Query psy17720
Match_columns 80
No_of_seqs 105 out of 191
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 21:17:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xdz_A Methyltransferase GIDB; 90.7 0.61 2.1E-05 31.5 5.6 53 2-56 162-216 (240)
2 2wa2_A Non-structural protein 87.8 0.63 2.2E-05 33.5 4.2 49 2-54 179-232 (276)
3 3e23_A Uncharacterized protein 83.2 0.94 3.2E-05 29.4 3.0 55 2-56 129-198 (211)
4 3evz_A Methyltransferase; NYSG 83.1 3 0.0001 27.3 5.5 42 2-45 167-208 (230)
5 2gjf_A Designed protein; proca 82.3 1.4 4.8E-05 25.9 3.2 25 6-30 6-30 (78)
6 3g89_A Ribosomal RNA small sub 78.1 3.4 0.00012 28.6 4.6 53 2-56 172-226 (249)
7 2p41_A Type II methyltransfera 77.5 5 0.00017 29.1 5.5 48 2-53 179-229 (305)
8 3lcc_A Putative methyl chlorid 77.1 1.8 6.1E-05 28.6 2.8 46 2-47 159-212 (235)
9 3sgz_A Hydroxyacid oxidase 2; 69.9 6.7 0.00023 30.0 4.8 40 7-46 121-162 (352)
10 3dou_A Ribosomal RNA large sub 67.3 9.9 0.00034 25.1 4.7 50 2-55 127-178 (191)
11 3lpm_A Putative methyltransfer 67.1 11 0.00036 25.6 4.9 52 2-56 164-216 (259)
12 2ozv_A Hypothetical protein AT 66.2 7.5 0.00026 26.8 4.1 51 2-56 158-209 (260)
13 2zfu_A Nucleomethylin, cerebra 65.8 1.8 6E-05 28.1 0.7 35 2-36 139-173 (215)
14 3e8s_A Putative SAM dependent 65.7 11 0.00038 23.8 4.5 53 2-54 140-223 (227)
15 3grz_A L11 mtase, ribosomal pr 65.0 4 0.00014 26.3 2.3 32 2-36 147-179 (205)
16 2oxt_A Nucleoside-2'-O-methylt 64.9 6.6 0.00023 27.9 3.7 43 2-47 171-216 (265)
17 3e05_A Precorrin-6Y C5,15-meth 64.2 7.9 0.00027 24.9 3.7 31 2-34 130-160 (204)
18 3cgg_A SAM-dependent methyltra 62.7 10 0.00035 23.3 3.9 35 2-36 135-169 (195)
19 3mti_A RRNA methylase; SAM-dep 62.7 8.3 0.00029 24.2 3.5 44 2-45 123-171 (185)
20 3g2m_A PCZA361.24; SAM-depende 61.3 11 0.00036 25.9 4.1 37 22-58 254-290 (299)
21 2ld4_A Anamorsin; methyltransf 59.3 2.8 9.5E-05 26.5 0.7 33 2-34 89-128 (176)
22 2nyu_A Putative ribosomal RNA 55.7 10 0.00034 23.9 2.9 16 2-17 133-148 (196)
23 3hem_A Cyclopropane-fatty-acyl 53.1 19 0.00065 24.7 4.3 16 2-17 171-186 (302)
24 1gox_A (S)-2-hydroxy-acid oxid 52.2 20 0.00069 26.7 4.6 38 8-45 123-162 (370)
25 1l3i_A Precorrin-6Y methyltran 52.1 11 0.00038 23.1 2.7 32 2-35 122-153 (192)
26 1kbi_A Cytochrome B2, L-LCR; f 51.3 24 0.00082 27.8 5.0 39 7-45 246-286 (511)
27 3dli_A Methyltransferase; PSI- 51.0 15 0.00052 24.1 3.4 35 2-36 128-178 (240)
28 3h2b_A SAM-dependent methyltra 49.5 39 0.0013 21.3 5.0 43 2-44 129-184 (203)
29 1jsx_A Glucose-inhibited divis 49.3 12 0.0004 23.9 2.5 40 2-46 153-194 (207)
30 4dzr_A Protein-(glutamine-N5) 48.8 27 0.00092 21.8 4.1 40 2-44 152-195 (215)
31 1yzh_A TRNA (guanine-N(7)-)-me 48.7 20 0.00069 23.2 3.7 32 2-35 144-175 (214)
32 3bwc_A Spermidine synthase; SA 47.0 12 0.00042 26.6 2.5 35 2-36 198-234 (304)
33 2nli_A Lactate oxidase; flavoe 46.9 33 0.0011 25.7 5.0 39 7-45 132-172 (368)
34 3njr_A Precorrin-6Y methylase; 45.6 22 0.00077 23.4 3.5 31 2-34 142-172 (204)
35 2fca_A TRNA (guanine-N(7)-)-me 45.4 21 0.00072 23.6 3.4 32 2-35 141-172 (213)
36 3dh0_A SAM dependent methyltra 45.3 25 0.00084 22.4 3.6 43 2-44 131-183 (219)
37 3eey_A Putative rRNA methylase 45.0 55 0.0019 20.5 5.4 57 2-58 127-188 (197)
38 3hnr_A Probable methyltransfer 44.7 29 0.00098 22.2 3.9 13 2-14 133-145 (220)
39 2nxc_A L11 mtase, ribosomal pr 44.4 11 0.00039 25.8 2.0 33 2-36 206-238 (254)
40 2frn_A Hypothetical protein PH 43.7 10 0.00035 26.4 1.7 37 2-38 213-253 (278)
41 1p4c_A L(+)-mandelate dehydrog 42.2 45 0.0015 25.0 5.1 41 7-47 123-164 (380)
42 2b78_A Hypothetical protein SM 41.9 31 0.0011 25.4 4.2 45 2-46 319-370 (385)
43 1kpg_A CFA synthase;, cyclopro 41.9 19 0.00064 24.3 2.7 15 2-16 156-170 (287)
44 3mb5_A SAM-dependent methyltra 40.3 15 0.00051 24.3 2.0 37 2-40 182-220 (255)
45 3hp7_A Hemolysin, putative; st 40.1 39 0.0014 24.7 4.4 56 2-57 173-249 (291)
46 1ej0_A FTSJ; methyltransferase 40.0 57 0.0019 19.2 4.6 44 2-49 124-167 (180)
47 3i9f_A Putative type 11 methyl 39.3 58 0.002 19.8 4.5 15 2-16 100-114 (170)
48 4e2x_A TCAB9; kijanose, tetron 39.0 19 0.00067 26.0 2.6 47 2-48 196-259 (416)
49 1ofu_X SULA, hypothetical prot 39.0 53 0.0018 21.1 4.5 32 10-41 59-90 (119)
50 2fk8_A Methoxy mycolic acid sy 38.8 32 0.0011 23.7 3.6 15 2-16 182-196 (318)
51 3mq2_A 16S rRNA methyltransfer 38.7 18 0.00062 23.3 2.2 36 2-37 128-179 (218)
52 3g5l_A Putative S-adenosylmeth 38.4 32 0.0011 22.6 3.4 21 22-42 196-216 (253)
53 3pfg_A N-methyltransferase; N, 38.2 30 0.001 23.0 3.2 30 22-54 217-246 (263)
54 3id6_C Fibrillarin-like rRNA/T 38.2 11 0.00038 26.6 1.1 43 3-45 170-220 (232)
55 1vjq_A Designed protein; struc 37.9 28 0.00096 20.0 2.8 21 10-30 2-22 (79)
56 2b3t_A Protein methyltransfera 37.8 15 0.00051 25.1 1.7 40 2-44 226-266 (276)
57 2a14_A Indolethylamine N-methy 37.6 55 0.0019 22.1 4.6 42 2-43 185-239 (263)
58 2qm3_A Predicted methyltransfe 37.2 52 0.0018 23.8 4.7 35 2-36 265-303 (373)
59 2pwy_A TRNA (adenine-N(1)-)-me 36.9 17 0.0006 23.8 1.9 33 2-36 186-218 (258)
60 2g72_A Phenylethanolamine N-me 36.5 43 0.0015 22.7 3.9 42 2-43 203-257 (289)
61 1vlm_A SAM-dependent methyltra 36.1 17 0.00058 23.6 1.7 35 2-36 127-182 (219)
62 2nzl_A Hydroxyacid oxidase 1; 36.1 62 0.0021 24.5 5.1 39 7-45 146-186 (392)
63 2i62_A Nicotinamide N-methyltr 35.9 66 0.0023 20.9 4.6 42 2-43 186-240 (265)
64 3i33_A Heat shock-related 70 k 35.8 1E+02 0.0035 22.0 6.0 42 18-59 170-223 (404)
65 4gni_A Putative heat shock pro 35.6 29 0.00098 25.1 3.0 50 9-59 152-214 (409)
66 1o54_A SAM-dependent O-methylt 35.1 24 0.00081 24.0 2.4 33 2-36 201-233 (277)
67 3hm2_A Precorrin-6Y C5,15-meth 32.3 61 0.0021 19.7 3.8 31 2-34 115-145 (178)
68 3dlm_A Histone-lysine N-methyl 32.3 52 0.0018 24.1 4.0 43 4-59 69-111 (213)
69 2plw_A Ribosomal RNA methyltra 31.7 77 0.0026 19.8 4.3 16 2-17 142-157 (201)
70 3tsh_A Pollen allergen PHL P 4 31.6 51 0.0018 25.1 4.0 22 12-33 55-76 (500)
71 2xyq_A Putative 2'-O-methyl tr 31.5 34 0.0012 24.9 2.9 33 2-36 159-191 (290)
72 3mgg_A Methyltransferase; NYSG 31.2 23 0.00079 23.6 1.8 13 2-14 130-142 (276)
73 4htf_A S-adenosylmethionine-de 31.1 21 0.00072 24.1 1.6 14 2-15 161-174 (285)
74 3l8d_A Methyltransferase; stru 31.0 22 0.00074 23.0 1.6 35 2-36 141-194 (242)
75 2igt_A SAM dependent methyltra 31.0 86 0.0029 22.7 5.0 45 2-46 260-309 (332)
76 3bzb_A Uncharacterized protein 30.9 24 0.00082 24.5 1.9 38 2-39 188-234 (281)
77 2exr_A Cytokinin dehydrogenase 30.2 47 0.0016 25.8 3.6 22 10-31 62-83 (524)
78 3p2e_A 16S rRNA methylase; met 30.2 27 0.00092 23.6 2.0 11 2-12 127-137 (225)
79 1fbn_A MJ fibrillarin homologu 30.1 41 0.0014 22.1 2.9 40 2-42 166-213 (230)
80 3sm3_A SAM-dependent methyltra 29.9 19 0.00065 23.0 1.1 14 2-15 129-142 (235)
81 3f4k_A Putative methyltransfer 28.8 51 0.0017 21.5 3.1 44 2-45 138-199 (257)
82 3kkz_A Uncharacterized protein 28.2 34 0.0012 22.8 2.2 44 2-45 138-199 (267)
83 2h1t_A Hypothetical protein; s 28.0 14 0.00048 26.3 0.3 10 36-45 175-184 (188)
84 1yb2_A Hypothetical protein TA 28.0 29 0.00098 23.7 1.8 33 2-36 199-231 (275)
85 3opn_A Putative hemolysin; str 27.4 87 0.003 21.3 4.3 56 2-57 125-201 (232)
86 2p7i_A Hypothetical protein; p 27.1 42 0.0014 21.3 2.5 13 2-14 129-141 (250)
87 3ujc_A Phosphoethanolamine N-m 27.0 18 0.00063 23.6 0.7 40 2-41 147-205 (266)
88 1y8c_A S-adenosylmethionine-de 26.2 1.2E+02 0.0041 19.2 4.5 21 22-42 205-226 (246)
89 2bvf_A 6-hydroxy-D-nicotine ox 25.5 67 0.0023 24.2 3.6 26 7-32 36-61 (459)
90 1sa3_A Type II restriction enz 24.7 39 0.0013 25.7 2.2 25 29-53 236-260 (262)
91 3hwu_A Putative DNA-binding pr 24.7 90 0.0031 20.4 3.8 37 1-38 6-42 (147)
92 3qfu_A 78 kDa glucose-regulate 23.8 1.4E+02 0.0049 20.9 4.9 42 18-59 165-215 (394)
93 1xtp_A LMAJ004091AAA; SGPP, st 23.6 55 0.0019 21.2 2.5 35 2-36 185-232 (254)
