BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17708
(893 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3Q13|A Chain A, The Structure Of The Ca2+-Binding, Glycosylated F-Spondin
Domain Of F- Spondin, A C2-Domain Variant From
Extracellular Matrix
Length = 258
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 293 MDCCACDEARYKFIFEGLWRNETHPKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASP 352
+DCCAC A+Y+ F G W +THPKD+P+ H+S ++GG+H KN+ W G AS
Sbjct: 13 LDCCACGTAKYRLTFYGNWSEKTHPKDYPRRA--NHWSAIIGGSHSKNYVLWEYGGYASE 70
Query: 353 GLKQLAEWGATRIIDSELRSKSRHFRSLVKATGLWYP----GVNANTSSTFRVDKRRNLI 408
G+KQ+AE G+ ++ E+R +S +++KA W V A S+ F VD+ R+L+
Sbjct: 71 GVKQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQPLNVRAAPSAEFSVDRTRHLM 130
Query: 409 SLVSMLGPSPDWLVGVSGLNLCLPNCTWIEGQVIDLYPYDAGTDNGVSYMSINIPAVPQE 468
S ++M+GPSPDW VG+S +LC C W++ V DL P+DAGTD+GV+Y S N P +PQE
Sbjct: 131 SFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDLIPWDAGTDSGVTYESPNKPTIPQE 190
Query: 469 KIHKITPMYPEDERAPFYDPVSEMMDEISIVDNEEEASRPE-CAVTP 514
KI +T + + ++PFYDP + +++ V E A + E C + P
Sbjct: 191 KIRPLTSL--DHPQSPFYDPEGGSITQVARVVIERIARKGEQCNIVP 235
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 129/200 (64%), Gaps = 8/200 (4%)
Query: 1 MDCCACDEARYKFIFEGLWRNETHPKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASP 60
+DCCAC A+Y+ F G W +THPKD+P+ H+S ++GG+H KN+ W G AS
Sbjct: 13 LDCCACGTAKYRLTFYGNWSEKTHPKDYPRRA--NHWSAIIGGSHSKNYVLWEYGGYASE 70
Query: 61 GLKQLAEWGATRIIDSELRSKSRHFRSLVKATGLWYP----GVNANTSSTFRVDKRRNLI 116
G+KQ+AE G+ ++ E+R +S +++KA W V A S+ F VD+ R+L+
Sbjct: 71 GVKQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQPLNVRAAPSAEFSVDRTRHLM 130
Query: 117 SLVSMLGPSPDWLVGVSGLNLCLPNCTWIEGQIIDLYPYDAGTDNGVSYMSINIPAVPQE 176
S ++M+GPSPDW VG+S +LC C W++ + DL P+DAGTD+GV+Y S N P +PQE
Sbjct: 131 SFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDLIPWDAGTDSGVTYESPNKPTIPQE 190
Query: 177 KIHKITPMYPEDERAPFYDP 196
KI +T + + ++PFYDP
Sbjct: 191 KIRPLTSL--DHPQSPFYDP 208
>pdb|3D34|A Chain A, Structure Of The F-Spondin Domain Of Mindin
pdb|3D34|B Chain B, Structure Of The F-Spondin Domain Of Mindin
Length = 223
Score = 123 bits (309), Expect = 4e-28, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 3 CCACDEARYKFIFEGLWRNETHPKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASPGL 62
C A A+Y F G W PK +P +S ++G H ++S W + Q S GL
Sbjct: 9 CSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNQYVSNGL 68
Query: 63 KQLAEWGATRIIDSELRSKSRHFRSLVKA-TGLWYPGVNANTSSTFRVDKRRNLISLVSM 121
+ AE G + E+ + +S+ + + P TS+ V +R +L+S V
Sbjct: 69 RDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSFVVR 128
Query: 122 LGPSPDWLVGVSGLNLCLPNCTWIEGQIIDLYPYDAGTDNGVSYMSINIPAVPQEKIHKI 181
+ PSPDW VGV L+LC + W E +DLYPYDAGTD+G ++ S N +PQ+ + +I
Sbjct: 129 IVPSPDWFVGVDSLDLCDGD-RWREQAALDLYPYDAGTDSGFTFSSPNFATIPQDTVTEI 187
Query: 182 TPMYPEDERAPFYDPVNNFMYP 203
T P P N+F YP
Sbjct: 188 TSSSPS-------HPANSFYYP 202
Score = 122 bits (307), Expect = 7e-28, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 295 CCACDEARYKFIFEGLWRNETHPKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASPGL 354
C A A+Y F G W PK +P +S ++G H ++S W + Q S GL
Sbjct: 9 CSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNQYVSNGL 68
Query: 355 KQLAEWGATRIIDSELRSKSRHFRSLVKA-TGLWYPGVNANTSSTFRVDKRRNLISLVSM 413
+ AE G + E+ + +S+ + + P TS+ V +R +L+S V
Sbjct: 69 RDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSFVVR 128
Query: 414 LGPSPDWLVGVSGLNLCLPNCTWIEGQVIDLYPYDAGTDNGVSYMSINIPAVPQEKIHKI 473
+ PSPDW VGV L+LC + W E +DLYPYDAGTD+G ++ S N +PQ+ + +I
Sbjct: 129 IVPSPDWFVGVDSLDLCDGD-RWREQAALDLYPYDAGTDSGFTFSSPNFATIPQDTVTEI 187
Query: 474 TPMYPEDERAPFYDPVSEMMDEISIV 499
T P FY P + + I+ V
Sbjct: 188 TSSSPSHPANSFYYPRLKALPPIARV 213
>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
pdb|2ODY|F Chain F, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
Length = 127
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 29/129 (22%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPIINLLDA 763
C LP D G C + RF F G C FSYGGCGGN+NNF T EC C A
Sbjct: 6 CRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKAC-------GA 58
Query: 764 PSSTNNITNVDL--------------GALVR--------MCIPFSYGGCGGNKNNFYTQA 801
P N+ + D G L R C F YGGCGGN NN+ ++
Sbjct: 59 PERVNDFESADFKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEE 118
Query: 802 ECLDFCRPI 810
EC C+ +
Sbjct: 119 ECELVCKNM 127
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 684 KRCKSPRGDCKVDMAEVKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNN 743
K C +P + A+ KT C D+GSC ER+ + G C F YGGCGGN NN
Sbjct: 54 KACGAPERVNDFESADFKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNN 113
Query: 744 FYTQAECLDFCRPI 757
+ ++ EC C+ +
Sbjct: 114 YESEEECELVCKNM 127
>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human
Inter-Alpha-Inhibitor Complex
Length = 147
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 688 SPRGDCKVDMAEVKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQ 747
S G ++ + + +C L G C R+ + C F YGGC GN NNF T+
Sbjct: 10 SGGGQLVTEVTKKEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTE 69
Query: 748 AECLDFCRPI----INLLDAPSSTNNITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAEC 803
ECL CR + + ++ P I A+ C+ F YGGC GN N FY++ EC
Sbjct: 70 KECLQTCRTVAACNLPIVRGPCRA-FIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKEC 128
Query: 804 LDFC 807
++C
Sbjct: 129 REYC 132
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFCRPI 810
C F YGGC GN NNF T+ ECL CR +
Sbjct: 51 CETFQYGGCMGNGNNFVTEKECLQTCRTV 79
>pdb|2ZOU|A Chain A, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 2)
pdb|2ZOU|B Chain B, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 2)
Length = 149
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 219 NDQLTEFDDDCTNTISEANTTLKTQVQVMWLAPPTGNGCVRIKANVLANNQLY-GDSGKL 277
