|++.||+
T Consensus 264 ~a~~~~~~~~l~~~-~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~~G~~~iv~~l~l~~~e~~~l~~s~~~L~~ 338 (345)
T 4h7p_A 264 KAAVDHVHDWIHGT-PEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGKLNGDLGKQRLASTIAELQE 338 (345)
T ss_dssp HHHHHHHHHHHHCC-CTTCCEEEEEECTTCTTCCCSSCEEEEEEEEETTEEEECCSCC-----CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCceEEEEEEEeCCCCcCCCCCEEEEEEEEEeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 33444455544443 34444443 355554 44999999854444444689999999999999999986
No 86
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.11 E-value=0.0067 Score=56.25 Aligned_cols=43 Identities=12% Similarity=0.005 Sum_probs=35.0
Q ss_pred CceechhhH------HHHHHhCCCCCcEEecCCCCcCcccCccchhhhhhhhCCCCCCc
Q psy17692 5 GKTVSSRKN------CIVRKELYRPERTVSSGKNCIVPKELFRPERTVSSRKNRPKRTV 57 (211)
Q Consensus 5 ~~~~~~~~~------~~~k~sg~p~~rviG~g~~t~LDs~R~~~~~~la~~~~v~~~~V 57 (211)
+-.++.+|+ +++| ||++||||++ |.+|+ |+ ++| +.+|+++++|
T Consensus 146 A~ii~~TNPvdi~t~~~~k---~p~~rviG~c--~~~~~--~~--~~l-~~lgv~~~~v 194 (480)
T 1obb_A 146 AWYLQAANPIFEGTTLVTR---TVPIKAVGFC--HGHYG--VM--EIV-EKLGLEEEKV 194 (480)
T ss_dssp CEEEECSSCHHHHHHHHHH---HSCSEEEEEC--SGGGH--HH--HHH-HHTTCCGGGE
T ss_pred eEEEEeCCcHHHHHHHHHH---CCCCcEEecC--CCHHH--HH--HHH-HHhCCCHHHc
Confidence 344555554 4455 8999999999 99996 78 999 9999999999
No 87
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.74 E-value=0.0024 Score=58.79 Aligned_cols=61 Identities=11% Similarity=0.034 Sum_probs=49.3
Q ss_pred ceEEEEecCCCCHHHHHHHHhhH--HhHH-h----hhcccceeecCCceeEEecCCCCHHHHHHHHHHH
Q psy17692 128 NGVTHIVNQPLTQEEIEKLKKSA--QAIK-E----VFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSA 189 (211)
Q Consensus 128 ~GV~~Ive~iLsdeE~~iL~~Sa--~~l~-~----~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa 189 (211)
..+.++++++++|+ +.++++|+ ++.+ + .+-++||+||++|++.+...+|++.++..++.-.
T Consensus 326 e~~~~ii~aI~~d~-~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~g~Lp~~~~~l~~~~~ 393 (450)
T 3fef_A 326 EEGVNIIAALLGLG-ELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEMLAARHI 393 (450)
T ss_dssp CCHHHHHHHHTTSC-CEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceecccCCCCHHHHHHHHHHH
Confidence 55677889999997 78999988 4443 3 3459999999999999999999999988776543
No 88
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=77.43 E-value=0.55 Score=23.87 Aligned_cols=12 Identities=25% Similarity=0.838 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 379999999863
No 89
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=79.02 E-value=0.47 Score=24.12 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=9.5
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|+.|||.|..
T Consensus 4 ~C~~C~k~f~~ 14 (26)
T 2lvu_A 4 VCERCGKRFVQ 14 (26)
Confidence 79999999864
No 90
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=76.20 E-value=0.65 Score=24.07 Aligned_cols=12 Identities=33% Similarity=1.096 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 379999999864
No 91
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.55 E-value=0.65 Score=23.98 Aligned_cols=12 Identities=17% Similarity=0.598 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvg_A 4 YRCPLCRAGCPS 15 (27)
T ss_dssp EEETTTTEEESC
T ss_pred cCCCCCCcccCC
Confidence 379999999864
No 92
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.44 E-value=0.71 Score=23.61 Aligned_cols=12 Identities=17% Similarity=0.656 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvh_A 4 FSCSLCPQRSRD 15 (27)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCcChhhCC
Confidence 379999999863
No 93
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=72.98 E-value=0.74 Score=23.62 Aligned_cols=12 Identities=42% Similarity=1.038 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 4 ~~C~~C~k~f~~ 15 (28)
T 2kvf_A 4 YSCSVCGKRFSL 15 (28)
T ss_dssp EECSSSCCEESC
T ss_pred ccCCCCCcccCC
Confidence 479999999863
No 94
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=71.95 E-value=0.81 Score=23.46 Aligned_cols=12 Identities=25% Similarity=0.897 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.||+.|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 379999999863
No 95
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=71.36 E-value=1 Score=22.87 Aligned_cols=12 Identities=33% Similarity=0.814 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.||+.|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 369999999864
No 96
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=69.95 E-value=0.85 Score=23.43 Aligned_cols=12 Identities=25% Similarity=1.010 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.||+.|..
T Consensus 4 ~~C~~C~~~f~~ 15 (30)
T 2m0d_A 4 YQCDYCGRSFSD 15 (30)
T ss_dssp EECTTTCCEESC
T ss_pred ccCCCCCcccCC
Confidence 369999999863
No 97
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=69.78 E-value=0.8 Score=23.54 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 379999999864
No 98
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=69.48 E-value=0.88 Score=23.23 Aligned_cols=11 Identities=45% Similarity=1.207 Sum_probs=9.3
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|+.|||.|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 2m0f_A 4 KCRECGKQFTT 14 (29)
T ss_dssp ECTTTSCEESC
T ss_pred cCCCCCCccCC
Confidence 79999999863
No 99
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=71.93 E-value=1 Score=23.27 Aligned_cols=11 Identities=18% Similarity=0.667 Sum_probs=9.4
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|..|||.|..
T Consensus 5 ~C~~C~k~f~~ 15 (30)
T 2lvr_A 5 VCIHCQRQFAD 15 (30)
Confidence 79999999864
No 100
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=68.69 E-value=1 Score=24.85 Aligned_cols=12 Identities=17% Similarity=0.775 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 12 ~~C~~C~k~f~~ 23 (37)
T 1p7a_A 12 FQCPDCDRSFSR 23 (37)
T ss_dssp BCCTTTCCCBSS
T ss_pred ccCCCCCcccCc
Confidence 479999999863
No 101
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=68.55 E-value=0.99 Score=24.39 Aligned_cols=11 Identities=27% Similarity=0.785 Sum_probs=9.3
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.+|+.|||.|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 37999999985
No 102
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=68.00 E-value=1.1 Score=22.96 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=9.4
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|..|||.|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 1rik_A 4 ACPECPKRFMR 14 (29)
T ss_dssp ECSSSSCEESC
T ss_pred cCCCCCchhCC
Confidence 69999999864
No 103
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=67.97 E-value=1.1 Score=24.33 Aligned_cols=12 Identities=17% Similarity=0.766 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 1srk_A 8 FVCRICLSAFTT 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCcccCC
Confidence 479999999863
No 104
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=67.67 E-value=1.2 Score=24.34 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=9.3
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|++|||.|..
T Consensus 4 ~C~~C~k~F~~ 14 (33)
T 1rim_A 4 ACPECPKRFMR 14 (33)
T ss_dssp CCSSSCCCCSS
T ss_pred cCCCCCchhCC
Confidence 79999999863
No 105
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=67.65 E-value=1.1 Score=24.14 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 2elx_A 8 YVCALCLKKFVS 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCcchhCC
Confidence 479999999864
No 106
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.59 E-value=1.1 Score=24.76 Aligned_cols=12 Identities=33% Similarity=0.883 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (37)
T 2elo_A 10 YSCPVCEKSFSE 21 (37)
T ss_dssp CEETTTTEECSS
T ss_pred cCCCCCCCccCC
Confidence 479999999864
No 107
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=67.44 E-value=1.2 Score=23.09 Aligned_cols=12 Identities=17% Similarity=0.836 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 379999999864
No 108
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.35 E-value=1.2 Score=24.49 Aligned_cols=12 Identities=25% Similarity=0.969 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elv_A 10 YDCHICERKFKN 21 (36)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCccCC
Confidence 479999999864
No 109
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.67 E-value=1.2 Score=24.25 Aligned_cols=12 Identities=42% Similarity=1.079 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elr_A 10 HLCDMCGKKFKS 21 (36)
T ss_dssp CBCTTTCCBCSS
T ss_pred eecCcCCCCcCc
Confidence 479999999863
No 110
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.79 E-value=1.3 Score=24.44 Aligned_cols=12 Identities=25% Similarity=0.708 Sum_probs=10.1
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (37)
T 2elp_A 10 MKCPYCDFYFMK 21 (37)
T ss_dssp EECSSSSCEECS
T ss_pred eECCCCChhhcc
Confidence 479999999864
No 111
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=65.77 E-value=10 Score=34.78 Aligned_cols=54 Identities=22% Similarity=0.343 Sum_probs=44.0
Q ss_pred chhhccCCceeEeEe-ecC-ccccccceEeeeceEEecceEEEEecCC-CCHHHHHHH
Q psy17692 92 EIEDREQDRRKPAIH-LLG-HHGIEEEVFLSLPCVMADNGVTHIVNQP-LTQEEIEKL 146 (211)
Q Consensus 92 ~~i~~d~~~i~~vs~-l~G-~yGi~~dV~~s~P~vig~~GV~~Ive~i-LsdeE~~iL 146 (211)
+++.+|++..+.+.+ -+| -.|+.+|+++-+||+|+++|+.-+.--. |-+.. +.|
T Consensus 361 ~ai~~~~~~~~~vnv~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~g~~lP~~~-~~l 417 (480)
T 1obb_A 361 DALLNDNKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRV-VKY 417 (480)
T ss_dssp HHHHHCCCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHH-HHH
T ss_pred HHHHhCCCeEEEEEeeCCceeCCCCCCeEEEEEEEEcCCCCEeeccCCCCCHHH-HhH
Confidence 678888888888885 556 5788789999999999999999987666 88873 444
No 112
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.80 E-value=1.2 Score=24.35 Aligned_cols=12 Identities=42% Similarity=1.021 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2els_A 10 FTCEYCNKVFKF 21 (36)
T ss_dssp EECTTTCCEESS
T ss_pred EECCCCCceeCC
Confidence 479999999863
No 113
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.22 E-value=1.4 Score=24.54 Aligned_cols=12 Identities=17% Similarity=0.296 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (37)
T 2elm_A 10 YYCSQCHYSSIT 21 (37)
T ss_dssp EECSSSSCEEEC
T ss_pred eECCCCCcccCC
Confidence 479999999863
No 114
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.66 E-value=1.5 Score=23.84 Aligned_cols=12 Identities=25% Similarity=0.520 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elt_A 10 YKCPQCSYASAI 21 (36)
T ss_dssp EECSSSSCEESS
T ss_pred CCCCCCCcccCC
Confidence 479999999863
No 115
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=63.63 E-value=1.4 Score=26.53 Aligned_cols=11 Identities=55% Similarity=1.365 Sum_probs=9.5
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
+|.+|||.|..
