Query psy17723
Match_columns 145
No_of_seqs 163 out of 1626
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:21:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.9 4.9E-28 1.7E-32 167.9 7.7 99 35-136 5-105 (111)
2 2kwj_A Zinc finger protein DPF 99.9 1.2E-28 4.1E-33 172.0 2.0 103 37-139 1-112 (114)
3 3v43_A Histone acetyltransfera 99.9 8.4E-28 2.9E-32 167.1 2.8 101 35-135 3-112 (112)
4 4gne_A Histone-lysine N-methyl 99.7 9.8E-18 3.3E-22 115.3 5.8 85 32-129 10-98 (107)
5 3asl_A E3 ubiquitin-protein li 99.7 1.8E-17 6E-22 106.0 4.0 56 79-135 11-69 (70)
6 2e6s_A E3 ubiquitin-protein li 99.6 1.1E-16 3.7E-21 104.1 5.0 54 80-134 20-76 (77)
7 3shb_A E3 ubiquitin-protein li 99.6 1.3E-16 4.5E-21 103.6 3.9 54 80-134 20-76 (77)
8 2e6r_A Jumonji/ARID domain-con 99.6 3.9E-16 1.3E-20 104.6 2.6 60 79-138 8-69 (92)
9 1f62_A Transcription factor WS 99.5 2.9E-15 9.9E-20 89.8 2.8 46 89-134 2-49 (51)
10 2jmi_A Protein YNG1, ING1 homo 99.5 7.3E-15 2.5E-19 97.9 2.3 54 89-144 28-85 (90)
11 2k16_A Transcription initiatio 99.5 9.5E-15 3.3E-19 94.2 2.0 53 89-141 20-74 (75)
12 2ku3_A Bromodomain-containing 99.5 1E-14 3.5E-19 93.3 1.4 50 89-138 18-69 (71)
13 1mm2_A MI2-beta; PHD, zinc fin 99.4 4.4E-14 1.5E-18 87.8 3.7 47 89-138 11-59 (61)
14 3ask_A E3 ubiquitin-protein li 99.4 5.1E-14 1.7E-18 107.9 4.2 56 79-135 167-225 (226)
15 2lri_C Autoimmune regulator; Z 99.4 4.3E-14 1.5E-18 89.2 2.6 46 89-137 14-61 (66)
16 1xwh_A Autoimmune regulator; P 99.4 4.9E-14 1.7E-18 88.8 2.0 48 89-139 10-59 (66)
17 2puy_A PHD finger protein 21A; 99.4 6.7E-14 2.3E-18 86.6 2.4 48 89-139 7-56 (60)
18 1wen_A Inhibitor of growth fam 99.4 1.4E-13 4.6E-18 88.1 3.4 49 89-139 18-69 (71)
19 1x4i_A Inhibitor of growth pro 99.4 6.7E-14 2.3E-18 89.3 1.5 54 89-144 8-64 (70)
20 1wev_A Riken cDNA 1110020M19; 99.4 9E-14 3.1E-18 92.4 1.9 55 88-142 17-79 (88)
21 2yt5_A Metal-response element- 99.4 6.2E-14 2.1E-18 88.2 0.9 52 89-140 8-66 (66)
22 2l5u_A Chromodomain-helicase-D 99.4 2.9E-13 9.8E-18 84.1 3.9 45 88-135 12-58 (61)
23 1fp0_A KAP-1 corepressor; PHD 99.4 5.1E-13 1.7E-17 88.5 4.8 55 79-136 17-73 (88)
24 2l43_A N-teminal domain from h 99.4 6.9E-14 2.4E-18 92.9 0.3 49 89-137 27-77 (88)
25 2yql_A PHD finger protein 21A; 99.4 2.4E-13 8.1E-18 83.0 2.6 43 89-134 11-55 (56)
26 1weu_A Inhibitor of growth fam 99.3 8.8E-13 3E-17 88.0 3.6 49 89-139 38-89 (91)
27 2vnf_A ING 4, P29ING4, inhibit 99.3 8.6E-13 2.9E-17 81.7 1.8 45 89-135 12-59 (60)
28 3c6w_A P28ING5, inhibitor of g 99.3 1.2E-12 4.1E-17 80.8 1.9 45 89-135 11-58 (59)
29 2g6q_A Inhibitor of growth pro 99.3 1.2E-12 4.1E-17 81.5 1.8 45 89-135 13-60 (62)
30 1mm2_A MI2-beta; PHD, zinc fin 99.2 7.4E-12 2.5E-16 77.6 5.0 47 35-87 7-53 (61)
31 2yql_A PHD finger protein 21A; 99.2 4.5E-12 1.6E-16 77.2 4.0 49 34-88 6-54 (56)
32 1f62_A Transcription factor WS 99.2 3.3E-12 1.1E-16 76.3 2.8 47 39-88 2-48 (51)
33 1xwh_A Autoimmune regulator; P 99.2 6.6E-12 2.2E-16 79.0 3.5 48 35-88 6-53 (66)
34 1fp0_A KAP-1 corepressor; PHD 99.2 2.7E-11 9.2E-16 80.2 6.2 53 34-92 22-74 (88)
35 2e6r_A Jumonji/ARID domain-con 99.2 1.1E-11 3.7E-16 82.9 4.0 53 33-88 12-64 (92)
36 2lv9_A Histone-lysine N-methyl 99.2 7E-12 2.4E-16 84.7 3.1 47 88-136 29-77 (98)
37 2lri_C Autoimmune regulator; Z 99.2 8.3E-12 2.8E-16 78.6 3.2 46 36-87 11-56 (66)
38 2puy_A PHD finger protein 21A; 99.2 8.7E-12 3E-16 77.0 3.1 47 35-87 3-49 (60)
39 2l5u_A Chromodomain-helicase-D 99.2 1.1E-11 3.6E-16 76.9 2.6 49 34-88 8-56 (61)
40 4gne_A Histone-lysine N-methyl 99.2 1.3E-11 4.5E-16 84.6 3.1 43 89-134 17-61 (107)
41 2e6s_A E3 ubiquitin-protein li 99.1 4.4E-11 1.5E-15 77.4 4.7 49 37-88 26-75 (77)
42 3o36_A Transcription intermedi 99.1 4.2E-11 1.4E-15 89.0 3.7 46 89-137 6-53 (184)
43 3asl_A E3 ubiquitin-protein li 99.1 5E-11 1.7E-15 75.8 3.3 47 39-88 20-67 (70)
44 2ku3_A Bromodomain-containing 99.1 2.8E-11 9.6E-16 77.2 1.7 50 33-87 12-63 (71)
45 3u5n_A E3 ubiquitin-protein li 99.1 3.9E-11 1.3E-15 90.8 2.8 46 89-137 9-56 (207)
46 2yt5_A Metal-response element- 99.1 2.3E-11 7.7E-16 76.3 1.0 54 35-88 4-59 (66)
47 2l43_A N-teminal domain from h 99.1 3.5E-11 1.2E-15 79.8 2.0 49 34-87 22-72 (88)
48 2ysm_A Myeloid/lymphoid or mix 99.1 8E-11 2.7E-15 80.9 3.5 55 38-95 55-109 (111)
49 3kqi_A GRC5, PHD finger protei 99.0 2.6E-11 8.9E-16 78.0 0.7 48 89-137 12-63 (75)
50 2ro1_A Transcription intermedi 99.0 1E-10 3.4E-15 87.6 3.6 45 89-136 4-50 (189)
51 3shb_A E3 ubiquitin-protein li 99.0 1.6E-10 5.5E-15 74.8 3.5 47 39-88 28-75 (77)
52 3o36_A Transcription intermedi 99.0 2.3E-10 7.8E-15 85.0 4.4 48 35-88 2-49 (184)
53 1wev_A Riken cDNA 1110020M19; 99.0 1.5E-10 5.2E-15 76.7 2.7 54 35-88 14-70 (88)
54 1wep_A PHF8; structural genomi 99.0 6.3E-11 2.2E-15 76.9 0.3 48 89-137 14-65 (79)
55 1we9_A PHD finger family prote 98.9 2.6E-10 9E-15 71.0 2.3 49 89-137 8-60 (64)
56 3u5n_A E3 ubiquitin-protein li 98.9 4.3E-10 1.5E-14 85.0 3.6 48 35-88 5-52 (207)
57 2xb1_A Pygopus homolog 2, B-ce 98.9 1.6E-10 5.4E-15 79.0 1.0 50 89-138 5-64 (105)
58 1wew_A DNA-binding family prot 98.9 2E-10 6.9E-15 74.4 1.2 49 89-138 18-75 (78)
59 3o70_A PHD finger protein 13; 98.9 3.9E-10 1.3E-14 71.3 2.4 46 89-135 21-67 (68)
60 2k16_A Transcription initiatio 98.9 3.6E-10 1.2E-14 72.5 2.3 51 35-88 16-66 (75)
61 2kwj_A Zinc finger protein DPF 98.9 8.4E-10 2.9E-14 76.3 3.3 47 39-88 60-106 (114)
62 1wem_A Death associated transc 98.9 1.4E-10 4.7E-15 74.7 -0.8 48 89-137 18-72 (76)
63 3o7a_A PHD finger protein 13 v 98.9 5.5E-10 1.9E-14 66.9 1.7 45 89-134 6-51 (52)
64 2lbm_A Transcriptional regulat 98.9 8.6E-10 2.9E-14 79.0 2.7 45 89-136 65-118 (142)
65 2ro1_A Transcription intermedi 98.9 1.5E-09 5.1E-14 81.1 4.1 46 37-88 2-47 (189)
66 2rsd_A E3 SUMO-protein ligase 98.8 7.6E-10 2.6E-14 69.8 1.9 46 89-135 12-65 (68)
67 3v43_A Histone acetyltransfera 98.8 2.5E-09 8.4E-14 73.7 4.5 48 38-88 62-110 (112)
68 3ask_A E3 ubiquitin-protein li 98.8 2E-09 6.8E-14 82.4 4.3 49 37-88 174-223 (226)
69 2vpb_A Hpygo1, pygopus homolog 98.8 3.5E-10 1.2E-14 70.9 0.1 46 89-134 10-65 (65)
70 4bbq_A Lysine-specific demethy 98.8 1.1E-09 3.7E-14 75.7 2.0 93 38-137 8-116 (117)
71 1wee_A PHD finger family prote 98.8 1.3E-09 4.4E-14 69.5 1.8 47 89-136 18-67 (72)
72 2kgg_A Histone demethylase jar 98.8 1.4E-09 4.9E-14 65.1 0.9 44 90-133 5-52 (52)
73 1weu_A Inhibitor of growth fam 98.7 4E-08 1.4E-12 65.3 7.7 46 36-88 35-83 (91)
74 1wen_A Inhibitor of growth fam 98.7 3.7E-08 1.3E-12 62.6 5.9 46 36-88 15-63 (71)
75 2lv9_A Histone-lysine N-methyl 98.7 2.9E-08 1E-12 66.8 5.4 46 38-88 29-74 (98)
76 2ri7_A Nucleosome-remodeling f 98.6 3.2E-09 1.1E-13 77.9 -0.8 48 89-137 10-61 (174)
77 2jmi_A Protein YNG1, ING1 homo 98.5 6.4E-08 2.2E-12 64.2 3.1 46 36-88 25-74 (90)
78 2vnf_A ING 4, P29ING4, inhibit 98.5 3.1E-08 1.1E-12 60.9 1.5 45 37-88 10-57 (60)
79 3o70_A PHD finger protein 13; 98.5 1.3E-07 4.6E-12 59.5 4.0 48 35-87 17-64 (68)
80 3c6w_A P28ING5, inhibitor of g 98.5 3.9E-08 1.3E-12 60.3 1.5 45 37-88 9-56 (59)
81 3ql9_A Transcriptional regulat 98.4 1.5E-08 5E-13 71.5 -1.1 86 37-137 8-113 (129)
82 2lbm_A Transcriptional regulat 98.4 1.2E-08 4.2E-13 73.0 -1.5 51 34-87 60-114 (142)
83 2g6q_A Inhibitor of growth pro 98.4 6.3E-08 2.1E-12 60.0 1.5 45 37-88 11-58 (62)
84 1we9_A PHD finger family prote 98.4 1.6E-07 5.5E-12 58.1 3.0 51 36-88 5-56 (64)
85 3kv5_D JMJC domain-containing 98.4 3.2E-08 1.1E-12 83.4 -0.9 48 89-137 39-90 (488)
86 3lqh_A Histone-lysine N-methyl 98.3 1.3E-07 4.5E-12 70.3 0.5 49 89-137 4-65 (183)
87 3kv4_A PHD finger protein 8; e 98.2 5.2E-08 1.8E-12 81.4 -2.9 50 89-139 7-60 (447)
88 1wee_A PHD finger family prote 98.2 1.4E-06 4.9E-11 55.1 4.2 48 37-88 16-64 (72)
89 2rsd_A E3 SUMO-protein ligase 98.2 1.2E-06 4.2E-11 54.9 3.5 51 37-88 10-63 (68)
90 2vpb_A Hpygo1, pygopus homolog 98.2 5.5E-08 1.9E-12 60.8 -2.9 53 36-88 7-64 (65)
91 1wew_A DNA-binding family prot 98.1 1.5E-06 5.2E-11 55.9 3.4 51 36-88 15-70 (78)
92 3o7a_A PHD finger protein 13 v 98.1 1.2E-06 4E-11 52.2 2.6 43 42-88 8-50 (52)
93 1wem_A Death associated transc 98.1 1.7E-07 5.9E-12 60.0 -1.1 51 36-87 15-67 (76)
94 2kgg_A Histone demethylase jar 98.1 9.7E-07 3.3E-11 52.6 1.4 47 39-88 4-52 (52)
95 3ql9_A Transcriptional regulat 98.1 1.6E-07 5.6E-12 66.1 -2.5 51 34-87 54-108 (129)
96 1x4i_A Inhibitor of growth pro 98.0 1.2E-06 4.2E-11 55.3 1.5 45 37-88 6-53 (70)
97 2xb1_A Pygopus homolog 2, B-ce 98.0 4E-07 1.4E-11 62.0 -1.1 52 37-88 3-59 (105)
98 3pur_A Lysine-specific demethy 98.0 1.4E-06 4.9E-11 73.7 1.4 41 97-137 53-96 (528)
99 1wil_A KIAA1045 protein; ring 97.9 2.8E-06 9.6E-11 55.2 1.9 54 33-87 11-73 (89)
100 1wep_A PHF8; structural genomi 97.9 3.7E-06 1.3E-10 54.1 1.4 48 37-87 12-60 (79)
101 2ri7_A Nucleosome-remodeling f 97.8 1.7E-06 5.7E-11 63.3 -1.2 50 36-88 7-57 (174)
102 3kqi_A GRC5, PHD finger protei 97.8 5.6E-06 1.9E-10 52.8 1.3 47 38-87 11-58 (75)
103 1wil_A KIAA1045 protein; ring 97.5 3.5E-05 1.2E-09 50.0 2.2 44 89-133 17-74 (89)
104 3lqh_A Histone-lysine N-methyl 97.4 1.5E-05 5.2E-10 59.1 -0.8 52 37-88 2-61 (183)
105 3kv5_D JMJC domain-containing 97.0 8.8E-05 3E-09 62.5 -0.4 49 37-88 37-86 (488)
106 4ap4_A E3 ubiquitin ligase RNF 96.8 3.7E-05 1.2E-09 52.7 -3.5 92 36-138 6-125 (133)
107 3pur_A Lysine-specific demethy 96.8 0.00053 1.8E-08 58.1 2.5 37 50-88 56-92 (528)
108 4bbq_A Lysine-specific demethy 96.6 0.00074 2.5E-08 46.0 1.7 39 50-88 73-112 (117)
109 3a1b_A DNA (cytosine-5)-methyl 96.3 0.00039 1.3E-08 50.3 -1.3 86 36-136 35-135 (159)
110 3rsn_A SET1/ASH2 histone methy 96.2 0.0027 9.2E-08 46.7 2.9 46 89-135 7-59 (177)
111 3kv4_A PHD finger protein 8; e 95.6 0.00081 2.8E-08 56.1 -2.4 48 39-88 6-54 (447)
112 2ect_A Ring finger protein 126 95.6 0.009 3.1E-07 37.1 3.0 39 33-71 11-49 (78)
113 2d8s_A Cellular modulator of i 95.3 0.0037 1.3E-07 40.0 0.4 36 35-72 13-54 (80)