+++ T+F +C ++E+ +T++QV W+APP G GCV +KA+++ +Y D G L
Sbjct: 81 DEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQDEGSL 140
Query: 278 TREICE 283
T+++CE
Sbjct: 141 TKKLCE 146
>pdb|3COO|A Chain A, The Crystal Structure Of Reelin-N Domain Of F-Spondin
pdb|3COO|B Chain B, The Crystal Structure Of Reelin-N Domain Of F-Spondin
Length = 180
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 219 NDQLTEFDDDCTNTISEANTTLKTQVQVMWLAPPTGNGCVRIKANVLANNQLY-GDSGKL 277
+++ T+F +C ++E+ +T++QV W+APP G GCV +KA+++ +Y D G L
Sbjct: 96 DEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQDEGSL 155
Query: 278 TREICE 283
T+++CE
Sbjct: 156 TKKLCE 161
>pdb|2ZOT|A Chain A, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 1)
pdb|2ZOT|B Chain B, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 1)
pdb|2ZOT|C Chain C, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 1)
pdb|2ZOT|D Chain D, Crystal Struture Of Human F-Spondin Reeler Domain
(Fragment 1)
Length = 172
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 219 NDQLTEFDDDCTNTISEANTTLKTQVQVMWLAPPTGNGCVRIKANVLANNQLY-GDSGKL 277
+++ T+F +C ++E+ +T++QV W+APP G GCV +KA+++ +Y D G L
Sbjct: 92 DEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQDEGSL 151
Query: 278 TREICE 283
T+++CE
Sbjct: 152 TKKLCE 157
>pdb|2DDI|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
pdb|2DDJ|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
Length = 70
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 698 AEVKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 757
AE C+LP G C + R+ + P+ C PF YGGC GN NNF+++ C D C P+
Sbjct: 4 AEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC-PV 62
Query: 758 IN 759
++
Sbjct: 63 VD 64
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 778 LVRMCIPFSYGGCGGNKNNFYTQAECLDFCRPIIN 812
L++ C PF YGGC GN NNF+++ C D C P+++
Sbjct: 31 LLQQCHPFVYGGCEGNGNNFHSRESCEDAC-PVVD 64
>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At
0.95 Angstrom
pdb|1KNT|A Chain A, The 1.6 Angstroms Structure Of The Kunitz-Type Domain From
The Alpha3 Chain Of The Human Type Vi Collagen
pdb|2KNT|A Chain A, The 1.2 Angstrom Structure Of Kunitz Type Domain C5
pdb|1KUN|A Chain A, Solution Structure Of The Human Alpha3-Chain Type Vi
Collagen C-Terminal Kunitz Domain, Nmr, 20 Structures
Length = 58
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 757
C LP+D G+C F ++ ++P C F YGGCGGN+N F +Q EC C P+
Sbjct: 5 CKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPV 58
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 779 VRMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 810
+ C F YGGCGGN+N F +Q EC C P+
Sbjct: 27 TKSCARFWYGGCGGNENKFGSQKECEKVCAPV 58
>pdb|1IRH|A Chain A, The Solution Structure Of The Third Kunitz Domain Of
Tissue Factor Pathway Inhibitor
Length = 61
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCR 755
C+ P D G C + RF + + G C PF Y GCGGN+NNF ++ ECL C+
Sbjct: 8 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACK 59
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 777 ALVRMCIPFSYGGCGGNKNNFYTQAECLDFCR 808
+++ C PF Y GCGGN+NNF ++ ECL C+
Sbjct: 28 SVIGKCRPFKYSGCGGNENNFTSKQECLRACK 59
>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1AAP|B Chain B, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1TAW|B Chain B, Bovine Trypsin Complexed To Appi
Length = 58
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 700 VKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
V+ C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFC 807
C PF YGGCGGN+NNF T+ C+ C
Sbjct: 30 CAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of
Trypsin
Length = 56
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 700 VKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
V+ C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFC 807
C PF YGGCGGN+NNF T+ C+ C
Sbjct: 30 CAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation
Factor Xi In Complex With Kunitz Protease Inhibitor
Domain Of Protease Nexin Ii
Length = 57
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 703 TCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPII 758
C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C I
Sbjct: 2 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFCRPII 811
C PF YGGCGGN+NNF T+ C+ C I
Sbjct: 28 CAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
Length = 57
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 703 TCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPII 758
C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C I
Sbjct: 2 VCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFCRPII 811
C PF YGGCGGN+NNF T+ C+ C I
Sbjct: 28 CAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
>pdb|1W0R|A Chain A, Solution Structure Of Dimeric Form Of Properdin By X-Ray
Solution Scattering And Analytical Ultracentrifugation
pdb|1W0R|B Chain B, Solution Structure Of Dimeric Form Of Properdin By X-Ray
Solution Scattering And Analytical Ultracentrifugation
pdb|1W0S|A Chain A, Solution Structure Of Trimeric Form Of Properdin By X-Ray
Solution Scattering And Analytical Ultracentrifugation
pdb|1W0S|B Chain B, Solution Structure Of Trimeric Form Of Properdin By X-Ray
Solution Scattering And Analytical Ultracentrifugation
pdb|1W0S|C Chain C, Solution Structure Of Trimeric Form Of Properdin By X-Ray
Solution Scattering And Analytical Ultracentrifugation
Length = 442
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 58/159 (36%), Gaps = 29/159 (18%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVNPASARAAECDRQLVSKEMCIAENPTCPXXXXXXXXX 574
+ PW CS TC KG R R R +PA C Q E C + CP
Sbjct: 115 WGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQQ-VCP--------- 164
Query: 575 XXXXXXXXWEAWSECSVSCGQGLRTRVRRFPDKKTAKKCPHVELVEREPCIESPCTESVV 634