94 3n1g_B Desert hedgehog protein 23.6 85 0.0029 22.0 3.7 35 8-45 125-160 (170)
95 3vc1_A Geranyl diphosphate 2-C 23.6 33 0.0011 23.7 1.5 42 2-43 209-270 (312)
96 2o57_A Putative sarcosine dime 23.0 28 0.00096 23.5 1.0 41 2-42 175-234 (297)
97 3jwh_A HEN1; methyltransferase 22.7 90 0.0031 19.9 3.4 35 2-36 129-186 (217)
98 1ws6_A Methyltransferase; stru 22.5 30 0.001 20.9 1.0 19 2-20 135-153 (171)
99 4fsd_A Arsenic methyltransfera 22.3 50 0.0017 23.9 2.3 36 2-37 191-246 (383)
100 3ccf_A Cyclopropane-fatty-acyl 21.9 55 0.0019 22.0 2.3 16 2-17 142-157 (279)
101 3dtn_A Putative methyltransfer 21.8 43 0.0015 21.6 1.7 13 2-14 136-148 (234)
102 3m33_A Uncharacterized protein 21.5 11 0.00038 24.8 -1.3 32 2-36 130-161 (226)
103 1nkv_A Hypothetical protein YJ 21.0 91 0.0031 20.2 3.2 40 2-41 128-186 (256)
104 1jce_A ROD shape-determining p 21.0 1.2E+02 0.0042 21.0 4.1 42 18-59 107-156 (344)
105 2nyt_A Probable C->U-editing e 20.4 91 0.0031 21.7 3.3 26 33-58 1-41 (190)
106 2e7v_A Transmembrane protease; 20.1 56 0.0019 21.4 2.0 31 11-45 76-111 (121)
107 3gjy_A Spermidine synthase; AP 20.1 50 0.0017 24.5 1.9 62 2-65 188-251 (317)
No 1
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=90.70 E-value=0.61 Score=31.45 Aligned_cols=53 Identities=6% Similarity=-0.037 Sum_probs=37.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEE--eeCCCCCCcceEEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLV--VDYPHSTKAKKFFLVLM 56 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlv--VD~P~S~kaKK~yLvL~ 56 (80)
++|++||+.++..-+...+.++.+.+...++||.---+ +..|.. ....+|++.
T Consensus 162 ~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~l~~~ 216 (240)
T 1xdz_A 162 PLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE--ESDRNIMVI 216 (240)
T ss_dssp GGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTT--CCEEEEEEE
T ss_pred HhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCC--CCceEEEEE
Confidence 68999999999877777777888888888999975433 345544 344555554
No 2
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=87.85 E-value=0.63 Score=33.51 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=31.4
Q ss_pred CcccCCc--eEEEEEc-cCChHHHHHHHHHHHHccccceEEeeCCCCCCc--ceEEEE
Q psy17720 2 RYCSRTA--RAVFQFY-PENSAQIELVTSQAMRAGFYGGLVVDYPHSTKA--KKFFLV 54 (80)
Q Consensus 2 ~~~~rGa--RAV~QfY-Pen~~Q~emI~~~A~kaGF~GGlvVD~P~S~ka--KK~yLv 54 (80)
++|++|| +.|+..+ |++++-.+.+. .++..|.++.+. |.+.|+ ...|++
T Consensus 179 r~LkpGG~~~~v~~~~~~~~~~~~~~l~--~l~~~f~~v~v~--P~~sR~~s~E~y~v 232 (276)
T 2wa2_A 179 RWLEYNQGCGFCVKVLNPYSCDVLEALM--KMQARFGGGLIR--VPLSRNSTHEMYFV 232 (276)
T ss_dssp HHHHHSTTCEEEEEESCCCSHHHHHHHH--HHHHHHCCEEEC--CTTSCTTCCCEEEE
T ss_pred HHhccCCCcEEEEEeCCCCchhHHHHHH--HHHHHcCCEEEE--cCCCCCcchheEEe
Confidence 5799999 9999866 56554445443 355678776665 666555 344443
No 3
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=83.20 E-value=0.94 Score=29.36 Aligned_cols=55 Identities=13% Similarity=0.053 Sum_probs=35.2
Q ss_pred CcccCCceEEEEEccCChH------------HHHHHHHHHHHcc-ccceEEeeCCCC--CCcceEEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSA------------QIELVTSQAMRAG-FYGGLVVDYPHS--TKAKKFFLVLM 56 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~------------Q~emI~~~A~kaG-F~GGlvVD~P~S--~kaKK~yLvL~ 56 (80)
++|++||+.++.+.+.... ..+.+.+...++| |.-=-+.+.+.. .+..+.||++.
T Consensus 129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~ 198 (211)
T 3e23_A 129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELAQFLHVS 198 (211)
T ss_dssp HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEEEEEEEE
T ss_pred HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCceEEEEE
Confidence 5799999999998775432 3566667778899 986444433222 22334565554
No 4
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=83.09 E-value=3 Score=27.28 Aligned_cols=42 Identities=5% Similarity=0.246 Sum_probs=32.2
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeCCCC
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHS 45 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S 45 (80)
++|++||+.++- .|...++.+.+.+...+.||.- ..+.+...
T Consensus 167 ~~LkpgG~l~~~-~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~g 208 (230)
T 3evz_A 167 DHLNPGGKVALY-LPDKEKLLNVIKERGIKLGYSV-KDIKFKVG 208 (230)
T ss_dssp GGEEEEEEEEEE-EESCHHHHHHHHHHHHHTTCEE-EEEEECCC
T ss_pred HHhCCCeEEEEE-ecccHhHHHHHHHHHHHcCCce-EEEEecCC
Confidence 679999999994 5777788999999999999943 23455443
No 5
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=82.26 E-value=1.4 Score=25.89 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=21.6
Q ss_pred CCceEEEEEccCChHHHHHHHHHHH
Q psy17720 6 RTARAVFQFYPENSAQIELVTSQAM 30 (80)
Q Consensus 6 rGaRAV~QfYPen~~Q~emI~~~A~ 30 (80)
.|++.++++.|+|.+|++++..-+.
T Consensus 6 ~~~~~~~rV~~~~~~q~~~L~~L~~ 30 (78)
T 2gjf_A 6 HGSKTIFVIVPTNEEQVAFLEALAK 30 (78)
T ss_dssp -CCCEEEEECCCSHHHHHHHHHHHT
T ss_pred CCCeeEEEEEcCCHHHHHHHHHHHh
Confidence 5899999999999999999987653
No 6
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=78.15 E-value=3.4 Score=28.65 Aligned_cols=53 Identities=21% Similarity=0.174 Sum_probs=38.7
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeC--CCCCCcceEEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDY--PHSTKAKKFFLVLM 56 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~--P~S~kaKK~yLvL~ 56 (80)
++|++||+.++-.=+...++++.+..++.+.||.---++++ |.. ..+.+|+++
T Consensus 172 ~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~--~~~R~l~~~ 226 (249)
T 3g89_A 172 PFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLS--GEARHLVVL 226 (249)
T ss_dssp GGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTT--CCEEEEEEE
T ss_pred HHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCC--CCcEEEEEE
Confidence 67999999998776666788888889999999976555555 544 334455544
No 7
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=77.51 E-value=5 Score=29.06 Aligned_cols=48 Identities=19% Similarity=0.351 Sum_probs=29.0
Q ss_pred CcccCCceEEEEEc-cCChHHHHHHHHHHHHccccceEEeeCCCCCCcc--eEEE
Q psy17720 2 RYCSRTARAVFQFY-PENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAK--KFFL 53 (80)
Q Consensus 2 ~~~~rGaRAV~QfY-Pen~~Q~emI~~~A~kaGF~GGlvVD~P~S~kaK--K~yL 53 (80)
++|++||+.|++++ |++++-.+++... +.-| +++.+-.| +.+.. ..|+
T Consensus 179 ~~LkpGG~~v~kv~~~~~~~~~~~l~~l--~~~f-~~v~~~kP-~sR~~s~E~y~ 229 (305)
T 2p41_A 179 NWLSNNTQFCVKVLNPYMSSVIEKMEAL--QRKH-GGALVRNP-LSRNSTHEMYW 229 (305)
T ss_dssp HHCCTTCEEEEEESCCCSHHHHHHHHHH--HHHH-CCEEECCT-TSCTTCCCEEE
T ss_pred HHhCCCCEEEEEeCCCCCchHHHHHHHH--HHHc-CCEEEecC-CCCCccHHHHH
Confidence 57999999999876 5444444444332 2224 45667778 44443 3555
No 8
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=77.07 E-value=1.8 Score=28.60 Aligned_cols=46 Identities=15% Similarity=0.254 Sum_probs=33.1
Q ss_pred CcccCCceEEEEEccCChH--------HHHHHHHHHHHccccceEEeeCCCCCC
Q psy17720 2 RYCSRTARAVFQFYPENSA--------QIELVTSQAMRAGFYGGLVVDYPHSTK 47 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~--------Q~emI~~~A~kaGF~GGlvVD~P~S~k 47 (80)
++|++||+.++..|+.... -.+.+.+...++||.---+.+.|++..
T Consensus 159 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 212 (235)
T 3lcc_A 159 ELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIP 212 (235)
T ss_dssp HHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCT
T ss_pred HHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCccc
Confidence 5799999999998876432 245666777889998766666666543
No 9
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=69.94 E-value=6.7 Score=30.01 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=31.7
Q ss_pred CceEEEEEccC-ChHHHHHHHHHHHHccccc-eEEeeCCCCC
Q psy17720 7 TARAVFQFYPE-NSAQIELVTSQAMRAGFYG-GLVVDYPHST 46 (80)
Q Consensus 7 GaRAV~QfYPe-n~~Q~emI~~~A~kaGF~G-GlvVD~P~S~ 46 (80)
++..-||+|+- +.+-.+-+.+.|.++||.. .+-||-|-..
