Query psy17710
Match_columns 75
No_of_seqs 65 out of 67
Neff 4.4
Searched_HMMs 13730
Date Fri Aug 16 21:03:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17710.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17710hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c60a1 d.15.2.2 (A:43-122) Mi 39.6 3.9 0.00028 24.0 0.6 11 64-74 52-62 (80)
2 d2nptb1 d.15.2.2 (B:42-123) Mi 38.0 4.3 0.00031 23.9 0.6 10 65-74 53-62 (82)
3 d2i53a1 a.74.1.1 (A:14-157) Cy 25.5 19 0.0014 21.0 2.1 27 21-47 23-49 (144)
4 d2ivxa1 a.74.1.1 (A:7-149) Cyc 21.2 26 0.0019 20.1 2.1 26 21-46 17-42 (143)
5 d1elka_ a.118.9.2 (A:) Tom1 pr 16.5 39 0.0029 20.3 2.2 20 32-51 111-130 (153)
6 d1mhqa_ a.118.9.2 (A:) ADP-rib 16.5 38 0.0027 20.2 2.1 21 31-51 100-120 (143)
7 d1ujka_ a.118.9.2 (A:) ADP-rib 14.5 1.1E+02 0.0083 17.9 4.1 20 30-49 106-125 (145)
8 d1h0za_ g.68.1.2 (A:) Serine p 14.4 8.9 0.00065 21.3 -1.3 25 11-35 43-67 (68)
9 d1juqa_ a.118.9.2 (A:) ADP-rib 13.8 1.2E+02 0.0086 17.9 4.0 19 31-49 101-119 (151)
10 d1f45b_ a.26.1.1 (B:) Heterodi 13.8 41 0.003 21.9 1.8 17 3-19 145-161 (178)
No 1
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.59 E-value=3.9 Score=23.95 Aligned_cols=11 Identities=36% Similarity=0.262 Sum_probs=8.6
Q ss_pred hhhhhhhhhhh
Q psy17710 64 VSISRDLLKFI 74 (75)
Q Consensus 64 ~rlqrDLD~a~ 74 (75)
-+=|.|||+||
T Consensus 52 l~~Q~DLDkAv 62 (80)
T d2c60a1 52 LKNQDDLDKAI 62 (80)
T ss_dssp CCSHHHHHHHH
T ss_pred cccHHHHHHHH
Confidence 34578999997
No 2
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.01 E-value=4.3 Score=23.87 Aligned_cols=10 Identities=30% Similarity=0.318 Sum_probs=8.1
Q ss_pred hhhhhhhhhh
Q psy17710 65 SISRDLLKFI 74 (75)
Q Consensus 65 rlqrDLD~a~ 74 (75)
+=|.|||+||
T Consensus 53 ~~Q~DLDkAv 62 (82)
T d2nptb1 53 TTQDDLDKAV 62 (82)
T ss_dssp CCHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 4478999997
No 3
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.47 E-value=19 Score=20.97 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=20.9
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHhc
Q psy17710 21 RRRDDLAFRREMSFRNKLVDYLMDWVL 47 (75)
Q Consensus 21 ~rkd~l~~r~e~~~RNkLle~i~eW~~ 47 (75)
.+++.++...|.+.|.++.++|.+=..
T Consensus 23 s~~~~i~~~~E~~~R~~~~~~i~~~~~ 49 (144)
T d2i53a1 23 SQLEGLDPATEARYRREGARFIFDVGT 49 (144)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHH
Confidence 466788999999999988877765433
No 4
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.17 E-value=26 Score=20.11 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=20.2
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHh
Q psy17710 21 RRRDDLAFRREMSFRNKLVDYLMDWV 46 (75)
Q Consensus 21 ~rkd~l~~r~e~~~RNkLle~i~eW~ 46 (75)
.++|.++...|.+.|....++|.+=-
T Consensus 17 S~~~gi~~~~E~~~R~~~~~~i~~~~ 42 (143)
T d2ivxa1 17 SRRCGVEADKELSCRQQAANLIQEMG 42 (143)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999988877666543
No 5
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.48 E-value=39 Score=20.29 Aligned_cols=20 Identities=10% Similarity=0.336 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHhcCcCC
Q psy17710 32 MSFRNKLVDYLMDWVLGSAN 51 (75)
Q Consensus 32 ~~~RNkLle~i~eW~~~~s~ 51 (75)
..+|.++++.|.+|...+..