T Consensus 9 ~C~~C~k~F~~ 19 (48)
T 3iuf_A 9 ACDICGKRYKN 19 (48)
T ss_dssp ECTTTCCEESS
T ss_pred ECCCcCcccCC
Confidence 79999999863
No 116
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.07 E-value=1.7 Score=23.78 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elq_A 10 FKCSLCEYATRS 21 (36)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 479999999863
No 117
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=61.35 E-value=1.6 Score=24.52 Aligned_cols=12 Identities=17% Similarity=0.858 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 7 ~~C~~C~k~f~~ 18 (39)
T 1njq_A 7 YTCSFCKREFRS 18 (39)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 118
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=60.16 E-value=2.1 Score=30.66 Aligned_cols=15 Identities=33% Similarity=0.868 Sum_probs=13.4
Q ss_pred ccccceeeccccccc
Q psy17692 195 RDFVKCQVCGKVYKA 209 (211)
Q Consensus 195 ~~~~~~~~~~~~~~~ 209 (211)
-||+.|-.|||.||.
T Consensus 19 ~d~iiClecGK~fK~ 33 (87)
T 2jsp_A 19 DDHIVCLECGGSFKS 33 (87)
T ss_dssp SSCEECTBTCCEESB
T ss_pred CCceEecccchhhHH
Confidence 589999999999984
No 119
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.03 E-value=1.9 Score=24.92 Aligned_cols=12 Identities=33% Similarity=0.866 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (44)
T 2epv_A 13 YECNECGKAFIW 24 (44)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCc
Confidence 379999999864
No 120
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=59.76 E-value=8.7 Score=35.11 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=34.1
Q ss_pred chhhccCCceeEeEe-ecCc-cccccceEeeeceEEecceEEEEe
Q psy17692 92 EIEDREQDRRKPAIH-LLGH-HGIEEEVFLSLPCVMADNGVTHIV 134 (211)
Q Consensus 92 ~~i~~d~~~i~~vs~-l~G~-yGi~~dV~~s~P~vig~~GV~~Iv 134 (211)
++|.+|++.++.+.+ -+|. -++.+|+++.+||+|+++|+.-+-
T Consensus 351 ~AI~~~~~~~~~vNv~N~G~I~nLP~DavVEVpc~Vd~~Gi~P~~ 395 (477)
T 3u95_A 351 NAIANNKRVRLFLNVENQGALKDFPDDLVMELPVWVDSSGIHREK 395 (477)
T ss_dssp HHHHHCCCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECC
T ss_pred HHHhCCCCeEEEEEeecCcccCCCCCCcEEEEEEEEcCCCccccc
Confidence 467778888888875 5564 477679999999999999998753
No 121
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=57.73 E-value=2.1 Score=25.03 Aligned_cols=12 Identities=25% Similarity=0.811 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 9 ~~C~~CgK~F~~ 20 (36)
T 1fv5_A 9 FMCLPCGIAFSS 20 (36)
T ss_dssp CEETTTTEECSC
T ss_pred eECCCCCCccCC
Confidence 479999999864
No 122
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=57.48 E-value=2.2 Score=24.05 Aligned_cols=12 Identities=33% Similarity=0.863 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2epc_A 12 YLCGQCGKSFTQ 23 (42)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCC
Confidence 479999999863
No 123
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.44 E-value=2.5 Score=24.51 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2enf_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 124
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.00 E-value=2.3 Score=24.67 Aligned_cols=12 Identities=33% Similarity=0.946 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emi_A 13 YECSECGKAFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred CCCCCCCcccCC
Confidence 479999999864
No 125
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=2.3 Score=24.67 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2em3_A 13 YECKVCSKAFTQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 126
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.88 E-value=2.3 Score=23.98 Aligned_cols=12 Identities=17% Similarity=0.692 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (42)
T 2yte_A 11 YSCAECKETFSD 22 (42)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCCccCC
Confidence 479999999863
No 127
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.68 E-value=2.5 Score=24.50 Aligned_cols=12 Identities=33% Similarity=1.029 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq2_A 13 YQCNECGKAFSQ 24 (46)
T ss_dssp SSCCSSCCCCSS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 128
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.60 E-value=2.2 Score=24.51 Aligned_cols=12 Identities=33% Similarity=0.999 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (44)
T 2eox_A 13 YNCNECGKAFTR 24 (44)
T ss_dssp EEETTTTEEESS
T ss_pred eECcccCcccCC
Confidence 479999999864
No 129
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.34 E-value=2.7 Score=24.44 Aligned_cols=12 Identities=50% Similarity=1.173 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em6_A 13 YKCDVCGKEFSQ 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred eECCCCCcccCC
Confidence 479999999863
No 130
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.26 E-value=2.4 Score=24.32 Aligned_cols=12 Identities=33% Similarity=0.999 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2yu5_A 13 FKCSKCDRVFTQ 24 (44)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 131
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.18 E-value=2.3 Score=24.38 Aligned_cols=12 Identities=42% Similarity=1.016 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2eoj_A 13 YECCECGKVFSR 24 (44)
T ss_dssp CEETTTTEECSS
T ss_pred eeCCCCCCccCC
Confidence 479999999863
No 132
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=56.02 E-value=2.5 Score=23.95 Aligned_cols=12 Identities=33% Similarity=1.016 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (42)
T 2el5_A 11 YECSECGKAFNR 22 (42)
T ss_dssp EECSSSCCEESS
T ss_pred ccCCCcChhhCC
Confidence 479999999863
No 133
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.84 E-value=2.5 Score=24.59 Aligned_cols=12 Identities=33% Similarity=0.982 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytp_A 13 YECSECGKAFAR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCcccCC
Confidence 479999999864
No 134
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.77 E-value=2.8 Score=24.43 Aligned_cols=12 Identities=58% Similarity=1.359 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eon_A 13 YKCQVCGKAFRV 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred cCCCCCCcccCc
Confidence 379999999864
No 135
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.69 E-value=2.3 Score=24.60 Aligned_cols=12 Identities=42% Similarity=1.146 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (45)
T 2epu_A 13 FECTHCGKSFRA 24 (45)
T ss_dssp EEETTTTEEESS
T ss_pred ccCCCCCCccCC
Confidence 479999999864
No 136
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.68 E-value=2.5 Score=24.57 Aligned_cols=12 Identities=33% Similarity=0.947 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2enh_A 13 YECDVCRKAFSH 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred cCCCCcCchhCC
Confidence 469999999864
No 137
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.52 E-value=2.7 Score=23.80 Aligned_cols=12 Identities=25% Similarity=1.049 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2eos_A 12 YPCEICGTRFRH 23 (42)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCCCCCccCC
Confidence 479999999864
No 138
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.45 E-value=2.5 Score=24.48 Aligned_cols=12 Identities=42% Similarity=1.024 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2emg_A 13 FICSECGKVFTH 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred EECCccCcccCC
Confidence 479999999864
No 139
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.27 E-value=2.3 Score=24.28 Aligned_cols=12 Identities=25% Similarity=0.852 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2eof_A 13 YECNECQKAFNT 24 (44)
T ss_dssp EECTTTCCEESC
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 140
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.27 E-value=2.6 Score=24.39 Aligned_cols=12 Identities=33% Similarity=0.838 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yts_A 13 YICNECGKSFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECCCCChhhCC
Confidence 479999999863
No 141
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.26 E-value=2.6 Score=24.52 Aligned_cols=12 Identities=42% Similarity=1.057 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em4_A 13 YECIECGKAFKT 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCCccCC
Confidence 479999999864
No 142
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=55.23 E-value=2.6 Score=24.52 Aligned_cols=12 Identities=33% Similarity=0.982 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emj_A 13 FECAECGKSFSI 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred EECCCCCcccCC
Confidence 469999999864
No 143
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.17 E-value=2.4 Score=24.66 Aligned_cols=12 Identities=42% Similarity=1.060 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoz_A 13 YSCNVCGKAFVL 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eECcccChhhCC
Confidence 479999999864
No 144
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.03 E-value=2.7 Score=24.37 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2yti_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp TCCSSSCCCCSS
T ss_pred eECCCCCcccCC
Confidence 479999999863
No 145
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.02 E-value=2.4 Score=24.19 Aligned_cols=12 Identities=33% Similarity=1.049 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2en7_A 13 YVCNECGKAFRS 24 (44)
T ss_dssp SCCTTTCCCCSS
T ss_pred eECCCCCCccCC
Confidence 469999999863
No 146
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.87 E-value=2.6 Score=24.47 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2en9_A 13 FKCNECKKTFTQ 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred EECCccCcccCC
Confidence 479999999864
No 147
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.76 E-value=2.7 Score=24.40 Aligned_cols=12 Identities=25% Similarity=0.769 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoh_A 13 YECKECRKTFIQ 24 (46)
T ss_dssp CCCSSSCCCCSS
T ss_pred cCCCCcCchhCC
Confidence 479999999864
No 148
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.65 E-value=2.4 Score=24.00 Aligned_cols=12 Identities=33% Similarity=0.949 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2en2_A 12 YKCETCGARFVQ 23 (42)
T ss_dssp EECTTTCCEESS
T ss_pred EeCCCcChhhCC
Confidence 479999999863
No 149
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.48 E-value=2.7 Score=23.69 Aligned_cols=12 Identities=42% Similarity=1.118 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (41)
T 2ept_A 11 YECQECGKSFRQ 22 (41)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCCcCC
Confidence 369999999863
No 150
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.45 E-value=2.6 Score=23.76 Aligned_cols=12 Identities=33% Similarity=1.079 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2ytb_A 12 YRCDQCGKAFSQ 23 (42)