T Consensus 121 ~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g 162 (352)
T 3sgz_A 121 EGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLG 162 (352)
T ss_dssp TCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCC
T ss_pred CccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCC
Confidence 46778999964 5566778889999999987 8888988653
No 10
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=67.31 E-value=9.9 Score=25.15 Aligned_cols=50 Identities=10% Similarity=0.359 Sum_probs=28.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeCCCCCCc--ceEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKA--KKFFLVL 55 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S~ka--KK~yLvL 55 (80)
++|++||+.|+.+|..... .+ + ...++..| +-+-+--|.+.|+ ...|+|.
T Consensus 127 ~~LkpGG~lv~k~~~~~~~-~~-~-~~~l~~~F-~~v~~~kP~asR~~s~E~y~v~ 178 (191)
T 3dou_A 127 RYLRNGGNVLLKQFQGDMT-ND-F-IAIWRKNF-SSYKISKPPASRGSSSEIYIMF 178 (191)
T ss_dssp HHEEEEEEEEEEEECSTHH-HH-H-HHHHGGGE-EEEEEECC------CCEEEEEE
T ss_pred HHccCCCEEEEEEcCCCCH-HH-H-HHHHHHhc-CEEEEECCCCccCCCceEEEEE
Confidence 5799999999999975542 22 2 23356666 4555656766653 3446554
No 11
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=67.13 E-value=11 Score=25.61 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=33.1
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceE-EeeCCCCCCcceEEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGL-VVDYPHSTKAKKFFLVLM 56 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGl-vVD~P~S~kaKK~yLvL~ 56 (80)
++|++||+.++-+-|+ +.+-+...+.+.||.--- ..=+|...+.-+.+|+..
T Consensus 164 ~~LkpgG~l~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 216 (259)
T 3lpm_A 164 SLLKQGGKANFVHRPE---RLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEG 216 (259)
T ss_dssp HHEEEEEEEEEEECTT---THHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEE
T ss_pred HHccCCcEEEEEEcHH---HHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEE
Confidence 5799999999955444 444466777788997533 223455555555665543
No 12
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=66.24 E-value=7.5 Score=26.79 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=33.5
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc-eEEeeCCCCCCcceEEEEEE
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG-GLVVDYPHSTKAKKFFLVLM 56 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G-GlvVD~P~S~kaKK~yLvL~ 56 (80)
++|++||+.++-+-++ +.+-+.+.+.+ .|.. -+.-.+|...+.-+.+|+..
T Consensus 158 ~~LkpgG~l~~~~~~~---~~~~~~~~l~~-~~~~~~i~~v~~~~~~~~~~~lv~~ 209 (260)
T 2ozv_A 158 AIMVSGGQLSLISRPQ---SVAEIIAACGS-RFGGLEITLIHPRPGEDAVRMLVTA 209 (260)
T ss_dssp HHEEEEEEEEEEECGG---GHHHHHHHHTT-TEEEEEEEEEESSTTSCCCEEEEEE
T ss_pred HHcCCCCEEEEEEcHH---HHHHHHHHHHh-cCCceEEEEEcCCCCCCceEEEEEE
Confidence 5799999999966543 55556565555 4643 45556677666667776654
No 13
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=65.77 E-value=1.8 Score=28.13 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=26.0
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++..+.......+.+.+...++||.-
T Consensus 139 ~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 139 RVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKI 173 (215)
T ss_dssp HHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEE
T ss_pred HhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEE
Confidence 57899999999766554335566667788899963
No 14
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=65.71 E-value=11 Score=23.85 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=33.1
Q ss_pred CcccCCceEEEEEccC-Ch----------------------------HHHHHHHHHHHHccccceEEee--CCCCCCcce
Q psy17720 2 RYCSRTARAVFQFYPE-NS----------------------------AQIELVTSQAMRAGFYGGLVVD--YPHSTKAKK 50 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe-n~----------------------------~Q~emI~~~A~kaGF~GGlvVD--~P~S~kaKK 50 (80)
++|++||+.++..+.. +. -..+-+.+...++||.---+.+ +|.+.....
T Consensus 140 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~ 219 (227)
T 3e8s_A 140 TLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQS 219 (227)
T ss_dssp HTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSC
T ss_pred HHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCcee
Confidence 5789999999986411 00 0356677888899998654444 355433445
Q ss_pred EEEE
Q psy17720 51 FFLV 54 (80)
Q Consensus 51 ~yLv 54 (80)
++++
T Consensus 220 ~~~v 223 (227)
T 3e8s_A 220 LLMV 223 (227)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 15
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=64.97 E-value=4 Score=26.27 Aligned_cols=32 Identities=9% Similarity=0.079 Sum_probs=24.1
Q ss_pred CcccCCceEEEE-EccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQ-FYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~Q-fYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++. +.++ +.+.+.+...++||.-
T Consensus 147 ~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 147 SHLNEDGQVIFSGIDYL---QLPKIEQALAENSFQI 179 (205)
T ss_dssp GGEEEEEEEEEEEEEGG---GHHHHHHHHHHTTEEE
T ss_pred HhcCCCCEEEEEecCcc---cHHHHHHHHHHcCCce
Confidence 689999999997 4444 4566667778899863
No 16
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=64.92 E-value=6.6 Score=27.87 Aligned_cols=43 Identities=23% Similarity=0.398 Sum_probs=27.8
Q ss_pred CcccCCc--eEEEEEc-cCChHHHHHHHHHHHHccccceEEeeCCCCCC
Q psy17720 2 RYCSRTA--RAVFQFY-PENSAQIELVTSQAMRAGFYGGLVVDYPHSTK 47 (80)
Q Consensus 2 ~~~~rGa--RAV~QfY-Pen~~Q~emI~~~A~kaGF~GGlvVD~P~S~k 47 (80)
++|++|| +.|+..+ |..++-++++.. ++.-|.+..++. |-|..
T Consensus 171 r~LkpGG~~~fv~kv~~~~~~~~~~~l~~--l~~~f~~v~~~k-~~sR~ 216 (265)
T 2oxt_A 171 KWKVKNPSADFVVKVLCPYSVEVMERLSV--MQRKWGGGLVRN-PYSRN 216 (265)
T ss_dssp HHHHHCTTCEEEEEESCTTSHHHHHHHHH--HHHHHCCEEECC-TTSCT
T ss_pred HHhccCCCeEEEEEeCCCCChhHHHHHHH--HHHHcCCEEEEE-ecccC
Confidence 5799999 9999877 555544455543 444566666666 65533
No 17
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=64.20 E-value=7.9 Score=24.89 Aligned_cols=31 Identities=10% Similarity=0.056 Sum_probs=25.2
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGF 34 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF 34 (80)
++|++||+.++.... .++.+.+.....++||
T Consensus 130 ~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 130 RRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGY 160 (204)
T ss_dssp HHCCTTCEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred HhcCCCeEEEEEecc--cccHHHHHHHHHHCCC
Confidence 579999999997654 4567777788889999
No 18
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=62.74 E-value=10 Score=23.32 Aligned_cols=35 Identities=23% Similarity=0.100 Sum_probs=27.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++.+.+...-..+.+.....++||.-
T Consensus 135 ~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 135 RALGADGRAVIGFGAGRGWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp HHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEE
T ss_pred HHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEE
Confidence 57899999999887765555667778888899974
No 19
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=62.74 E-value=8.3 Score=24.22 Aligned_cols=44 Identities=7% Similarity=-0.006 Sum_probs=25.4
Q ss_pred CcccCCceEEEEEccCC---hHHHHHHHHHHHHccccc--eEEeeCCCC
Q psy17720 2 RYCSRTARAVFQFYPEN---SAQIELVTSQAMRAGFYG--GLVVDYPHS 45 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen---~~Q~emI~~~A~kaGF~G--GlvVD~P~S 45 (80)
++|++||+.++-.|+.. .++.+.+...+....-.+ =+...|.|+
T Consensus 123 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 171 (185)
T 3mti_A 123 DRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQ 171 (185)
T ss_dssp HHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSC
T ss_pred HhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhcc
Confidence 57999999999999643 345556655555544322 233344554
No 20
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=61.30 E-value=11 Score=25.94 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=25.4
Q ss_pred HHHHHHHHHHccccceEEeeCCCCCCcceEEEEEEec
Q psy17720 22 IELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTG 58 (80)
Q Consensus 22 ~emI~~~A~kaGF~GGlvVD~P~S~kaKK~yLvL~~G 58 (80)
.+-|.....++||.---+.+++....-..-++++.+.
T Consensus 254 ~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 254 PDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 4567788899999987788887655444445555543
No 21
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=59.28 E-value=2.8 Score=26.47 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=21.7
Q ss_pred CcccCCceEEEEEccCCh-------HHHHHHHHHHHHccc
Q psy17720 2 RYCSRTARAVFQFYPENS-------AQIELVTSQAMRAGF 34 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~-------~Q~emI~~~A~kaGF 34 (80)
|+||+||+.+++-..... .-.+.+.+...++||
T Consensus 89 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 89 RILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp HHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred HHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 689999999995211110 014556677889999
No 22
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=55.69 E-value=10 Score=23.91 Aligned_cols=16 Identities=0% Similarity=-0.047 Sum_probs=13.2
Q ss_pred CcccCCceEEEEEccC
Q psy17720 2 RYCSRTARAVFQFYPE 17 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe 17 (80)
++|++||+.|+..+..
T Consensus 133 ~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 133 DILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHEEEEEEEEEEECCS
T ss_pred HHhcCCCEEEEEecCC
Confidence 5799999999996643
No 23
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=53.11 E-value=19 Score=24.67 Aligned_cols=16 Identities=6% Similarity=0.083 Sum_probs=13.5
Q ss_pred CcccCCceEEEEEccC
Q psy17720 2 RYCSRTARAVFQFYPE 17 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe 17 (80)
++|++||+.+++..-.
T Consensus 171 ~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 171 NLTPDDGRMLLHTITI 186 (302)
T ss_dssp HSSCTTCEEEEEEEEC
T ss_pred HhcCCCcEEEEEEEec
Confidence 5899999999998643
No 24
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=52.15 E-value=20 Score=26.67 Aligned_cols=38 Identities=32% Similarity=0.495 Sum_probs=30.2
Q ss_pred ceEEEEEc-cCChHHHHHHHHHHHHccccc-eEEeeCCCC
Q psy17720 8 ARAVFQFY-PENSAQIELVTSQAMRAGFYG-GLVVDYPHS 45 (80)
Q Consensus 8 aRAV~QfY-Pen~~Q~emI~~~A~kaGF~G-GlvVD~P~S 45 (80)
+.-.||+| +.+.+..+-+...|.++||.. .|-+|-|..
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 56789999 888888888888899999865 666676654
No 25
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=52.13 E-value=11 Score=23.11 Aligned_cols=32 Identities=9% Similarity=-0.109 Sum_probs=25.6
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHcccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFY 35 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~ 35 (80)
++|++||+.++-.+. .+..+.+.....+.||.
T Consensus 122 ~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 122 DKLKPGGRIIVTAIL--LETKFEAMECLRDLGFD 153 (192)
T ss_dssp HTEEEEEEEEEEECB--HHHHHHHHHHHHHTTCC
T ss_pred HhcCCCcEEEEEecC--cchHHHHHHHHHHCCCc
Confidence 578999999998764 56667777888899994
No 26
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=51.28 E-value=24 Score=27.85 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=32.2
Q ss_pred CceEEEEEc-cCChHHHHHHHHHHHHccccc-eEEeeCCCC
Q psy17720 7 TARAVFQFY-PENSAQIELVTSQAMRAGFYG-GLVVDYPHS 45 (80)
Q Consensus 7 GaRAV~QfY-Pen~~Q~emI~~~A~kaGF~G-GlvVD~P~S 45 (80)
+..-.||+| +.+.+.++.+...|.++||.+ .|-||-|..