W W+ CS SC G P + ++KC E ++ P PC
Sbjct: 165 -THGAWATWGPWTPCSASCHGGPHE-----PKETRSRKCSAPEPSQKPP--GKPCPGLAY 216
Query: 635 D-------PLCPVT-DWSDW---SPCNASCGYGFKIHTR 662
+ P CPV W W SPC +CG G + R
Sbjct: 217 EQRRCTGLPPCPVAGGWGPWGPVSPCPVTCGLGQTMEQR 255
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 16/144 (11%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVNPASARAAECDRQLVSKEMCIAENPTCPXXXXXXXXX 574
++ W+ CS TC +G ++R R V + + + ++ E+ C
Sbjct: 56 WSTWAPCSVTCSEGSQLRYRRCVGWNGQCSGKVAPGTLEWQLQACEDQQC---------C 106
Query: 575 XXXXXXXXWEAWSECSVSCGQGLRTRVR--RFPDKKTAKKCPHVELVEREPCIESPCTES 632
W W CSV+C +G RTR R P K CP + E E C T+
Sbjct: 107 PEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPG-QAQESEACD----TQQ 161
Query: 633 VVDPLCPVTDWSDWSPCNASCGYG 656
V W W+PC+ASC G
Sbjct: 162 VCPTHGAWATWGPWTPCSASCHGG 185
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 583 WEAWSECSVSCGQGLRTRVRR---FPDKKTAKKCPHVELVEREPCIESPCTESVVDPLCP 639
W W+ CSV+C +G + R RR + + + K P + + C + C +
Sbjct: 56 WSTWAPCSVTCSEGSQLRYRRCVGWNGQCSGKVAPGTLEWQLQACEDQQCCPEMGG---- 111
Query: 640 VTDWSDWSPCNASCGYGFKIHTR 662
+ W W PC+ +C G + R
Sbjct: 112 WSGWGPWEPCSVTCSKGTRTRRR 134
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 833 WGPWSECSVKCGRGYKMRTREVLVQAQGKGTPCPLVLTKRRMC 875
WGPW CSV C +G + R R A G CP + C
Sbjct: 115 WGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEAC 157
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 820 TNNITNVDCVLGEWGPWSECSVKCGRG----YKMRTREVLVQAQGK---GTPCPLVLTKR 872
T + WGPW+ CS C G + R+R+ + G PCP + ++
Sbjct: 159 TQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQ 218
Query: 873 RMCRGV 878
R C G+
Sbjct: 219 RRCTGL 224
>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
Length = 52
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 703 TCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C
Sbjct: 1 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFC 807
C PF YGGCGGN+NNF T+ C+ C
Sbjct: 27 CAPFFYGGCGGNRNNFDTEEYCMAVC 52
>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi
pdb|1CA0|I Chain I, Bovine Chymotrypsin Complexed To Appi
Length = 54
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 703 TCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C +TG C + R+ F+ +G C PF YGGCGGN+NNF T+ C+ C
Sbjct: 2 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 782 CIPFSYGGCGGNKNNFYTQAECLDFC 807
C PF YGGCGGN+NNF T+ C+ C
Sbjct: 28 CAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
pdb|1ZR0|D Chain D, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
Length = 63
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 757
C+LP D G C + R+ ++ C F YGGC GN NNFYT C D C I
Sbjct: 9 CLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRI 62
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 779 VRMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 810
+ C F YGGC GN NNFYT C D C I
Sbjct: 31 TQSCRQFLYGGCEGNANNFYTWEACDDACWRI 62
>pdb|3BYB|A Chain A, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|B Chain B, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|C Chain C, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3UIR|C Chain C, Crystal Structure Of The Plasmin-Textilinin-1 Complex
pdb|3UIR|D Chain D, Crystal Structure Of The Plasmin-Textilinin-1 Complex
Length = 59
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C LP DTG C F + P + C+ F YGGC GN NNF T+ EC C
Sbjct: 7 CELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 57
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C+ F YGGC GN NNF T+ EC C
Sbjct: 30 KKCLEFIYGGCEGNANNFITKEECESTC 57
>pdb|3D65|I Chain I, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom, In Complex With Trypsin
Length = 57
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C LP DTG C F + P + C+ F YGGC GN NNF T+ EC C
Sbjct: 5 CELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 55
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C+ F YGGC GN NNF T+ EC C
Sbjct: 28 KKCLEFIYGGCEGNANNFITKEECESTC 55
>pdb|2JOT|A Chain A, Nuclear Magnetic Resonance Studies On Huwentoxin-Xi From
The Chinese Bird Spider Ornithoctonus Huwena
Length = 55
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 703 TCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
TC LP D G C + ER+ F C F YGGCGGN N F TQ C+ C
Sbjct: 3 TCRLPSDRGRCKASFERWYFNGR--TCAKFIYGGCGGNGNKFPTQEACMKRC 52
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFC 807
R C F YGGCGGN N F TQ C+ C
Sbjct: 25 RTCAKFIYGGCGGNGNKFPTQEACMKRC 52
>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1
Length = 75
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 757
C+ G C R+ ++P + +C F YGGC GNKNN+ + EC+ CR +
Sbjct: 22 CLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGV 75
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 810
++C F YGGC GNKNN+ + EC+ CR +
Sbjct: 45 QICKSFVYGGCLGNKNNYLREEECILACRGV 75
>pdb|4DTG|K Chain K, Hemostatic Effect Of A Monoclonal Antibody Mab 2021
Blocking The Interaction Between Fxa And Tfpi In A
Rabbit Hemophilia Model
Length = 66
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C L ED G C + R+ + C F YGGC GN NNF T EC + C
Sbjct: 7 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
IT + C F YGGC GN NNF T EC + C
Sbjct: 20 ITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
>pdb|1VEX|A Chain A, F-Spondin Tsr Domain 4
Length = 56
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 510 CAVTPYTPWSNCSATCGKGLRMRSRTYVNPASARAAECDRQLVSKEMCIAENPTCP 565
C ++P++ WS+CS TCGKG+R R R + A +C+ L E C+ P CP
Sbjct: 5 CLLSPWSEWSDCSVTCGKGMRTRQRML--KSLAELGDCNEDLEQAEKCML--PECP 56
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 825 NVDCVLGEWGPWSECSVKCGRGYKMRTREVLVQAQGKGTPCPLVLTKRRMC 875
++ C+L W WS+CSV CG+G MRTR+ ++++ + C L + C
Sbjct: 2 SIPCLLSPWSEWSDCSVTCGKG--MRTRQRMLKSLAELGDCNEDLEQAEKC 50