T ss_dssp BCCTTTTCCBSS
T ss_pred eeCCCccchhCC
Confidence 479999999863
No 151
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.92 E-value=2.9 Score=24.17 Aligned_cols=12 Identities=33% Similarity=0.883 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep1_A 13 YECSDCGKSFIK 24 (46)
T ss_dssp SCCSSSCCCCSS
T ss_pred cCCCCCCchhCC
Confidence 479999999863
No 152
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.67 E-value=2.8 Score=24.33 Aligned_cols=12 Identities=33% Similarity=0.927 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoy_A 13 FKCNKCEKTFSC 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECcCCCCcCCC
Confidence 479999999864
No 153
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.65 E-value=2.8 Score=24.19 Aligned_cols=12 Identities=33% Similarity=1.002 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yrj_A 13 YRCGECGKAFAQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCccCC
Confidence 479999999863
No 154
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.54 E-value=2.6 Score=24.21 Aligned_cols=12 Identities=42% Similarity=1.218 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2eou_A 13 SECQECGKIFRH 24 (44)
T ss_dssp CCCTTTCCCCSS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 155
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.28 E-value=2.6 Score=24.36 Aligned_cols=12 Identities=33% Similarity=0.960 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eor_A 13 YNCEECGKAFIH 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred ccCCCCCCCcCC
Confidence 479999999864
No 156
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.06 E-value=2.7 Score=24.26 Aligned_cols=12 Identities=33% Similarity=1.041 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq3_A 13 YECNQCGKAFSV 24 (46)
T ss_dssp SEETTTTEECSS
T ss_pred eECCCCChhhCC
Confidence 479999999864
No 157
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.67 E-value=2.8 Score=24.31 Aligned_cols=12 Identities=50% Similarity=1.220 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq1_A 13 YKCNECGKAFRA 24 (46)
T ss_dssp CCCTTTTCCCSS
T ss_pred eECCcCChhhCC
Confidence 479999999864
No 158
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=52.64 E-value=3.7 Score=23.77 Aligned_cols=12 Identities=42% Similarity=0.944 Sum_probs=10.1
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ely_A 13 FKCVECGKGFSR 24 (46)
T ss_dssp BCCSSSCCCBSS
T ss_pred cccCccCcccCC
Confidence 479999999874
No 159
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.62 E-value=3 Score=24.07 Aligned_cols=12 Identities=25% Similarity=0.872 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytf_A 13 FECSECQKAFNT 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCcccCC
Confidence 479999999864
No 160
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.40 E-value=3.1 Score=24.18 Aligned_cols=12 Identities=42% Similarity=1.024 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yto_A 13 YKCSDCGKAFTR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECcccCCccCC
Confidence 479999999863
No 161
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.33 E-value=3.1 Score=24.18 Aligned_cols=12 Identities=33% Similarity=0.935 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eom_A 13 HRCSDCGKFFLQ 24 (46)
T ss_dssp CCCSSSCCCCSS
T ss_pred cCCCCCCCeeCC
Confidence 479999999864
No 162
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.06 E-value=2.8 Score=24.03 Aligned_cols=12 Identities=17% Similarity=0.692 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2emb_A 13 YECSKCQATFNL 24 (44)
T ss_dssp EECTTTCCEESC
T ss_pred eECCCCCCccCC
Confidence 479999999864
No 163
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.61 E-value=3.2 Score=23.76 Aligned_cols=12 Identities=25% Similarity=0.861 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (44)
T 2emx_A 11 FGCSCCEKAFSS 22 (44)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCCCcccCC
Confidence 479999999864
No 164
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.60 E-value=3.2 Score=24.01 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emy_A 13 YECHECGKAFSR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCcccCc
Confidence 479999999864
No 165
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.54 E-value=3.5 Score=23.93 Aligned_cols=12 Identities=33% Similarity=1.032 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yth_A 13 FQCEECGKRFTQ 24 (46)
T ss_dssp BCCSSSCCCBSS
T ss_pred CCCCCCCcccCC
Confidence 479999999863
No 166
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=51.53 E-value=3.6 Score=23.86 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emk_A 13 YECKECGKAFSQ 24 (46)
T ss_dssp CBCSSSCCBCSC
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 167
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.42 E-value=3.5 Score=23.65 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (43)
T 2yrm_A 11 FFCNECDCRFSE 22 (43)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCCCCCeeCC
Confidence 479999999863
No 168
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.29 E-value=3.3 Score=23.99 Aligned_cols=12 Identities=42% Similarity=0.971 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2emz_A 13 FKCNECGKGFGR 24 (46)
T ss_dssp CCCSSSCCCCSS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 169
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=51.14 E-value=3 Score=25.36 Aligned_cols=12 Identities=25% Similarity=0.747 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 25 ~~C~~C~k~f~~ 36 (54)
T 1yui_A 25 ATCPICYAVIRQ 36 (54)
T ss_dssp EECTTTCCEESS
T ss_pred ccCCCCCcccCC
Confidence 479999999863
No 170
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.14 E-value=2.9 Score=24.13 Aligned_cols=12 Identities=50% Similarity=1.220 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eow_A 13 YKCNECGKAFRA 24 (46)
T ss_dssp EECTTSCCEESS
T ss_pred eeccccCChhcC
Confidence 479999999864
No 171
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.07 E-value=3.3 Score=23.95 Aligned_cols=12 Identities=33% Similarity=1.035 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep3_A 13 YRCAECGKAFTD 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 172
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=51.05 E-value=3.4 Score=23.89 Aligned_cols=12 Identities=25% Similarity=0.747 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2em0_A 13 WKCRECDMCFSQ 24 (46)
T ss_dssp CCCSSSCCCCSS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 173
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.94 E-value=3.7 Score=23.65 Aligned_cols=12 Identities=42% Similarity=0.910 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eov_A 13 YKCSDCGKSFTW 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCccChhhCC
Confidence 479999999864
No 174
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.92 E-value=3.3 Score=23.93 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2en3_A 13 FQCKECGMNFSW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCcccChhhCC
Confidence 479999999864
No 175
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=50.83 E-value=9 Score=28.23 Aligned_cols=31 Identities=29% Similarity=0.575 Sum_probs=25.0
Q ss_pred CCHHH--HHHHHHHHHHHHhcccc------ceeeccccc
Q psy17692 177 LTQEE--IEKLKKSAQAIKIRDFV------KCQVCGKVY 207 (211)
Q Consensus 177 L~~~E--~~~l~~Sa~~ik~~~~~------~~~~~~~~~ 207 (211)
+++.| .+-|++.+..++..++. +|..||.+|
T Consensus 39 ~~~ke~Vy~hLeHIaksl~r~g~~L~v~p~~C~~CG~~F 77 (105)
T 2gmg_A 39 KGSKKVILEDLKVISKIAKREGMVLLIKPAQCRKCGFVF 77 (105)
T ss_dssp SCCHHHHHHHHHHHHHHHTTTTEEEEECCCBBTTTCCBC
T ss_pred CChHHHHHHHHHHHHHHHhcCCcEEEEECcChhhCcCee
Confidence 35566 57889999999887753 899999998
No 176
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.49 E-value=3.4 Score=23.88 Aligned_cols=12 Identities=42% Similarity=0.969 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em7_A 13 YKCEECGKGFIC 24 (46)
T ss_dssp EECSSSCCEESC
T ss_pred ccCCCccchhCC
Confidence 479999999864
No 177
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.17 E-value=3.5 Score=23.91 Aligned_cols=12 Identities=42% Similarity=1.204 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em2_A 13 FKCKECGKAFRQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECCcCCchhCC
Confidence 479999999864
No 178
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.07 E-value=3.8 Score=23.68 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (47)
T 2epx_A 13 YECIECGKAFIQ 24 (47)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCccCchhCC
Confidence 479999999864
No 179
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.87 E-value=3.5 Score=23.88 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emf_A 13 FECTECGKAFTR 24 (46)
T ss_dssp EECSSSCCEESC
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 180
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.68 E-value=3.6 Score=23.79 Aligned_cols=12 Identities=42% Similarity=1.137 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eml_A 13 YECSVCGKAFSH 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCcCCccCC
Confidence 479999999864
No 181
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.61 E-value=4 Score=23.63 Aligned_cols=12 Identities=50% Similarity=1.065 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2elz_A 13 YKCEDCGKGYNR 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred eeCcccCchhCC
Confidence 479999999863
No 182
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.56 E-value=3.6 Score=23.77 Aligned_cols=12 Identities=50% Similarity=1.223 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ene_A 13 YKCNECGKVFRH 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 183
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.43 E-value=3.6 Score=23.82 Aligned_cols=12 Identities=25% Similarity=0.883 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em5_A 13 HQCHECGRGFTL 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCCccCC
Confidence 479999999864
No 184
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.40 E-value=3.6 Score=23.82 Aligned_cols=12 Identities=33% Similarity=0.850 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eoo_A 13 YGCNECGKNFGR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EEccccCcccCC
Confidence 479999999864
No 185
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.29 E-value=3.8 Score=23.69 Aligned_cols=12 Identities=42% Similarity=1.162 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoq_A 13 FKCDICGKSFCG 24 (46)
T ss_dssp CCCSSSCCCCSS
T ss_pred cCCCcCCchhCC
Confidence 479999999863
No 186