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~ 286 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSL 286 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSC
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc
Confidence 456789999 777888888889999999977 777887763
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=51.05 E-value=15 Score=24.15 Aligned_cols=35 Identities=14% Similarity=-0.005 Sum_probs=24.1
Q ss_pred CcccCCceEEEEEccCChH----------------HHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSA----------------QIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~----------------Q~emI~~~A~kaGF~G 36 (80)
++|++||+.+++..-...- -.+.+.+...++||.-
T Consensus 128 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 128 SKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp HHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred HHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 5799999999987432211 1255667778899983
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=49.54 E-value=39 Score=21.29 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=31.0
Q ss_pred CcccCCceEEEEEccCCh-------------HHHHHHHHHHHHccccceEEeeCCC
Q psy17720 2 RYCSRTARAVFQFYPENS-------------AQIELVTSQAMRAGFYGGLVVDYPH 44 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~-------------~Q~emI~~~A~kaGF~GGlvVD~P~ 44 (80)
++|++||+.++....... -..+.+.+...++||.-=-+..+|.
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 579999999998754332 1245566777889998766777766
No 29
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=49.29 E-value=12 Score=23.91 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=24.6
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEe--eCCCCC
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVV--DYPHST 46 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvV--D~P~S~ 46 (80)
++|++||+.++...+...+.++.+.. ||.-=-+. .+|...
T Consensus 153 ~~L~~gG~l~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~ 194 (207)
T 1jsx_A 153 HLPGEQGRFYALKGQMPEDEIALLPE-----EYQVESVVKLQVPALD 194 (207)
T ss_dssp TSEEEEEEEEEEESSCCHHHHHTSCT-----TEEEEEEEEEECC--C
T ss_pred HhcCCCcEEEEEeCCCchHHHHHHhc-----CCceeeeeeeccCCCC
Confidence 68999999999988876665554432 77432222 566653
No 30
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=48.76 E-value=27 Score=21.81 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=26.0
Q ss_pred CcccCCce-EEEEEccCChHHHHHHHHHHH--Hccccc-eEEeeCCC
Q psy17720 2 RYCSRTAR-AVFQFYPENSAQIELVTSQAM--RAGFYG-GLVVDYPH 44 (80)
Q Consensus 2 ~~~~rGaR-AV~QfYPen~~Q~emI~~~A~--kaGF~G-GlvVD~P~ 44 (80)
++|++||+ .++.+-.. +.+.+.+... +.||.- .+.-|+..
T Consensus 152 ~~LkpgG~l~~~~~~~~---~~~~~~~~l~~~~~gf~~~~~~~~~~~ 195 (215)
T 4dzr_A 152 YVLARGRAGVFLEVGHN---QADEVARLFAPWRERGFRVRKVKDLRG 195 (215)
T ss_dssp GGBCSSSEEEEEECTTS---CHHHHHHHTGGGGGGTEECCEEECTTS
T ss_pred HHhcCCCeEEEEEECCc---cHHHHHHHHHHhhcCCceEEEEEecCC
Confidence 68999999 77766443 4455556666 889954 44445443
No 31
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=48.73 E-value=20 Score=23.24 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=24.5
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHcccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFY 35 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~ 35 (80)
++|++||+.++.. .+.++.+-+.+....+||.
T Consensus 144 ~~LkpgG~l~~~~--~~~~~~~~~~~~~~~~g~~ 175 (214)
T 1yzh_A 144 RILPENGEIHFKT--DNRGLFEYSLVSFSQYGMK 175 (214)
T ss_dssp HHSCTTCEEEEEE--SCHHHHHHHHHHHHHHTCE
T ss_pred HHcCCCcEEEEEe--CCHHHHHHHHHHHHHCCCe
Confidence 4799999988875 3456777777777788985
No 32
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=47.04 E-value=12 Score=26.59 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=27.2
Q ss_pred CcccCCceEEEEEcc--CChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYP--ENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP--en~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+-++|... ......+.+.+...++||..
T Consensus 198 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~ 234 (304)
T 3bwc_A 198 RILKPDGICCNQGESIWLDLELIEKMSRFIRETGFAS 234 (304)
T ss_dssp HHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSE
T ss_pred HhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCc
Confidence 579999999999643 23456778888888999974
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=46.88 E-value=33 Score=25.71 Aligned_cols=39 Identities=23% Similarity=0.186 Sum_probs=29.0
Q ss_pred CceEEEEEcc-CChHHHHHHHHHHHHccccc-eEEeeCCCC
Q psy17720 7 TARAVFQFYP-ENSAQIELVTSQAMRAGFYG-GLVVDYPHS 45 (80)
Q Consensus 7 GaRAV~QfYP-en~~Q~emI~~~A~kaGF~G-GlvVD~P~S 45 (80)
++.-.||+|. .+.+..+-+...|.++||.. .|-+|-|-.
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~ 172 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVS 172 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC--
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcc
Confidence 5667999997 66677777778889999965 667787754
No 34
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=45.62 E-value=22 Score=23.35 Aligned_cols=31 Identities=19% Similarity=0.121 Sum_probs=24.6
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGF 34 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF 34 (80)
++|++||+.|+.... .++.+.+.....+.||
T Consensus 142 ~~LkpgG~lv~~~~~--~~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 142 EWLAPGTRIVANAVT--LESETLLTQLHARHGG 172 (204)
T ss_dssp HHSCTTCEEEEEECS--HHHHHHHHHHHHHHCS
T ss_pred HhcCCCcEEEEEecC--cccHHHHHHHHHhCCC
Confidence 579999999998874 5677777777777774
No 35
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=45.35 E-value=21 Score=23.57 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=23.5
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHcccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFY 35 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~ 35 (80)
++|++||+.++.. .+.++.+-+.......||.
T Consensus 141 ~~LkpgG~l~~~t--d~~~~~~~~~~~~~~~g~~ 172 (213)
T 2fca_A 141 EVMGKGGSIHFKT--DNRGLFEYSLKSFSEYGLL 172 (213)
T ss_dssp HHHTTSCEEEEEE--SCHHHHHHHHHHHHHHTCE
T ss_pred HHcCCCCEEEEEe--CCHHHHHHHHHHHHHCCCc
Confidence 5799999998875 3566776666666777873
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=45.31 E-value=25 Score=22.44 Aligned_cols=43 Identities=19% Similarity=0.020 Sum_probs=29.7
Q ss_pred CcccCCceEEEEEccCChH----------HHHHHHHHHHHccccceEEeeCCC
Q psy17720 2 RYCSRTARAVFQFYPENSA----------QIELVTSQAMRAGFYGGLVVDYPH 44 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~----------Q~emI~~~A~kaGF~GGlvVD~P~ 44 (80)
++|++||+.++..+-.... ..+.+.+...++||.---+.+++.
T Consensus 131 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 131 RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK 183 (219)
T ss_dssp HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT
T ss_pred HHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC
Confidence 5799999999975432211 246677788889998666666654
No 37
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=44.98 E-value=55 Score=20.51 Aligned_cols=57 Identities=7% Similarity=-0.055 Sum_probs=33.0
Q ss_pred CcccCCceEEEEEccC---ChHHHHHHHHHHHHccccc--eEEeeCCCCCCcceEEEEEEec
Q psy17720 2 RYCSRTARAVFQFYPE---NSAQIELVTSQAMRAGFYG--GLVVDYPHSTKAKKFFLVLMTG 58 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe---n~~Q~emI~~~A~kaGF~G--GlvVD~P~S~kaKK~yLvL~~G 58 (80)
++|++||+.++-.|+. ..++.+.+........-.+ -+.++|.|....--+++++...
T Consensus 127 ~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~~~~~~~~ 188 (197)
T 3eey_A 127 ELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKI 188 (197)
T ss_dssp HHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCEEEEEEEC
T ss_pred HhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCeEEEEEEc
Confidence 5789999999988653 3445555555554444322 2334555554455555555544
No 38
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=44.69 E-value=29 Score=22.15 Aligned_cols=13 Identities=15% Similarity=0.273 Sum_probs=11.5
Q ss_pred CcccCCceEEEEE
Q psy17720 2 RYCSRTARAVFQF 14 (80)
Q Consensus 2 ~~~~rGaRAV~Qf 14 (80)
++|++||+.++..
T Consensus 133 ~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 133 QLLNKGGKIVFAD 145 (220)
T ss_dssp HHSCTTCEEEEEE
T ss_pred HhcCCCCEEEEEe
Confidence 5799999999985
No 39
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=44.44 E-value=11 Score=25.76 Aligned_cols=33 Identities=21% Similarity=0.146 Sum_probs=24.6
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++.-.. ..|.+.+.+...++||.-
T Consensus 206 ~~LkpgG~lils~~~--~~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 206 EALVPGGRALLTGIL--KDRAPLVREAMAGAGFRP 238 (254)
T ss_dssp HHEEEEEEEEEEEEE--GGGHHHHHHHHHHTTCEE
T ss_pred HHcCCCCEEEEEeec--cCCHHHHHHHHHHCCCEE
Confidence 578999999996332 246777778888899963
No 40
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=43.71 E-value=10 Score=26.44 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=29.4
Q ss_pred CcccCCceEEEEEccC----ChHHHHHHHHHHHHccccceE
Q psy17720 2 RYCSRTARAVFQFYPE----NSAQIELVTSQAMRAGFYGGL 38 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe----n~~Q~emI~~~A~kaGF~GGl 38 (80)
++|++||+.++.-+-. ..+..+.|.+++.++||.--+
T Consensus 213 ~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 5799999999876642 256778889999999998665
No 41
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=42.25 E-value=45 Score=24.97 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=29.9
Q ss_pred CceEEEEEccCChHHHHHHHHHHHHccccceEE-eeCCCCCC
Q psy17720 7 TARAVFQFYPENSAQIELVTSQAMRAGFYGGLV-VDYPHSTK 47 (80)
Q Consensus 7 GaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlv-VD~P~S~k 47 (80)
++...||+|+-..+...-+...|.++||..=++ ||-|...+
T Consensus 123 ~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~ 164 (380)
T 1p4c_A 123 DGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGY 164 (380)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCC
T ss_pred CCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccc
Confidence 566789999644666777788888999876433 78887644
No 42
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=41.91 E-value=31 Score=25.40 Aligned_cols=45 Identities=9% Similarity=-0.016 Sum_probs=32.0
Q ss_pred CcccCCceEEEEEccCCh---HHHHHHHHHHHHcccc----ceEEeeCCCCC
Q psy17720 2 RYCSRTARAVFQFYPENS---AQIELVTSQAMRAGFY----GGLVVDYPHST 46 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~---~Q~emI~~~A~kaGF~----GGlvVD~P~S~ 46 (80)
++|++||.-++...+.+. .=.++|..+|.++|+. .+.-.|||...