114 1iym_A EL5; ring-H2 finger, ub 95.3 0.0069 2.4E-07 35.0 1.6 37 35-71 3-40 (55)
115 3rsn_A SET1/ASH2 histone methy 95.2 0.012 4.1E-07 43.2 3.0 44 42-85 9-54 (177)
116 2pv0_B DNA (cytosine-5)-methyl 94.9 0.0081 2.8E-07 49.1 1.5 86 36-136 49-149 (386)
117 2ku7_A MLL1 PHD3-CYP33 RRM chi 94.5 0.0021 7.1E-08 44.0 -2.6 37 51-87 1-41 (140)
118 2ep4_A Ring finger protein 24; 94.3 0.0055 1.9E-07 37.7 -0.7 39 33-71 11-49 (74)
119 2kiz_A E3 ubiquitin-protein li 94.1 0.0079 2.7E-07 36.5 -0.2 37 35-71 12-48 (69)
120 2l0b_A E3 ubiquitin-protein li 93.8 0.0069 2.4E-07 39.2 -0.9 37 35-71 38-74 (91)
121 2egp_A Tripartite motif-contai 93.8 0.065 2.2E-06 32.9 3.6 52 33-87 8-59 (79)
122 2ecj_A Tripartite motif-contai 93.5 0.033 1.1E-06 32.2 1.9 48 33-87 11-58 (58)
123 1x4j_A Ring finger protein 38; 93.4 0.0057 1.9E-07 37.9 -1.9 37 35-71 21-57 (75)
124 2ct0_A Non-SMC element 1 homol 93.1 0.046 1.6E-06 34.4 2.0 35 36-72 14-48 (74)
125 2d8t_A Dactylidin, ring finger 92.9 0.028 9.5E-07 34.3 0.8 34 35-71 13-46 (71)
126 2ecl_A Ring-box protein 2; RNF 92.9 0.039 1.3E-06 34.8 1.5 37 36-72 14-62 (81)
127 2d8s_A Cellular modulator of i 92.8 0.027 9.3E-07 35.8 0.7 48 89-138 17-70 (80)
128 1iym_A EL5; ring-H2 finger, ub 92.4 0.092 3.1E-06 30.0 2.6 43 89-135 7-52 (55)
129 2ct0_A Non-SMC element 1 homol 92.0 0.091 3.1E-06 33.0 2.4 43 89-135 17-61 (74)
130 2ysl_A Tripartite motif-contai 91.8 0.048 1.6E-06 33.1 0.9 37 33-72 16-52 (73)
131 2ysj_A Tripartite motif-contai 91.5 0.035 1.2E-06 32.9 0.0 48 33-87 16-63 (63)
132 1x4j_A Ring finger protein 38; 91.2 0.038 1.3E-06 34.0 -0.0 44 89-136 25-70 (75)
133 2ea6_A Ring finger protein 4; 91.1 0.017 5.9E-07 34.6 -1.7 39 33-71 11-53 (69)
134 3a1b_A DNA (cytosine-5)-methyl 91.0 0.027 9.1E-07 40.7 -1.1 50 35-87 77-131 (159)
135 2ecy_A TNF receptor-associated 90.9 0.048 1.6E-06 32.6 0.2 35 34-71 12-46 (66)
136 2ecm_A Ring finger and CHY zin 90.8 0.034 1.2E-06 31.9 -0.5 36 36-71 4-40 (55)
137 2ecm_A Ring finger and CHY zin 90.8 0.078 2.7E-06 30.2 1.1 43 89-135 7-52 (55)
138 2ecl_A Ring-box protein 2; RNF 90.6 0.049 1.7E-06 34.3 0.1 45 89-137 28-75 (81)
139 2ect_A Ring finger protein 126 90.6 0.17 5.7E-06 31.1 2.6 45 89-137 17-63 (78)
140 2kiz_A E3 ubiquitin-protein li 90.5 0.062 2.1E-06 32.3 0.5 45 89-137 16-62 (69)
141 2jtn_A LIM domain-binding prot 90.1 0.3 1E-05 35.1 4.0 96 36-134 59-178 (182)
142 2djb_A Polycomb group ring fin 90.1 0.055 1.9E-06 33.0 -0.0 37 33-71 11-47 (72)
143 1weq_A PHD finger protein 7; s 90.0 0.23 7.8E-06 32.1 2.8 33 101-134 45-78 (85)
144 3l11_A E3 ubiquitin-protein li 89.8 0.13 4.6E-06 34.1 1.7 46 33-87 11-56 (115)
145 1vyx_A ORF K3, K3RING; zinc-bi 89.8 0.013 4.6E-07 35.3 -3.0 36 36-72 5-43 (60)
146 2l0b_A E3 ubiquitin-protein li 89.5 0.091 3.1E-06 33.7 0.7 43 89-135 42-86 (91)
147 2yur_A Retinoblastoma-binding 89.1 0.095 3.2E-06 32.2 0.5 37 33-71 11-47 (74)
148 2ecw_A Tripartite motif-contai 88.9 0.076 2.6E-06 32.9 -0.0 36 33-71 15-50 (85)
149 2ep4_A Ring finger protein 24; 88.9 0.094 3.2E-06 31.9 0.4 44 89-136 17-62 (74)
150 4a0k_B E3 ubiquitin-protein li 88.6 0.092 3.2E-06 35.8 0.2 37 36-72 47-98 (117)
151 2ysl_A Tripartite motif-contai 88.1 0.16 5.5E-06 30.7 1.1 46 89-137 22-68 (73)
152 1v87_A Deltex protein 2; ring- 88.0 0.054 1.9E-06 35.9 -1.3 36 36-71 24-74 (114)
153 3dpl_R Ring-box protein 1; ubi 87.8 0.068 2.3E-06 35.7 -0.9 37 36-72 36-87 (106)
154 1vyx_A ORF K3, K3RING; zinc-bi 87.6 0.043 1.5E-06 33.0 -1.8 46 89-137 8-58 (60)
155 2ecn_A Ring finger protein 141 87.1 0.11 3.7E-06 31.3 -0.2 34 34-71 12-45 (70)
156 2ct2_A Tripartite motif protei 86.8 0.18 6.3E-06 31.5 0.8 39 33-71 11-50 (88)
157 1v87_A Deltex protein 2; ring- 85.8 0.2 6.7E-06 33.1 0.6 34 105-138 58-94 (114)
158 2pv0_B DNA (cytosine-5)-methyl 85.4 0.11 3.7E-06 42.5 -1.1 50 35-87 91-145 (386)
159 2lq6_A Bromodomain-containing 84.1 0.36 1.2E-05 31.1 1.2 29 89-118 19-49 (87)
160 2ecy_A TNF receptor-associated 83.9 0.41 1.4E-05 28.3 1.4 43 89-137 17-61 (66)
161 1chc_A Equine herpes virus-1 r 83.2 0.12 4.2E-06 30.8 -1.3 34 36-71 4-37 (68)
162 2csy_A Zinc finger protein 183 83.1 0.22 7.6E-06 30.8 -0.1 34 35-71 13-46 (81)
163 2ecj_A Tripartite motif-contai 83.0 0.65 2.2E-05 26.4 1.9 40 89-132 17-58 (58)
164 3dpl_R Ring-box protein 1; ubi 81.7 0.45 1.5E-05 31.6 1.0 30 103-136 68-99 (106)
165 2lq6_A Bromodomain-containing 81.1 0.5 1.7E-05 30.4 1.1 30 37-69 17-50 (87)
166 3nw0_A Non-structural maintena 81.0 0.66 2.2E-05 35.2 1.8 45 89-135 182-226 (238)
167 2ecv_A Tripartite motif-contai 80.8 1.4 4.6E-05 26.9 3.0 35 33-70 15-49 (85)
168 1jm7_A BRCA1, breast cancer ty 80.7 0.52 1.8E-05 30.7 1.0 44 89-136 23-68 (112)
169 2rgt_A Fusion of LIM/homeobox 80.5 1.7 5.8E-05 30.7 3.8 97 37-136 6-126 (169)
170 2egp_A Tripartite motif-contai 79.4 1.1 3.8E-05 27.1 2.2 46 89-137 14-64 (79)
171 2ecv_A Tripartite motif-contai 78.6 0.59 2E-05 28.6 0.7 46 89-137 21-70 (85)
172 1bor_A Transcription factor PM 78.6 2.5 8.4E-05 24.2 3.5 31 36-69 5-35 (56)
173 2eli_A Protein kinase C alpha 76.7 5.2 0.00018 25.2 4.9 34 36-69 27-62 (85)
174 2ct2_A Tripartite motif protei 76.6 0.69 2.4E-05 28.7 0.6 48 89-137 17-67 (88)
175 3ng2_A RNF4, snurf, ring finge 74.9 0.4 1.4E-05 28.6 -0.8 45 89-137 12-62 (71)
176 4a0k_B E3 ubiquitin-protein li 74.6 0.62 2.1E-05 31.6 0.0 30 103-136 79-110 (117)
177 4ayc_A E3 ubiquitin-protein li 74.4 0.36 1.2E-05 33.2 -1.3 32 37-71 53-84 (138)
178 3lrq_A E3 ubiquitin-protein li 72.5 1 3.6E-05 29.0 0.7 43 89-136 24-68 (100)
179 2xeu_A Ring finger protein 4; 72.4 0.42 1.4E-05 27.7 -1.2 45 89-137 5-55 (64)
180 3pfq_A PKC-B, PKC-beta, protei 72.1 2.3 7.8E-05 36.5 2.9 83 36-118 47-146 (674)
181 6rxn_A Rubredoxin; electron tr 72.0 3.3 0.00011 23.4 2.7 17 119-136 24-40 (46)
182 2co8_A NEDD9 interacting prote 71.4 5.5 0.00019 24.5 4.0 30 35-66 13-42 (82)
183 3l11_A E3 ubiquitin-protein li 71.4 2 6.7E-05 28.2 1.9 45 89-137 17-61 (115)
184 2ckl_A Polycomb group ring fin 70.2 0.53 1.8E-05 30.8 -1.2 35 35-71 13-47 (108)
185 2a20_A Regulating synaptic mem 69.7 1.4 4.7E-05 26.5 0.7 48 89-136 11-61 (62)
186 1jm7_B BARD1, BRCA1-associated 69.3 2.3 7.8E-05 28.1 1.9 35 35-71 20-54 (117)
187 1faq_A RAF-1; transferase, ser 69.2 3.2 0.00011 23.3 2.3 32 37-70 14-45 (52)
188 1weq_A PHD finger protein 7; s 68.7 3.2 0.00011 26.6 2.4 33 50-88 44-77 (85)
189 3nw0_A Non-structural maintena 68.5 1.2 4E-05 33.8 0.3 33 37-71 180-212 (238)
190 2jrp_A Putative cytoplasmic pr 68.4 2.3 8E-05 27.0 1.7 25 38-62 3-28 (81)
191 1t1h_A Gspef-atpub14, armadill 68.1 0.5 1.7E-05 28.8 -1.5 35 34-71 5-39 (78)
192 1weo_A Cellulose synthase, cat 67.3 1.3 4.4E-05 28.8 0.3 46 36-87 15-64 (93)
193 3k1l_B Fancl; UBC, ring, RWD, 67.2 1.4 4.9E-05 35.7 0.6 47 89-135 310-370 (381)
194 3fl2_A E3 ubiquitin-protein li 67.1 1.3 4.5E-05 29.5 0.3 43 89-137 54-98 (124)
195 2lk0_A RNA-binding protein 5; 66.7 1.3 4.5E-05 23.0 0.2 17 124-140 3-19 (32)
196 2k1p_A Zinc finger RAN-binding 66.7 2.6 8.9E-05 22.0 1.4 18 123-140 3-20 (33)
197 2y43_A E3 ubiquitin-protein li 66.3 0.61 2.1E-05 29.9 -1.5 35 35-71 20-54 (99)
198 2d8y_A Eplin protein; LIM doma 66.1 7.1 0.00024 24.3 3.7 31 35-67 13-43 (91)
199 1e4u_A Transcriptional repress 66.0 3.2 0.00011 25.7 2.0 30 107-138 32-62 (78)
200 2ckl_B Ubiquitin ligase protei 63.2 2.6 8.9E-05 29.5 1.3 43 89-136 56-100 (165)
201 1n0z_A ZNF265; zinc finger, RN 61.6 6.4 0.00022 22.0 2.5 20 77-96 10-39 (45)
202 1b8t_A Protein (CRP1); LIM dom 61.4 4.2 0.00014 29.2 2.1 27 90-118 118-144 (192)
203 2fnf_X Putative RAS effector N 59.0 4.6 0.00016 24.7 1.7 33 36-69 34-66 (72)
204 2enz_A NPKC-theta, protein kin 55.7 10 0.00036 22.3 2.9 33 37-69 23-57 (65)
205 4b2u_A S67; toxin, ICK; NMR {S 55.6 3.5 0.00012 21.4 0.6 24 114-137 2-29 (36)
206 3k1l_B Fancl; UBC, ring, RWD, 54.4 8.3 0.00028 31.2 2.9 36 36-71 307-347 (381)
207 1wig_A KIAA1808 protein; LIM d 54.3 7.6 0.00026 23.2 2.2 17 79-96 24-40 (73)
208 1g25_A CDK-activating kinase a 53.8 3.3 0.00011 24.1 0.4 46 89-137 5-54 (65)
209 4rxn_A Rubredoxin; electron tr 53.7 12 0.00041 21.8 2.8 15 121-136 32-46 (54)
210 3ztg_A E3 ubiquitin-protein li 53.6 1.2 4.1E-05 28.0 -1.8 37 33-71 9-45 (92)
211 1zbd_B Rabphilin-3A; G protein 52.0 7.1 0.00024 26.9 1.9 18 123-140 95-112 (134)
212 3j21_g 50S ribosomal protein L 51.8 7.1 0.00024 22.5 1.6 30 103-142 15-44 (51)
213 2dj7_A Actin-binding LIM prote 51.7 19 0.00066 21.8 3.8 30 36-67 14-43 (80)
214 2cu8_A Cysteine-rich protein 2 51.4 6.5 0.00022 23.5 1.5 10 86-95 35-44 (76)
215 2lv2_A Insulinoma-associated p 51.3 25 0.00085 21.7 4.3 26 37-62 28-66 (85)
216 2cup_A Skeletal muscle LIM-pro 51.3 19 0.00065 22.5 3.9 77 37-117 5-95 (101)
217 1kbe_A Kinase suppressor of RA 51.2 9.3 0.00032 21.7 2.0 29 88-118 15-43 (49)
218 1rfh_A RAS association (ralgds 50.4 3.5 0.00012 24.1 0.1 33 36-69 21-53 (59)
219 2v3b_B Rubredoxin 2, rubredoxi 49.9 15 0.00053 21.3 2.9 15 121-136 32-46 (55)
220 3a9j_C Mitogen-activated prote 49.6 7.7 0.00026 20.0 1.4 10 79-88 6-15 (34)
221 1x62_A C-terminal LIM domain p 49.4 24 0.00083 21.1 4.0 11 37-47 15-25 (79)
222 1zfo_A LAsp-1; LIM domain, zin 49.4 8.5 0.00029 19.4 1.5 27 89-117 5-31 (31)
223 2dar_A PDZ and LIM domain prot 49.1 18 0.00062 22.3 3.4 11 37-47 25-35 (90)
224 1z6u_A NP95-like ring finger p 49.0 4.1 0.00014 28.4 0.3 43 89-137 80-124 (150)
225 1e8j_A Rubredoxin; iron-sulfur 48.5 17 0.0006 20.8 3.0 15 121-136 32-46 (52)
226 1x6a_A LIMK-2, LIM domain kina 48.1 13 0.00044 22.4 2.5 10 124-133 62-71 (81)
227 1nj3_A NPL4; NZF domain, rubre 47.6 7.8 0.00027 19.5 1.2 9 80-88 5-13 (31)
228 1yk4_A Rubredoxin, RD; electro 47.6 20 0.00068 20.5 3.1 15 121-136 31-45 (52)
229 1dx8_A Rubredoxin; electron tr 47.2 24 0.00083 21.5 3.6 16 121-137 36-51 (70)
230 2zet_C Melanophilin; complex, 46.9 8.7 0.0003 27.1 1.8 15 123-137 105-119 (153)
231 2kn9_A Rubredoxin; metalloprot 46.7 23 0.00077 22.4 3.5 16 120-136 55-70 (81)