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 583 WEAWSECSVSCGQGLRTRVRRFPDKKTAKKCPHVELVEREPCIESPC 629
W WS+CSV+CG+G+RTR R C + +L + E C+ C
Sbjct: 10 WSEWSDCSVTCGKGMRTRQRMLKSLAELGDC-NEDLEQAEKCMLPEC 55
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 21/71 (29%)
Query: 638 CPVTDWSDWSPCNASCGYGFKIHTRFLLADKQHEAECLQRVSLNETKRCKSPRGDCKVDM 697
C ++ WS+WS C+ +CG G + R L SL E GDC D+
Sbjct: 5 CLLSPWSEWSDCSVTCGKGMRTRQRML-------------KSLAEL-------GDCNEDL 44
Query: 698 AEVKTTCMLPE 708
+ + CMLPE
Sbjct: 45 EQAE-KCMLPE 54
>pdb|1TFX|C Chain C, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
pdb|1TFX|D Chain D, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
Length = 58
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C L ED G C + R+ + C F YGGC GN NNF T EC + C
Sbjct: 5 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
IT + C F YGGC GN NNF T EC + C
Sbjct: 18 ITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8M|B Chain B, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8M|D Chain D, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG CH+ R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +CL C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1JC6|A Chain A, Solution Structure Of Bungarus Faciatus Ix, A Kunitz-Type
Chymotrypsin Inhibitor
Length = 65
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
T C L +TG C++ F + C F+YGGCGGN NNF T EC C
Sbjct: 5 TFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 779 VRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C F+YGGCGGN NNF T EC C
Sbjct: 29 LHKCQKFNYGGCGGNANNFKTIDECQRTC 57
>pdb|1ADZ|A Chain A, The Solution Structure Of The Second Kunitz Domain Of
Tissue Factor Pathway Inhibitor, Nmr, 30 Structures
Length = 71
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C L ED G C + R+ + C F YGGC GN NNF T EC + C
Sbjct: 14 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
IT + C F YGGC GN NNF T EC + C
Sbjct: 27 ITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64
>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With
Altered Binding Loop Sequence
pdb|1G6X|A Chain A, Ultra High Resolution Structure Of Bovine Pancreatic
Trypsin Inhibitor (Bpti) Mutant With Altered Binding
Loop Sequence
pdb|1K6U|A Chain A, Crystal Structure Of Cyclic Bovine Pancreatic Trypsin
Inhibitor
Length = 58
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P G+C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1DTK|A Chain A, The Nmr Solution Structure Of Dendrotoxin K From The Venom
Of Dendroaspis Polylepis Polylepis
Length = 57
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C LP G C F ++ C+PF Y GCGGN N F T EC C
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 779 VRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C+PF Y GCGGN N F T EC C
Sbjct: 27 AKQCLPFDYSGCGGNANRFKTIEECRRTC 55
>pdb|1CO7|I Chain I, R117h Mutant Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
Length = 99
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 39 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 89
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +C+ C
Sbjct: 63 LCQTFVYGGCRAKRNNFKSAEDCMRTC 89
>pdb|1BUN|B Chain B, Structure Of Beta2-Bungarotoxin: Potassium Channel Binding
By Kunitz Modules And Targeted Phospholipase Action
Length = 61
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYT----QAECLDF 753
C P DT C + F ++P C+ F YGGC GN N+F + + ECL++
Sbjct: 7 CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY 60
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 779 VRMCIPFSYGGCGGNKNNFYT----QAECLDF 806
+ C+ F YGGC GN N+F + + ECL++
Sbjct: 29 AKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY 60
>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +CL C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3R6B|A Chain A, Crystal Structure Of Thrombospondin-1 Tsr Domains 2 And 3
Length = 153
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 583 WEAWSECSVSCGQGLRTRVRRFPDKKTAKKCPHVELVEREPCIESPCTESVVDPLCPVTD 642
W WS CSV+CG G+ TR+R E RE T++ CP+
Sbjct: 17 WSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE-------TKACKKDACPING 69
Query: 643 ----WSDWSPCNASCGYGFKIHTRF 663
WS W C+ +CG G + +R
Sbjct: 70 GWGPWSPWDICSVTCGGGVQKRSRL 94
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVNPA-SARAAECDRQLVSKEMCIAENPTCPXXXXXXXX 573
++PWS+CS TCG G+ R R +P+ C+ + + C + CP
Sbjct: 17 WSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKD--ACP-------- 66
Query: 574 XXXXXXXXXWEAWSECSVSCGQGLRTRVR 602
W W CSV+CG G++ R R
Sbjct: 67 --INGGWGPWSPWDICSVTCGGGVQKRSR 93
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 514 PYTPWSNCSATCGKGLRMRSRTYVNPASARAA-ECDRQLVSKEMCIAENPTCP 565
P++PW CS TCG G++ RSR NP +C + ++C ++ CP
Sbjct: 73 PWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQD--CP 123
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 832 EWGPWSECSVKCGRGYKMRTREVLVQA-QGKGTPCPLVLTKRRMCRGVGC 880
W PWS CSV CG G R R + Q G PC + + C+ C
Sbjct: 16 HWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKDAC 65
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 831 GEWGPWSECSVKCGRGYKMRTREV-LVQAQGKGTPCPLVLTKRRMCRGVGCTEPKTPIVP 889
G W PW CSV CG G + R+R Q G C +T+ ++C C P+ P
Sbjct: 72 GPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDC-----PLEP 126
Query: 890 TRY 892
Y
Sbjct: 127 YTY 129
>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis
Angusticeps, Nmr, 15 Structures
Length = 60
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C P GSC F F+ C+PF + GCGGN N F T EC C
Sbjct: 7 CKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 765 SSTNNITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
S ++ + C+PF + GCGGN N F T EC C
Sbjct: 15 SCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57
>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta-Trypsin And Ten P1 Variants Of Bpti.