T Consensus 319 ~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~D~p~~~ 370 (385)
T 2b78_A 319 EILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNV 370 (385)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEEECCCTTSCCCT
T ss_pred HhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEeCCCCCCCCCCC
Confidence 579999999999988774 3356777888888876 12223677653
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=41.87 E-value=19 Score=24.31 Aligned_cols=15 Identities=7% Similarity=0.069 Sum_probs=12.6
Q ss_pred CcccCCceEEEEEcc
Q psy17720 2 RYCSRTARAVFQFYP 16 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP 16 (80)
++|++||+.+++..-
T Consensus 156 ~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 156 RLLPADGVMLLHTIT 170 (287)
T ss_dssp HHSCTTCEEEEEEEE
T ss_pred HhcCCCCEEEEEEec
Confidence 579999999998753
No 44
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=40.33 E-value=15 Score=24.34 Aligned_cols=37 Identities=11% Similarity=-0.062 Sum_probs=27.9
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHcc--ccceEEe
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAG--FYGGLVV 40 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaG--F~GGlvV 40 (80)
++|++||+.++-. -+.+|.+.+.+...+.| |.-=-++
T Consensus 182 ~~L~~gG~l~~~~--~~~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 182 KALKPGGFFVAYT--PCSNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHEEEEEEEEEEE--SSHHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred HHcCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCccccEEE
Confidence 5789999988743 35678888888889999 8753333
No 45
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=40.12 E-value=39 Score=24.73 Aligned_cols=56 Identities=20% Similarity=0.116 Sum_probs=35.9
Q ss_pred CcccCCceEEEEEccCC---h----------------HHHHHHHHHHHHccccceEEeeCCCC--CCcceEEEEEEe
Q psy17720 2 RYCSRTARAVFQFYPEN---S----------------AQIELVTSQAMRAGFYGGLVVDYPHS--TKAKKFFLVLMT 57 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen---~----------------~Q~emI~~~A~kaGF~GGlvVD~P~S--~kaKK~yLvL~~ 57 (80)
|+|++||+.|+=+-|.- . .-.+.+...+..+||.---++.-|.. ..+..|++.+..
T Consensus 173 rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 173 KILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred HHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 68999999988544411 1 12455778888999985445555653 345566666654
No 46
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=40.03 E-value=57 Score=19.24 Aligned_cols=44 Identities=14% Similarity=0.145 Sum_probs=25.8
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeCCCCCCcc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAK 49 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S~kaK 49 (80)
++|++||+.++..+..... +.+.....+ .|. .+-+-.|++.+..
T Consensus 124 ~~L~~gG~l~~~~~~~~~~--~~~~~~~~~-~~~-~~~~~~~~~~~~~ 167 (180)
T 1ej0_A 124 DVLAPGGSFVVKVFQGEGF--DEYLREIRS-LFT-KVKVRKPDSSRAR 167 (180)
T ss_dssp HHEEEEEEEEEEEESSTTH--HHHHHHHHH-HEE-EEEEECCTTSCTT
T ss_pred HHcCCCcEEEEEEecCCcH--HHHHHHHHH-hhh-hEEeecCCccccc
Confidence 5789999999987765433 233333333 353 4455567665543
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=39.32 E-value=58 Score=19.84 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=12.3
Q ss_pred CcccCCceEEEEEcc
Q psy17720 2 RYCSRTARAVFQFYP 16 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP 16 (80)
++|++||+.++..+.
T Consensus 100 ~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 100 RILKDDGRVIIIDWR 114 (170)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HhcCCCCEEEEEEcC
Confidence 578999999998653
No 48
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=39.02 E-value=19 Score=25.98 Aligned_cols=47 Identities=21% Similarity=0.062 Sum_probs=32.0
Q ss_pred CcccCCceEEEEEc---------------cCChH--HHHHHHHHHHHccccceEEeeCCCCCCc
Q psy17720 2 RYCSRTARAVFQFY---------------PENSA--QIELVTSQAMRAGFYGGLVVDYPHSTKA 48 (80)
Q Consensus 2 ~~~~rGaRAV~QfY---------------Pen~~--Q~emI~~~A~kaGF~GGlvVD~P~S~ka 48 (80)
++|++||+.++++- ++... -.+.+...+.++||.-=-+..+|.....
T Consensus 196 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~ 259 (416)
T 4e2x_A 196 ALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGE 259 (416)
T ss_dssp HHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSE
T ss_pred HHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCE
Confidence 57999999999852 11110 1356778888999987777777765444
No 49
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=38.97 E-value=53 Score=21.12 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=27.1
Q ss_pred EEEEEccCChHHHHHHHHHHHHccccceEEee
Q psy17720 10 AVFQFYPENSAQIELVTSQAMRAGFYGGLVVD 41 (80)
Q Consensus 10 AV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD 41 (80)
-|+++.|.++...--.+..|.|+|=.+-||..
T Consensus 59 rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~w 90 (119)
T 1ofu_X 59 RILLLQAKDNAAALALSCEALRLGRSHTVVSW 90 (119)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HEEEEECCCcHHHHHHHHHHHhcCCccEEEEC
Confidence 48899999998888889999999977766654
No 50
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=38.85 E-value=32 Score=23.66 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=12.6
Q ss_pred CcccCCceEEEEEcc
Q psy17720 2 RYCSRTARAVFQFYP 16 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP 16 (80)
++|++||+.+++..-
T Consensus 182 ~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 182 NIMPADGRMTVQSSV 196 (318)
T ss_dssp HHSCTTCEEEEEEEE
T ss_pred HhcCCCcEEEEEEec
Confidence 579999999998753
No 51
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=38.66 E-value=18 Score=23.33 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=23.8
Q ss_pred CcccCCceEEEEEcc--------------C-ChHH-HHHHHHHHHHccccce
Q psy17720 2 RYCSRTARAVFQFYP--------------E-NSAQ-IELVTSQAMRAGFYGG 37 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP--------------e-n~~Q-~emI~~~A~kaGF~GG 37 (80)
++|++||+.++.+-. + +.+. .+.+......+||.--
T Consensus 128 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 128 AVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp HTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred HHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 689999999998632 1 2222 3336677788999643
No 52
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=38.40 E-value=32 Score=22.59 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=14.4
Q ss_pred HHHHHHHHHHccccceEEeeC
Q psy17720 22 IELVTSQAMRAGFYGGLVVDY 42 (80)
Q Consensus 22 ~emI~~~A~kaGF~GGlvVD~ 42 (80)
.+.+.+...++||.-=-+.+.
T Consensus 196 ~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 196 VTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHHHcCCeeeeeecC
Confidence 456668888999986444444
No 53
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=38.18 E-value=30 Score=22.96 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=18.0
Q ss_pred HHHHHHHHHHccccceEEeeCCCCCCcceEEEE
Q psy17720 22 IELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLV 54 (80)
Q Consensus 22 ~emI~~~A~kaGF~GGlvVD~P~S~kaKK~yLv 54 (80)
.+-|.+...++||. +++.+......-+|++
T Consensus 217 ~~el~~ll~~aGF~---v~~~~~~~~~~~~~va 246 (263)
T 3pfg_A 217 REQYERAFTAAGLS---VEFMPGGPSGRGLFTG 246 (263)
T ss_dssp HHHHHHHHHHTTEE---EEEESSTTTSSCEEEE
T ss_pred HHHHHHHHHHCCCE---EEEeeCCCCCceeEEE
Confidence 46677888899995 4444444334444443
No 54
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=38.18 E-value=11 Score=26.56 Aligned_cols=43 Identities=5% Similarity=0.080 Sum_probs=23.2
Q ss_pred cccCCceEEEEEccCChHHH-------HHHHHHHHHccccceEEeeC-CCC
Q psy17720 3 YCSRTARAVFQFYPENSAQI-------ELVTSQAMRAGFYGGLVVDY-PHS 45 (80)
Q Consensus 3 ~~~rGaRAV~QfYPen~~Q~-------emI~~~A~kaGF~GGlvVD~-P~S 45 (80)
+||+|||-|+-+++...+.. +.......+.||.=-=+++. |..
T Consensus 170 ~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~ 220 (232)
T 3id6_C 170 FLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYD 220 (232)
T ss_dssp HEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTC
T ss_pred hCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 78999999999887652221 22334444668864444444 554
No 55
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=37.86 E-value=28 Score=20.02 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=17.7
Q ss_pred EEEEEccCChHHHHHHHHHHH
Q psy17720 10 AVFQFYPENSAQIELVTSQAM 30 (80)
Q Consensus 10 AV~QfYPen~~Q~emI~~~A~ 30 (80)
-|+.+.|+|.+|++.+..-+.
T Consensus 2 kV~rv~~~~~~q~~~L~~L~~ 22 (79)
T 1vjq_A 2 TIFVIVPTNEEQVAFLEALAK 22 (79)
T ss_dssp EEEEECCCSHHHHHHHHHHHT
T ss_pred eEEEEEcCCHHHHHHHHHHhc
Confidence 488999999999999987653
No 56
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=37.85 E-value=15 Score=25.10 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=26.7
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc-eEEeeCCC
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG-GLVVDYPH 44 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G-GlvVD~P~ 44 (80)
++|++||+.++..-+.+. +.+.+...++||.- .+.-|+-.
T Consensus 226 ~~LkpgG~l~~~~~~~~~---~~~~~~l~~~Gf~~v~~~~d~~g 266 (276)
T 2b3t_A 226 NALVSGGFLLLEHGWQQG---EAVRQAFILAGYHDVETCRDYGD 266 (276)
T ss_dssp GGEEEEEEEEEECCSSCH---HHHHHHHHHTTCTTCCEEECTTS
T ss_pred HhcCCCCEEEEEECchHH---HHHHHHHHHCCCcEEEEEecCCC
Confidence 579999999998655544 44555566789964 44445543
No 57
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=37.59 E-value=55 Score=22.11 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=27.0
Q ss_pred CcccCCceEEEEEcc-CC------------hHHHHHHHHHHHHccccceEEeeCC
Q psy17720 2 RYCSRTARAVFQFYP-EN------------SAQIELVTSQAMRAGFYGGLVVDYP 43 (80)
Q Consensus 2 ~~~~rGaRAV~QfYP-en------------~~Q~emI~~~A~kaGF~GGlvVD~P 43 (80)
++||+||+.++-..- ++ .--.+.+.+...++||.---+..++
T Consensus 185 r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 185 SLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 789999999998521 11 0124456677788999854444444
No 58
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=37.22 E-value=52 Score=23.83 Aligned_cols=35 Identities=6% Similarity=-0.091 Sum_probs=25.3
Q ss_pred CcccCCceE-EEEEcc--CChHHHHHHHHHHH-Hccccc
Q psy17720 2 RYCSRTARA-VFQFYP--ENSAQIELVTSQAM-RAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRA-V~QfYP--en~~Q~emI~~~A~-kaGF~G 36 (80)
++|++|||. ++-+.+ ++..+.+.+..... +.||..