232 3uej_A NPKC-delta, protein kin 46.3 6.4 0.00022 23.3 0.9 33 37-69 20-54 (65)
233 2yuu_A NPKC-delta, protein kin 46.1 11 0.00039 23.4 2.0 34 36-69 27-62 (83)
234 2ffw_A Midline-1; B-BOX, ring 45.1 46 0.0016 20.3 4.8 34 36-69 29-62 (78)
235 1ptq_A Protein kinase C delta 43.2 10 0.00035 20.9 1.4 30 89-118 13-44 (50)
236 2ehe_A Four and A half LIM dom 43.0 51 0.0018 19.6 6.3 17 79-96 36-52 (82)
237 2ee8_A Protein ODD-skipped-rel 41.6 38 0.0013 20.6 4.1 35 101-135 44-82 (106)
238 2db6_A SH3 and cysteine rich d 41.2 12 0.00042 22.7 1.6 34 36-69 27-62 (74)
239 2d9g_A YY1-associated factor 2 40.0 14 0.00049 21.2 1.7 11 78-88 8-18 (53)
240 1x4w_A Hypothetical protein FL 39.4 25 0.00086 21.4 2.7 23 36-62 14-41 (67)
241 3hct_A TNF receptor-associated 39.3 4.3 0.00015 26.7 -0.8 43 89-137 20-64 (118)
242 1v5n_A PDI-like hypothetical p 38.2 12 0.0004 23.8 1.2 30 89-119 49-78 (89)
243 2lbz_A Thuricin17, thurincin H 37.8 12 0.0004 18.7 0.9 15 81-95 1-15 (31)
244 2enn_A NPKC-theta, protein kin 37.4 19 0.00064 22.0 2.0 30 89-118 36-67 (77)
245 4ic3_A E3 ubiquitin-protein li 37.2 11 0.00039 22.5 1.0 31 36-69 23-54 (74)
246 1s24_A Rubredoxin 2; electron 36.8 28 0.00097 22.2 2.8 16 120-136 63-78 (87)
247 1iml_A CRIP, cysteine rich int 36.7 13 0.00045 22.1 1.2 12 85-96 25-36 (76)
248 1rmd_A RAG1; V(D)J recombinati 36.6 6.4 0.00022 25.7 -0.3 42 89-136 25-68 (116)
249 1r79_A Diacylglycerol kinase, 36.2 16 0.00056 23.0 1.6 31 88-118 39-72 (84)
250 2ea5_A Cell growth regulator w 35.8 23 0.0008 20.9 2.2 31 35-68 13-44 (68)
251 1x4l_A Skeletal muscle LIM-pro 35.2 18 0.00061 21.2 1.6 16 80-96 29-44 (72)
252 2dmd_A Zinc finger protein 64, 33.8 31 0.001 20.6 2.7 11 52-62 8-18 (96)
253 1pft_A TFIIB, PFTFIIBN; N-term 33.7 23 0.00079 19.6 1.9 16 99-114 21-36 (50)
254 1x64_A Alpha-actinin-2 associa 33.4 70 0.0024 19.4 4.4 11 37-47 25-35 (89)
255 2d8z_A Four and A half LIM dom 33.0 13 0.00045 21.6 0.8 14 81-95 26-39 (70)
256 2yrc_A Protein transport prote 32.7 15 0.00051 21.6 0.9 38 97-136 4-43 (59)
257 1wfp_A Zinc finger (AN1-like) 32.0 74 0.0025 19.6 4.1 25 36-62 24-48 (74)
258 4gzn_C ZFP-57, zinc finger pro 31.6 19 0.00066 20.7 1.3 13 100-112 30-42 (60)
259 2jun_A Midline-1; B-BOX, TRIM, 30.4 13 0.00045 23.4 0.5 33 37-69 3-35 (101)
260 2cr8_A MDM4 protein; ZF-ranbp 29.9 21 0.00073 20.6 1.2 17 121-137 6-22 (53)
261 2hf1_A Tetraacyldisaccharide-1 29.6 25 0.00084 21.3 1.6 15 100-114 24-38 (68)
262 2kmk_A Zinc finger protein GFI 29.3 26 0.0009 20.1 1.7 9 126-134 57-65 (82)
263 2jr6_A UPF0434 protein NMA0874 29.2 25 0.00087 21.2 1.6 15 100-114 24-38 (68)
264 2els_A Zinc finger protein 406 29.1 27 0.00094 16.5 1.5 12 101-112 8-19 (36)
265 2js4_A UPF0434 protein BB2007; 29.1 25 0.00087 21.4 1.6 16 100-115 24-39 (70)
266 1wim_A KIAA0161 protein; ring 28.8 13 0.00045 23.2 0.2 47 89-135 7-61 (94)
267 1x68_A FHL5 protein; four-and- 28.7 31 0.0011 20.4 2.0 16 80-96 29-44 (76)
268 1y8f_A UNC-13 homolog A, MUNC1 28.6 21 0.00071 21.1 1.1 30 89-118 26-57 (66)
269 2pk7_A Uncharacterized protein 28.5 27 0.00092 21.2 1.6 16 99-114 23-38 (69)
270 2ebr_A Nuclear pore complex pr 27.5 35 0.0012 19.2 1.8 19 120-138 5-23 (47)
271 1bbo_A Human enhancer-binding 27.2 38 0.0013 17.9 2.1 7 104-110 31-37 (57)
272 2cuq_A Four and A half LIM dom 27.2 52 0.0018 19.4 2.8 10 86-95 40-49 (80)
273 4b6d_A RAC GTPase-activating p 27.0 40 0.0014 19.7 2.2 30 89-118 21-51 (61)
274 2elv_A Zinc finger protein 406 26.6 34 0.0012 16.2 1.6 12 101-112 8-19 (36)
275 2k4x_A 30S ribosomal protein S 26.6 22 0.00076 20.5 0.9 13 125-137 35-47 (55)
276 3knv_A TNF receptor-associated 26.6 5 0.00017 27.6 -2.3 35 34-71 28-62 (141)
277 3uk3_C Zinc finger protein 217 26.1 34 0.0012 18.1 1.7 8 104-111 34-41 (57)
278 2yho_A E3 ubiquitin-protein li 25.7 25 0.00087 21.3 1.2 11 127-137 50-60 (79)
279 2epr_A POZ-, at HOOK-, and zin 25.7 43 0.0015 17.2 2.0 34 100-133 10-47 (48)
280 2c6a_A Ubiquitin-protein ligas 25.5 39 0.0013 19.0 1.7 9 80-88 12-20 (46)
281 2jny_A Uncharacterized BCR; st 25.1 33 0.0011 20.7 1.6 15 100-114 26-40 (67)
282 4cpa_I Metallocarboxypeptidase 25.1 20 0.00069 19.0 0.5 12 124-135 19-30 (38)
283 2crc_A Ubiquitin conjugating e 25.0 28 0.00095 20.0 1.1 9 80-88 9-17 (52)
284 2yt9_A Zinc finger-containing 24.8 47 0.0016 19.6 2.4 14 50-63 5-18 (95)
285 1wgm_A Ubiquitin conjugation f 24.6 56 0.0019 20.7 2.7 36 33-71 18-54 (98)
286 2y1n_A E3 ubiquitin-protein li 24.1 9.4 0.00032 31.0 -1.4 30 38-70 333-362 (389)
287 2l3k_A Rhombotin-2, linker, LI 24.0 35 0.0012 22.4 1.7 37 79-116 29-73 (123)
288 1yuz_A Nigerythrin; rubrythrin 23.6 57 0.002 23.7 2.9 11 127-137 187-197 (202)
289 2l9z_A PR domain zinc finger p 23.0 72 0.0025 17.2 2.5 19 100-118 9-27 (39)
290 2elr_A Zinc finger protein 406 22.9 42 0.0014 15.7 1.5 10 103-112 10-19 (36)
291 1a7i_A QCRP2 (LIM1); LIM domai 22.5 32 0.0011 20.6 1.2 11 85-95 32-42 (81)
292 2elt_A Zinc finger protein 406 22.1 47 0.0016 15.5 1.6 12 101-112 8-19 (36)
293 2jne_A Hypothetical protein YF 22.0 21 0.00072 23.4 0.2 52 89-140 34-95 (101)
294 2ebv_A Nuclear pore complex pr 21.9 45 0.0016 19.5 1.7 20 119-138 24-43 (57)
295 2elq_A Zinc finger protein 406 21.9 48 0.0016 15.6 1.6 12 101-112 8-19 (36)
296 3pfq_A PKC-B, PKC-beta, protei 21.5 68 0.0023 27.2 3.4 35 36-70 112-148 (674)
297 2egq_A FHL1 protein; LIM domai 21.2 70 0.0024 18.6 2.6 8 110-117 40-47 (77)
298 2ecg_A Baculoviral IAP repeat- 21.2 42 0.0014 19.8 1.5 40 89-137 27-67 (75)
299 2elp_A Zinc finger protein 406 21.0 50 0.0017 15.6 1.6 12 101-112 8-19 (37)
300 2dlq_A GLI-kruppel family memb 21.0 80 0.0027 19.4 3.0 37 99-135 63-103 (124)
301 3gj5_B Nuclear pore complex pr 20.9 27 0.00094 18.2 0.5 15 123-137 4-18 (34)
302 3gj8_B Nuclear pore complex pr 20.9 25 0.00086 22.3 0.4 21 120-140 59-79 (92)
303 2vje_B MDM4 protein; proto-onc 20.8 7.5 0.00026 22.7 -2.0 11 126-136 44-54 (63)
304 1x63_A Skeletal muscle LIM-pro 20.8 1.3E+02 0.0044 17.6 3.8 15 81-96 38-52 (82)
305 2m0d_A Zinc finger and BTB dom 20.4 42 0.0014 14.6 1.1 11 103-113 4-14 (30)
306 2adr_A ADR1; transcription reg 20.3 58 0.002 17.4 1.9 6 105-110 33-38 (60)
307 2ebq_A Nuclear pore complex pr 20.2 40 0.0014 18.9 1.1 19 120-138 5-23 (47)
308 1srk_A Zinc finger protein ZFP 20.2 49 0.0017 15.3 1.4 12 101-112 6-17 (35)
309 2elx_A Zinc finger protein 406 20.2 46 0.0016 15.3 1.3 13 101-113 6-18 (35)
310 2kvh_A Zinc finger and BTB dom 20.1 45 0.0015 14.4 1.2 9 104-112 5-13 (27)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=167.86 Aligned_cols=99 Identities=32% Similarity=0.780 Sum_probs=89.8
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceecCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHN 114 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~ 114 (145)
.++++|.+|++.|+.++||.|+.|+++||+.||+++... ++.+.|+|++|++|.+|++.+++..||+||.|+++||+
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~---~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~ 81 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTP---LKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHT 81 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCT---TTSTTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEEEG
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCcccc---ccccCccCCcCCcccccCccCCCCCeeECCCCCcHHhH
Confidence 478999999999987888999999999999999997643 34679999999999999998888899999999999999
Q ss_pred cccc--CCCCCCCCccccccccch
Q psy17723 115 YCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 115 ~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
+||+ |..+|++.|+|+.|...+
T Consensus 82 ~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 82 FCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp GGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred HhcCCccccCCCCCcCCcCCcCcC
Confidence 9998 889999999999997654
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.94 E-value=1.2e-28 Score=171.96 Aligned_cols=103 Identities=38% Similarity=0.856 Sum_probs=89.5
Q ss_pred ccccccccccC-------CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceecCCcc
Q psy17723 37 SDKCKACDRDT-------SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFCDLCD 109 (145)
Q Consensus 37 ~~~C~~C~~~~-------~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~ 109 (145)
+++|.+|.+++ +.++||.|++|+++||+.||++...+...++.+.|+|++|++|.+|+..++++.||+||.|+
T Consensus 1 ~~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~ 80 (114)
T 2kwj_A 1 GSYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCD 80 (114)
T ss_dssp CCCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTTTTEEECSSSC
T ss_pred CCcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCCCceEEcCCCC
Confidence 36899998764 34799999999999999999987554445567899999999999999988889999999999
Q ss_pred ccccccccc--CCCCCCCCccccccccchhhh
Q psy17723 110 RGYHNYCIG--LDKIPTVGLVFTLKKKKNKKK 139 (145)
Q Consensus 110 ~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~~ 139 (145)
++||++||+ |..+|++.|+|+.|....+++
T Consensus 81 ~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~k 112 (114)
T 2kwj_A 81 RGYHMYCLNPPVAEPPEGSWSCHLCWELLKEK 112 (114)
T ss_dssp CEEETTTSSSCCSSCCSSCCCCHHHHHHHHHT
T ss_pred ccccccccCCCccCCCCCCeECccccchhhcc
Confidence 999999998 899999999999998765443
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.94 E-value=8.4e-28 Score=167.14 Aligned_cols=101 Identities=33% Similarity=0.791 Sum_probs=86.5
Q ss_pred ccccccccccccC------CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccc-cCCCceecCC
Q psy17723 35 PESDKCKACDRDT------SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQ-DDDKMLFCDL 107 (145)
Q Consensus 35 ~~~~~C~~C~~~~------~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~-~~~~ll~Cd~ 107 (145)
.+..+|.+|.+.+ ..++||.|++|++.||++||++...+...++.+.|+|++|++|.+|+..+ +++.||+||.