pdb|1T7C|B Chain B, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T7C|D Chain D, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +CL C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +C+ C
Sbjct: 18 IIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1Y62|A Chain A, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|B Chain B, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|C Chain C, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|D Chain D, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|E Chain E, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|F Chain F, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|2CA7|A Chain A, Conkunitzin-S1 Is The First Member Of A New Kunitz-Type
Neurotoxin Family- Structural And Functional
Characterization
Length = 60
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C LP D+GS +R + + C+ F Y G GGN+NNF +C C
Sbjct: 7 CDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 762 DAPSSTNNITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
D+ S T + + + C+ F Y G GGN+NNF +C C
Sbjct: 12 DSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57
>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 777 ALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
A +C F YGGC +NNF + +CL C
Sbjct: 25 AKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1LSL|A Chain A, Crystal Structure Of The Thrombospondin-1 Type 1 Repeats
Length = 113
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 583 WEAWSECSVSCGQGLRTRVRRFPDKKTAKKCPHVELVEREPCIESPCTESVVDPLCPVTD 642
W WS CSV+CG G+ TR+R E RE T++ CP+
Sbjct: 8 WSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE-------TKACKKDACPING 60
Query: 643 ----WSDWSPCNASCGYGFKIHTRF 663
WS W C+ +CG G + +R
Sbjct: 61 GWGPWSPWDICSVTCGGGVQKRSRL 85
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVNPA-SARAAECDRQLVSKEMCIAENPTCPXXXXXXXX 573
++PWS+CS TCG G+ R R +P+ C+ + + C + CP
Sbjct: 8 WSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKD--ACP-------- 57
Query: 574 XXXXXXXXXWEAWSECSVSCGQGLRTRVR 602
W W CSV+CG G++ R R
Sbjct: 58 --INGGWGPWSPWDICSVTCGGGVQKRSR 84
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 514 PYTPWSNCSATCGKGLRMRSRTYVNPASARAA-ECDRQLVSKEMCIAEN 561
P++PW CS TCG G++ RSR NP +C + ++C ++
Sbjct: 64 PWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQD 112
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 832 EWGPWSECSVKCGRGYKMRTREVLVQA-QGKGTPCPLVLTKRRMCRGVGC 880
W PWS CSV CG G R R + Q G PC + + C+ C
Sbjct: 7 HWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKDAC 56
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 831 GEWGPWSECSVKCGRGYKMRTR 852
G W PW CSV CG G + R+R
Sbjct: 63 GPWSPWDICSVTCGGGVQKRSR 84
>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8L|D Chain D, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 59
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 6 CLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 56
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 30 LCQTFVYGGCRAKRNNFKSAEDCLRTC 56
>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
pdb|3TGJ|I Chain I, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin
Inhibitor (Bpti)
pdb|1F5R|I Chain I, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1F7Z|I Chain I, Rat Trypsinogen K15a Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|3TGK|I Chain I, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17
Complexed With Bovine Pancreatic Trypsin Inhibitor
(Bpti)
Length = 65
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +C+ C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3BTT|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8N|B Chain B, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8N|D Chain D, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 767 TNNITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
T I A +C F YGGC +NNF + +CL C
Sbjct: 15 TARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti.
pdb|1P2Q|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2Q|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +CL C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8O|B Chain B, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8O|D Chain D, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +CL C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v
Length = 58
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1P2I|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 777 ALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
A +C F YGGC +NNF + +CL C
Sbjct: 25 AKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal
Structure Of The Ternary Complex Formed By Bovine
Trypsinogen, Valine-valine And The Arg15 Analogue Of
Bovine Pancreatic Trypsin Inhibitor
Length = 58
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1YKT|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 770 ITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
I A +C F YGGC +NNF + +C+ C
Sbjct: 18 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2KAI|I Chain I, Refined 2.5 Angstroms X-Ray Crystal Structure Of The
Complex Formed By Porcine Kallikrein A And The Bovine
Pancreatic Trypsin Inhibitor. Crystallization, Patterson
Search, Structure Determination, Refinement, Structure
And Comparison With Its Components And With The Bovine
Trypsin- Pancreatic Trypsin Inhibitor Complex
pdb|2PTC|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2TGP|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|3TPI|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|1MTN|D Chain D, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1MTN|H Chain H, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1CBW|D Chain D, Bovine Chymotrypsin Complexed To Bpti
pdb|1CBW|I Chain I, Bovine Chymotrypsin Complexed To Bpti
pdb|1BTH|P Chain P, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1BTH|Q Chain Q, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|A Chain A, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|B Chain B, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|C Chain C, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|D Chain D, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|E Chain E, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|1BHC|A Chain A, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|B Chain B, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|C Chain C, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|D Chain D, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|E Chain E, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|F Chain F, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|G Chain G, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|H Chain H, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|I Chain I, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|J Chain J, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BZX|I Chain I, The Crystal Structure Of Anionic Salmon Trypsin In Complex
With Bovine Pancreatic Trypsin Inhibitor
pdb|1B0C|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|3BTK|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1D0D|B Chain B, Crystal Structure Of Tick Anticoagulant Protein Complexed
With Bovine Pancreatic Trypsin Inhibitor
pdb|1FY8|I Chain I, Crystal Structure Of The Deltaile16val17 Rat Anionic
Trypsinogen-Bpti Complex
pdb|1EAW|B Chain B, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAW|D Chain D, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|2FTL|I Chain I, Crystal Structure Of Trypsin Complexed With Bpti At 100k
pdb|2IJO|I Chain I, Crystal Structure Of The West Nile Virus Ns2b-Ns3 Protease
Complexed With Bovine Pancreatic Trypsin Inhibitor
pdb|1BPI|A Chain A, The Structure Of Bovine Pancreatic Trypsin Inhibitor At
125k: Definition Of Carboxyl-Terminal Residues
Glycine-57 And Alanine-58
pdb|4PTI|A Chain A, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|6PTI|A Chain A, Structure Of Form Iii Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2TPI|I Chain I, On The Disordered Activation Domain In Trypsinogen.