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.22 E-value=4.1 Score=23.58 Aligned_cols=12 Identities=33% Similarity=0.980 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytq_A 13 YGCSECGKAFSS 24 (46)
T ss_dssp CBCSSSCCBCSC
T ss_pred cCCCccChhhCC
Confidence 479999999863
No 187
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.16 E-value=3.4 Score=23.82 Aligned_cols=12 Identities=42% Similarity=1.077 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytr_A 13 YKCNECGKAFSQ 24 (46)
T ss_dssp TCCTTTCCCCSS
T ss_pred cCCCCCCCccCC
Confidence 479999999864
No 188
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.11 E-value=3.7 Score=23.66 Aligned_cols=12 Identities=33% Similarity=0.930 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eop_A 13 HECRECGKSFSF 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred eeCCCCCchhCC
Confidence 479999999864
No 189
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.10 E-value=3.7 Score=23.65 Aligned_cols=12 Identities=42% Similarity=0.913 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2epw_A 13 CKCTECGKAFCW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCCccCC
Confidence 479999999864
No 190
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.95 E-value=3.7 Score=23.77 Aligned_cols=12 Identities=58% Similarity=1.071 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em8_A 13 YKCVECGKGYKR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECcccCchhCC
Confidence 479999999864
No 191
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.76 E-value=3.7 Score=23.86 Aligned_cols=12 Identities=42% Similarity=0.993 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytm_A 13 YKCMECGKAFGD 24 (46)
T ss_dssp SSBTTTTBCCSS
T ss_pred cCCCCCCchhCC
Confidence 479999999864
No 192
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.73 E-value=3.5 Score=23.75 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eoe_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp SEETTTTEECSS
T ss_pred eECCCcChhhCC
Confidence 479999999864
No 193
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.65 E-value=3.9 Score=23.68 Aligned_cols=12 Identities=33% Similarity=1.005 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytt_A 13 YQCSECGKSFSG 24 (46)
T ss_dssp TCCSSSCCCCSS
T ss_pred eeCCCCCcccCC
Confidence 479999999864
No 194
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.60 E-value=3.4 Score=23.88 Aligned_cols=12 Identities=50% Similarity=1.243 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eq0_A 13 YKCHECGKVFRR 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 195
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.49 E-value=3.8 Score=23.65 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytk_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EeCCcCCCccCC
Confidence 479999999864
No 196
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.41 E-value=3.5 Score=23.86 Aligned_cols=12 Identities=42% Similarity=1.054 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emh_A 13 YICTVCGKAFTD 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred cCCCCCCchhCC
Confidence 479999999864
No 197
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=3.8 Score=23.64 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytj_A 13 YICAECGKAFTI 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCChhhCC
Confidence 479999999864
No 198
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=3.8 Score=23.64 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yu8_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCchhCC
Confidence 479999999864
No 199
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.24 E-value=3.8 Score=23.69 Aligned_cols=12 Identities=33% Similarity=0.933 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|++|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2epz_A 13 FDCIDCGKAFSD 24 (46)
T ss_dssp BCCTTTCCCBSS
T ss_pred eECCCCCceeCC
Confidence 479999999864
No 200
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.23 E-value=3.9 Score=23.62 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytn_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCCeeCC
Confidence 479999999863
No 201
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=47.98 E-value=3.9 Score=23.59 Aligned_cols=12 Identities=50% Similarity=1.157 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ema_A 13 YKCNECGKVFSR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCcchhCC
Confidence 479999999864
No 202
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=47.95 E-value=3.9 Score=23.52 Aligned_cols=12 Identities=33% Similarity=0.980 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em9_A 13 YNCKECGKSFRW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCccccccCC
Confidence 479999999864
No 203
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.86 E-value=3.7 Score=23.73 Aligned_cols=12 Identities=50% Similarity=1.146 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ysp_A 13 YKCEKCGKGYNS 24 (46)
T ss_dssp EEETTTTEEESC
T ss_pred eECCCCCCccCC
Confidence 479999999864
No 204
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=47.85 E-value=7.5 Score=34.66 Aligned_cols=41 Identities=22% Similarity=0.528 Sum_probs=33.2
Q ss_pred CceeEEecCCCCHHHHHHHHHHHHHHHhc-------cccceeeccccc
Q psy17692 167 NGVTHIVNQPLTQEEIEKLKKSAQAIKIR-------DFVKCQVCGKVY 207 (211)
Q Consensus 167 ~Gv~~ii~l~L~~~E~~~l~~Sa~~ik~~-------~~~~~~~~~~~~ 207 (211)
+||.-.+.++||++=.+.++-+-+.||.. +|+-|+-||...
T Consensus 234 dGIGDTIRVSLt~~p~~Ev~va~~ILqslglR~~g~~~ISCPtCGRt~ 281 (366)
T 3noy_A 234 MGIGDTVRVSLTDDPVVEVETAYEILKSLGLRRRGVEIVACPTCGRIE 281 (366)
T ss_dssp TTCCSEECCCCSSCHHHHHHHHHHHHHHTTSCCSSCEEEECCCCTTCC
T ss_pred hcccceEEEeCCCCcHHHHHHHHHHHHhcCCCcCCCEEEECCCCCCcc
Confidence 68888888899976677777777788776 789999999864
No 205
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.66 E-value=4 Score=23.55 Aligned_cols=12 Identities=42% Similarity=1.005 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2enc_A 13 FKCEECGKGFYT 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCCcCCC
Confidence 479999999864
No 206
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.24 E-value=4.1 Score=23.50 Aligned_cols=12 Identities=42% Similarity=1.065 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytd_A 13 YKCSECGKAFHR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCeeCC
Confidence 479999999863
No 207
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.09 E-value=4.1 Score=23.49 Aligned_cols=12 Identities=33% Similarity=1.110 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep2_A 13 YECSICGKSFTK 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCcccCC
Confidence 469999999864
No 208
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=47.05 E-value=4.1 Score=23.55 Aligned_cols=12 Identities=33% Similarity=0.858 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2el6_A 13 YKCSQCEKSFSG 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 209
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=46.79 E-value=4.2 Score=23.39 Aligned_cols=12 Identities=25% Similarity=0.755 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2el4_A 13 YGCSQCAKTFSL 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 210
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.63 E-value=4.3 Score=23.43 Aligned_cols=12 Identities=33% Similarity=0.957 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2emp_A 13 YMCNECGKAFSV 24 (46)
T ss_dssp EECSSSCCEESC
T ss_pred eECCCCCchhCC
Confidence 479999999864
No 211
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.62 E-value=4.3 Score=23.37 Aligned_cols=12 Identities=42% Similarity=0.960 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2emm_A 13 HKCNECGKSFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCChhhCC
Confidence 479999999864
No 212
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.46 E-value=3.9 Score=23.63 Aligned_cols=12 Identities=25% Similarity=0.960 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yso_A 13 HQCRECGEIFFQ 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred EEccccChhhCC
Confidence 479999999863
No 213
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.33 E-value=4.2 Score=23.37 Aligned_cols=12 Identities=33% Similarity=0.991 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq4_A 13 YNCKECGKSFSR 24 (46)
T ss_dssp CCBTTTTBCCSC
T ss_pred eECCCCCCccCc
Confidence 479999999864
No 214
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.31 E-value=3.9 Score=23.61 Aligned_cols=12 Identities=50% Similarity=1.126 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytg_A 13 FKCGECGKSYNQ 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCcccCC
Confidence 479999999864
No 215
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.25 E-value=4 Score=23.54 Aligned_cols=12 Identities=33% Similarity=0.955 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en6_A 13 YGCNECGKTFSQ 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eECCCCCcccCc
Confidence 479999999864
No 216
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.16 E-value=4.4 Score=23.38 Aligned_cols=12 Identities=42% Similarity=0.993 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep0_A 13 YKCDVCHKSFRY 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCcccCcccCC
Confidence 479999999864
No 217
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.01 E-value=4 Score=23.51 Aligned_cols=12 Identities=33% Similarity=0.772 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en8_A 13 HTCDECGKNFCY 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCcCcccCC
Confidence 479999999863
No 218
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.71 E-value=4.5 Score=23.26 Aligned_cols=12 Identities=33% Similarity=0.908 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eme_A 13 YVCDYCGKAFGL 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCChhhCC
Confidence 479999999863
No 219
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.67 E-value=4.5 Score=23.28 Aligned_cols=12 Identities=42% Similarity=0.982 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 11 ~~C~~C~k~f~~ 22 (45)
T 2epq_A 11 YSCPVCGLRFKR 22 (45)
T ss_dssp SEETTTTEECSC
T ss_pred CcCCCCCcccCC
Confidence 479999999864
No 220
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.47 E-value=4.5 Score=23.34 Aligned_cols=12 Identities=42% Similarity=1.079 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en1_A 13 FKCEECGKRFTQ 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eeCCCCCcccCC
Confidence 479999999864
No 221
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=43.18 E-value=5.4 Score=19.99 Aligned_cols=11 Identities=27% Similarity=1.035 Sum_probs=9.4
Q ss_pred cee--eccccccc
Q psy17692 199 KCQ--VCGKVYKA 209 (211)
Q Consensus 199 ~~~--~~~~~~~~ 209 (211)
+|. .|||.|..