T Consensus 3 ~p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~~ll~Cd~ 82 (112)
T 3v43_A 3 EPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDS 82 (112)
T ss_dssp CCCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCTTCCCEECTT
T ss_pred ccCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCCccceEEcCC
Confidence 4578999998763 45799999999999999999875444344567899999999999999864 4578999999
Q ss_pred ccccccccccc--CCCCCCCCccccccccc
Q psy17723 108 CDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 108 C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
|+++||++||+ |.++|++.|+|+.|+.+
T Consensus 83 C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~k 112 (112)
T 3v43_A 83 CDRGFHMECCDPPLTRMPKGMWICQICRPR 112 (112)
T ss_dssp TCCEECGGGCSSCCSSCCSSCCCCTTTSCC
T ss_pred CCCeeecccCCCCCCCCCCCCeECCCCCCc
Confidence 99999999996 89999999999999753
No 4
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.71 E-value=9.8e-18 Score=115.27 Aligned_cols=85 Identities=24% Similarity=0.560 Sum_probs=73.5
Q ss_pred CCCccccccccccccCCCCCcEecC--CCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceecCCcc
Q psy17723 32 KPVPESDKCKACDRDTSAGEMIQCG--KCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFCDLCD 109 (145)
Q Consensus 32 ~~~~~~~~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~ 109 (145)
....+++.|.+|+++| +||.|+ .|.++||+.||++ ..++.+.|+|+.| .|.+|++.. .+.|..|+
T Consensus 10 ~~~~~~~~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~L-----~~~P~g~W~Cp~c-~C~~C~k~~----~~~C~~Cp 76 (107)
T 4gne_A 10 PKQMHEDYCFQCGDGG---ELVMCDKKDCPKAYHLLCLNL-----TQPPYGKWECPWH-QCDECSSAA----VSFCEFCP 76 (107)
T ss_dssp CCCSSCSSCTTTCCCS---EEEECCSTTCCCEECTGGGTC-----SSCCSSCCCCGGG-BCTTTCSBC----CEECSSSS
T ss_pred CcCCCCCCCCcCCCCC---cEeEECCCCCCcccccccCcC-----CcCCCCCEECCCC-CCCcCCCCC----CcCcCCCC
Confidence 3456789999999887 999999 8999999999984 4556789999999 799999853 38899999
Q ss_pred ccccccccc--CCCCCCCCccc
Q psy17723 110 RGYHNYCIG--LDKIPTVGLVF 129 (145)
Q Consensus 110 ~~yH~~Cl~--l~~~p~~~W~C 129 (145)
++||..|++ |...+...|+|
T Consensus 77 ~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 77 HSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CEECTTTCTTSCEECTTTTCEE
T ss_pred cchhhhccCCcceecCCCCcee
Confidence 999999997 77778888987
No 5
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.68 E-value=1.8e-17 Score=105.99 Aligned_cols=56 Identities=32% Similarity=0.716 Sum_probs=52.3
Q ss_pred CCcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCC-Cccccccccc
Q psy17723 79 LYDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTV-GLVFTLKKKK 135 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~-~W~C~~C~~~ 135 (145)
+..|+|++| .|.+|++.++++.||+||.|+++||++||+ |+.+|+| .|+|+.|..+
T Consensus 11 ~~~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 11 DVNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp CTTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 358999999 999999988889999999999999999998 8999999 9999999864
No 6
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.1e-16 Score=104.08 Aligned_cols=54 Identities=33% Similarity=0.756 Sum_probs=50.9
Q ss_pred CcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCC-Ccccccccc
Q psy17723 80 YDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTV-GLVFTLKKK 134 (145)
Q Consensus 80 ~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~-~W~C~~C~~ 134 (145)
..|+|++| .|.+|++.++++.||+||.|+++||++||+ |..+|+| .|+|+.|..
T Consensus 20 ~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 47999999 999999988899999999999999999998 8999999 999999975
No 7
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.3e-16 Score=103.61 Aligned_cols=54 Identities=33% Similarity=0.770 Sum_probs=50.7
Q ss_pred CcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCCC-cccccccc
Q psy17723 80 YDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVG-LVFTLKKK 134 (145)
Q Consensus 80 ~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~-W~C~~C~~ 134 (145)
..|+|++| .|.+|++.++++.||+||.|+++||++||+ |..+|++. |+|+.|+.
T Consensus 20 ~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 58999999 999999998889999999999999999998 89999998 99999975
No 8
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=3.9e-16 Score=104.65 Aligned_cols=60 Identities=33% Similarity=0.555 Sum_probs=54.7
Q ss_pred CCcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchhh
Q psy17723 79 LYDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~ 138 (145)
...|.+.+..+|.||+..++++.||+||.|+++||++||+ |..+|++.|+|+.|...+.+
T Consensus 8 ~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~ 69 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECK 69 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHS
T ss_pred CchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCcccc
Confidence 4589999999999999988788999999999999999998 88999999999999876543
No 9
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.53 E-value=2.9e-15 Score=89.81 Aligned_cols=46 Identities=28% Similarity=0.769 Sum_probs=42.6
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCcccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKK 134 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~ 134 (145)
+|.+|++.++++.||+||.|+++||++|++ ++++|+++|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588999988888999999999999999995 8899999999999975
No 10
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.49 E-value=7.3e-15 Score=97.92 Aligned_cols=54 Identities=24% Similarity=0.450 Sum_probs=43.9
Q ss_pred cCccccccccCCCceecCCcc---cccccccccCCCCCCCCccccc-cccchhhhhhccC
Q psy17723 89 SCVACEKAQDDDKMLFCDLCD---RGYHNYCIGLDKIPTVGLVFTL-KKKKNKKKKKKKK 144 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~---~~yH~~Cl~l~~~p~~~W~C~~-C~~~~~~~~~~~~ 144 (145)
+| +|++.++ +.||.||.|+ .|||+.|++|+.+|.+.|+|+. |....+.++|+||
T Consensus 28 yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~~~k~~~k~~~ 85 (90)
T 2jmi_A 28 YC-FCRNVSY-GPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEIANQRSKSKR 85 (90)
T ss_dssp CS-TTTCCCS-SSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHHHHHHSSCC--
T ss_pred EE-EeCCCCC-CCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcchhhccccccc
Confidence 66 7887654 4799999977 9999999999999999999999 9977665555554
No 11
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.47 E-value=9.5e-15 Score=94.16 Aligned_cols=53 Identities=34% Similarity=0.560 Sum_probs=43.4
Q ss_pred cCccccccccCCCceecCCcccccccccccCCC--CCCCCccccccccchhhhhh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDK--IPTVGLVFTLKKKKNKKKKK 141 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~--~p~~~W~C~~C~~~~~~~~~ 141 (145)
+|.+|++.++++.||.||.|+.|||+.|++++. +|.+.|+|+.|..+.+|+||
T Consensus 20 ~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~kk 74 (75)
T 2k16_A 20 ICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKDKK 74 (75)
T ss_dssp CBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSCCC
T ss_pred CCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhccc
Confidence 667889887777899999999999999999544 45689999999877655544
No 12
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.46 E-value=1e-14 Score=93.33 Aligned_cols=50 Identities=24% Similarity=0.618 Sum_probs=44.0
Q ss_pred cCccccccc--cCCCceecCCcccccccccccCCCCCCCCccccccccchhh
Q psy17723 89 SCVACEKAQ--DDDKMLFCDLCDRGYHNYCIGLDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 89 ~C~vC~~~~--~~~~ll~Cd~C~~~yH~~Cl~l~~~p~~~W~C~~C~~~~~~ 138 (145)
+|.||++.+ +++.||+||.|+++||++|++++.+|+|+|+|+.|...+.+
T Consensus 18 ~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~~~~ 69 (71)
T 2ku3_A 18 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRAR 69 (71)
T ss_dssp SCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCcCcc
Confidence 788998764 67899999999999999999988899999999999875543
No 13
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.45 E-value=4.4e-14 Score=87.80 Aligned_cols=47 Identities=28% Similarity=0.584 Sum_probs=41.1
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchhh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~ 138 (145)
+|.+|+. ++.||+||.|+++||++||+ |+.+|++.|+|+.|..+..|
T Consensus 11 ~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 11 FCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp SCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCT
T ss_pred cCCCCCC---CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchhc
Confidence 6778886 46899999999999999998 88999999999999876544
No 14
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.44 E-value=5.1e-14 Score=107.90 Aligned_cols=56 Identities=32% Similarity=0.716 Sum_probs=47.0
Q ss_pred CCcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCC-Cccccccccc
Q psy17723 79 LYDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTV-GLVFTLKKKK 135 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~-~W~C~~C~~~ 135 (145)
...|+|..| .|.+|+..++++.||+||.|+++||++||+ |..+|+| .|+|+.|..+
T Consensus 167 ~~~w~C~~c-~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 167 DVNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp CTTSCCTTT-SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CcCEecCCC-CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 347999999 999999988889999999999999999998 8999999 9999999754
No 15
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.43 E-value=4.3e-14 Score=89.15 Aligned_cols=46 Identities=22% Similarity=0.383 Sum_probs=40.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|++ ++.||+||.|+++||++||+ |..+|++.|+|+.|+.+..
T Consensus 14 ~C~vC~~---~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~ 61 (66)
T 2lri_C 14 RCGVCGD---GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVT 61 (66)
T ss_dssp CCTTTSC---CTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCC
T ss_pred CcCCCCC---CCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCCc
Confidence 5778875 56799999999999999996 8899999999999987644
No 16
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.41 E-value=4.9e-14 Score=88.84 Aligned_cols=48 Identities=23% Similarity=0.598 Sum_probs=41.1
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchhhh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNKKK 139 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~~ 139 (145)
+|.||+. ++.||+||.|+++||++||+ |+.+|++.|+|+.|...+.++
T Consensus 10 ~C~vC~~---~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 10 ECAVCRD---GGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp SBSSSSC---CSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCccCCC---CCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 5668876 46899999999999999998 889999999999998765443
No 17
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.40 E-value=6.7e-14 Score=86.60 Aligned_cols=48 Identities=33% Similarity=0.666 Sum_probs=42.0
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchhhh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNKKK 139 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~~ 139 (145)
+|.+|+. .+.||.||.|+++||++|++ ++.+|++.|+|+.|.....++
T Consensus 7 ~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~~ 56 (60)
T 2puy_A 7 FCSVCRK---SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 56 (60)
T ss_dssp SCTTTCC---CSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHHHT
T ss_pred CCcCCCC---CCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhhch
Confidence 6778887 46899999999999999998 889999999999998766544
No 18
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.40 E-value=1.4e-13 Score=88.05 Aligned_cols=49 Identities=22% Similarity=0.490 Sum_probs=42.0
Q ss_pred cCccccccccCCCceecCC--cc-cccccccccCCCCCCCCccccccccchhhh
Q psy17723 89 SCVACEKAQDDDKMLFCDL--CD-RGYHNYCIGLDKIPTVGLVFTLKKKKNKKK 139 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~--C~-~~yH~~Cl~l~~~p~~~W~C~~C~~~~~~~ 139 (145)
+| +|++..+ +.||.||. |+ .|||+.|++|+.+|.+.|+|+.|...++++
T Consensus 18 ~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~k~ 69 (71)
T 1wen_A 18 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPS 69 (71)
T ss_dssp CS-TTCCCSC-SSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSSSC
T ss_pred EE-ECCCCCC-CCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcccccc
Confidence 67 7888654 68999999 77 799999999999999999999998766554
No 19
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=6.7e-14 Score=89.25 Aligned_cols=54 Identities=24% Similarity=0.453 Sum_probs=45.4
Q ss_pred cCccccccccCCCceecCCcc---cccccccccCCCCCCCCccccccccchhhhhhccC
Q psy17723 89 SCVACEKAQDDDKMLFCDLCD---RGYHNYCIGLDKIPTVGLVFTLKKKKNKKKKKKKK 144 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~---~~yH~~Cl~l~~~p~~~W~C~~C~~~~~~~~~~~~ 144 (145)
+| +|++.++ +.||.||.|+ .|||+.|++|+..|.+.|+|+.|....+++++++|
T Consensus 8 yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~~k~~~~~~ 64 (70)
T 1x4i_A 8 YC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAMKRRGSRHK 64 (70)
T ss_dssp CS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHHHHHHTTCC
T ss_pred EE-EcCCCCC-CCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCccccccccccc
Confidence 56 5887654 5899999986 89999999999999999999999988776666554
No 20
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.38 E-value=9e-14 Score=92.38 Aligned_cols=55 Identities=20% Similarity=0.451 Sum_probs=45.0
Q ss_pred ccCcccccccc--CCCceecCCccccccccccc--CC----CCCCCCccccccccchhhhhhc
Q psy17723 88 KSCVACEKAQD--DDKMLFCDLCDRGYHNYCIG--LD----KIPTVGLVFTLKKKKNKKKKKK 142 (145)
Q Consensus 88 ~~C~vC~~~~~--~~~ll~Cd~C~~~yH~~Cl~--l~----~~p~~~W~C~~C~~~~~~~~~~ 142 (145)
.+|.||+..++ ++.||+||.|+++||++||+ |. .+|++.|+|+.|....+++.++
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~~~~ 79 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQK 79 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCSTTC
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhhccc
Confidence 37889997654 47899999999999999998 54 3899999999999876655443
No 21
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.38 E-value=6.2e-14 Score=88.15 Aligned_cols=52 Identities=25% Similarity=0.627 Sum_probs=42.6
Q ss_pred cCcccccc--ccCCCceecCCccccccccccc--CCC--C-CCCCccccccccchhhhh
Q psy17723 89 SCVACEKA--QDDDKMLFCDLCDRGYHNYCIG--LDK--I-PTVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 89 ~C~vC~~~--~~~~~ll~Cd~C~~~yH~~Cl~--l~~--~-p~~~W~C~~C~~~~~~~~ 140 (145)
+|.||+.. .+++.||+||.|+++||++|++ ++. + |++.|+|+.|...+..||
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~kr 66 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKR 66 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSCCC
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccccCC
Confidence 78899875 3458999999999999999998 444 3 899999999987766554
No 22
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.38 E-value=2.9e-13 Score=84.07 Aligned_cols=45 Identities=27% Similarity=0.719 Sum_probs=39.7
Q ss_pred ccCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccc
Q psy17723 88 KSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 88 ~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
.+|.+|++ .+.||+||.|+++||++||+ ++.+|++.|+|+.|..+
T Consensus 12 ~~C~vC~~---~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 12 DYCEVCQQ---GGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCTTTSC---CSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCccCCC---CCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 37778887 46899999999999999998 57899999999999865
No 23
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.37 E-value=5.1e-13 Score=88.55 Aligned_cols=55 Identities=18% Similarity=0.405 Sum_probs=47.0
Q ss_pred CCcccccccccCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 79 LYDWQCSDCKSCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
...|.-.+-.+|.+|+.. +.||+||.|+++||++||+ |+.+|+++|+|+.|....
T Consensus 17 ~~~~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCCSSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cccccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 346667777789999974 5899999999999999994 899999999999998653
No 24
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.36 E-value=6.9e-14 Score=92.94 Aligned_cols=49 Identities=24% Similarity=0.612 Sum_probs=43.2
Q ss_pred cCccccccc--cCCCceecCCcccccccccccCCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQ--DDDKMLFCDLCDRGYHNYCIGLDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~--~~~~ll~Cd~C~~~yH~~Cl~l~~~p~~~W~C~~C~~~~~ 137 (145)
+|.||+..+ +++.||+||.|+.+||++|++++.+|+|.|+|+.|.....
T Consensus 27 ~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 27 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred cCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccc
Confidence 778999765 5679999999999999999998889999999999987544
No 25
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=2.4e-13 Score=83.01 Aligned_cols=43 Identities=33% Similarity=0.716 Sum_probs=38.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCcccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKK 134 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~ 134 (145)
+|.+|+. .+.||.||.|+++||++||+ |+.+|++.|+|+.|..