Chemical Labelling And Low-Temperature Crystallography
pdb|1OA5|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|1OA6|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|2R9P|I Chain I, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|F Chain F, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|G Chain G, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2RA3|I Chain I, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|2RA3|C Chain C, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|3FP6|I Chain I, Anionic Trypsin In Complex With Bovine Pancreatic Trypsin
Inhibitor (Bpti) Determined To The 1.49 A Resolution
Limit
pdb|3FP8|I Chain I, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Determined To The
1.46 A Resolution Limit
pdb|3GYM|I Chain I, Structure Of Prostasin In Complex With Aprotinin
pdb|3GYM|J Chain J, Structure Of Prostasin In Complex With Aprotinin
pdb|3LDI|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3U1J|E Chain E, Aprotinin Bound To Dengue Virus Protease
pdb|4DG4|E Chain E, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|C Chain C, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|F Chain F, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|H Chain H, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
Length = 58
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1FAK|I Chain I, Human Tissue Factor Complexed With Coagulation Factor Viia
Inhibited With A Bpti-Mutant
Length = 55
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P G C + + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|D Chain D, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|F Chain F, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
Length = 58
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C R+ + G+C F YGGC +NNF + +CL C
Sbjct: 5 CLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +CL C
Sbjct: 29 LCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17G)
Length = 58
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic Resonance
Solution Structure Of The Bovine Pancreatic Trypsin
Inhibitor And Comparison With Three Crystal Structures
pdb|5PTI|A Chain A, Structure Of Bovine Pancreatic Trypsin Inhibitor. Results
Of Joint Neutron And X-Ray Refinement Of Crystal Form Ii
pdb|3OTJ|I Chain I, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine
Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT
REFINEMENT
Length = 58
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17D)
Length = 58
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 769 NITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+I A +C F YGGC +NNF + +C+ C
Sbjct: 17 DIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor, 3-58 Bpti
Length = 56
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 3 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 53
>pdb|1DEM|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
pdb|1DEN|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
Length = 60
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 700 VKTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
++ C+L + G C+ F + K C F++ GCGGN N F T EC C
Sbjct: 3 LRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTC 57
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C F++ GCGGN N F T EC C
Sbjct: 30 KQCEGFTWSGCGGNSNRFKTIEECRRTC 57
>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s)
Length = 56
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC NNF + +C+ C
Sbjct: 3 CLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTC 53
>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized)
Length = 58
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NNF + +C C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTC 55
>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a
pdb|1JV9|A Chain A, Nmr Structure Of Bpti Mutant G37a
Length = 58
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YG C +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTC 55
>pdb|1DTX|A Chain A, Crystal Structure Of Alpha-Dendrotoxin From The Green
Mamba Venom And Its Comparison With The Structure Of
Bovine Pancreatic Trypsin Inhibitor
Length = 59
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 701 KTTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
+ C+L + G C+ F + K C F + GCGGN N F T EC C
Sbjct: 4 RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 780 RMCIPFSYGGCGGNKNNFYTQAECLDFC 807
+ C F + GCGGN N F T EC C
Sbjct: 30 KQCERFDWSGCGGNSNRFKTIEECRRTC 57
>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC + NF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTC 55
>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGGC +NN + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTC 55
>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In
Complex With Trypsin
Length = 58
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG + R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 766 STNNITNVDLGALVRMCIPFSYGGCGGNKNNFYTQAECLDFC 807
S I A +C F YGGC +NNF + +C+ C
Sbjct: 14 SKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In
Complex With Trypsin
Length = 58
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F YGG +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide
Bridge. The X-Ray Structure Of The C30a(Slash)c51a
Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6
Angstroms
Length = 58
Score = 36.6 bits (83), Expect = 0.055, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+ F YGGC +NNF + + + C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|4HQF|A Chain A, Crystal Structure Of Plasmodium Falciparum Trap, I4 Form
Length = 281
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 831 GEWGPWSECSVKCGRGYKMRTREVL 855