T Consensus 4 ~C~~~~C~k~f~~ 16 (29)
T 2ab3_A 4 VCHFENCGRSFND 16 (29)
T ss_dssp EECSTTTCEEESS
T ss_pred CCcCCcCcCccCC
Confidence 799 99999864
No 222
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=42.95 E-value=4.9 Score=23.59 Aligned_cols=12 Identities=42% Similarity=1.420 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 13 ~~C~~C~k~f~~ 24 (48)
T 2epr_A 13 VACEICGKIFRD 24 (48)
T ss_dssp EEETTTTEEESS
T ss_pred eeCCCCCcccCC
Confidence 479999999863
No 223
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=42.37 E-value=4.9 Score=25.88 Aligned_cols=16 Identities=31% Similarity=0.777 Sum_probs=11.6
Q ss_pred Hhccccceeeccccccc
Q psy17692 193 KIRDFVKCQVCGKVYKA 209 (211)
Q Consensus 193 k~~~~~~~~~~~~~~~~ 209 (211)
.++.| +|++|||.|..
T Consensus 29 ~ekp~-~C~~C~k~F~~ 44 (60)
T 4gzn_C 29 GYRPR-SCPECGKCFRD 44 (60)
T ss_dssp TCCCE-ECTTTCCEESS
T ss_pred CCcCe-ECCCCCCCcCC
Confidence 34444 79999999864
No 224
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=41.99 E-value=15 Score=29.38 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=34.2
Q ss_pred HHHHHhhHHhH-Hhhhccccee------ecCCceeEEecCCCC--HHHHHHHHHHHHHHHh-cc-------ccceeeccc
Q psy17692 143 IEKLKKSAQAI-KEVFLSLPCV------MADNGVTHIVNQPLT--QEEIEKLKKSAQAIKI-RD-------FVKCQVCGK 205 (211)
Q Consensus 143 ~~iL~~Sa~~l-~~~~~svP~v------lg~~Gv~~ii~l~L~--~~E~~~l~~Sa~~ik~-~~-------~~~~~~~~~ 205 (211)
.+.|..+.++. +......|.. -|-..+...+..-+. .++.+.+++..+.|+. ++ ..+|.+||-
T Consensus 84 ~e~l~~al~~E~~e~t~~y~~~~~~A~eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~l~~~~~~~~~~~~~~~C~~CG~ 163 (191)
T 1lko_A 84 HANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLREQATKWRCRNCGY 163 (191)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEEETTTCC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCceEEECCCCC
Confidence 46666666444 3333323222 222233333333233 2333667777766664 33 467999999
Q ss_pred ccc
Q psy17692 206 VYK 208 (211)
Q Consensus 206 ~~~ 208 (211)
+|.
T Consensus 164 ~~~ 166 (191)
T 1lko_A 164 VHE 166 (191)
T ss_dssp EEE
T ss_pred Eee
Confidence 884
No 225
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.94 E-value=5.2 Score=26.53 Aligned_cols=12 Identities=42% Similarity=1.196 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 14 y~C~~CgK~F~~ 25 (66)
T 2epp_A 14 LPCGLCGKVFTD 25 (66)
T ss_dssp CCCTTTCCCCSC
T ss_pred cCCCCCCCccCC
Confidence 479999999864
No 226
>2kq9_A DNAK suppressor protein; zinc binding protein, structural genomics, PSI-2, protein ST initiative; NMR {Agrobacterium tumefaciens str}
Probab=40.98 E-value=16 Score=26.69 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=23.4
Q ss_pred cCCCCHHHHH---HHHHHHHHHHhccccceeecccc
Q psy17692 174 NQPLTQEEIE---KLKKSAQAIKIRDFVKCQVCGKV 206 (211)
Q Consensus 174 ~l~L~~~E~~---~l~~Sa~~ik~~~~~~~~~~~~~ 206 (211)
...|...+++ ++..+-..|..-.|-.|..||+-
T Consensus 55 ~~al~~r~r~~L~~i~~Al~ri~~g~yg~C~~Cg~~ 90 (112)
T 2kq9_A 55 LDELGQVGQDELRAIDAALARIASGTFGTCVKCGKR 90 (112)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHTCCSEETTTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCcCeeCCCCCc
Confidence 3456666554 44556667777899999999974
No 227
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=39.82 E-value=16 Score=22.47 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=17.7
Q ss_pred EEecCCCCHHHHHHHHHHHHH
Q psy17692 171 HIVNQPLTQEEIEKLKKSAQA 191 (211)
Q Consensus 171 ~ii~l~L~~~E~~~l~~Sa~~ 191 (211)
..+.+.||++|.+.|++-|+.
T Consensus 16 ~~i~vRlt~eE~~~l~~~A~~ 36 (51)
T 2ba3_A 16 VVRTLRFSPVEDETIRKKAED 36 (51)
T ss_dssp EEEEEEECHHHHHHHHHHHHH
T ss_pred eeEEEEECHHHHHHHHHHHHH
Confidence 467889999999999987764
No 228
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=39.62 E-value=6.2 Score=23.87 Aligned_cols=11 Identities=36% Similarity=0.253 Sum_probs=9.2
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.+|.+|||.|.
T Consensus 42 ~~C~~C~k~F~ 52 (54)
T 2eps_A 42 HKCQVWVSGPS 52 (54)
T ss_dssp CCSSSSCCSSC
T ss_pred ccCCCCCCCCC
Confidence 47999999885
No 229
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.04 E-value=7.5 Score=26.67 Aligned_cols=12 Identities=50% Similarity=1.077 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|+.
T Consensus 55 ~~C~~C~k~F~~ 66 (98)
T 2gqj_A 55 LKCQHCRKQFKS 66 (98)
T ss_dssp HSCSSSCCCCSC
T ss_pred EECCCCCCccCC
Confidence 479999999863
No 230
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=36.52 E-value=9 Score=23.99 Aligned_cols=12 Identities=17% Similarity=0.634 Sum_probs=8.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 40 ~~C~~C~k~f~~ 51 (62)
T 1vd4_A 40 FRCTFCHTEVEE 51 (62)
T ss_dssp EBCSSSCCBCEE
T ss_pred EECCCCCCcccc
Confidence 468888887753
No 231
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=36.07 E-value=7.2 Score=24.41 Aligned_cols=12 Identities=42% Similarity=0.885 Sum_probs=9.7
Q ss_pred ccceeecccccc
Q psy17692 197 FVKCQVCGKVYK 208 (211)
Q Consensus 197 ~~~~~~~~~~~~ 208 (211)
-.+|.+||-+|.
T Consensus 4 ~y~C~vCGyvyd 15 (46)
T 6rxn_A 4 KYVCNVCGYEYD 15 (46)
T ss_dssp CEEETTTCCEEC
T ss_pred EEECCCCCeEEe
Confidence 347999999985
No 232
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=35.95 E-value=7.1 Score=24.23 Aligned_cols=10 Identities=50% Similarity=1.497 Sum_probs=7.6
Q ss_pred ceeecccccc
Q psy17692 199 KCQVCGKVYK 208 (211)
Q Consensus 199 ~~~~~~~~~~ 208 (211)
+|+.|||.|.
T Consensus 12 ~C~~C~k~f~ 21 (66)
T 2drp_A 12 RCKVCSRVYT 21 (66)
T ss_dssp ECTTTCCEES
T ss_pred ECCCCcchhC
Confidence 6888888775
No 233
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=35.60 E-value=7.3 Score=24.93 Aligned_cols=12 Identities=25% Similarity=1.065 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 46 ~~C~~C~k~f~~ 57 (74)
T 2lce_A 46 YRCNICGAQFNR 57 (74)
T ss_dssp EECTTTCCEESC
T ss_pred EECCCCCchhCC
Confidence 579999998863
No 234
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=35.52 E-value=8.1 Score=23.10 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..||+.|..
T Consensus 33 ~~C~~C~~~f~~ 44 (57)
T 3uk3_C 33 YKCEFCEYAAAQ 44 (57)
T ss_dssp EECSSSSCEESS
T ss_pred cCCCCCcchhCC
Confidence 579999999863
No 235
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=35.39 E-value=6.6 Score=23.02 Aligned_cols=15 Identities=40% Similarity=0.908 Sum_probs=11.7
Q ss_pred Hhccccceeeccccc
Q psy17692 193 KIRDFVKCQVCGKVY 207 (211)
Q Consensus 193 k~~~~~~~~~~~~~~ 207 (211)
|..+|.||..||.+.
T Consensus 2 k~~~fY~C~~CGniv 16 (36)
T 1dxg_A 2 NEGDVYKCELCGQVV 16 (36)
T ss_dssp CTTCEEECTTTCCEE
T ss_pred CcccEEEcCCCCcEE
Confidence 346899999999754
No 236
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=35.29 E-value=7.4 Score=24.69 Aligned_cols=12 Identities=17% Similarity=0.855 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 50 ~~C~~C~~~f~~ 61 (73)
T 1f2i_G 50 FQCRICMRNFSR 61 (73)
T ss_dssp EECTTTCCEESC
T ss_pred eECCCCCchhCC
Confidence 479999999863
No 237
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=35.19 E-value=21 Score=25.57 Aligned_cols=27 Identities=33% Similarity=0.604 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhccccceeeccccc
Q psy17692 180 EEIEKLKKSAQAIKIRDFVKCQVCGKVY 207 (211)
Q Consensus 180 ~E~~~l~~Sa~~ik~~~~~~~~~~~~~~ 207 (211)
.+.+.+++....+.. |--.|++||...
