BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17721
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55DA6|WBS22_DICDI Probable methyltransferase WBSCR22 homolog OS=Dictyostelium
discoideum GN=DDB_G0269722 PE=3 SV=1
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 55/69 (79%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
LF L+R +A+ QFYPENSAQIE++T+ A+R GF GGL++D+P+S+KAKK+FLVL TG
Sbjct: 146 LFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGN 205
Query: 84 DLPLPPALG 92
+ +P A G
Sbjct: 206 NNIMPSAKG 214
>sp|Q58DP0|WBS22_BOVIN Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22
PE=2 SV=1
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
L++ L R RAV Q YPENS Q+EL+T+QA RAGF GG+VVDYP+S KAKKF+L L +G
Sbjct: 149 LYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP 208
Query: 84 DLPLPPALGEGEGSQSP 100
LP L E + P
Sbjct: 209 STSLPEGLSEDTEEEKP 225
>sp|Q9CY21|WBS22_MOUSE Uncharacterized methyltransferase WBSCR22 OS=Mus musculus
GN=Wbscr22 PE=2 SV=1
Length = 281
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
L++ L R ARAV Q YPENS Q+EL+T+QA RAGF GG+VVD+P+S KAKKF+L L +G
Sbjct: 149 LYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP 208
Query: 84 DLPLPPALGEGE 95
LP L E +
Sbjct: 209 STSLPKGLTESQ 220
>sp|O43709|WBS22_HUMAN Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens
GN=WBSCR22 PE=1 SV=2
Length = 281
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
LF+ L R +RAV Q YPENS Q+EL+T+QA +AGF GG+VVDYP+S KAKKF+L L +G
Sbjct: 149 LFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGP 208
Query: 84 DLPLPPALGEGEGSQSP 100
+P L E + P
Sbjct: 209 STFIPEGLSENQDEVEP 225
>sp|Q10162|YAU6_SCHPO Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26A3.06 PE=4 SV=1
Length = 268
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
L+ + R RAV Q+YPE +++ A +AGF GG+VVD+P S + KK++LVL GG
Sbjct: 144 LYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAGG 203
Query: 84 DLPL 87
L
Sbjct: 204 TRTL 207
>sp|P25627|BUD23_YEAST Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BUD23 PE=1 SV=1
Length = 275
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTG 82
L+ L + + V QFYP+N Q++ + A AGF GGLVVD P S K KK++LVL +G
Sbjct: 144 LYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSG 202
>sp|Q18ER3|DP2L_HALWD DNA polymerase II large subunit OS=Haloquadratum walsbyi (strain DSM
16790) GN=polC PE=3 SV=1
Length = 2289
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 37 QFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDL 85
Q P+ Q E V+ + +++ G VD P +AK+ L L+T GDL
Sbjct: 1983 QVIPDTVVQQETVSLETLQSLLTGLSTVDLPAQLEAKRDELTLLTEGDL 2031
>sp|O28190|Y2089_ARCFU Uncharacterized protein AF_2089 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2089 PE=4 SV=1
Length = 313
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 31 TARAVFQFYPEN--SAQIELVTSQAMRAGF------YGGLVVDYPHSTKAKKFFL 77
RA + Y N + QI + + +G +GGLVVD HSTK KK FL
Sbjct: 98 VGRAFSELYGLNLTTRQIAEIMGRGGTSGIGVAVFDHGGLVVDGGHSTKEKKSFL 152
>sp|Q7QJW7|CLP1_ANOGA Protein CLP1 homolog OS=Anopheles gambiae GN=cbc PE=3 SV=2
Length = 423
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 23 RLFTRLSRTARAVFQ--FYPENSAQIELVTSQA-------MRAGFYGGLVVDYPHSTKAK 73
RL+ L R + Q F P++ +E SQ +R FYG + +PHS K
Sbjct: 259 RLYNELLRDVKGTVQVVFLPKSGGVVERTKSQRTEARDQRIREYFYGSKMPLFPHSFDVK 318
Query: 74 KFFLVLMTGGDLPLP 88
+ + G PLP
Sbjct: 319 FSDIKIFKVGSPPLP 333
>sp|Q28CH2|CPEB3_XENTR Cytoplasmic polyadenylation element-binding protein 3 OS=Xenopus
tropicalis GN=cpeb3 PE=2 SV=1
Length = 632
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 16 LKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKF 75
L +H + R+ R +R VF + +T+ R +G LVVD+PH ++K +
Sbjct: 358 LSSPTHCQNGERIERYSRKVFVGGLPPDIDEDEITASFRR---FGPLVVDWPHKAESKSY 414
Query: 76 F 76
F
Sbjct: 415 F 415
>sp|Q82HL2|HUTU_STRAW Urocanate hydratase OS=Streptomyces avermitilis (strain ATCC 31267
/ DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=hutU PE=3 SV=1
Length = 554
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 28 LSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLV----VDYPHSTKAKKFFLVLMTGG 83
+++T +A+ + +PEN + + R F G + Y KA + F ++ G
Sbjct: 367 IAKTDKALLELFPENESLHRWIKMAGERVHFQGLPARICWLGYGERDKAGERFNDMVASG 426
Query: 84 DLPLPPALGEGE---GS-QSPWDKPREMY-GSAAIQDF 116
+L P A+G GS SP+ + M GS AI D+
Sbjct: 427 ELQAPLAIGRDHLDCGSVASPYRETEAMLDGSDAIADW 464
>sp|Q9KZ75|HUTU_STRCO Urocanate hydratase OS=Streptomyces coelicolor (strain ATCC BAA-471
/ A3(2) / M145) GN=hutU PE=3 SV=1
Length = 572
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 28 LSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLV----VDYPHSTKAKKFFLVLMTGG 83
+++T +A+ +PEN + + R F G + Y KA + F ++ G
Sbjct: 367 IAKTDKAILDLFPENESLARWIKMAGERVHFQGLPARICWLGYGERDKAGERFNDMVASG 426
Query: 84 DLPLPPALGEGE---GS-QSPWDKPREMY-GSAAIQDF 116
+L P +G GS SP+ + M GS AI D+
Sbjct: 427 ELAAPIVIGRDHLDCGSVASPYRETEAMLDGSDAIADW 464
>sp|B1VUR5|HUTU_STRGG Urocanate hydratase OS=Streptomyces griseus subsp. griseus (strain
JCM 4626 / NBRC 13350) GN=hutU PE=3 SV=1
Length = 552
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 28 LSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLV----VDYPHSTKAKKFFLVLMTGG 83
+ +T +A+ + +PEN + + R F G + Y KA + F ++ G
Sbjct: 367 IHKTDKAMLELFPENESLHRWIRMAGERVHFQGLPARICWLGYGERDKAGERFNDMVASG 426
Query: 84 DLPLPPALGEGE---GS-QSPWDKPREMY-GSAAIQDF 116
+L P A+G GS SP+ + M GS AI D+
Sbjct: 427 ELAAPLAIGRDHLDCGSVASPYRETEAMLDGSDAIADW 464
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,640,079
Number of Sequences: 539616
Number of extensions: 1776218
Number of successful extensions: 3477
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3469
Number of HSP's gapped (non-prelim): 14
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)