G W WS CSV CG+G + R RE+L
Sbjct: 220 GVWDEWSPCSVTCGKGTRSRKREIL 244
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 583 WEAWSECSVSCGQGLRTRVRRF 604
W+ WS CSV+CG+G R+R R
Sbjct: 222 WDEWSPCSVTCGKGTRSRKREI 243
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 623 PCIESPCTESVVDPLCPVTDWSDWSPCNASCGYGFKIHTRFLLAD 667
P +++ C E C V W +WSPC+ +CG G + R +L +
Sbjct: 204 PFMKAVCVEVEKTASCGV--WDEWSPCSVTCGKGTRSRKREILHE 246
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVN 538
+ WS CS TCGKG R R R ++
Sbjct: 222 WDEWSPCSVTCGKGTRSRKREILH 245
>pdb|3FP7|J Chain J, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Cleaved At The
Scissile Bond (Lys15-Ala16) Determined To The 1.46 A
Resolution Limit
Length = 43
Score = 36.6 bits (83), Expect = 0.062, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 719 RFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
R+ + G+C F YGGC +NNF + +C+ C
Sbjct: 5 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 40
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F YGGC +NNF + +C+ C
Sbjct: 14 LCQTFVYGGCRAKRNNFKSAEDCMRTC 40
>pdb|1BRB|I Chain I, Crystal Structures Of Rat Anionic Trypsin Complexed With
The Protein Inhibitors Appi And Bpti
Length = 58
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 707 PEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECL 751
P TG C + R+ + G+C F YGGC +NNF + +C+
Sbjct: 8 PPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCM 52
>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti
Variant (Tyr35- >gly)
pdb|8PTI|A Chain A, Crystal Structure Of A Y35g Mutant Of Bovine Pancreatic
Trypsin Inhibitor
Length = 58
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+C F GGC +NNF + +C+ C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTC 55
>pdb|3M7Q|B Chain B, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Pancreatic Trypsin
Length = 61
Score = 36.2 bits (82), Expect = 0.092, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCRPI 757
+ C P+ G C + RF F+ G C PF YGGCGGN NNF T +C CR +
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRAL 60
>pdb|3OFW|A Chain A, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Carribean Sea Anemone
Stichodactyla Helianthus
Length = 60
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCR 755
+ C P+ G C + RF F+ G C PF YGGCGGN NNF T +C CR
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 58
>pdb|3T5O|A Chain A, Crystal Structure Of Human Complement Component C6
pdb|4A5W|B Chain B, Crystal Structure Of C5b6
pdb|4E0S|B Chain B, Crystal Structure Of C5b-6
Length = 913
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 805 DFCRPIINLLDAPSSTNNITNVDCVLGEWGPWSECSVKCGRGYKMRTREVLVQAQGKGTP 864
+FC I + + ++C+LG++GPWS+C + K+R+ VL +Q G P
Sbjct: 38 NFCEQICSKQETRECNWQRCPINCLLGDFGPWSDCDPCIEKQSKVRS--VLRPSQFGGQP 95
Query: 865 C--PLV 868
C PLV
Sbjct: 96 CTAPLV 101
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 637 LCPVTDWSDWSPCNASCGYGFKIHTRFLLADKQHEAE-CLQRVSLNETKRCKSPR 690
C W+ W+ C+ +C G + R ++ DK ++ C Q S ET+ C R
Sbjct: 2 FCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENFCEQICSKQETRECNWQR 56
>pdb|4HQL|A Chain A, Crystal Structure Of Magnesium-Loaded Plasmodium Vivax
Trap Protein
pdb|4HQL|B Chain B, Crystal Structure Of Magnesium-Loaded Plasmodium Vivax
Trap Protein
pdb|4HQN|A Chain A, Crystal Structure Of Manganese-Loaded Plasmodium Vivax
Trap Protein
pdb|4HQN|B Chain B, Crystal Structure Of Manganese-Loaded Plasmodium Vivax
Trap Protein
pdb|4HQO|A Chain A, Crystal Structure Of Plasmodium Vivax Trap Protein
pdb|4HQO|B Chain B, Crystal Structure Of Plasmodium Vivax Trap Protein
Length = 266
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 831 GEWGPWSECSVKCGRGYKMRTREVL 855
G W PW+ CSV CGRG R+R L
Sbjct: 217 GPWDPWTACSVTCGRGTHSRSRPSL 241
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 514 PYTPWSNCSATCGKGLRMRSR 534
P+ PW+ CS TCG+G RSR
Sbjct: 218 PWDPWTACSVTCGRGTHSRSR 238
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 583 WEAWSECSVSCGQGLRTRVR 602
W+ W+ CSV+CG+G +R R
Sbjct: 219 WDPWTACSVTCGRGTHSRSR 238
>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
pdb|1AAL|B Chain B, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
Length = 58
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG C + R+ + G+ F YGGC +NNF + + + C
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|1LD6|A Chain A, Structure Of Bpti_8a Mutant
Length = 58
Score = 34.3 bits (77), Expect = 0.29, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P G+C + R+ + G+C F+YG C +NNF + +CL C
Sbjct: 5 CLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTC 55
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 781 MCIPFSYGGCGGNKNNFYTQAECLDFC 807
+C F+YG C +NNF + +CL C
Sbjct: 29 LCQTFAYGACAAKRNNFKSAEDCLRTC 55
>pdb|3VUO|A Chain A, Crystal Structure Of Nontoxic Nonhemagglutinin
Subcomponent (Ntnha) From Clostridium Botulinum Serotype
D Strain 4947
Length = 1196
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 718 ERFRFEPMKGMCIPFSYGGCGG-NKNNFYTQ-AECLDFCRPIINLLDAPSSTNNITNVDL 775
ER+ EP+ I Y GG +NF +Q +E +F + II LL ++T I+ L
Sbjct: 44 ERYYGEPLD---IAEEYKLDGGIYDSNFLSQDSERENFLQAIITLLKRINNT--ISGKQL 98
Query: 776 GALVRMCIPFSYGGCGG 792
+L+ IPF YG GG
Sbjct: 99 LSLISTAIPFPYGYVGG 115
>pdb|2BBX|A Chain A, Nmr Solution Structure Of The Tsr Domain Of Malaria Trap
Protein
Length = 49
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 831 GEWGPWSECSVKCGRGYKMRTREVL-------VQAQGKGTPCP 866
G W WS CSV CG+G + R RE+L +Q Q + CP
Sbjct: 6 GVWDEWSPCSVTCGKGTRSRKREILHEGCTSEIQEQCEEERCP 48
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 583 WEAWSECSVSCGQGLRTRVRRF 604
W+ WS CSV+CG+G R+R R
Sbjct: 8 WDEWSPCSVTCGKGTRSRKREI 29
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 643 WSDWSPCNASCGYGFKIHTRFLLAD 667