T Consensus 265 ~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 265 ATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp HTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred HHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 579999964 888877 77755566666666 788854
No 59
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=36.94 E-value=17 Score=23.81 Aligned_cols=33 Identities=15% Similarity=-0.108 Sum_probs=25.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++-.- +.+|.+.+.+...++||.-
T Consensus 186 ~~L~~gG~l~~~~~--~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 186 LALKPDRFLVAYLP--NITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp HHEEEEEEEEEEES--CHHHHHHHHHHHTTTTEEE
T ss_pred HhCCCCCEEEEEeC--CHHHHHHHHHHHHHCCCce
Confidence 47899999988553 4578888888888899863
No 60
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=36.54 E-value=43 Score=22.70 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=26.5
Q ss_pred CcccCCceEEEEE------cc-------CChHHHHHHHHHHHHccccceEEeeCC
Q psy17720 2 RYCSRTARAVFQF------YP-------ENSAQIELVTSQAMRAGFYGGLVVDYP 43 (80)
Q Consensus 2 ~~~~rGaRAV~Qf------YP-------en~~Q~emI~~~A~kaGF~GGlvVD~P 43 (80)
++||+||+.++.. |. ...--.+.+.+...++||.-=-+.++|
T Consensus 203 r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 203 TLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp TTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 6899999999863 21 111123455666778999865555554
No 61
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=36.10 E-value=17 Score=23.65 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=23.9
Q ss_pred CcccCCceEEEEEccCChH---------------------HHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSA---------------------QIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~---------------------Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++...+.+.. ..+.+.+...++||.-
T Consensus 127 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 127 RILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp HHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred HHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 5789999999987654322 2345666777888864
No 62
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=36.07 E-value=62 Score=24.53 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=29.2
Q ss_pred CceEEEEEcc-CChHHHHHHHHHHHHccccc-eEEeeCCCC
Q psy17720 7 TARAVFQFYP-ENSAQIELVTSQAMRAGFYG-GLVVDYPHS 45 (80)
Q Consensus 7 GaRAV~QfYP-en~~Q~emI~~~A~kaGF~G-GlvVD~P~S 45 (80)
++.-.||+|. .+.+..+-+...|.++||.. .+-+|-|-.
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~ 186 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYL 186 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 5667899997 66777777778889999875 444677764
No 63
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=35.95 E-value=66 Score=20.88 Aligned_cols=42 Identities=12% Similarity=-0.080 Sum_probs=26.8
Q ss_pred CcccCCceEEEEEccC------C-------hHHHHHHHHHHHHccccceEEeeCC
Q psy17720 2 RYCSRTARAVFQFYPE------N-------SAQIELVTSQAMRAGFYGGLVVDYP 43 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe------n-------~~Q~emI~~~A~kaGF~GGlvVD~P 43 (80)
++|++||+.++..... + .-..+.+.+...++||.-=-+..+|
T Consensus 186 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 186 SLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred hhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 6899999999865221 1 1124456677778999764444444
No 64
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=35.78 E-value=1e+02 Score=21.98 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=30.5
Q ss_pred ChHHHHHHHHHHHHccccceEEeeCC--------CCCC----cceEEEEEEecC
Q psy17720 18 NSAQIELVTSQAMRAGFYGGLVVDYP--------HSTK----AKKFFLVLMTGG 59 (80)
Q Consensus 18 n~~Q~emI~~~A~kaGF~GGlvVD~P--------~S~k----aKK~yLvL~~G~ 59 (80)
++.|++.+..+|.+|||.-=.+|+=| .... ..+.+||+..|+
T Consensus 170 ~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~Gg 223 (404)
T 3i33_A 170 NDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGG 223 (404)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCC
Confidence 67899999999999999754444432 2222 567789999887
No 65
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=35.58 E-value=29 Score=25.09 Aligned_cols=50 Identities=24% Similarity=0.265 Sum_probs=34.0
Q ss_pred eEEEEEccC--ChHHHHHHHHHHHHccccceEEeeCCC-----------CCCcceEEEEEEecC
Q psy17720 9 RAVFQFYPE--NSAQIELVTSQAMRAGFYGGLVVDYPH-----------STKAKKFFLVLMTGG 59 (80)
Q Consensus 9 RAV~QfYPe--n~~Q~emI~~~A~kaGF~GGlvVD~P~-----------S~kaKK~yLvL~~G~ 59 (80)
++|+= .|. ++.|++.+.++|.+|||.-=.+|+=|. .....+.+||+..|+
T Consensus 152 ~~vit-vPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~Gg 214 (409)
T 4gni_A 152 SAVIT-IPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGG 214 (409)
T ss_dssp EEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECS
T ss_pred eEEEE-ECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCC
Confidence 45553 454 688999999999999997544454331 124566789999887
No 66
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=35.05 E-value=24 Score=24.02 Aligned_cols=33 Identities=9% Similarity=-0.023 Sum_probs=25.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++..- +.+|.+.+.....+.||.-
T Consensus 201 ~~L~pgG~l~~~~~--~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 201 EALKGGGRFATVCP--TTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp HHEEEEEEEEEEES--SHHHHHHHHHHHHHSSEEE
T ss_pred HHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCce
Confidence 57899999888653 4578888888888899963
No 67
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=32.32 E-value=61 Score=19.65 Aligned_cols=31 Identities=10% Similarity=-0.034 Sum_probs=21.0
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGF 34 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF 34 (80)
++|++||+.++.... .+..+.+.....+.|+
T Consensus 115 ~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 115 KRLPVGGRLVANAVT--VESEQMLWALRKQFGG 145 (178)
T ss_dssp HTCCTTCEEEEEECS--HHHHHHHHHHHHHHCC
T ss_pred HhcCCCCEEEEEeec--cccHHHHHHHHHHcCC
Confidence 579999999998764 3444455555556664
No 68
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=32.28 E-value=52 Score=24.06 Aligned_cols=43 Identities=26% Similarity=0.457 Sum_probs=33.4
Q ss_pred ccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeCCCCCCcceEEEEEEecC
Q psy17720 4 CSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 59 (80)
Q Consensus 4 ~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S~kaKK~yLvL~~G~ 59 (80)
|-=|+|.|-+|=.+| +..|..|+|..=|++. ++=-|||.+-.+
T Consensus 69 l~vG~RVVA~~~~~~------------~~~fY~GiVaE~p~~~-N~~RyLVFFDDG 111 (213)
T 3dlm_A 69 LYVGSRVVAKYKDGN------------QVWLYAGIVAETPNVK-NKLRFLIFFDDG 111 (213)
T ss_dssp CCTTCEEEEEEECSS------------CEEEEEEEEEECCCTT-TTSCEEEEETTS
T ss_pred EeEEEEEEEEecCCC------------CcceeeeEEEECCccC-CCceEEEEEeCC
Confidence 445899999986554 3589999999999985 666788887554
No 69
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=31.69 E-value=77 Score=19.81 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=13.5
Q ss_pred CcccCCceEEEEEccC
Q psy17720 2 RYCSRTARAVFQFYPE 17 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe 17 (80)
++|++||+.|+..+..
T Consensus 142 ~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 142 QYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHEEEEEEEEEEEECS
T ss_pred HHccCCCEEEEEEeCC
Confidence 5799999999988764
No 70
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=31.57 E-value=51 Score=25.14 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=18.6
Q ss_pred EEEccCChHHHHHHHHHHHHcc
Q psy17720 12 FQFYPENSAQIELVTSQAMRAG 33 (80)
Q Consensus 12 ~QfYPen~~Q~emI~~~A~kaG 33 (80)
+=++|.+.+|+..+++.|.+.|
T Consensus 55 ~vv~p~~~~~v~~~v~~a~~~~ 76 (500)
T 3tsh_A 55 YIITPTQVSHIQSAVVCGRRHS 76 (500)
T ss_dssp EEECCSSHHHHHHHHHHHHHTT
T ss_pred EEEEcCCHHHHHHHHHHHHHCC
Confidence 3468999999999999998754
No 71
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=31.52 E-value=34 Score=24.93 Aligned_cols=33 Identities=0% Similarity=-0.113 Sum_probs=22.8
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++-.+-....| .+.....+.||.-
T Consensus 159 r~LkpGG~~v~~~~~~~~~~--~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 159 QKLALGGSIAVKITEHSWNA--DLYKLMGHFSWWT 191 (290)
T ss_dssp HHEEEEEEEEEEECSSSCCH--HHHHHHTTEEEEE
T ss_pred HhcCCCcEEEEEEeccCCHH--HHHHHHHHcCCcE
Confidence 57999999999776544333 4446666778863
No 72
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=31.23 E-value=23 Score=23.60 Aligned_cols=13 Identities=0% Similarity=-0.202 Sum_probs=11.0
Q ss_pred CcccCCceEEEEE
Q psy17720 2 RYCSRTARAVFQF 14 (80)
Q Consensus 2 ~~~~rGaRAV~Qf 14 (80)
++|++||+.+++.
T Consensus 130 ~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 130 KVLKPGGTITVIE 142 (276)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEE
Confidence 5799999999874
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=31.05 E-value=21 Score=24.07 Aligned_cols=14 Identities=14% Similarity=0.171 Sum_probs=12.4
Q ss_pred CcccCCceEEEEEc
Q psy17720 2 RYCSRTARAVFQFY 15 (80)
Q Consensus 2 ~~~~rGaRAV~QfY 15 (80)
++|++||+.++.++
T Consensus 161 ~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 161 SVLRPGGVLSLMFY 174 (285)
T ss_dssp HTEEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEe
Confidence 58999999999886
No 74
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=31.04 E-value=22 Score=23.03 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=23.1
Q ss_pred CcccCCceEEEEEccCChH-------------------HHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSA-------------------QIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~-------------------Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++..+..... ..+.+.....++||.-
T Consensus 141 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 141 RVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp HHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred HHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 5789999999987422211 1134567778899964
No 75
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=31.01 E-value=86 Score=22.70 Aligned_cols=45 Identities=13% Similarity=-0.141 Sum_probs=28.3
Q ss_pred CcccCCceEEEEEccCC---hHH-HHHHHHHHHHccccc-eEEeeCCCCC
Q psy17720 2 RYCSRTARAVFQFYPEN---SAQ-IELVTSQAMRAGFYG-GLVVDYPHST 46 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen---~~Q-~emI~~~A~kaGF~G-GlvVD~P~S~ 46 (80)
++|++||..++...... .+. .++|.+++.++|+.- -..+.+|.+.