T Consensus 11 ~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 11 FCSVCRK---SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCSSSCC---SSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCccCCC---CCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 6778887 36899999999999999998 8899999999999964
No 26
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.31 E-value=8.8e-13 Score=87.99 Aligned_cols=49 Identities=22% Similarity=0.490 Sum_probs=41.8
Q ss_pred cCccccccccCCCceecCC--cc-cccccccccCCCCCCCCccccccccchhhh
Q psy17723 89 SCVACEKAQDDDKMLFCDL--CD-RGYHNYCIGLDKIPTVGLVFTLKKKKNKKK 139 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~--C~-~~yH~~Cl~l~~~p~~~W~C~~C~~~~~~~ 139 (145)
+| +|++..+ +.||.||. |. .|||+.|++|+.+|.+.|+|+.|...++++
T Consensus 38 yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~k~ 89 (91)
T 1weu_A 38 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPS 89 (91)
T ss_dssp CS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCSSS
T ss_pred EE-ECCCCCC-CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCCcC
Confidence 67 8888664 68999999 66 799999999999999999999998765544
No 27
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.28 E-value=8.6e-13 Score=81.66 Aligned_cols=45 Identities=24% Similarity=0.538 Sum_probs=38.9
Q ss_pred cCccccccccCCCceecCC--cc-cccccccccCCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDL--CD-RGYHNYCIGLDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~--C~-~~yH~~Cl~l~~~p~~~W~C~~C~~~ 135 (145)
+| +|++.++ +.||.||. |. .|||+.|++|+.+|.+.|+|+.|..+
T Consensus 12 ~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 12 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred EE-ECCCcCC-CCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 67 8998764 68999999 55 89999999999999999999999753
No 28
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.26 E-value=1.2e-12 Score=80.75 Aligned_cols=45 Identities=22% Similarity=0.470 Sum_probs=39.5
Q ss_pred cCccccccccCCCceecCC--cc-cccccccccCCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDL--CD-RGYHNYCIGLDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~--C~-~~yH~~Cl~l~~~p~~~W~C~~C~~~ 135 (145)
+| +|++.++ +.||.||. |+ .|||+.|++|+.+|.+.|+|+.|..+
T Consensus 11 yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 11 YC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred EE-ECCCCCC-CCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 67 8998764 68999999 76 79999999999999999999999754
No 29
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.26 E-value=1.2e-12 Score=81.53 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=39.2
Q ss_pred cCccccccccCCCceecCCcc---cccccccccCCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCD---RGYHNYCIGLDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~---~~yH~~Cl~l~~~p~~~W~C~~C~~~ 135 (145)
+| +|++..+ +.||.||.|+ .|||+.|++|+.+|.+.|+|+.|..+
T Consensus 13 yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 13 YC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred EE-ECCCCCC-CCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 67 8998754 5899999955 99999999999999999999999764
No 30
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.25 E-value=7.4e-12 Score=77.63 Aligned_cols=47 Identities=26% Similarity=0.729 Sum_probs=41.3
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
.+++.|.+|+..+ +||.|+.|.++||+.|+.+++. .++.+.|+|+.|
T Consensus 7 ~~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~---~~p~g~W~C~~C 53 (61)
T 1mm2_A 7 HHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLP---EIPNGEWLCPRC 53 (61)
T ss_dssp SSCSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCS---SCCSSCCCCTTT
T ss_pred CCCCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcC---cCCCCccCChhh
Confidence 4688999999887 9999999999999999999764 455789999988
No 31
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=4.5e-12 Score=77.24 Aligned_cols=49 Identities=29% Similarity=0.759 Sum_probs=42.2
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
..+++.|.+|+..+ .||.|+.|.++||+.|+++++. .++.+.|+|+.|.
T Consensus 6 ~~~~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~---~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLK---TIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCC---SCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCCC---eEEEcCCCCcceECccCCCCcC---CCCCCceEChhhh
Confidence 45688999999987 9999999999999999999874 3456899999873
No 32
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.24 E-value=3.3e-12 Score=76.34 Aligned_cols=47 Identities=28% Similarity=0.758 Sum_probs=41.2
Q ss_pred ccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 39 KCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.|.+|+..++.+.||.|+.|.++||+.|+++++. .++.+.|+|+.|.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~---~~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALY---EVPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCC---SCCSSCCSCTTTS
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcC---CCCCCcEECcCcc
Confidence 6999999988889999999999999999998764 4457899999884
No 33
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.21 E-value=6.6e-12 Score=79.00 Aligned_cols=48 Identities=35% Similarity=0.827 Sum_probs=41.7
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.+++.|.+|+..+ +||.|+.|.++||+.|+++++. .++.+.|+|+.|.
T Consensus 6 ~~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~---~~P~g~W~C~~C~ 53 (66)
T 1xwh_A 6 KNEDECAVCRDGG---ELICCDGCPRAFHLACLSPPLR---EIPSGTWRCSSCL 53 (66)
T ss_dssp SCCCSBSSSSCCS---SCEECSSCCCEECTTTSSSCCS---SCCSSCCCCHHHH
T ss_pred CCCCCCccCCCCC---CEEEcCCCChhhcccccCCCcC---cCCCCCeECcccc
Confidence 4688999999988 9999999999999999999774 3456899999873
No 34
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.20 E-value=2.7e-11 Score=80.22 Aligned_cols=53 Identities=19% Similarity=0.535 Sum_probs=45.0
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCcc
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVA 92 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~v 92 (145)
..+++.|.+|+.++ +||.|+.|.+.||+.|+.|++. .++.+.|+|+.|.....
T Consensus 22 d~n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~---~~P~g~W~C~~C~~~~~ 74 (88)
T 1fp0_A 22 DDSATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQ---DVPGEEWSCSLCHVLPD 74 (88)
T ss_dssp SSSSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCC---CCCSSSCCCCSCCCCCS
T ss_pred CCCCCcCcCcCCCC---CEEECCCCCCceecccCCCCCC---CCcCCCcCCccccCCCc
Confidence 35788999999988 8999999999999999999874 44578999998865543
No 35
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-11 Score=82.90 Aligned_cols=53 Identities=25% Similarity=0.577 Sum_probs=45.4
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...++..|.+|+..++.+.||.|+.|.++||+.||+|++. .++.+.|+|+.|.
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~---~~P~g~W~C~~C~ 64 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLP---EIPRGIWRCPKCI 64 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCS---SCCSSCCCCHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcc---cCCCCCcCCccCc
Confidence 4456789999999987788999999999999999999874 4557899999883
No 36
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.19 E-value=7e-12 Score=84.72 Aligned_cols=47 Identities=30% Similarity=0.625 Sum_probs=39.0
Q ss_pred ccCccccccccCCCceecCCcccccccccccC--CCCCCCCccccccccch
Q psy17723 88 KSCVACEKAQDDDKMLFCDLCDRGYHNYCIGL--DKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 88 ~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l--~~~p~~~W~C~~C~~~~ 136 (145)
+.| +|+..++++.||.|+.|++|||+.|+++ ..+| ..|+|+.|..+.
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~~~~ 77 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQPRN 77 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTSSSC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCcCCC
Confidence 456 7888777889999999999999999984 4455 479999998654
No 37
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.19 E-value=8.3e-12 Score=78.61 Aligned_cols=46 Identities=22% Similarity=0.598 Sum_probs=40.0
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
+...|.+|++.+ +||.|+.|.+.||++|+++++. .++.+.|+|+.|
T Consensus 11 ~~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~---~~P~g~W~C~~C 56 (66)
T 2lri_C 11 PGARCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGT---SRPGTGLRCRSC 56 (66)
T ss_dssp TTCCCTTTSCCT---TCEECSSSCCEECHHHHCTTTC---CCCSSSCCCTTT
T ss_pred CCCCcCCCCCCC---eEEECCCCCCceecccCCCccC---cCCCCCEECccc
Confidence 466899999887 8999999999999999999874 455789999988
No 38
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.19 E-value=8.7e-12 Score=76.98 Aligned_cols=47 Identities=30% Similarity=0.781 Sum_probs=41.1
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
.+++.|.+|+..+ .||.|+.|.++||+.|+++++. .++.+.|+|+.|
T Consensus 3 ~~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~---~~p~g~W~C~~C 49 (60)
T 2puy_A 3 IHEDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLK---TIPKGMWICPRC 49 (60)
T ss_dssp CCCSSCTTTCCCS---SCEECSSSSCEECGGGSSSCCS---SCCCSCCCCHHH
T ss_pred CCCCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCcC---CCCCCceEChhc
Confidence 3688999999987 9999999999999999999874 345689999987
No 39
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.16 E-value=1.1e-11 Score=76.91 Aligned_cols=49 Identities=33% Similarity=0.775 Sum_probs=42.0
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
..+++.|.+|+..+ +||.|+.|.++||+.|+++++. .++.+.|+|+.|.
T Consensus 8 ~~~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~---~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 8 TDHQDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDME---KAPEGKWSCPHCE 56 (61)
T ss_dssp SCCCSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCC---SCCCSSCCCTTGG
T ss_pred CCCCCCCccCCCCC---cEEECCCCChhhhhhccCCCCC---CCCCCceECcccc
Confidence 34678999999987 9999999999999999999864 3457899999884
No 40
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.16 E-value=1.3e-11 Score=84.62 Aligned_cols=43 Identities=23% Similarity=0.617 Sum_probs=38.5
Q ss_pred cCccccccccCCCceecC--CcccccccccccCCCCCCCCcccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCD--LCDRGYHNYCIGLDKIPTVGLVFTLKKK 134 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd--~C~~~yH~~Cl~l~~~p~~~W~C~~C~~ 134 (145)
+|.+|+. ++.||.|| .|+++||+.||+|..+|+|.|+||.|.=
T Consensus 17 ~C~~C~~---~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 17 YCFQCGD---GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQC 61 (107)
T ss_dssp SCTTTCC---CSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBC
T ss_pred CCCcCCC---CCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCC
Confidence 6778885 57899999 8999999999999999999999998763
No 41
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=4.4e-11 Score=77.44 Aligned_cols=49 Identities=27% Similarity=0.657 Sum_probs=41.9
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCC-cccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLY-DWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 88 (145)
+..|.+|+..++.+.||.|+.|.+.||++||+|++. .++.+ .|+|+.|.
T Consensus 26 ~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~---~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 26 SCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLD---KVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCS---SCCCSSCCCCTTTC
T ss_pred CCCCcCcCCcCCCCCEEEcCCCCccccccccCCCcc---CCCCCCCcCCcCcc
Confidence 458999998777789999999999999999999874 34466 99999884
No 42
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.10 E-value=4.2e-11 Score=89.02 Aligned_cols=46 Identities=24% Similarity=0.606 Sum_probs=40.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
+|.+|+. ++.||.||.|+++||.+|++ +..+|+|.|+|+.|+....
T Consensus 6 ~C~~C~~---~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 6 WCAVCQN---GGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp SCTTTCC---CSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred ccccCCC---CCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 6788886 46799999999999999995 8899999999999997653
No 43
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.09 E-value=5e-11 Score=75.84 Aligned_cols=47 Identities=26% Similarity=0.750 Sum_probs=39.9
Q ss_pred ccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCC-cccccccc
Q psy17723 39 KCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLY-DWQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 88 (145)
.|.+|+..++.+.||.|+.|.++||++||++++. .++.+ .|+|+.|.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~---~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCS---SCCSSSCCCCTTTS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcC---CCCCCCCcCCcCcc
Confidence 6788898777789999999999999999999875 34466 99999884
No 44
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.08 E-value=2.8e-11 Score=77.21 Aligned_cols=50 Identities=22% Similarity=0.640 Sum_probs=42.6
Q ss_pred CCccccccccccccC--CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDT--SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
...+++.|.+|+..+ +.+.||+|+.|+++||.+|++++. ++.+.|+|+.|
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~-----vP~g~W~C~~C 63 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHC 63 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS-----CCSSCCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc-----CCCCCcCCccC
Confidence 345688999999886 568999999999999999999862 45789999987
No 45
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.07 E-value=3.9e-11 Score=90.78 Aligned_cols=46 Identities=24% Similarity=0.573 Sum_probs=40.1
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
+|.+|+.. +.||+||.|+++||++||+ +..+|+|.|+|+.|....+
T Consensus 9 ~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 9 WCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 67788864 4699999999999999995 8899999999999997654
No 46
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.07 E-value=2.3e-11 Score=76.29 Aligned_cols=54 Identities=24% Similarity=0.507 Sum_probs=42.4
Q ss_pred ccccccccccccC--CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 35 PESDKCKACDRDT--SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.++.+|.+|+... +.+.||+|+.|+.+||+.|+++++......+.+.|+|+.|.
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCc
Confidence 4578999999873 34799999999999999999997642111157899999884
No 47
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.07 E-value=3.5e-11 Score=79.78 Aligned_cols=49 Identities=22% Similarity=0.668 Sum_probs=42.2
Q ss_pred CccccccccccccC--CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 34 VPESDKCKACDRDT--SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 34 ~~~~~~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
..+++.|.+|+.++ +.+.||+|+.|..+||+.|++++. ++.+.|+|+.|
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~-----vP~g~W~C~~C 72 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHC 72 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS-----CCSSCCCCHHH
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc-----cCCCceECccc
Confidence 45688999999887 558999999999999999999963 45789999987
No 48
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.06 E-value=8e-11 Score=80.89 Aligned_cols=55 Identities=22% Similarity=0.713 Sum_probs=46.7
Q ss_pred cccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccc
Q psy17723 38 DKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEK 95 (145)
Q Consensus 38 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~ 95 (145)
..|.+|+..++.+.||.|+.|.++||.+||++++. .++.+.|+|+.|..|..+..
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~---~~P~g~W~C~~C~~c~~g~s 109 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMK---SVPTNGWKCKNCRICISGPS 109 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCS---SCCSSCCCCHHHHCCSCSCC
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccc---cCCCCCcCCcCCcCcCCCCC
Confidence 37889999987788999999999999999999874 44568999999888876654
No 49
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.05 E-value=2.6e-11 Score=78.05 Aligned_cols=48 Identities=23% Similarity=0.471 Sum_probs=39.6
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCCCC---CCccccccccchh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKIPT---VGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~p~---~~W~C~~C~~~~~ 137 (145)
+| +|+++.+ ++.||.||.|..|||..|++++..+. ..|+|+.|.....
T Consensus 12 yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~ 63 (75)
T 3kqi_A 12 YC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHG 63 (75)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHC
T ss_pred EE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCC
Confidence 66 8998754 67899999999999999999766542 5799999997643
No 50
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.04 E-value=1e-10 Score=87.58 Aligned_cols=45 Identities=22% Similarity=0.519 Sum_probs=40.1
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
+|.+|+. ++.||.||.|+++||++|+. +..+|.|.|+|+.|....
T Consensus 4 ~C~~C~~---~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 4 ICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CBTTTCC---CSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred cCccCCC---CCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 6889997 45799999999999999995 889999999999998654
No 51
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.02 E-value=1.6e-10 Score=74.77 Aligned_cols=47 Identities=28% Similarity=0.755 Sum_probs=39.9
Q ss_pred ccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCc-ccccccc
Q psy17723 39 KCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYD-WQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~-W~C~~C~ 88 (145)
.|.+|+..++.+.||.|+.|.++||++||++++.. ++.+. |+|+.|+
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~---~P~g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSS---VPSEDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSS---CCSSSCCCCTTTC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccC---CCCCCceECcCcc
Confidence 68888888877899999999999999999998753 44566 9999884
No 52
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.00 E-value=2.3e-10 Score=84.99 Aligned_cols=48 Identities=27% Similarity=0.732 Sum_probs=42.2
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
++++.|.+|+.+| +||.|+.|.++||..|+.+++. .++.+.|+|+.|+
T Consensus 2 ~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~---~~p~~~W~C~~C~ 49 (184)
T 3o36_A 2 PNEDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLT---NFPSGEWICTFCR 49 (184)
T ss_dssp CSCSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCS---SCCSSCCCCTTTS
T ss_pred CCCCccccCCCCC---eeeecCCCCcccCccccCCCCC---CCCCCCEECcccc
Confidence 4688999999988 8999999999999999999874 4457899999885
No 53
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.99 E-value=1.5e-10 Score=76.67 Aligned_cols=54 Identities=19% Similarity=0.490 Sum_probs=43.4
Q ss_pred ccccccccccccCC--CCCcEecCCCCCCccccCCCCCCCCCC-cCCCCcccccccc
Q psy17723 35 PESDKCKACDRDTS--AGEMIQCGKCVRYLHPACLDLPGEMLP-HMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~~~~~~~~-~~~~~~W~C~~C~ 88 (145)
..+.+|.+|+.... .+.||+|+.|.+.||++|+.+++.... .++.+.|+|+.|.
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 45779999998864 368999999999999999999874211 2567899999884
No 54
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.97 E-value=6.3e-11 Score=76.91 Aligned_cols=48 Identities=19% Similarity=0.418 Sum_probs=39.8
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCCC---CCCccccccccchh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKIP---TVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~p---~~~W~C~~C~~~~~ 137 (145)
+| +|++..+ ++.||.||.|+.|||..|++++..+ ...|+|+.|.....
T Consensus 14 ~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred EE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 66 8998764 6889999999999999999965543 36899999997754
No 55
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.94 E-value=2.6e-10 Score=70.97 Aligned_cols=49 Identities=22% Similarity=0.493 Sum_probs=39.3
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCCC---CCCccccccccchh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKIP---TVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~p---~~~W~C~~C~~~~~ 137 (145)
+|.+|+++.+ ++.||.||.|+.|||..|++++..+ ...|+|+.|+.++.