W +WSPC+ +CG G + R +L +
Sbjct: 8 WDEWSPCSVTCGKGTRSRKREILHE 32
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 515 YTPWSNCSATCGKGLRMRSRTYVN 538
+ WS CS TCGKG R R R ++
Sbjct: 8 WDEWSPCSVTCGKGTRSRKREILH 31
>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser,
Cys38->ser) In Complex With Trypsin
Length = 58
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG + R+ + G+C F YGG +NNF + +C+ C
Sbjct: 5 CLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|1SZL|A Chain A, F-Spondin Tsr Domain 1
Length = 61
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 828 CVLGEWGPWSECSVK-CGRGYKMRTREVLVQAQGKGTPCPLVLTKRRMCRGVGCTE 882
C+ W PWS CS C +G +MR R + Q PCP + C G GC++
Sbjct: 5 CIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLD-LSVPCPDT-QDFQPCMGPGCSD 58
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 510 CAVTPYTPWSNCSA-TCGKGLRMRSR 534
C + ++PWS CS+ TC KG RMR R
Sbjct: 5 CIYSNWSPWSACSSSTCEKGKRMRQR 30
>pdb|1SHP|A Chain A, The Nmr Solution Structure Of A Kunitz-Type Proteinase
Inhibitor From The Sea Anemone Stichodactyla Helianthus
Length = 55
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCR 755
+ C P+ G C + RF F+ G C PF YGGCGGN NNF T +C CR
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54
>pdb|3T62|D Chain D, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|E Chain E, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|F Chain F, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
Length = 54
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCR 755
+ C P+ G C + RF F+ G C PF YGGCGGN NNF T +C CR
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54
>pdb|3UOU|B Chain B, Crystal Structure Of The Kunitz-Type Protease Inhibitor
Shpi-1 Lys13leu Mutant In Complex With Pancreatic
Elastase
Length = 55
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 702 TTCMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFCR 755
+ C P+ G C + RF F+ G C PF YGGCGGN NNF T +C CR
Sbjct: 1 SICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54
>pdb|1YLC|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 707 PEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNF 744
P TG C + R+ + G+ F YGGC +NNF
Sbjct: 8 PPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNF 45
>pdb|2POD|A Chain A, Crystal Structure Of A Member Of Enolase Superfamily From
Burkholderia Pseudomallei K96243
pdb|2POD|B Chain B, Crystal Structure Of A Member Of Enolase Superfamily From
Burkholderia Pseudomallei K96243
Length = 410
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 25 PKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASPGLKQLAEWGATRIIDSELRSKSRH 84
P++FP LW+ +D G G +F+G A + EW A R+I + RH
Sbjct: 13 PEEFPNLLWVLVHTD--EGITGLGETFYG----ACSAEAYIHEWAANRLIGEDPLQIDRH 66
Query: 85 FRSLVKATGLWYPGVNANTSSTFRV 109
+ L G G +S +
Sbjct: 67 AKRLSGYLGFRSAGAEXRGNSALDI 91
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 317 PKDFPKSLWLTHFSDVVGGTHGKNFSFWGEGQIASPGLKQLAEWGATRIIDSELRSKSRH 376
P++FP LW+ +D G G +F+G A + EW A R+I + RH
Sbjct: 13 PEEFPNLLWVLVHTD--EGITGLGETFYG----ACSAEAYIHEWAANRLIGEDPLQIDRH 66
Query: 377 FRSLVKATGLWYPGVNANTSSTFRV 401
+ L G G +S +
Sbjct: 67 AKRLSGYLGFRSAGAEXRGNSALDI 91
>pdb|3VDJ|A Chain A, Crystal Structure Of Circumsporozoite Protein Atsr Domain,
R32 Native Form
pdb|3VDK|A Chain A, Crystal Structure Of Circumsporozoite Protein Atsr Domain,
R32 Platinum-Bound Form
pdb|3VDL|A Chain A, Crystal Structure Of Circumsporozoite Protein Atsr Domain,
P43212 Form
pdb|3VDL|B Chain B, Crystal Structure Of Circumsporozoite Protein Atsr Domain,
P43212 Form
pdb|3VDL|C Chain C, Crystal Structure Of Circumsporozoite Protein Atsr Domain,
P43212 Form
Length = 77
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 586 WSECSVSCGQGLRTRVRRFPDKKTAKKCPHVELVEREPCIESPC 629
WS CSV+CG G++ R++ K + + +E++ C C
Sbjct: 26 WSPCSVTCGNGIQVRIKPGSANKPKDELDYANDIEKKICKMEKC 69
>pdb|2ZJX|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
pdb|2ZJX|B Chain B, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
Length = 58
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG + R+ + G+ F YGG +NNF + + L C
Sbjct: 5 CLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTC 55
>pdb|2ZVX|A Chain A, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
pdb|2ZVX|B Chain B, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
Length = 58
Score = 30.4 bits (67), Expect = 4.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 704 CMLPEDTGSCHSFNERFRFEPMKGMCIPFSYGGCGGNKNNFYTQAECLDFC 754
C+ P TG + R+ + G+ F YGG +NNF + + L C
Sbjct: 5 CLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGVRAKRNNFKSAEDALRTC 55
>pdb|3VN4|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of
Human Adamts13 (P475s Mutant)
Length = 410
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 583 WEAW---SECSVSCGQGLRTRVRRFPDKKTA---KKCPHVELVEREPCIESPCTESVVDP 636
W +W S CS SCG G+ TR R+ + + A + C +L + E C C ++ ++
Sbjct: 103 WSSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGGRACVGADL-QAEMCNTQACEKTQLEF 161
Query: 637 LCPVTDWSDWSPCNASCGYGFKIHTRFLLADKQHEAEC 674
+ +D P +S G H ++ Q +A C
Sbjct: 162 MSQQCARTDGQPLRSSPGGASFYHWGAAVSHSQGDALC 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,781,651
Number of Sequences: 62578
Number of extensions: 1250009
Number of successful extensions: 2618
Number of sequences better than 100.0: 99
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2348
Number of HSP's gapped (non-prelim): 238
length of query: 893
length of database: 14,973,337
effective HSP length: 108
effective length of query: 785
effective length of database: 8,214,913
effective search space: 6448706705
effective search space used: 6448706705
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)