T Consensus 31 ~~i~~l~~~l~~l~~-~g~~CPvCgs~l 57 (112)
T 1l8d_A 31 NKIGDLKTAIEELKK-AKGKCPVCGREL 57 (112)
T ss_dssp HHHHHHHHHHHHHTT-CSEECTTTCCEE
T ss_pred HHHHHHHHHHHHhhc-CCCCCCCCCCcC
Confidence 355556665555543 466799999753
No 238
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.81 E-value=7.6 Score=26.80 Aligned_cols=10 Identities=40% Similarity=1.185 Sum_probs=8.2
Q ss_pred ceeecccccc
Q psy17692 199 KCQVCGKVYK 208 (211)
Q Consensus 199 ~~~~~~~~~~ 208 (211)
+|++|||.|.
T Consensus 30 ~C~~Cgk~F~ 39 (85)
T 2lv2_A 30 LCPVCGESFA 39 (85)
T ss_dssp ECTTSCCEES
T ss_pred ECCCCCCCcC
Confidence 6888888885
No 239
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=34.80 E-value=9.3 Score=19.66 Aligned_cols=11 Identities=36% Similarity=0.996 Sum_probs=9.0
Q ss_pred cee--eccccccc
Q psy17692 199 KCQ--VCGKVYKA 209 (211)
Q Consensus 199 ~~~--~~~~~~~~ 209 (211)
+|. .|||.|..
T Consensus 4 ~C~~~~C~k~f~~ 16 (31)
T 1sp2_A 4 MCTWSYCGKRFTR 16 (31)
T ss_dssp BCCSTTCCCBCSS
T ss_pred CCcCCCCCcccCC
Confidence 687 99999863
No 240
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=34.77 E-value=36 Score=26.23 Aligned_cols=87 Identities=17% Similarity=0.225 Sum_probs=48.0
Q ss_pred eeeceEEe-cceEEEEecC-CCCHHH-HHHHHhhH-HhHHhhhc-----ccceeecCCceeEEecCCCCHHHHHHHHHHH
Q psy17692 119 LSLPCVMA-DNGVTHIVNQ-PLTQEE-IEKLKKSA-QAIKEVFL-----SLPCVMADNGVTHIVNQPLTQEEIEKLKKSA 189 (211)
Q Consensus 119 ~s~P~vig-~~GV~~Ive~-iLsdeE-~~iL~~Sa-~~l~~~~~-----svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa 189 (211)
-|+|..+. ...-.++.+. .++++= +.+|+.-- +.++.... ++|...-.+-+ -.-.+++||++-|++--
T Consensus 21 ~gFPL~~~~~~~~~~~~e~~efnpeFi~~mlpkldW~aL~~aA~~lg~~~LP~~~pe~~~---~~~~~~dee~~~Lk~lH 97 (141)
T 2j6a_A 21 DNFPLQYDGSKCQLVQDESIEFNPEFLLNIVDRVDWPAVLTVAAELGNNALPPTKPSFPS---SIQELTDDDMAILNDLH 97 (141)
T ss_dssp TSSSCEECTTTCEEEECTTSCCCHHHHHHHHHHSCHHHHHHHHHHTTCCCSCSSCCCCCS---SGGGCCHHHHHHHHHHH
T ss_pred CCcceeeccccceeEEcccccCCHHHHHHHHhhcCHHHHHHHHHHhCCccCCCcCCcccc---cccccCchHHHHHHHHH
Confidence 56787773 4555667777 777642 33343322 33333332 35544432200 01137788855666555
Q ss_pred HHHHh----ccccceeecccccc
Q psy17692 190 QAIKI----RDFVKCQVCGKVYK 208 (211)
Q Consensus 190 ~~ik~----~~~~~~~~~~~~~~ 208 (211)
..+-. .+...|..||..|-
T Consensus 98 h~lle~~v~eg~L~C~~cg~~YP 120 (141)
T 2j6a_A 98 TLLLQTSIAEGEMKCRNCGHIYY 120 (141)
T ss_dssp HHHTTEEEEEEEEECTTTCCEEE
T ss_pred HHHhheeccCCEEECCCCCCccc
Confidence 55544 55688999999984
No 241
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=34.25 E-value=7.5 Score=20.18 Aligned_cols=11 Identities=27% Similarity=0.815 Sum_probs=9.2
Q ss_pred cee--eccccccc
Q psy17692 199 KCQ--VCGKVYKA 209 (211)
Q Consensus 199 ~~~--~~~~~~~~ 209 (211)
+|+ .|||.|..
T Consensus 5 ~C~~~~C~k~f~~ 17 (32)
T 1zfd_A 5 SCDHPGCDKAFVR 17 (32)
T ss_dssp CCCCTTCCCCBSS
T ss_pred cCcCCCCCCccCC
Confidence 698 89999864
No 242
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.11 E-value=8.7 Score=24.73 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 46 ~~C~~C~~~f~~ 57 (77)
T 2ct1_A 46 FHCPHCDTVIAR 57 (77)
T ss_dssp EECSSSSCEESS
T ss_pred cCCCCCCCccCC
Confidence 589999999863
No 243
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=33.04 E-value=15 Score=29.67 Aligned_cols=26 Identities=27% Similarity=0.570 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHh---ccccceeecccccc
Q psy17692 183 EKLKKSAQAIKI---RDFVKCQVCGKVYK 208 (211)
Q Consensus 183 ~~l~~Sa~~ik~---~~~~~~~~~~~~~~ 208 (211)
+.|++-.+.|+. -.+.+|.+||-+|.
T Consensus 154 ~~~~~ll~~l~~~~~~~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 154 ERYLAAYNDIDAPDDDKFHLCPICGYIHK 182 (202)
T ss_dssp HHHHHHHHTTTCCCSCCEEECSSSCCEEE
T ss_pred HHHHHHHHHHhcCCCCcEEEECCCCCEEc
Confidence 556665555543 23678999999885
No 244
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=32.45 E-value=9.7 Score=22.72 Aligned_cols=12 Identities=25% Similarity=0.733 Sum_probs=9.8
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..||+.|..
T Consensus 30 ~~C~~C~~~f~~ 41 (57)
T 1bbo_A 30 YHCTYCNFSFKT 41 (57)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCCCchhcC
Confidence 579999999863
No 245
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=32.35 E-value=24 Score=27.71 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=28.3
Q ss_pred ecCCceeEEecCCCCHHHH--HHHHHHHHHHHh-cc-----ccceeecccccc
Q psy17692 164 MADNGVTHIVNQPLTQEEI--EKLKKSAQAIKI-RD-----FVKCQVCGKVYK 208 (211)
Q Consensus 164 lg~~Gv~~ii~l~L~~~E~--~~l~~Sa~~ik~-~~-----~~~~~~~~~~~~ 208 (211)
-|-..+...+..-+.+|+. +.|++-.+.|+. ++ +.+|.+||-+|.
T Consensus 97 eg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~~~~~~~~~C~~CG~i~~ 149 (170)
T 3pwf_A 97 QGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGEDIEIKKVYICPICGYTAV 149 (170)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCSCEEECTTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCeeEeCCCCCeeC
Confidence 3444555555554444443 677777777765 34 356999999885
No 246
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.16 E-value=9.9 Score=24.18 Aligned_cols=11 Identities=36% Similarity=0.984 Sum_probs=8.6
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.+|+.|+|.|.
T Consensus 15 ~~C~~C~k~f~ 25 (72)
T 1x6e_A 15 YGCVECGKAFS 25 (72)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCCCCccC
Confidence 47888888875
No 247
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=32.03 E-value=29 Score=26.87 Aligned_cols=23 Identities=30% Similarity=0.663 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhccccceeecccc
Q psy17692 184 KLKKSAQAIKIRDFVKCQVCGKV 206 (211)
Q Consensus 184 ~l~~Sa~~ik~~~~~~~~~~~~~ 206 (211)
++..+...|.+-.|-.|..||.-
T Consensus 98 ~i~~Al~ri~~g~yg~C~~Cg~~ 120 (151)
T 1tjl_A 98 KIEKTLKKVEDEDFGYCESCGVE 120 (151)
T ss_dssp HHHHHHHHHHTTCCSBCSSSSCB
T ss_pred HHHHHHHHHhCCCCceeCCCCCc
Confidence 34445556667789999999974
No 248
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.47 E-value=10 Score=23.87 Aligned_cols=12 Identities=33% Similarity=0.589 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|++.|..
T Consensus 38 ~~C~~C~~~f~~ 49 (70)
T 1x5w_A 38 FKCNYCSFDTKQ 49 (70)
T ss_dssp EECSSSSCEESS
T ss_pred EeCCCCCCccCC
Confidence 589999999863
No 249
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=31.30 E-value=11 Score=20.55 Aligned_cols=12 Identities=50% Similarity=1.184 Sum_probs=9.2
Q ss_pred cceee--ccccccc
Q psy17692 198 VKCQV--CGKVYKA 209 (211)
Q Consensus 198 ~~~~~--~~~~~~~ 209 (211)
.+|++ |||.|..