T Consensus 260 ~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~~e~~~p~~~ 309 (332)
T 2igt_A 260 EILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGELVIREAG 309 (332)
T ss_dssp HTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEEEEEEEECCC
T ss_pred HhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 67999999777765543 333 455656777788743 2234567664
No 76
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=30.88 E-value=24 Score=24.47 Aligned_cols=38 Identities=13% Similarity=0.003 Sum_probs=24.6
Q ss_pred Cccc---C--CceEEEEEccCCh---HHHHHHHHHHHHcc-ccceEE
Q psy17720 2 RYCS---R--TARAVFQFYPENS---AQIELVTSQAMRAG-FYGGLV 39 (80)
Q Consensus 2 ~~~~---r--GaRAV~QfYPen~---~Q~emI~~~A~kaG-F~GGlv 39 (80)
++|+ + ||+.++-|-|.++ ++.+.+...+.+.| |.--.+
T Consensus 188 ~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 188 MLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEE
T ss_pred HHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEe
Confidence 4577 8 9999998888653 34455667888899 875444
No 77
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=30.17 E-value=47 Score=25.81 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=18.1
Q ss_pred EEEEEccCChHHHHHHHHHHHH
Q psy17720 10 AVFQFYPENSAQIELVTSQAMR 31 (80)
Q Consensus 10 AV~QfYPen~~Q~emI~~~A~k 31 (80)
+-.=++|+|.+|+..|.+.|.+
T Consensus 62 P~~vv~P~s~eeV~~iv~~a~~ 83 (524)
T 2exr_A 62 PLAVVRPVGPEDIAGAVKAALR 83 (524)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHh
Confidence 3334699999999999999985
No 78
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=30.15 E-value=27 Score=23.59 Aligned_cols=11 Identities=18% Similarity=0.265 Sum_probs=10.3
Q ss_pred CcccCCceEEE
Q psy17720 2 RYCSRTARAVF 12 (80)
Q Consensus 2 ~~~~rGaRAV~ 12 (80)
|+||+||+.+|
T Consensus 127 r~LkpGG~l~i 137 (225)
T 3p2e_A 127 DLAKKEAHFEF 137 (225)
T ss_dssp TTEEEEEEEEE
T ss_pred HhcCCCcEEEE
Confidence 68999999999
No 79
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=30.10 E-value=41 Score=22.12 Aligned_cols=40 Identities=13% Similarity=-0.004 Sum_probs=23.9
Q ss_pred CcccCCceEEEEEccCChH--------HHHHHHHHHHHccccceEEeeC
Q psy17720 2 RYCSRTARAVFQFYPENSA--------QIELVTSQAMRAGFYGGLVVDY 42 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~--------Q~emI~~~A~kaGF~GGlvVD~ 42 (80)
++|++||+.++-+.+.... ..+.+. ....+||.-=-+++.
T Consensus 166 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 166 WFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp HHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEEC
T ss_pred HhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEcc
Confidence 4799999999986653211 113333 445679965445554
No 80
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=29.86 E-value=19 Score=22.96 Aligned_cols=14 Identities=14% Similarity=0.007 Sum_probs=11.5
Q ss_pred CcccCCceEEEEEc
Q psy17720 2 RYCSRTARAVFQFY 15 (80)
Q Consensus 2 ~~~~rGaRAV~QfY 15 (80)
++|++||+.++..+
T Consensus 129 ~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 129 RVLKPGAYLYLVEF 142 (235)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEC
Confidence 57899999999755
No 81
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=28.79 E-value=51 Score=21.50 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=28.4
Q ss_pred CcccCCceEEEEEc---cCC-hH--------------HHHHHHHHHHHccccceEEeeCCCC
Q psy17720 2 RYCSRTARAVFQFY---PEN-SA--------------QIELVTSQAMRAGFYGGLVVDYPHS 45 (80)
Q Consensus 2 ~~~~rGaRAV~QfY---Pen-~~--------------Q~emI~~~A~kaGF~GGlvVD~P~S 45 (80)
++|++||+.++... +.. .. -.+.+.+...++||.-=-+.+.|..
T Consensus 138 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 199 (257)
T 3f4k_A 138 KYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFILPEN 199 (257)
T ss_dssp TTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEECCGG
T ss_pred HHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEECChh
Confidence 68999999999862 211 11 1244567778899986555666644
No 82
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=28.18 E-value=34 Score=22.80 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=29.3
Q ss_pred CcccCCceEEEEEc---cCC-hH--------------HHHHHHHHHHHccccceEEeeCCCC
Q psy17720 2 RYCSRTARAVFQFY---PEN-SA--------------QIELVTSQAMRAGFYGGLVVDYPHS 45 (80)
Q Consensus 2 ~~~~rGaRAV~QfY---Pen-~~--------------Q~emI~~~A~kaGF~GGlvVD~P~S 45 (80)
++|++||+.+++.. +.. .. ..+.+.+...++||.-=-+.+.|..
T Consensus 138 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 199 (267)
T 3kkz_A 138 KYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFILPEN 199 (267)
T ss_dssp GGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEECCGG
T ss_pred HHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEECCHh
Confidence 68999999999853 111 11 2345667788999986556666643
No 83
>2h1t_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.80A {Pseudomonas aeruginosa} SCOP: b.178.1.1
Probab=28.05 E-value=14 Score=26.28 Aligned_cols=10 Identities=60% Similarity=1.089 Sum_probs=8.3
Q ss_pred ceEEeeCCCC
Q psy17720 36 GGLVVDYPHS 45 (80)
Q Consensus 36 GGlvVD~P~S 45 (80)
-|+|+|||.=
T Consensus 175 ~GlV~dYPgL 184 (188)
T 2h1t_A 175 QGLVIDYPGL 184 (188)
T ss_dssp TSCEEEETTT
T ss_pred CceEEcchhh
Confidence 4899999974
No 84
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=27.95 E-value=29 Score=23.72 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=25.9
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++-.- +.+|.+.+.+...++||.-
T Consensus 199 ~~LkpgG~l~i~~~--~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 199 SMMKPGSVATFYLP--NFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp HTEEEEEEEEEEES--SHHHHHHHHHHSGGGTEEE
T ss_pred HHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCeE
Confidence 57899999998764 4567788878888899964
No 85
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=27.43 E-value=87 Score=21.33 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=33.6
Q ss_pred CcccCCceEEEEEccC---ChH----------------HHHHHHHHHHHccccceEEeeCCC--CCCcceEEEEEEe
Q psy17720 2 RYCSRTARAVFQFYPE---NSA----------------QIELVTSQAMRAGFYGGLVVDYPH--STKAKKFFLVLMT 57 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe---n~~----------------Q~emI~~~A~kaGF~GGlvVD~P~--S~kaKK~yLvL~~ 57 (80)
|+|++||+.++-+.|. ..+ -.+.+.+.+..+||.---+...|. ...+-.|++.+..
T Consensus 125 rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 125 EILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp HHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEEEEEE
T ss_pred HhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHHHHhh
Confidence 6899999999964432 111 245677888999998433333343 2234555555554
No 86
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=27.14 E-value=42 Score=21.33 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=11.7
Q ss_pred CcccCCceEEEEE
Q psy17720 2 RYCSRTARAVFQF 14 (80)
Q Consensus 2 ~~~~rGaRAV~Qf 14 (80)
++|++||+.++..
T Consensus 129 ~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 129 DWLAEGGRLFLVC 141 (250)
T ss_dssp TTEEEEEEEEEEE
T ss_pred HhcCCCCEEEEEc
Confidence 6899999999987
No 87
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=27.03 E-value=18 Score=23.58 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=24.9
Q ss_pred CcccCCceEEEEEccCCh------H-------------HHHHHHHHHHHccccceEEee
Q psy17720 2 RYCSRTARAVFQFYPENS------A-------------QIELVTSQAMRAGFYGGLVVD 41 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~------~-------------Q~emI~~~A~kaGF~GGlvVD 41 (80)
++|++||+.++..+.... . -.+.+.+...++||.-=-+.+
T Consensus 147 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 147 KWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 579999999998642221 1 134455667778886433333
No 88
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=26.17 E-value=1.2e+02 Score=19.23 Aligned_cols=21 Identities=14% Similarity=-0.077 Sum_probs=13.4
Q ss_pred HHHHHHHHHHccccc-eEEeeC
Q psy17720 22 IELVTSQAMRAGFYG-GLVVDY 42 (80)
Q Consensus 22 ~emI~~~A~kaGF~G-GlvVD~ 42 (80)
.+.+.+...++||.- .+.-+|
T Consensus 205 ~~~l~~ll~~aGf~~~~~~~~~ 226 (246)
T 1y8c_A 205 EEDIEKYLKHGQLNILDKVDCY 226 (246)
T ss_dssp HHHHHHHHHHTTEEEEEEEESS
T ss_pred HHHHHHHHHHCCCeEEEEEccc
Confidence 455667778899975 344444
No 89
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=25.51 E-value=67 Score=24.22 Aligned_cols=26 Identities=8% Similarity=-0.061 Sum_probs=20.9
Q ss_pred CceEEEEEccCChHHHHHHHHHHHHc
Q psy17720 7 TARAVFQFYPENSAQIELVTSQAMRA 32 (80)
Q Consensus 7 GaRAV~QfYPen~~Q~emI~~~A~ka 32 (80)
++++.+=++|++.+|+.-+.+.|.+.
T Consensus 36 ~~~p~~vv~p~s~~dv~~~v~~a~~~ 61 (459)
T 2bvf_A 36 LQRPSLIARCLSAGDVAKSVRYACDN 61 (459)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEecCCHHHHHHHHHHHHHc
Confidence 45555667999999999999998764
No 90
>1sa3_A Type II restriction enzyme MSPI; protein-DNA complex, hydrolase/DNA complex; 1.95A {Moraxella SP} SCOP: c.52.1.23 PDB: 1yfi_A
Probab=24.74 E-value=39 Score=25.66 Aligned_cols=25 Identities=40% Similarity=0.545 Sum_probs=22.6
Q ss_pred HHHccccceEEeeCCCCCCcceEEE
Q psy17720 29 AMRAGFYGGLVVDYPHSTKAKKFFL 53 (80)
Q Consensus 29 A~kaGF~GGlvVD~P~S~kaKK~yL 53 (80)
+.|.||+-|+--.||--+|.||..+
T Consensus 236 ~~K~gfGT~fsWTYpSkkkGkkIQ~ 260 (262)
T 1sa3_A 236 ARKPGFGTGLNWTYASGSKAKKMQF 260 (262)
T ss_dssp TTCGGGGTSSEEEECCSSSSCCEEE
T ss_pred cccCCCCCCceeeccCCCCcceeec
Confidence 4689999999999999999999864
No 91
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=24.68 E-value=90 Score=20.38 Aligned_cols=37 Identities=5% Similarity=0.012 Sum_probs=28.9
Q ss_pred CCcccCCceEEEEEccCChHHHHHHHHHHHHccccceE
Q psy17720 1 MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGL 38 (80)
Q Consensus 1 ~~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGl 38 (80)
|++.+.|-.-++-+=| +++=.+-|.+.|.+.|+..|.