T Consensus 8 ~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 4558888754 5789999999999999999976553 36899999987543
No 56
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.93 E-value=4.3e-10 Score=85.01 Aligned_cols=48 Identities=27% Similarity=0.708 Sum_probs=42.3
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.+++.|.+|+.+| +||.|++|.++||..|+.|++. .++.+.|+|+.|.
T Consensus 5 ~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~---~~p~~~W~C~~C~ 52 (207)
T 3u5n_A 5 PNEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLL---SFPSGDWICTFCR 52 (207)
T ss_dssp SSCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCS---SCCSSCCCCTTTS
T ss_pred CCCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCC---CCCCCCEEeCcee
Confidence 4688999999998 8999999999999999999874 4557899999885
No 57
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.93 E-value=1.6e-10 Score=78.97 Aligned_cols=50 Identities=24% Similarity=0.585 Sum_probs=41.1
Q ss_pred cCccccccc-cCCCceecC-CcccccccccccCCC--------CCCCCccccccccchhh
Q psy17723 89 SCVACEKAQ-DDDKMLFCD-LCDRGYHNYCIGLDK--------IPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 89 ~C~vC~~~~-~~~~ll~Cd-~C~~~yH~~Cl~l~~--------~p~~~W~C~~C~~~~~~ 138 (145)
.|.+|+++. +++.||.|| .|+.|||..|++|+. .|++.|+|+.|..+...
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~ 64 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEG 64 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTT
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCC
Confidence 566888873 356899998 999999999999765 47789999999977653
No 58
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.92 E-value=2e-10 Score=74.38 Aligned_cols=49 Identities=20% Similarity=0.461 Sum_probs=41.2
Q ss_pred cCccccccccCCCceecC--CcccccccccccCCCCCC-------CCccccccccchhh
Q psy17723 89 SCVACEKAQDDDKMLFCD--LCDRGYHNYCIGLDKIPT-------VGLVFTLKKKKNKK 138 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd--~C~~~yH~~Cl~l~~~p~-------~~W~C~~C~~~~~~ 138 (145)
+| +|++.++.+.||.|| .|..|||..|++|+..+. ..|+|+.|+..+++
T Consensus 18 ~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 18 RC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred Ee-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 67 899987778999999 999999999999776552 58999999876543
No 59
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.92 E-value=3.9e-10 Score=71.27 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=38.3
Q ss_pred cCccccccccCCCceecCCcccccccccccCCCC-CCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDKI-PTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~~-p~~~W~C~~C~~~ 135 (145)
+| +|++..+++.||.||.|..|||..|++++.. ..+.|+|+.|...
T Consensus 21 ~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 21 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp CS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred Ee-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 66 8998877778999999999999999996542 3468999999753
No 60
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.92 E-value=3.6e-10 Score=72.48 Aligned_cols=51 Identities=22% Similarity=0.632 Sum_probs=42.1
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.+...|.+|+...+.+.||.|+.|..+||..|++++.... +...|+|+.|.
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~---~~~~w~C~~C~ 66 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPP---EEMQWFCPKCA 66 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCC---SSSCCCCTTTH
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCC---CCCCEEChhcc
Confidence 3466899999987767899999999999999999976432 34699999873
No 61
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.88 E-value=8.4e-10 Score=76.26 Aligned_cols=47 Identities=26% Similarity=0.630 Sum_probs=40.6
Q ss_pred ccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 39 KCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.|.+|+..++.+.||.|+.|.++||++||++++. .++.+.|+|+.|.
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~---~~P~g~W~C~~C~ 106 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVA---EPPEGSWSCHLCW 106 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCS---SCCSSCCCCHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCcc---CCCCCCeECcccc
Confidence 6889998877789999999999999999999874 4557899999773
No 62
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.88 E-value=1.4e-10 Score=74.70 Aligned_cols=48 Identities=19% Similarity=0.539 Sum_probs=40.4
Q ss_pred cCccccccccCCCceecCCcccccccccccCCCCC-------CCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDKIP-------TVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~~p-------~~~W~C~~C~~~~~ 137 (145)
+| +|++..+++.||.||.|+.|||..|++|+..+ ...|+|+.|...+.
T Consensus 18 ~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 18 YC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp CS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred EE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 66 89988877799999999999999999976543 47899999987654
No 63
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.87 E-value=5.5e-10 Score=66.92 Aligned_cols=45 Identities=22% Similarity=0.384 Sum_probs=37.5
Q ss_pred cCccccccccCCCceecCCcccccccccccCCCC-CCCCcccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDKI-PTVGLVFTLKKK 134 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~~-p~~~W~C~~C~~ 134 (145)
+| +|+++.+++.||.||.|..|||..|++++.. ....|+|+.|+.
T Consensus 6 ~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 6 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp CS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EE-EeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 45 8998877789999999999999999996553 246899999964
No 64
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.86 E-value=8.6e-10 Score=79.00 Aligned_cols=45 Identities=18% Similarity=0.461 Sum_probs=38.8
Q ss_pred cCccccccccCCCceecCCccccccccccc--CC-----C--CCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LD-----K--IPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~-----~--~p~~~W~C~~C~~~~ 136 (145)
+|.+|+. ++.||.||.|+++||..||. +. + .|.+.|.|+.|..+.
T Consensus 65 ~C~vC~~---GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 65 QCRWCAE---GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp SCSSSCC---CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred eecccCC---CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 7889997 67899999999999999997 32 3 489999999999763
No 65
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.86 E-value=1.5e-09 Score=81.15 Aligned_cols=46 Identities=22% Similarity=0.674 Sum_probs=40.7
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
++.|.+|+.+| +||.|++|.++||..|+.+++. .++.+.|+|+.|.
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~---~~p~g~W~C~~C~ 47 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQ---DVPGEEWSCSLCH 47 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCS---SCCCTTCCTTTTS
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcc---cCCCCCCCCcCcc
Confidence 67899999988 8999999999999999999774 4457899999984
No 66
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.85 E-value=7.6e-10 Score=69.83 Aligned_cols=46 Identities=22% Similarity=0.456 Sum_probs=37.6
Q ss_pred cCccccccccCCCceecC--CcccccccccccCCCCCC------CCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCD--LCDRGYHNYCIGLDKIPT------VGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd--~C~~~yH~~Cl~l~~~p~------~~W~C~~C~~~ 135 (145)
+| +|+...+.+.||.|| .|..|||..|++++..|. ..|+|+.|+..
T Consensus 12 ~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 12 RC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred Ee-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 56 899887788999999 499999999999755442 36999999754
No 67
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.84 E-value=2.5e-09 Score=73.66 Aligned_cols=48 Identities=31% Similarity=0.726 Sum_probs=40.0
Q ss_pred cccccccccC-CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 38 DKCKACDRDT-SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 38 ~~C~~C~~~~-~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.+|.+|+..+ +.+.||.|+.|.++||++||++++. .++.+.|+|+.|+
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~---~~P~~~W~C~~C~ 110 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLT---RMPKGMWICQICR 110 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCS---SCCSSCCCCTTTS
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCC---CCCCCCeECCCCC
Confidence 3788998765 3478999999999999999999864 4557899999884
No 68
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.84 E-value=2e-09 Score=82.43 Aligned_cols=49 Identities=24% Similarity=0.691 Sum_probs=38.3
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCC-cccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLY-DWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 88 (145)
+..|.+|+..++.+.||.|+.|.++||+.||+|++. .++.+ .|+|+.|.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~---~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCC---SCCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcc---cCCCCCCCCCcCCc
Confidence 457999998877789999999999999999999875 34466 99999883
No 69
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.84 E-value=3.5e-10 Score=70.90 Aligned_cols=46 Identities=20% Similarity=0.537 Sum_probs=38.2
Q ss_pred cCccccccc-cCCCceecC-CcccccccccccCCC--------CCCCCcccccccc
Q psy17723 89 SCVACEKAQ-DDDKMLFCD-LCDRGYHNYCIGLDK--------IPTVGLVFTLKKK 134 (145)
Q Consensus 89 ~C~vC~~~~-~~~~ll~Cd-~C~~~yH~~Cl~l~~--------~p~~~W~C~~C~~ 134 (145)
.|.+|+++. ++..||.|| .|++|||..|++|+. .|.+.|+|+.|.+
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHHC
T ss_pred cCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCccC
Confidence 566889874 466889999 999999999999654 4788999999963
No 70
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.81 E-value=1.1e-09 Score=75.66 Aligned_cols=93 Identities=22% Similarity=0.402 Sum_probs=54.6
Q ss_pred cccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCc------CCCCcccccccccCcccc---ccc-cCCCceecCC
Q psy17723 38 DKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPH------MKLYDWQCSDCKSCVACE---KAQ-DDDKMLFCDL 107 (145)
Q Consensus 38 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~------~~~~~W~C~~C~~C~vC~---~~~-~~~~ll~Cd~ 107 (145)
.+|.+|+.. .|+.|...||+.|++.+...-.. ....-+.|..|.+|..|. ... .+..||.|+.
T Consensus 8 ~~C~~C~~~-------~C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~ 80 (117)
T 4bbq_A 8 RKCKACVQG-------ECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCI 80 (117)
T ss_dssp SCSHHHHSC-------CCSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEETT
T ss_pred CcCcCcCCc-------CCCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcceEEeee
Confidence 356666543 29999999999999876432111 011112222233333333 322 2456889999
Q ss_pred cccccccccccCC--CCC----CCCccccccccchh
Q psy17723 108 CDRGYHNYCIGLD--KIP----TVGLVFTLKKKKNK 137 (145)
Q Consensus 108 C~~~yH~~Cl~l~--~~p----~~~W~C~~C~~~~~ 137 (145)
|+.+||..|+++. .++ ...|+|+.|..+..
T Consensus 81 C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~~ 116 (117)
T 4bbq_A 81 CNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDS 116 (117)
T ss_dssp TCCEECGGGCCSCCCCEECSSSSSEEECTTTC----
T ss_pred cCCeEECCCCCCCccccccccCCCCeECCCCcCCCC
Confidence 9999999999842 122 23599999997753
No 71
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.80 E-value=1.3e-09 Score=69.46 Aligned_cols=47 Identities=28% Similarity=0.569 Sum_probs=37.6
Q ss_pred cCccccccccC-CCceecCCcccccccccccCCCC--CCCCccccccccch
Q psy17723 89 SCVACEKAQDD-DKMLFCDLCDRGYHNYCIGLDKI--PTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~-~~ll~Cd~C~~~yH~~Cl~l~~~--p~~~W~C~~C~~~~ 136 (145)
+| +|++..+. ..||.||.|..|||..|+++... ....|+|+.|..+.
T Consensus 18 ~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred Ee-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 66 79987544 47999999999999999996542 34789999998643
No 72
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.76 E-value=1.4e-09 Score=65.09 Aligned_cols=44 Identities=18% Similarity=0.428 Sum_probs=35.7
Q ss_pred Ccccccccc-CCCceecC-CcccccccccccCCCCC--CCCccccccc
Q psy17723 90 CVACEKAQD-DDKMLFCD-LCDRGYHNYCIGLDKIP--TVGLVFTLKK 133 (145)
Q Consensus 90 C~vC~~~~~-~~~ll~Cd-~C~~~yH~~Cl~l~~~p--~~~W~C~~C~ 133 (145)
|-+|+++.+ ++.||.|| .|+.|||..|++|+..+ ...|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 448888764 56799999 89999999999976543 4789999985
No 73
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.74 E-value=4e-08 Score=65.34 Aligned_cols=46 Identities=35% Similarity=0.855 Sum_probs=35.9
Q ss_pred cccccccccccCCCCCcEecCC--CC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGK--CV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
....| +|++... ..||.|+. |. .+||+.|+++. ..+...|+|+.|.
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~-----~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-----TKPRGKWFCPRCS 83 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCS-----SCCCSSCCCTTTC
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCCcC-----cCCCCCEECcCcc
Confidence 45677 9998653 48999999 77 79999999974 2335799999883
No 74
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.69 E-value=3.7e-08 Score=62.63 Aligned_cols=46 Identities=35% Similarity=0.855 Sum_probs=36.0
Q ss_pred cccccccccccCCCCCcEecCC--CC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGK--CV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
+...| +|++... ..||.|+. |. .+||+.|+++. .++.+.|+|+.|.
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~-----~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-----TKPRGKWFCPRCS 63 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTTCS-----SCCSSCCCCTTTS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCCcC-----cCCCCCEECCCCC
Confidence 45678 8998653 48999999 77 79999999974 3345799999883
No 75
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.67 E-value=2.9e-08 Score=66.78 Aligned_cols=46 Identities=26% Similarity=0.741 Sum_probs=37.3
Q ss_pred cccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 38 DKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 38 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
..| +|+...+.+.||.|+.|..+||..|++++... ++ ..|+|+.|.
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~---~p-~~w~C~~C~ 74 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQH---IP-DTYLCERCQ 74 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTS---CC-SSBCCTTTS
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccC---CC-CCEECCCCc
Confidence 457 78888777899999999999999999997543 33 379999873
No 76
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.61 E-value=3.2e-09 Score=77.94 Aligned_cols=48 Identities=23% Similarity=0.508 Sum_probs=39.5
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCC---CCCCccccccccchh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKI---PTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~---p~~~W~C~~C~~~~~ 137 (145)
+| +|+++++ ++.||.||.|++|||..|+++... ..+.|+|+.|+....
T Consensus 10 ~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 10 YC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred Ee-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 67 8898754 678999999999999999996543 367899999997654
No 77
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.49 E-value=6.4e-08 Score=64.21 Aligned_cols=46 Identities=30% Similarity=0.718 Sum_probs=35.5
Q ss_pred cccccccccccCCCCCcEecCCCC---CCccccCCCCCCCCCCcCCCCcccccc-cc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCV---RYLHPACLDLPGEMLPHMKLYDWQCSD-CK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~-C~ 88 (145)
....| +|+.... ++||.|+.|. .+||+.|+++.. .+.+.|+|+. |.
T Consensus 25 ~~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVgl~~-----~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 25 EEVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVGLKQ-----APKGKWYCSKDCK 74 (90)
T ss_dssp CSCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSSCSS-----CTTSCCCSSHHHH
T ss_pred CCcEE-EeCCCCC-CCEEEecCCCCccccCcCccCCCCc-----CCCCCccCChhhc
Confidence 35578 8997654 3799999966 899999999743 3357999998 73
No 78
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.49 E-value=3.1e-08 Score=60.92 Aligned_cols=45 Identities=33% Similarity=0.848 Sum_probs=35.2
Q ss_pred ccccccccccCCCCCcEecCC--CC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGK--CV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|++... +.||.|+. |. .+||+.|+++. .++.+.|+|+.|.
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~-----~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-----TKPRGKWFCPRCS 57 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCS-----SCCSSCCCCHHHH
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCCCC-----cCCCCCEECcCcc
Confidence 4567 8998653 58999999 66 89999999963 3345799999873
No 79
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.47 E-value=1.3e-07 Score=59.50 Aligned_cols=48 Identities=21% Similarity=0.590 Sum_probs=38.8
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
.....| +|+...+.+.||.|+.|..+||..|+++.... + ...|+|+.|
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~---~-~~~~~C~~C 64 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSN---V-PEVFVCQKC 64 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTS---C-CSSCCCHHH
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCccc---C-CCcEECCCC
Confidence 345578 99998777789999999999999999997542 2 258999877
No 80
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.46 E-value=3.9e-08 Score=60.29 Aligned_cols=45 Identities=36% Similarity=0.863 Sum_probs=35.1
Q ss_pred ccccccccccCCCCCcEecCC--CC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGK--CV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|++... +.||.|+. |. .+||..|+++. ..+.+.|+|+.|.