T Consensus 111 ~~Vk~kil~li~~W~~~f~~ 130 (153)
T d1elka_ 111 TIVHDKVLNLIQSWADAFRS 130 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45899999999999876543
No 6
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.46 E-value=38 Score=20.15 Aligned_cols=21 Identities=10% Similarity=0.411 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHhcCcCC
Q psy17710 31 EMSFRNKLVDYLMDWVLGSAN 51 (75)
Q Consensus 31 e~~~RNkLle~i~eW~~~~s~ 51 (75)
...+|+++++.|.+|...+..
T Consensus 100 ~~~Vk~kil~li~~Wa~~f~~ 120 (143)
T d1mhqa_ 100 TGKVKGRVIEILFSWTVWFPE 120 (143)
T ss_dssp CHHHHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHHHHcCC
Confidence 557899999999999886643
No 7
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.46 E-value=1.1e+02 Score=17.87 Aligned_cols=20 Identities=25% Similarity=0.667 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHhcCc
Q psy17710 30 REMSFRNKLVDYLMDWVLGS 49 (75)
Q Consensus 30 ~e~~~RNkLle~i~eW~~~~ 49 (75)
-...+++++++.|.+|...+
T Consensus 106 ~~~~Vk~kil~li~~W~~~f 125 (145)
T d1ujka_ 106 TSEKVKNKILELLYSWTVGL 125 (145)
T ss_dssp SCHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHHHHC
Confidence 34578999999999998755
No 8
>d1h0za_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.43 E-value=8.9 Score=21.35 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcccccchhhhHHHHH
Q psy17710 11 KLCNLIEAMMRRRDDLAFRREMSFR 35 (75)
Q Consensus 11 k~CqL~e~vm~rkd~l~~r~e~~~R 35 (75)
.-|.||.+.+++...+..+++.+=|
T Consensus 43 N~C~~c~~~~~~~~~i~~~~~Gecr 67 (68)
T d1h0za_ 43 NTCSMCEVFFQAEEEEKKKKEGESR 67 (68)
T ss_dssp SHHHHHHHHHHHHHHHTTSCSSCTT
T ss_pred CHhHHHHHHHHhhhHHHHhhccccC
Confidence 3589999999998888877765533
No 9
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.77 E-value=1.2e+02 Score=17.91 Aligned_cols=19 Identities=16% Similarity=0.564 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHhcCc
Q psy17710 31 EMSFRNKLVDYLMDWVLGS 49 (75)
Q Consensus 31 e~~~RNkLle~i~eW~~~~ 49 (75)
...+++++|+.|.+|...+
T Consensus 101 ~~~Vk~kil~ll~~Wa~~f 119 (151)
T d1juqa_ 101 SEKVKTKVIELLYSWTMAL 119 (151)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHc
Confidence 3579999999999998765
No 10
>d1f45b_ a.26.1.1 (B:) Heterodimeric interleukin-12 alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.77 E-value=41 Score=21.86 Aligned_cols=17 Identities=35% Similarity=0.489 Sum_probs=12.1
Q ss_pred chhhHHHHHHHHHHHHH
Q psy17710 3 VHAVHIKTKLCNLIEAM 19 (75)
Q Consensus 3 ~~slRiKik~CqL~e~v 19 (75)
+.+++.|+|+|.|.-+.
T Consensus 145 ~d~yk~r~kLCilLhaF 161 (178)
T d1f45b_ 145 PDFYKTKIKLCILLHAF 161 (178)
T ss_dssp ---CHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhh
Confidence 46789999999998763
Done!