T Consensus 9 ~~C~~~~C~k~f~~ 22 (37)
T 1va1_A 9 HICHIQGCGKVYGK 22 (37)
T ss_dssp EECCSTTCCCEESC
T ss_pred CCCCCCCCCCccCC
Confidence 36985 9999863
No 250
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=30.95 E-value=9.9 Score=25.76 Aligned_cols=14 Identities=29% Similarity=0.750 Sum_probs=11.9
Q ss_pred ccccceeecccccc
Q psy17692 195 RDFVKCQVCGKVYK 208 (211)
Q Consensus 195 ~~~~~~~~~~~~~~ 208 (211)
-.++.|..||..|+
T Consensus 38 ~g~~~CpYCg~~f~ 51 (67)
T 2jrr_A 38 TGWVECPYCDCKYV 51 (67)
T ss_dssp TSEEEETTTTEEEE
T ss_pred CCeEECCCCCCEEE
Confidence 46889999999886
No 251
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=30.34 E-value=10 Score=22.99 Aligned_cols=12 Identities=17% Similarity=0.830 Sum_probs=9.7
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.||+.|..
T Consensus 31 ~~C~~C~~~f~~ 42 (60)
T 2adr_A 31 YPCGLCNRAFTR 42 (60)
T ss_dssp EECTTTCCEESS
T ss_pred ccCCCCCCccCC
Confidence 479999999853
No 252
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.31 E-value=11 Score=24.29 Aligned_cols=12 Identities=33% Similarity=1.054 Sum_probs=10.0
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 39 ~~C~~C~k~f~~ 50 (78)
T 2d9h_A 39 FPCEFCGKRFEK 50 (78)
T ss_dssp EECTTTCCEESS
T ss_pred cCCCCCCchhCC
Confidence 489999999863
No 253
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=29.02 E-value=1.1e+02 Score=22.35 Aligned_cols=57 Identities=23% Similarity=0.437 Sum_probs=45.1
Q ss_pred EecceEEEEecCCCCHHHHHHHHhhHHhHHhhhcccceeecCCceeEEecCCCCHHHHHHHHHHHHH
Q psy17692 125 MADNGVTHIVNQPLTQEEIEKLKKSAQAIKEVFLSLPCVMADNGVTHIVNQPLTQEEIEKLKKSAQA 191 (211)
Q Consensus 125 ig~~GV~~Ive~iLsdeE~~iL~~Sa~~l~~~~~svP~vlg~~Gv~~ii~l~L~~~E~~~l~~Sa~~ 191 (211)
|-.+|..+|.....++++.+.|.. .++-+..+.+| --.+.++.|+++.+.+...++.
T Consensus 51 i~n~G~fRI~gYk~se~~~~~f~s---------lGm~~K~~~~g-NtYiDi~~s~eNI~~ii~~~~~ 107 (108)
T 1kaf_A 51 INNNGNMRIFGYKMMEHHIQKFTD---------IGMSCKIAKNG-NVYLDIKRSAENIEAVITVASE 107 (108)
T ss_dssp ECTTSEEEEEEESCCHHHHHHHHT---------TTCEEEECTTS-EEEEEEECCHHHHHHHHHHHHT
T ss_pred EecCCcEEEEEecCCHHHHHHHHh---------cCceEEEcCCC-cEEEeccccHHHHHHHHhhhcc
Confidence 445899999999999987555532 26668899999 7778999999999988776653
No 254
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=27.83 E-value=12 Score=26.25 Aligned_cols=14 Identities=29% Similarity=0.781 Sum_probs=11.2
Q ss_pred ccccceeecccccc
Q psy17692 195 RDFVKCQVCGKVYK 208 (211)
Q Consensus 195 ~~~~~~~~~~~~~~ 208 (211)
-+..+|.+||-+|-
T Consensus 25 m~~y~C~vCGyvYD 38 (81)
T 2kn9_A 25 YKLFRCIQCGFEYD 38 (81)
T ss_dssp CCEEEETTTCCEEE
T ss_pred cceEEeCCCCEEEc
Confidence 34578999999985
No 255
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.00 E-value=14 Score=23.53 Aligned_cols=10 Identities=20% Similarity=0.444 Sum_probs=8.3
Q ss_pred cceeeccccc
Q psy17692 198 VKCQVCGKVY 207 (211)
Q Consensus 198 ~~~~~~~~~~ 207 (211)
-+|+.|||.|
T Consensus 69 ~~C~~C~k~F 78 (79)
T 2dlk_A 69 YICEFSGPSS 78 (79)
T ss_dssp CSCCSSSCCC
T ss_pred eeCCCCCCCC
Confidence 4799999887
No 256
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=26.97 E-value=14 Score=25.94 Aligned_cols=14 Identities=36% Similarity=0.925 Sum_probs=10.7
Q ss_pred ccccceeecccccc
Q psy17692 195 RDFVKCQVCGKVYK 208 (211)
Q Consensus 195 ~~~~~~~~~~~~~~ 208 (211)
-+++.|..||..|+
T Consensus 51 ~g~~~CpYCg~~f~ 64 (80)
T 2jvm_A 51 TGFVECGYCDRRYI 64 (80)
T ss_dssp TCEEECSSSSCEEE
T ss_pred CCeEECCCCCCEEE
Confidence 36788888888775
No 257
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.80 E-value=16 Score=22.70 Aligned_cols=12 Identities=33% Similarity=0.921 Sum_probs=9.4
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|+.|||.|..
T Consensus 19 ~~C~~C~k~f~~ 30 (73)
T 2ctu_A 19 QKCSKCGIIFIR 30 (73)
T ss_dssp EECSSSCCEEEC
T ss_pred eeCCcccchhCC
Confidence 478999988864
No 258
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.78 E-value=30 Score=23.79 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=10.2
Q ss_pred hccccceeeccccc
Q psy17692 194 IRDFVKCQVCGKVY 207 (211)
Q Consensus 194 ~~~~~~~~~~~~~~ 207 (211)
+..-.+|..|||.|
T Consensus 31 ~~~~~~C~~C~k~F 44 (96)
T 2ctd_A 31 DKGSVSCPTCQAVG 44 (96)
T ss_dssp HTSCEECTTTCSCE
T ss_pred CCCCcCCCCCCCCc
Confidence 34445888888888
No 259
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.61 E-value=15 Score=23.46 Aligned_cols=11 Identities=45% Similarity=1.153 Sum_probs=8.8
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.+|.+|||.|.
T Consensus 19 ~~C~~C~~~f~ 29 (77)
T 2cot_A 19 YKCDECGKSFS 29 (77)
T ss_dssp SBCSSSCCBCS
T ss_pred EECCCCCcccC
Confidence 47889998885
No 260
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=24.98 E-value=14 Score=26.19 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=12.2
Q ss_pred Hhccccceeecccccc
Q psy17692 193 KIRDFVKCQVCGKVYK 208 (211)
Q Consensus 193 k~~~~~~~~~~~~~~~ 208 (211)
..-+...|.+||-+|-
T Consensus 31 ~~m~~y~C~vCGyvYD 46 (87)
T 1s24_A 31 KAYLKWICITCGHIYD 46 (87)
T ss_dssp -CCCEEEETTTTEEEE
T ss_pred cCCceEECCCCCeEec
Confidence 3456688999999985
No 261
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=24.77 E-value=26 Score=19.78 Aligned_cols=19 Identities=42% Similarity=0.707 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHhccccc
Q psy17692 181 EIEKLKKSAQAIKIRDFVK 199 (211)
Q Consensus 181 E~~~l~~Sa~~ik~~~~~~ 199 (211)
|.++|++-.+.++.|.|.-
T Consensus 2 evqalkkrvqalkarnyaa 20 (33)
T 1fmh_B 2 EVQALKKRVQALKARNYAA 20 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhHHH
Confidence 6788999999999999863
No 262
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.53 E-value=16 Score=25.05 Aligned_cols=12 Identities=17% Similarity=0.667 Sum_probs=9.9
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+|||.|..
T Consensus 26 y~C~~C~k~F~~ 37 (88)
T 1x6f_A 26 YQCKHCDSKLQS 37 (88)
T ss_dssp EECSSSCCEESS
T ss_pred CcCCCCCCEeCC
Confidence 479999999863
No 263
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.07 E-value=19 Score=23.85 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.3
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|..
T Consensus 63 ~~C~~C~k~f~~ 74 (95)
T 2ej4_A 63 EECPREGKSFKA 74 (95)
T ss_dssp TTCSSTTCCCSS
T ss_pred cCCCCCCcccCC
Confidence 689999999863
No 264
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.03 E-value=16 Score=26.03 Aligned_cols=12 Identities=25% Similarity=0.456 Sum_probs=10.1
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|..|||.|+.
T Consensus 51 f~C~~Cgk~F~~ 62 (102)
T 2ghf_A 51 YVCVECNFLTKR 62 (102)
T ss_dssp EEETTTTEEESS
T ss_pred cCCCCCCcccCC
Confidence 589999999863
No 265
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.02 E-value=19 Score=24.81 Aligned_cols=14 Identities=7% Similarity=-0.154 Sum_probs=11.3
Q ss_pred hccccceeeccccc
Q psy17692 194 IRDFVKCQVCGKVY 207 (211)
Q Consensus 194 ~~~~~~~~~~~~~~ 207 (211)
.+.|.+|+.||+.|
T Consensus 47 ~~~~~~C~~C~~~f 60 (115)
T 2dmi_A 47 DDNHETDNNNPKRW 60 (115)
T ss_dssp CSCCCCCCCCCSCC
T ss_pred cCCCccCCCCCccc
Confidence 45577899999988
No 266
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=23.89 E-value=19 Score=23.98 Aligned_cols=13 Identities=23% Similarity=0.766 Sum_probs=10.3
Q ss_pred ccceeeccccccc
Q psy17692 197 FVKCQVCGKVYKA 209 (211)
Q Consensus 197 ~~~~~~~~~~~~~ 209 (211)
-.+|.+||+.|..
T Consensus 75 ~~~C~~C~~~f~~ 87 (100)
T 2ebt_A 75 PFQCGVCNRSFSR 87 (100)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CeECCCCcCccCC
Confidence 3579999999863
No 267
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.78 E-value=17 Score=23.42 Aligned_cols=11 Identities=27% Similarity=0.933 Sum_probs=8.1
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.+|++|+|.|.