T Consensus 9 ~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvgl~-----~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 9 PTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVDLT-----TKPKGKWFCPRCV 56 (59)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCS-----SCCSSCCCCHHHH
T ss_pred CcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCCcc-----cCCCCCEECcCcc
Confidence 4567 9998643 48999999 77 79999999974 3335799999873
No 81
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.44 E-value=1.5e-08 Score=71.45 Aligned_cols=86 Identities=19% Similarity=0.485 Sum_probs=57.1
Q ss_pred ccccccccccCC-----C------CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceec
Q psy17723 37 SDKCKACDRDTS-----A------GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFC 105 (145)
Q Consensus 37 ~~~C~~C~~~~~-----~------~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~C 105 (145)
...|..|+..-. . =..+.|..|...|+..=..... .... .+|.+|+. +++|+.|
T Consensus 8 ~~~Ct~Cg~~~~~~~~~~~~~HPll~v~~C~~C~~~y~~~~~~~d~------Dg~~------~~C~vC~d---GG~LlcC 72 (129)
T 3ql9_A 8 IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDS------DGMD------EQCRWCAE---GGNLICC 72 (129)
T ss_dssp SCBCTTTCCBCCCCBTTTEEECTTTCCEEEHHHHHHHHHSCCCBCT------TSCB------SSCTTTCC---CSEEEEC
T ss_pred ceEeccCCCCCcccCCCccccCCCcCceeCHhHHhhhhccccccCC------CCCC------CcCeecCC---CCeeEec
Confidence 446777776552 0 2356677776666543222110 0111 16888887 6789999
Q ss_pred CCccccccccccc-------CCCC--CCCCccccccccchh
Q psy17723 106 DLCDRGYHNYCIG-------LDKI--PTVGLVFTLKKKKNK 137 (145)
Q Consensus 106 d~C~~~yH~~Cl~-------l~~~--p~~~W~C~~C~~~~~ 137 (145)
|.|.++||..|+. +.++ |.+.|+|..|.....
T Consensus 73 d~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl 113 (129)
T 3ql9_A 73 DFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPL 113 (129)
T ss_dssp SSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGG
T ss_pred CCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHH
Confidence 9999999999997 3344 889999999987644
No 82
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.44 E-value=1.2e-08 Score=72.96 Aligned_cols=51 Identities=20% Similarity=0.453 Sum_probs=42.1
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCCCC--CCc--CCCCccccccc
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEM--LPH--MKLYDWQCSDC 87 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~--~~~--~~~~~W~C~~C 87 (145)
..+++.|.+|+.+| +||.|+.|.+.||..|+.+++.. +.. .+.+.|+|+.|
T Consensus 60 Dg~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C 114 (142)
T 2lbm_A 60 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYIC 114 (142)
T ss_dssp TSCBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTT
T ss_pred CCCCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecc
Confidence 45789999999999 99999999999999999987641 111 25789999977
No 83
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.41 E-value=6.3e-08 Score=59.96 Aligned_cols=45 Identities=31% Similarity=0.854 Sum_probs=35.1
Q ss_pred ccccccccccCCCCCcEecCC--CC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGK--CV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|++... ..||.|+. |. .+||+.|+++.. .+.+.|+|+.|.
T Consensus 11 ~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvgl~~-----~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 11 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVSLTY-----KPKGKWYCPKCR 58 (62)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCSS-----CCSSCCCCHHHH
T ss_pred CcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCCcCc-----CCCCCEECcCcc
Confidence 4577 9998643 48999999 55 999999999742 335799999873
No 84
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.39 E-value=1.6e-07 Score=58.13 Aligned_cols=51 Identities=22% Similarity=0.622 Sum_probs=39.8
Q ss_pred cccccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 36 ESDKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
+...|.+|+...+ ...||.|+.|..+||..|+++...... ....|+|+.|.
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~--~~~~~~C~~C~ 56 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAE--HIKQYKCPSCS 56 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGG--GCSSCCCHHHH
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhc--CCCcEECCCCc
Confidence 4668999998864 478999999999999999999754322 12589998773
No 85
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.37 E-value=3.2e-08 Score=83.44 Aligned_cols=48 Identities=21% Similarity=0.479 Sum_probs=40.1
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCCCC---CCccccccccchh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKIPT---VGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~p~---~~W~C~~C~~~~~ 137 (145)
+| +|+++.+ ++.||.||.|+.|||..|++++..+. +.|+|+.|.....
T Consensus 39 yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 39 YC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHG 90 (488)
T ss_dssp ET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHHC
T ss_pred EE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCcC
Confidence 56 8998754 78899999999999999999776653 5799999997654
No 86
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.27 E-value=1.3e-07 Score=70.32 Aligned_cols=49 Identities=35% Similarity=0.682 Sum_probs=37.8
Q ss_pred cCccccccccCC----CceecCCcccccccccccCCC--------CCC-CCccccccccchh
Q psy17723 89 SCVACEKAQDDD----KMLFCDLCDRGYHNYCIGLDK--------IPT-VGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~----~ll~Cd~C~~~yH~~Cl~l~~--------~p~-~~W~C~~C~~~~~ 137 (145)
+|.+|++..+++ .||.||.|++|||..|++++. .|+ ..|+|+.|+....
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 566888765443 499999999999999998653 232 4799999997654
No 87
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.22 E-value=5.2e-08 Score=81.37 Aligned_cols=50 Identities=20% Similarity=0.414 Sum_probs=40.6
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCCCCC---CCCccccccccchhhh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLDKIP---TVGLVFTLKKKKNKKK 139 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~~~p---~~~W~C~~C~~~~~~~ 139 (145)
+| +|+++.+ ++.|+.||.|+.|||..|++++..+ .+.|+|+.|.....+.
T Consensus 7 yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~~ 60 (447)
T 3kv4_A 7 YC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60 (447)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCCC
T ss_pred EE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCCc
Confidence 56 8998754 6889999999999999999976543 2679999999775533
No 88
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.20 E-value=1.4e-06 Score=55.14 Aligned_cols=48 Identities=19% Similarity=0.581 Sum_probs=37.2
Q ss_pred ccccccccccCCC-CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSA-GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~-~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|+...+. +.||.|+.|..+||..|+++.... .+ ...|+|+.|.
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~--~~-~~~~~C~~C~ 64 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNAD--AL-PSKFLCFRCI 64 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTS--CC-CSCCCCHHHH
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccc--cC-CCcEECCCcc
Confidence 4578 79988654 579999999999999999986431 12 3689998773
No 89
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.17 E-value=1.2e-06 Score=54.89 Aligned_cols=51 Identities=24% Similarity=0.546 Sum_probs=37.5
Q ss_pred ccccccccccCCCCCcEecCC--CCCCccccCCCCCCCCCCcC-CCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGK--CVRYLHPACLDLPGEMLPHM-KLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~--C~~~~H~~Cl~~~~~~~~~~-~~~~W~C~~C~ 88 (145)
...| +|+...+.+.||.|++ |..+||..|+++........ ....|+|+.|+
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 4567 8988877789999995 99999999999864332211 12479999774
No 90
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.17 E-value=5.5e-08 Score=60.80 Aligned_cols=53 Identities=19% Similarity=0.572 Sum_probs=39.5
Q ss_pred cccccccccccCC-CCCcEecC-CCCCCccccCCCCCCCCCCc---CCCCcccccccc
Q psy17723 36 ESDKCKACDRDTS-AGEMIQCG-KCVRYLHPACLDLPGEMLPH---MKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~-~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~---~~~~~W~C~~C~ 88 (145)
+...|.+|+...+ ...||.|+ .|..+||..|+++....... .+...|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 4568999999854 47899999 99999999999986432111 134699999874
No 91
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.14 E-value=1.5e-06 Score=55.89 Aligned_cols=51 Identities=25% Similarity=0.676 Sum_probs=39.2
Q ss_pred cccccccccccCCCCCcEecC--CCCCCccccCCCCCCCCCC---cCCCCcccccccc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCG--KCVRYLHPACLDLPGEMLP---HMKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~~~~~~~~---~~~~~~W~C~~C~ 88 (145)
....| +|+...+...||.|+ .|..+||..|+++...... .. ...|+|+.|.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~-~~~~~C~~C~ 70 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPL-PESFYCEICR 70 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCS-CSSCCCHHHH
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccC-CCCEECCCCC
Confidence 35678 899986668999999 9999999999998654321 22 3589999773
No 92
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.14 E-value=1.2e-06 Score=52.17 Aligned_cols=43 Identities=21% Similarity=0.662 Sum_probs=35.0
Q ss_pred cccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 42 ACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 42 ~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
+|+...+...||.|+.|..+||..|+++... .+ ...|+|+.|.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~---~~-~~~~~C~~C~ 50 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKS---NV-PEVFVCQKCR 50 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGG---GC-CSSCCCHHHH
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcc---cC-CCcEECcCCC
Confidence 7888777679999999999999999998653 22 3589999773
No 93
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.14 E-value=1.7e-07 Score=60.00 Aligned_cols=51 Identities=22% Similarity=0.591 Sum_probs=38.1
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcC--CCCccccccc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHM--KLYDWQCSDC 87 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~--~~~~W~C~~C 87 (145)
+...| +|+...+...||.|+.|..+||..|+++.......+ ....|+|+.|
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C 67 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 67 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHH
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCC
Confidence 34567 899988767999999999999999999853211101 2358999877
No 94
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.07 E-value=9.7e-07 Score=52.55 Aligned_cols=47 Identities=26% Similarity=0.704 Sum_probs=35.6
Q ss_pred ccccccccCC-CCCcEecC-CCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 39 KCKACDRDTS-AGEMIQCG-KCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~-~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
.|.+|+...+ ...||.|+ .|..+||..|+++.... .....|+|+.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~---~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEM---AENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHH---HHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccc---cCCCCEECCCCC
Confidence 4667888764 47799999 89999999999986421 113689999883
No 95
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.07 E-value=1.6e-07 Score=66.10 Aligned_cols=51 Identities=20% Similarity=0.489 Sum_probs=40.8
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCCCC--CCcC--CCCccccccc
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEM--LPHM--KLYDWQCSDC 87 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~--~~~~--~~~~W~C~~C 87 (145)
..+++.|.+|+++| +|+.|+.|.+.||..|+.+++.. +..+ +.+.|+|..|
T Consensus 54 Dg~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C 108 (129)
T 3ql9_A 54 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYIC 108 (129)
T ss_dssp TSCBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTT
T ss_pred CCCCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCc
Confidence 45788999999999 99999999999999999875321 1122 4679999877
No 96
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=1.2e-06 Score=55.33 Aligned_cols=45 Identities=29% Similarity=0.764 Sum_probs=34.8
Q ss_pred ccccccccccCCCCCcEecCCCC---CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCV---RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|++... +.||.|+.|+ .+||..|+++.. .+...|+|+.|.
T Consensus 6 ~~yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvgl~~-----~p~~~w~Cp~C~ 53 (70)
T 1x4i_A 6 SGYC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVGLTE-----APKGKWYCPQCT 53 (70)
T ss_dssp CCCS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHTCSS-----CCSSCCCCHHHH
T ss_pred CeEE-EcCCCCC-CCEeEeCCCCCCccCCcccccccCc-----CCCCCEECCCCC
Confidence 4567 5988753 4999999974 899999999853 335799999873
No 97
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.03 E-value=4e-07 Score=61.96 Aligned_cols=52 Identities=21% Similarity=0.584 Sum_probs=38.7
Q ss_pred ccccccccccCC-CCCcEecC-CCCCCccccCCCCCCCCCCc---CCCCcccccccc
Q psy17723 37 SDKCKACDRDTS-AGEMIQCG-KCVRYLHPACLDLPGEMLPH---MKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~-~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~---~~~~~W~C~~C~ 88 (145)
.-.|.+|+...+ ...||.|+ .|..+||..|+++....... .+...|+|+.|.
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~ 59 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCL 59 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECcccc
Confidence 457999999843 36899998 99999999999986422111 134699999874
No 98
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.99 E-value=1.4e-06 Score=73.72 Aligned_cols=41 Identities=22% Similarity=0.402 Sum_probs=33.3
Q ss_pred ccCCCceecCCcccccccccccCCCCC---CCCccccccccchh
Q psy17723 97 QDDDKMLFCDLCDRGYHNYCIGLDKIP---TVGLVFTLKKKKNK 137 (145)
Q Consensus 97 ~~~~~ll~Cd~C~~~yH~~Cl~l~~~p---~~~W~C~~C~~~~~ 137 (145)
+.+..|+.||.|+.|||..|++++..+ .+.|+||.|.....
T Consensus 53 n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~g 96 (528)
T 3pur_A 53 KNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTG 96 (528)
T ss_dssp TSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHC
T ss_pred CcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCC
Confidence 346788999999999999999976543 36899999997644
No 99
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.95 E-value=2.8e-06 Score=55.20 Aligned_cols=54 Identities=30% Similarity=0.697 Sum_probs=40.7
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCC--------CCCCC-cCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLP--------GEMLP-HMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~--------~~~~~-~~~~~~W~C~~C 87 (145)
++.+++.|.||..-. .+.|+-|..|++.||..||... .+++. ......|.|+.|
T Consensus 11 ~~~~D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~C 73 (89)
T 1wil_A 11 PVVNDEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYC 73 (89)
T ss_dssp CCCCSCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTT
T ss_pred CCCCCcccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCcccccc
Confidence 456899999999544 4599999999999999998663 22222 224679999977
No 100
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.87 E-value=3.7e-06 Score=54.11 Aligned_cols=48 Identities=27% Similarity=0.731 Sum_probs=36.7
Q ss_pred ccccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 37 SDKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 37 ~~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
...| +|+...+ ...||.|+.|..+||..|+++..... .....|+|+.|
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~--~~~~~~~C~~C 60 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENA--VDIDIYHCPDC 60 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHH--TTCSBBCCTTT
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccc--cCCCeEECCCc
Confidence 4466 9999865 57999999999999999999864221 11358988877
No 101
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.80 E-value=1.7e-06 Score=63.28 Aligned_cols=50 Identities=18% Similarity=0.566 Sum_probs=38.4
Q ss_pred cccccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 36 ESDKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 36 ~~~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
+...| +|+..++ .+.||.|+.|..+||..|++..... ......|+|+.|.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~--~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSE--AELIDEYVCPQCQ 57 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHH--HTTCSSCCCHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhh--ccCccCeecCCCc
Confidence 46789 9999864 4679999999999999999875321 1124699999774
No 102
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.79 E-value=5.6e-06 Score=52.78 Aligned_cols=47 Identities=26% Similarity=0.716 Sum_probs=35.7
Q ss_pred cccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 38 DKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 38 ~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
..| +|+...+ ...||.|+.|..+||..|+++...... ....|+|+.|
T Consensus 11 ~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~--~~~~~~C~~C 58 (75)
T 3kqi_A 11 VYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAP--DIDIYHCPNC 58 (75)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGG--GBSSCCCHHH
T ss_pred eEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccC--CCCEEECCCC
Confidence 345 8998754 478999999999999999998654322 1247988866
No 103
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.54 E-value=3.5e-05 Score=50.04 Aligned_cols=44 Identities=20% Similarity=0.472 Sum_probs=35.3
Q ss_pred cCccccccccCCCceecCCccccccccccc--------------CCCCCCCCccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--------------LDKIPTVGLVFTLKK 133 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--------------l~~~p~~~W~C~~C~ 133 (145)
.|.||.... .+.++-|..|.+.||..||. +.+.++..|.|+.|.
T Consensus 17 ~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 17 MCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred ccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 677888644 67889999999999999993 233467789999995
No 104
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.42 E-value=1.5e-05 Score=59.11 Aligned_cols=52 Identities=33% Similarity=0.820 Sum_probs=37.2
Q ss_pred ccccccccccCCCC----CcEecCCCCCCccccCCCCCCCCCCcC---C-CCcccccccc
Q psy17723 37 SDKCKACDRDTSAG----EMIQCGKCVRYLHPACLDLPGEMLPHM---K-LYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~~~----~ll~C~~C~~~~H~~Cl~~~~~~~~~~---~-~~~W~C~~C~ 88 (145)
...|.+|+..-+.+ .||.|+.|..+||..|+++..+....+ + ...|.|+.|.
