BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy17706
MFEHKGSLQHFRDTSSKPPSETKEPPERSKEPTDRLTEETNPITPELTPGFVSFDRGSKL
LRVRCVDGKSILCSQITVAGKKKMTAVDFKNGYLGKVKNESDKRYKGMSTCPHSLTTPSG
IGPCSHDGMTLCQTTDRFHSTNQIRNVYELDPQE

High Scoring Gene Products

Symbol, full name Information P value
Mtfmt
mitochondrial methionyl-tRNA formyltransferase
protein from Mus musculus 0.00011
CG1750 protein from Drosophila melanogaster 0.00049

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17706
        (154 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

MGI|MGI:1916856 - symbol:Mtfmt "mitochondrial methionyl-t...   101  0.00011   1
FB|FBgn0039836 - symbol:CG1750 species:7227 "Drosophila m...    97  0.00049   1


>MGI|MGI:1916856 [details] [associations]
            symbol:Mtfmt "mitochondrial methionyl-tRNA
            formyltransferase" species:10090 "Mus musculus" [GO:0004479
            "methionyl-tRNA formyltransferase activity" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0008168 "methyltransferase activity"
            evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0016740 "transferase activity" evidence=IEA] [GO:0016742
            "hydroxymethyl-, formyl- and related transferase activity"
            evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0071951
            "conversion of methionyl-tRNA to N-formyl-methionyl-tRNA"
            evidence=IEA] InterPro:IPR002376 InterPro:IPR005793
            InterPro:IPR005794 Pfam:PF00551 Pfam:PF02911 MGI:MGI:1916856
            GO:GO:0005739 GO:GO:0006413 GO:GO:0008168 Gene3D:3.40.50.170
            SUPFAM:SSF53328 eggNOG:COG0223 HOGENOM:HOG000261177 KO:K00604
            GO:GO:0004479 InterPro:IPR015518 PANTHER:PTHR11138
            TIGRFAMs:TIGR00460 CTD:123263 GeneTree:ENSGT00390000017828
            HOVERGEN:HBG031552 OMA:THAPKIS OrthoDB:EOG45TCN8 EMBL:AK009430
            EMBL:AC114645 EMBL:BC019509 IPI:IPI00318057 RefSeq:NP_081410.2
            UniGene:Mm.287956 ProteinModelPortal:Q9D799 SMR:Q9D799
            STRING:Q9D799 PhosphoSite:Q9D799 PRIDE:Q9D799
            Ensembl:ENSMUST00000074792 GeneID:69606 KEGG:mmu:69606
            InParanoid:Q9D799 NextBio:329900 Bgee:Q9D799 CleanEx:MM_MTFMT
            Genevestigator:Q9D799 GermOnline:ENSMUSG00000059183 Uniprot:Q9D799
        Length = 386

 Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query:    47 LTPGFVSFDRGSKLLRVRCVDGKSILCSQITVAGKKKMTAVDFKNGYL 94
             +TPGFV + R S++L VRC DG   + S   V  KK +TA DF NGYL
Sbjct:   301 VTPGFVVYHRPSQMLLVRCKDGWIGVRS---VMLKKTLTATDFYNGYL 345


>FB|FBgn0039836 [details] [associations]
            symbol:CG1750 species:7227 "Drosophila melanogaster"
            [GO:0004479 "methionyl-tRNA formyltransferase activity"
            evidence=ISS] [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0071951 "conversion of methionyl-tRNA to
            N-formyl-methionyl-tRNA" evidence=IEA] InterPro:IPR002376
            InterPro:IPR005793 InterPro:IPR005794 InterPro:IPR011034
            Pfam:PF00551 Pfam:PF02911 EMBL:AE014297 SUPFAM:SSF50486
            GO:GO:0006413 Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328
            KO:K00604 GO:GO:0004479 InterPro:IPR015518 PANTHER:PTHR11138
            TIGRFAMs:TIGR00460 GeneTree:ENSGT00390000017828 OMA:THAPKIS
            FlyBase:FBgn0039836 UniGene:Dm.4522 HSSP:P23882 GeneID:43699
            KEGG:dme:Dmel_CG1750 GenomeRNAi:43699 NextBio:835316
            RefSeq:NP_651857.2 ProteinModelPortal:Q9V9Z0 SMR:Q9V9Z0
            IntAct:Q9V9Z0 MINT:MINT-1626220 STRING:Q9V9Z0
            EnsemblMetazoa:FBtr0085767 UCSC:CG1750-RA InParanoid:Q9V9Z0
            PhylomeDB:Q9V9Z0 ArrayExpress:Q9V9Z0 Bgee:Q9V9Z0 Uniprot:Q9V9Z0
        Length = 342

 Score = 97 (39.2 bits), Expect = 0.00049, P = 0.00049
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:    35 RLTEETNPITPELTPGFVSFDRGSKLLRVRCVDGKSILCSQITVAGKKKMTAVDFKNGYL 94
             RL E+  P+     PG +S+ R S+ L + C     +   Q+ V G+K M+A DF NG+L
Sbjct:   270 RLPEKRVPVQE---PGAISYLRKSRSLIIGCAQQSQLEVLQLRVEGRKPMSAQDFNNGFL 326

Query:    95 GKVKNES 101
              + ++ S
Sbjct:   327 KQARSLS 333


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      154       134   0.00091  102 3  11 22  0.43    31
                                                     30  0.44    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  133 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.90u 0.11s 14.01t   Elapsed:  00:00:00
  Total cpu time:  13.90u 0.11s 14.01t   Elapsed:  00:00:00
  Start:  Thu Aug 15 16:40:48 2013   End:  Thu Aug 15 16:40:48 2013

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