T Consensus 16 ~~C~~C~~~f~ 26 (86)
T 1x6h_A 16 YACSHCDKTFR 26 (86)
T ss_dssp EECSSSSCEES
T ss_pred CcCCCCCCccC
Confidence 36888888775
No 268
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.84 E-value=18 Score=20.84 Aligned_cols=11 Identities=27% Similarity=0.613 Sum_probs=9.1
Q ss_pred ceee--ccccccc
Q psy17692 199 KCQV--CGKVYKA 209 (211)
Q Consensus 199 ~~~~--~~~~~~~ 209 (211)
+|.. |||.|..
T Consensus 11 ~C~~~~C~k~F~~ 23 (38)
T 2eln_A 11 KCPTDGCDYSTPD 23 (38)
T ss_dssp ECSSSSCCCEESC
T ss_pred CCCCCCCCCccCC
Confidence 8986 9999864
No 269
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=22.84 E-value=20 Score=20.04 Aligned_cols=8 Identities=50% Similarity=1.435 Sum_probs=7.0
Q ss_pred ceeecccc
Q psy17692 199 KCQVCGKV 206 (211)
Q Consensus 199 ~~~~~~~~ 206 (211)
+|+.|||.
T Consensus 5 ~C~~C~k~ 12 (31)
T 1zfo_A 5 NCARCGKI 12 (31)
T ss_dssp BCSSSCSB
T ss_pred cCCccCCE
Confidence 89999984
No 270
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.54 E-value=19 Score=19.41 Aligned_cols=12 Identities=25% Similarity=0.797 Sum_probs=9.3
Q ss_pred ccee--eccccccc
Q psy17692 198 VKCQ--VCGKVYKA 209 (211)
Q Consensus 198 ~~~~--~~~~~~~~ 209 (211)
.+|. .|||.|..
T Consensus 7 ~~C~~~~C~k~f~~ 20 (38)
T 1bhi_A 7 FLCTAPGCGQRFTN 20 (38)
T ss_dssp EECCCTTTCCEESS
T ss_pred eECCCCCCCcccCC
Confidence 4799 59999864
No 271
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=22.42 E-value=17 Score=23.11 Aligned_cols=12 Identities=58% Similarity=1.154 Sum_probs=9.3
Q ss_pred ccceeecccccc
Q psy17692 197 FVKCQVCGKVYK 208 (211)
Q Consensus 197 ~~~~~~~~~~~~ 208 (211)
-.+|.+||+.|.
T Consensus 57 ~~~C~~C~~~f~ 68 (82)
T 2kmk_A 57 PHKCQVCGKAFS 68 (82)
T ss_dssp CEECTTTSCEES
T ss_pred CCcCCCcchhhC
Confidence 357999998885
No 272
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.31 E-value=21 Score=20.61 Aligned_cols=13 Identities=31% Similarity=0.764 Sum_probs=9.6
Q ss_pred ccee--ecccccccc
Q psy17692 198 VKCQ--VCGKVYKAH 210 (211)
Q Consensus 198 ~~~~--~~~~~~~~~ 210 (211)
.+|. .|||.|...
T Consensus 19 ~~C~~~~C~k~F~~~ 33 (47)
T 1ncs_A 19 FECLFPGCTKTFKRR 33 (47)
T ss_dssp EECCCTTCCCEECSS
T ss_pred eECCCCCCCCccCCH
Confidence 3696 699998753
No 273
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.95 E-value=21 Score=23.53 Aligned_cols=12 Identities=42% Similarity=0.816 Sum_probs=9.7
Q ss_pred ccceeecccccc
Q psy17692 197 FVKCQVCGKVYK 208 (211)
Q Consensus 197 ~~~~~~~~~~~~ 208 (211)
-.+|.+|++.|.
T Consensus 65 ~~~C~~C~~~f~ 76 (95)
T 2yt9_A 65 PYICQSCGKGFS 76 (95)
T ss_dssp SBCCSSSCCCBS
T ss_pred ceECCCccchhC
Confidence 357999999885
No 274
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=21.70 E-value=39 Score=28.85 Aligned_cols=29 Identities=21% Similarity=0.432 Sum_probs=19.8
Q ss_pred CCCHHHHHHHHHHHHHHHhccccceeecccccc
Q psy17692 176 PLTQEEIEKLKKSAQAIKIRDFVKCQVCGKVYK 208 (211)
Q Consensus 176 ~L~~~E~~~l~~Sa~~ik~~~~~~~~~~~~~~~ 208 (211)
.|.++|.+.+-+- ...-=|.|+.||+.|.
T Consensus 248 slg~~El~~mi~e----~g~iev~C~FC~~~Y~ 276 (291)
T 1vzy_A 248 GLGKKEIQDMIEE----DGQAEAVCHFCNEKYL 276 (291)
T ss_dssp TTCHHHHHHHHHH----HSEEEEECTTTCCEEE
T ss_pred hCCHHHHHHHHHc----CCCEEEEeeCCCCEEE
Confidence 3777777665431 2234689999999996
No 275
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=21.39 E-value=20 Score=24.98 Aligned_cols=11 Identities=55% Similarity=1.241 Sum_probs=7.5
Q ss_pred ceeeccccccc
Q psy17692 199 KCQVCGKVYKA 209 (211)
Q Consensus 199 ~~~~~~~~~~~ 209 (211)
.|..||.+||.
T Consensus 58 RC~eCG~~fkL 68 (80)
T 2odx_A 58 RCWECGSVYKL 68 (80)
T ss_dssp ECSSSCCEEEE
T ss_pred ECCCCCeEEEE
Confidence 57777777763
No 276
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=21.01 E-value=19 Score=25.54 Aligned_cols=11 Identities=45% Similarity=1.162 Sum_probs=8.7
Q ss_pred cceeecccccc
Q psy17692 198 VKCQVCGKVYK 208 (211)
Q Consensus 198 ~~~~~~~~~~~ 208 (211)
.||++||.-|-
T Consensus 52 FkCP~CgEEFy 62 (95)
T 2k5c_A 52 FKCPVCGEEFY 62 (95)
T ss_dssp EECTTTCCEEE
T ss_pred hcCCCccHHHh
Confidence 48999998663
No 277
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, TR membrane; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=20.68 E-value=82 Score=26.61 Aligned_cols=55 Identities=20% Similarity=0.206 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHhhHHhH----Hhhh-----cccceeecCC-ceeEEecCCCCHHHHHHHHHHHHHHHh
Q psy17692 137 PLTQEEIEKLKKSAQAI----KEVF-----LSLPCVMADN-GVTHIVNQPLTQEEIEKLKKSAQAIKI 194 (211)
Q Consensus 137 iLsdeE~~iL~~Sa~~l----~~~~-----~svP~vlg~~-Gv~~ii~l~L~~~E~~~l~~Sa~~ik~ 194 (211)
.|+++.|+++..++... .... ..+..+..+. |++-+ .++++|+++|++.++-+.+
T Consensus 236 ~L~~e~q~~i~~aa~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~v~---~~~~~~~~~~~~a~~~v~~ 300 (326)
T 3fxb_A 236 GLSAEDQQLVQNAALAAYDHTVVYQQQAADTELAKIMEAKPEMQVT---VLTDEQRSCFKEAAAEVEA 300 (326)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCTTCEEE---ECCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE---ECCHHHHHHHHHHHHHHHH
Confidence 68899899998876221 1111 1334444344 77644 3799999999999887654
No 278
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=20.64 E-value=22 Score=23.06 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=10.2
Q ss_pred ccceeeccccccc
Q psy17692 197 FVKCQVCGKVYKA 209 (211)
Q Consensus 197 ~~~~~~~~~~~~~ 209 (211)
-.+|..||+.|..
T Consensus 65 ~~~C~~C~~~f~~ 77 (89)
T 2wbs_A 65 PFQCQKCDRAFSR 77 (89)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCCCcccCC
Confidence 3579999999863
No 279
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=20.56 E-value=22 Score=24.24 Aligned_cols=12 Identities=33% Similarity=0.822 Sum_probs=8.7
Q ss_pred ccceeeccccccc
Q psy17692 197 FVKCQVCGKVYKA 209 (211)
Q Consensus 197 ~~~~~~~~~~~~~ 209 (211)
..+|+ ||++.+.
T Consensus 21 T~~C~-CG~~~~~ 32 (71)
T 1gh9_A 21 TRKCV-CGRTVNV 32 (71)
T ss_dssp EEEET-TTEEEEC
T ss_pred EEECC-CCCeeee
Confidence 35798 9998653
No 280
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.30 E-value=22 Score=23.44 Aligned_cols=13 Identities=31% Similarity=0.646 Sum_probs=9.9
Q ss_pred ccceeeccccccc
Q psy17692 197 FVKCQVCGKVYKA 209 (211)
Q Consensus 197 ~~~~~~~~~~~~~ 209 (211)
-.+|.+|++.|..
T Consensus 64 ~~~C~~C~~~f~~ 76 (96)
T 2dmd_A 64 PFKCQICPYASRN 76 (96)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCCCCccCC
Confidence 3579999998853
No 281
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=20.06 E-value=21 Score=23.23 Aligned_cols=12 Identities=25% Similarity=1.065 Sum_probs=9.4
Q ss_pred cceeeccccccc
Q psy17692 198 VKCQVCGKVYKA 209 (211)
Q Consensus 198 ~~~~~~~~~~~~ 209 (211)
.+|.+||+.|..
T Consensus 63 ~~C~~C~~~f~~ 74 (90)
T 1a1h_A 63 FACDICGRKFAR 74 (90)
T ss_dssp EECTTTCCEESS
T ss_pred ccCCCCCchhCC
Confidence 479999998853
Done!