T Consensus 6 m~y~~~g~~~~~rL~~-Gedl~~~l~~~~~~~~i~~a~ 42 (147)
T 3hwu_A 6 GKYMKTPTGYLMVLRH-GDNVLQNLEQLARDEHIPSAS 42 (147)
T ss_dssp TSEEEETTEEEEEEET-TCBHHHHHHHHHHHTTCSEEE
T ss_pred eeeccCCCEEEEEECC-CChHHHHHHHHHHHcCCCEEE
Confidence 6778888888888776 677788899999888776543
No 92
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=23.79 E-value=1.4e+02 Score=20.89 Aligned_cols=42 Identities=24% Similarity=0.273 Sum_probs=29.9
Q ss_pred ChHHHHHHHHHHHHccccceEEeeCC--------CC-CCcceEEEEEEecC
Q psy17720 18 NSAQIELVTSQAMRAGFYGGLVVDYP--------HS-TKAKKFFLVLMTGG 59 (80)
Q Consensus 18 n~~Q~emI~~~A~kaGF~GGlvVD~P--------~S-~kaKK~yLvL~~G~ 59 (80)
++.|++.+..+|.++||.-=.+|+=| .+ ....+.+||+..|+
T Consensus 165 ~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gg 215 (394)
T 3qfu_A 165 NDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGG 215 (394)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCC
Confidence 67899999999999999754444422 11 22456788999887
No 93
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=23.65 E-value=55 Score=21.21 Aligned_cols=35 Identities=6% Similarity=-0.139 Sum_probs=22.7
Q ss_pred CcccCCceEEEEEccCCh-------------HHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENS-------------AQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~-------------~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.++....-.. ...+.+.+...++||.-
T Consensus 185 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 185 QALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp HHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred HhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEE
Confidence 578999999997631100 02355666777899975
No 94
>3n1g_B Desert hedgehog protein; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence, fibronectins; 1.90A {Homo sapiens} SCOP: d.65.1.2 PDB: 3n1q_B
Probab=23.64 E-value=85 Score=22.02 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=22.7
Q ss_pred ceEE-EEEccCChHHHHHHHHHHHHccccceEEeeCCCC
Q psy17720 8 ARAV-FQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHS 45 (80)
Q Consensus 8 aRAV-~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S 45 (80)
|||| +-..-.+..+..+|..+|..+||.| | =||.|
T Consensus 125 GrAaDI~~~~~~~~k~~~La~~A~~~gfd~-V--~Y~~~ 160 (170)
T 3n1g_B 125 GRALDITTSDRDRNKYGLLARLAVEAGFDW-V--YYESR 160 (170)
T ss_dssp TCEEEEEETTCCGGGHHHHHHHHHHTTCSE-E--ECCCS
T ss_pred eEEEEEEeCCccHHHHHHHHHHHHHCCCCE-E--EeCCC
Confidence 4555 3332234556778889999999865 3 47765
No 95
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=23.63 E-value=33 Score=23.72 Aligned_cols=42 Identities=14% Similarity=-0.036 Sum_probs=28.5
Q ss_pred CcccCCceEEEEEccCChH--------------------HHHHHHHHHHHccccceEEeeCC
Q psy17720 2 RYCSRTARAVFQFYPENSA--------------------QIELVTSQAMRAGFYGGLVVDYP 43 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~--------------------Q~emI~~~A~kaGF~GGlvVD~P 43 (80)
++|++||+.++.-....+. -.+.+.+...++||.-=-+.+++
T Consensus 209 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 209 RFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred HHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 5799999999876432221 13456677788999876666664
No 96
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=23.04 E-value=28 Score=23.53 Aligned_cols=41 Identities=12% Similarity=-0.003 Sum_probs=24.9
Q ss_pred CcccCCceEEEEEccCC----hH---------------HHHHHHHHHHHccccceEEeeC
Q psy17720 2 RYCSRTARAVFQFYPEN----SA---------------QIELVTSQAMRAGFYGGLVVDY 42 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen----~~---------------Q~emI~~~A~kaGF~GGlvVD~ 42 (80)
++|++||+.+++..-.. .. -.+.+.+.+.++||.-=-+.+.
T Consensus 175 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 175 RVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 57999999999853211 00 1234556777889974334443
No 97
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=22.65 E-value=90 Score=19.90 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=21.6
Q ss_pred CcccCCceEEEEEccC----------------------ChHHH-HHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPE----------------------NSAQI-ELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe----------------------n~~Q~-emI~~~A~kaGF~G 36 (80)
++|++||..++--..+ +.++. +.+...+.++||.-
T Consensus 129 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 129 EFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV 186 (217)
T ss_dssp TTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE
T ss_pred HHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE
Confidence 6799999666543321 33333 34557888889853
No 98
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=22.50 E-value=30 Score=20.87 Aligned_cols=19 Identities=11% Similarity=-0.094 Sum_probs=15.6
Q ss_pred CcccCCceEEEEEccCChH
Q psy17720 2 RYCSRTARAVFQFYPENSA 20 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~ 20 (80)
++|++||+.++...+...-
T Consensus 135 ~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 135 GLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp TCEEEEEEEEEEEETTSCC
T ss_pred cccCCCcEEEEEeCCccCC
Confidence 6899999999999886543
No 99
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=22.34 E-value=50 Score=23.89 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=24.5
Q ss_pred CcccCCceEEEEE-ccCCh-------------------HHHHHHHHHHHHccccce
Q psy17720 2 RYCSRTARAVFQF-YPENS-------------------AQIELVTSQAMRAGFYGG 37 (80)
Q Consensus 2 ~~~~rGaRAV~Qf-YPen~-------------------~Q~emI~~~A~kaGF~GG 37 (80)
++|++||+.++.. ++... -..+.+.+...++||.--
T Consensus 191 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 246 (383)
T 4fsd_A 191 RVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDV 246 (383)
T ss_dssp HHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCE
T ss_pred HHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceE
Confidence 5799999999974 33221 112556777889999754
No 100
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=21.92 E-value=55 Score=21.97 Aligned_cols=16 Identities=19% Similarity=0.104 Sum_probs=13.5
Q ss_pred CcccCCceEEEEEccC
Q psy17720 2 RYCSRTARAVFQFYPE 17 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPe 17 (80)
++|++||+.++++...
T Consensus 142 ~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 142 QALKSGGRFVAEFGGK 157 (279)
T ss_dssp HHEEEEEEEEEEEECT
T ss_pred HhcCCCcEEEEEecCC
Confidence 5799999999988754
No 101
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=21.81 E-value=43 Score=21.60 Aligned_cols=13 Identities=0% Similarity=-0.235 Sum_probs=10.9
Q ss_pred CcccCCceEEEEE
Q psy17720 2 RYCSRTARAVFQF 14 (80)
Q Consensus 2 ~~~~rGaRAV~Qf 14 (80)
++|++||+.++..
T Consensus 136 ~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 136 SILKESGIFINAD 148 (234)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 5799999999864
No 102
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=21.50 E-value=11 Score=24.84 Aligned_cols=32 Identities=9% Similarity=0.106 Sum_probs=20.4
Q ss_pred CcccCCceEEEEEccCChHHHHHHHHHHHHccccc
Q psy17720 2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYG 36 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~G 36 (80)
++|++||+.+. +......+.+.+...++||.-
T Consensus 130 ~~LkpgG~l~~---~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 130 ELAAPDAHFLY---VGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp HHEEEEEEEEE---EESSSCCTHHHHHHHHTTCEE
T ss_pred HHcCCCcEEEE---eCCcCCHHHHHHHHHHCCCeE
Confidence 57899999882 222222344667777889864
No 103
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=21.01 E-value=91 Score=20.23 Aligned_cols=40 Identities=5% Similarity=-0.102 Sum_probs=24.9
Q ss_pred CcccCCceEEEEE--ccCCh--H---------------HHHHHHHHHHHccccceEEee
Q psy17720 2 RYCSRTARAVFQF--YPENS--A---------------QIELVTSQAMRAGFYGGLVVD 41 (80)
Q Consensus 2 ~~~~rGaRAV~Qf--YPen~--~---------------Q~emI~~~A~kaGF~GGlvVD 41 (80)
++|++||+.++.. ++..+ . -.+.+.+...++||.-=-++.
T Consensus 128 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 128 QSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp TSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred HHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 7899999999963 21111 1 124566777889997533333
No 104
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=21.01 E-value=1.2e+02 Score=21.05 Aligned_cols=42 Identities=14% Similarity=0.239 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHHccccceEEeeCCC--------CCCcceEEEEEEecC
Q psy17720 18 NSAQIELVTSQAMRAGFYGGLVVDYPH--------STKAKKFFLVLMTGG 59 (80)
Q Consensus 18 n~~Q~emI~~~A~kaGF~GGlvVD~P~--------S~kaKK~yLvL~~G~ 59 (80)
++.|++.+.++|.++||.-=.+++-|- ..+..+..||+..|+
T Consensus 107 ~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGg 156 (344)
T 1jce_A 107 TDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGG 156 (344)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCC
Confidence 478899999999999997544444331 112345678888886
No 105
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=20.43 E-value=91 Score=21.72 Aligned_cols=26 Identities=31% Similarity=0.401 Sum_probs=17.1
Q ss_pred cccceEEeeC---------------CCCCCcceEEEEEEec
Q psy17720 33 GFYGGLVVDY---------------PHSTKAKKFFLVLMTG 58 (80)
Q Consensus 33 GF~GGlvVD~---------------P~S~kaKK~yLvL~~G 58 (80)
|++||+++.- |.+...+|-|||..+-
T Consensus 1 ~~~~~~~~~~~~~~~~~F~~~F~n~~~~~~r~~tyLcy~v~ 41 (190)
T 2nyt_A 1 GSGGGMIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVE 41 (190)
T ss_pred CCCCceEEECCccChhHHHhcCCCCCcCCCCCceEEEEEEE
Confidence 6778887742 2224567889998754
No 106
>2e7v_A Transmembrane protease; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.92A {Mus musculus}
Probab=20.11 E-value=56 Score=21.41 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=19.3
Q ss_pred EEEEcc-CChH----HHHHHHHHHHHccccceEEeeCCCC
Q psy17720 11 VFQFYP-ENSA----QIELVTSQAMRAGFYGGLVVDYPHS 45 (80)
Q Consensus 11 V~QfYP-en~~----Q~emI~~~A~kaGF~GGlvVD~P~S 45 (80)
+|||-+ ++.+ .++-|..+ ++..=+ +-|| |.|
T Consensus 76 ~F~~p~t~~~~~~~~~i~~iL~q-L~~~~~--l~id-~sS 111 (121)
T 2e7v_A 76 KFRSSKRNNRKVMKTRIQSVLRR-LSSSGN--LEIA-PSN 111 (121)
T ss_dssp EEEC----CHHHHHHHHHHHHGG-GCSSSS--SEEC-SSC
T ss_pred EEecCCcCChHHHHHHHHHHHHH-HhhCCC--CccC-Ccc
Confidence 688877 4656 66667666 665543 8888 777
No 107
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=20.08 E-value=50 Score=24.54 Aligned_cols=62 Identities=16% Similarity=0.036 Sum_probs=35.4
Q ss_pred CcccCCceEEEEEccCCh-HHHHHHHHHHHHccccceEEeeCCCCCCcce-EEEEEEecCCCCCCC
Q psy17720 2 RYCSRTARAVFQFYPENS-AQIELVTSQAMRAGFYGGLVVDYPHSTKAKK-FFLVLMTGGDLPLPP 65 (80)
Q Consensus 2 ~~~~rGaRAV~QfYPen~-~Q~emI~~~A~kaGF~GGlvVD~P~S~kaKK-~yLvL~~G~~~~lp~ 65 (80)
++|++||.-|+|.....+ .....+ -+.++.-|..-.++..|...+.+. -..|+.+. ...+|.
T Consensus 188 r~LkpgGvlv~~~~~~~~~~~~~~~-~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As-~~plp~ 251 (317)
T 3gjy_A 188 RGLAPGGLYVANCGDHSDLRGAKSE-LAGMMEVFEHVAVIADPPMLKGRRYGNIILMGS-DTEFFS 251 (317)
T ss_dssp HHEEEEEEEEEEEEECTTCHHHHHH-HHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEE-SSCCCC
T ss_pred HhcCCCcEEEEEecCCcchHHHHHH-HHHHHHHCCceEEEEecCCCCCCcCceEEEEEE-CCCCCc
Confidence 579999999999974332 223333 345555687766666654333332 24455543 344443
Done!