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~ 61 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTC
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCC
Confidence 34799999876553 499999999999999999853211111 1 1379999884
No 105
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.01 E-value=8.8e-05 Score=62.54 Aligned_cols=49 Identities=20% Similarity=0.613 Sum_probs=37.2
Q ss_pred ccccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 37 SDKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 37 ~~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
...| +|+...+ ...||.|+.|..+||..|++....... ....|+|+.|.
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~--~~~~~~C~~C~ 86 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAV--DIDLYHCPNCA 86 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGG--GEEEBCCHHHH
T ss_pred CeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCccccc--CCCEEECCCCc
Confidence 3456 9998754 578999999999999999998643211 12589999884
No 106
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.84 E-value=3.7e-05 Score=52.71 Aligned_cols=92 Identities=20% Similarity=0.455 Sum_probs=63.4
Q ss_pred cccccccccccCCC----CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc------------------cCccc
Q psy17723 36 ESDKCKACDRDTSA----GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK------------------SCVAC 93 (145)
Q Consensus 36 ~~~~C~~C~~~~~~----~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~------------------~C~vC 93 (145)
++..|.+|.+.-.. ...+.-..|+..||..|+..++.. .-.||.|+ .|.+|
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC 78 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKKINHKRYHPIYIGSGTVSCPIC 78 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT-------CSBCTTTCCBCTTTCEEECBCSSSSCBCTTT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh-------CCCCCCCCCcCccccccccccCCCCCCCCCC
Confidence 46689999876421 244455689999999999876431 23688775 78888
Q ss_pred ccccc----CCCceecCCccccccccccc--CCCCCCCCccccccccchhh
Q psy17723 94 EKAQD----DDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 94 ~~~~~----~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~ 138 (145)
...-. ....+....|+..||..|+. +.. ...||.|+..-.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 79 MDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKINH 125 (133)
T ss_dssp CCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCCBCCG
T ss_pred CCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCCcCCh
Confidence 76432 23444566899999999997 432 2489999976544
No 107
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.78 E-value=0.00053 Score=58.12 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=29.4
Q ss_pred CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 50 GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 50 ~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
..||.||.|..+||..|++....... ....|+||.|.
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~--~~~~y~Cp~C~ 92 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYY--LYEKFFCPKCV 92 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTT--TEEECCCTTTH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhc--CCCeEECcCCc
Confidence 57999999999999999998653222 23589999884
No 108
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.58 E-value=0.00074 Score=45.96 Aligned_cols=39 Identities=31% Similarity=0.798 Sum_probs=29.3
Q ss_pred CCcEecCCCCCCccccCCCCCCCCCC-cCCCCcccccccc
Q psy17723 50 GEMIQCGKCVRYLHPACLDLPGEMLP-HMKLYDWQCSDCK 88 (145)
Q Consensus 50 ~~ll~C~~C~~~~H~~Cl~~~~~~~~-~~~~~~W~C~~C~ 88 (145)
..||.|+.|..+||..|+++..+... ......|.|+.|.
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~ 112 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCY 112 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCc
Confidence 56999999999999999998754322 1223469999773
No 109
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=96.26 E-value=0.00039 Score=50.33 Aligned_cols=86 Identities=17% Similarity=0.327 Sum_probs=58.1
Q ss_pred cccccccccccCCC-----CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceecC--Cc
Q psy17723 36 ESDKCKACDRDTSA-----GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFCD--LC 108 (145)
Q Consensus 36 ~~~~C~~C~~~~~~-----~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~Cd--~C 108 (145)
-++.|..|++.... -..+.|..|...|+..-...... .+. .+|.+|+. ++.++.|+ .|
T Consensus 35 ~e~~Ct~CG~~~~~~~HPlf~v~lC~~Ck~~y~e~~f~~DeD------G~~------~yC~wC~~---Gg~l~~Cdn~~C 99 (159)
T 3a1b_A 35 IEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDD------GYQ------SYCTICCG---GREVLMCGNNNC 99 (159)
T ss_dssp GGGSBTTTCCSCCCEECSSBSSEECHHHHHHHHHHTTCBCTT------SSB------SSCTTTSC---CSEEEECSSTTT
T ss_pred ccCcccCCCCcCccccCCCccchhhHHHHHHHhhcccccCCC------CCc------ceeeEecC---CCeEEeeCCCCC
Confidence 37789999875421 34456666666665433332211 111 28889997 67999999 89
Q ss_pred cccccccccc-------CCC-CCCCCccccccccch
Q psy17723 109 DRGYHNYCIG-------LDK-IPTVGLVFTLKKKKN 136 (145)
Q Consensus 109 ~~~yH~~Cl~-------l~~-~p~~~W~C~~C~~~~ 136 (145)
.+.|=..|+. +.. ...+.|.|-.|.++.
T Consensus 100 ~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 100 CRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp CCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 9999999995 222 356789999999875
No 110
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=96.21 E-value=0.0027 Score=46.70 Aligned_cols=46 Identities=17% Similarity=0.400 Sum_probs=31.5
Q ss_pred cCcccccccc-CCCceecCCcccccccccccCC---CCCCC---Cccccccccc
Q psy17723 89 SCVACEKAQD-DDKMLFCDLCDRGYHNYCIGLD---KIPTV---GLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C~~~yH~~Cl~l~---~~p~~---~W~C~~C~~~ 135 (145)
+| .||..++ ...||+|+.|.+|||..|+... -+|-. .+.|..|...
T Consensus 7 yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 7 SV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred EE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 45 7887654 5678999999999999999721 23422 4679999974
No 111
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.61 E-value=0.00081 Score=56.09 Aligned_cols=48 Identities=21% Similarity=0.561 Sum_probs=35.7
Q ss_pred ccccccccCC-CCCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 39 KCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 39 ~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
+.-+|+...+ .+.||.|+.|..+||..|++...... .....|+|+.|.
T Consensus 6 ~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~--~~~~~y~C~~C~ 54 (447)
T 3kv4_A 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKA--ADIDLYHCPNCE 54 (447)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHH--TTEEECCCHHHH
T ss_pred eEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccc--cCCCEEECCCCc
Confidence 3348988754 57899999999999999999853211 122589999884
No 112
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=95.58 E-value=0.009 Score=37.13 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=28.1
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
....+..|.||...-.....+.=..|+..||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~ 49 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWL 49 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHH
T ss_pred cCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHH
Confidence 344577999998876543444334699999999998764
No 113
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.28 E-value=0.0037 Score=39.96 Aligned_cols=36 Identities=25% Similarity=0.637 Sum_probs=25.6
Q ss_pred ccccccccccccCCC-CCcEecCCC-----CCCccccCCCCCCC
Q psy17723 35 PESDKCKACDRDTSA-GEMIQCGKC-----VRYLHPACLDLPGE 72 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~-~~ll~C~~C-----~~~~H~~Cl~~~~~ 72 (145)
..++.|.||....+. +.|+ .-| .+.||..||..|+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~--~pC~C~Gs~h~fH~~Cl~~Wl~ 54 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLI--TPCHCTGSLHFVHQACLQQWIK 54 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEE--CSSSCCSSSCCEETTHHHHHHH
T ss_pred CCCCCCeEcCccccCCCeeE--eccccCCcCCeeCHHHHHHHHh
Confidence 346799999976643 3444 334 49999999998763
No 114
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=95.28 E-value=0.0069 Score=35.01 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=27.6
Q ss_pred ccccccccccccCCC-CCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSA-GEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~-~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.++..|.+|.+.-.. +..+.-..|+..||..|+..++
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~ 40 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL 40 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHH
Confidence 456789999887644 3344445699999999998765
No 115
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.22 E-value=0.012 Score=43.24 Aligned_cols=44 Identities=20% Similarity=0.570 Sum_probs=28.9
Q ss_pred cccccCCC-CCcEecCCCCCCccccCCCCCCCC-CCcCCCCccccc
Q psy17723 42 ACDRDTSA-GEMIQCGKCVRYLHPACLDLPGEM-LPHMKLYDWQCS 85 (145)
Q Consensus 42 ~C~~~~~~-~~ll~C~~C~~~~H~~Cl~~~~~~-~~~~~~~~W~C~ 85 (145)
.|+..++. ..+|.|..|.++||..|+...... ++....+.+.|.
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~ 54 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCN 54 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECT
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEcc
Confidence 57777754 789999999999999999864322 222234556444
No 116
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=94.91 E-value=0.0081 Score=49.12 Aligned_cols=86 Identities=21% Similarity=0.302 Sum_probs=56.4
Q ss_pred cccccccccccCCC-----CCcEecCCCCCCccccCCCCCCCCCCcCCCCcccccccccCccccccccCCCceecC--Cc
Q psy17723 36 ESDKCKACDRDTSA-----GEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDCKSCVACEKAQDDDKMLFCD--LC 108 (145)
Q Consensus 36 ~~~~C~~C~~~~~~-----~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~ll~Cd--~C 108 (145)
-++.|..|+..... =..+.|..|...|+..=...+ ...+ ..+|.+|+. ++.++.|+ .|
T Consensus 49 ~e~~C~~CG~~~~~~~HPl~~v~lC~~Ck~~y~~~~f~~D--------~DG~----~~yCr~C~~---Gg~l~~Cdn~~C 113 (386)
T 2pv0_B 49 IEDICICCGSLQVHTQHPLFEGGICAPCKDKFLDALFLYD--------DDGY----QSYCSICCS---GETLLICGNPDC 113 (386)
T ss_dssp GGGSBTTTCCSCCCSBCSSBSSBCCHHHHHHHHTTTTCBC--------SSSS----BCSCTTTCC---CSSCEECCSTTC
T ss_pred ccceeCCCCCcCccccCCCcCcchhhHHHHHHhccCcccC--------CCCC----cccceEcCC---CCeEEEeCCCCC
Confidence 36789999876421 234456666666653222211 1112 128889997 57899999 99
Q ss_pred cccccccccc-------CCC-CCCCCccccccccch
Q psy17723 109 DRGYHNYCIG-------LDK-IPTVGLVFTLKKKKN 136 (145)
Q Consensus 109 ~~~yH~~Cl~-------l~~-~p~~~W~C~~C~~~~ 136 (145)
.+.|=..|+. +.. ...+.|.|-.|..+.
T Consensus 114 ~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 114 TRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp CCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 9999999996 222 235789999999874
No 117
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=94.47 E-value=0.0021 Score=44.02 Aligned_cols=37 Identities=38% Similarity=0.989 Sum_probs=26.6
Q ss_pred CcEecCCCCCCccccCCCCCCCCC---CcC-CCCccccccc
Q psy17723 51 EMIQCGKCVRYLHPACLDLPGEML---PHM-KLYDWQCSDC 87 (145)
Q Consensus 51 ~ll~C~~C~~~~H~~Cl~~~~~~~---~~~-~~~~W~C~~C 87 (145)
.||.|+.|..+||..|++...++. ..+ ....|.|+.|
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C 41 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNC 41 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccc
Confidence 489999999999999998864211 111 2347888877
No 118
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.32 E-value=0.0055 Score=37.75 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=28.0
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
....+..|.||...-.....+.-..|+..||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~ 49 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL 49 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHH
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHH
Confidence 344577999999886543444333599999999998754
No 119
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=94.13 E-value=0.0079 Score=36.48 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=27.5
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.||...-.....+.-..|+..||..|+..++
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~ 48 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWL 48 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHH
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHH
Confidence 4567899998765443445556799999999998754
No 120
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=93.85 E-value=0.0069 Score=39.16 Aligned_cols=37 Identities=19% Similarity=0.424 Sum_probs=27.6
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.+|...-..+..+.-..|+..||..|+..++
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl 74 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWL 74 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHH
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHH
Confidence 4567899998776443444445599999999998765
No 121
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=93.75 E-value=0.065 Score=32.95 Aligned_cols=52 Identities=19% Similarity=0.294 Sum_probs=32.6
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
.+..+..|.+|...-....++ .|++.||..|+..++............||.|
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~C 59 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVC 59 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSS
T ss_pred hcccCCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCC
Confidence 344577899999876433332 6899999999988764321111224556644
No 122
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.55 E-value=0.033 Score=32.20 Aligned_cols=48 Identities=21% Similarity=0.360 Sum_probs=32.0
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
....+..|.+|...-....+ ..|+..||..|+..+.... .....||.|
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVI---IECGHNFCKACITRWWEDL----ERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCC---CSSCCCCCHHHHHHHTTSS----CCSCCCSCC
T ss_pred ccccCCCCccCCcccCccEe---CCCCCccCHHHHHHHHHhc----CCCCCCCCC
Confidence 34457789999987744333 3689999999998764321 235567754
No 123
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.39 E-value=0.0057 Score=37.89 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=28.4
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.+|...-.....+....|+..||..|+..++
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~ 57 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 57 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHH
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHH
Confidence 3467899999876555555556699999999998764
No 124
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.06 E-value=0.046 Score=34.38 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=29.0
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGE 72 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~ 72 (145)
..+.|.||..... .-+.|..|+..||..|+..++.
T Consensus 14 ~i~~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~ 48 (74)
T 2ct0_A 14 AVKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQ 48 (74)
T ss_dssp SSCBCSSSCCBCS--SSEECSSSCCEECHHHHHHHST
T ss_pred CCCcCcchhhHcc--cCCccCCCCchhhHHHHHHHHH
Confidence 4578999998874 3468889999999999998764
No 125
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.90 E-value=0.028 Score=34.30 Aligned_cols=34 Identities=12% Similarity=0.291 Sum_probs=24.6
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.||...-... +.- .|+..||..|+..++
T Consensus 13 ~~~~~C~IC~~~~~~~--~~~-~CgH~fC~~Ci~~~~ 46 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP--VSL-PCKHVFCYLCVKGAS 46 (71)
T ss_dssp SSCCBCSSSSSBCSSE--EEE-TTTEEEEHHHHHHCT
T ss_pred CCCCCCccCCcccCCC--EEc-cCCCHHHHHHHHHHH
Confidence 4567899999876322 222 599999999998764
No 126
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.89 E-value=0.039 Score=34.79 Aligned_cols=37 Identities=24% Similarity=0.556 Sum_probs=26.3
Q ss_pred cccccccccccCCC------------CCcEecCCCCCCccccCCCCCCC
Q psy17723 36 ESDKCKACDRDTSA------------GEMIQCGKCVRYLHPACLDLPGE 72 (145)
Q Consensus 36 ~~~~C~~C~~~~~~------------~~ll~C~~C~~~~H~~Cl~~~~~ 72 (145)
.++.|.||...-.. +..+.-..|+..||..|+..++.
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 62 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK 62 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH
Confidence 46678888876532 22444457999999999998764
No 127
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.79 E-value=0.027 Score=35.81 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=29.5
Q ss_pred cCcccccccc-CCCceecCCc---cccccccccc--CCCCCCCCccccccccchhh
Q psy17723 89 SCVACEKAQD-DDKMLFCDLC---DRGYHNYCIG--LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 89 ~C~vC~~~~~-~~~ll~Cd~C---~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~~ 138 (145)
.|.||....+ ++.++.=..| ...||..||. |.. .+...||.|+....-
T Consensus 17 ~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 17 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEFIM 70 (80)
T ss_dssp CCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBCCC
T ss_pred CCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCeeec
Confidence 5667775433 3344431122 3899999997 432 234789999977543
No 128
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=92.35 E-value=0.092 Score=29.99 Aligned_cols=43 Identities=23% Similarity=0.567 Sum_probs=28.5
Q ss_pred cCccccccccC-CCceecCCccccccccccc--CCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDD-DKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~-~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
.|.+|...... +..+.-..|+..||..|+. +.. ...||.|+..
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 7 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred cCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 46677764332 3344445799999999996 332 3579999864
No 129
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.01 E-value=0.091 Score=33.00 Aligned_cols=43 Identities=14% Similarity=0.240 Sum_probs=30.5
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
.|.||...-. .-+.|..|...||..|+. +.... .=.||.|+..
T Consensus 17 ~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 17 ICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp BCSSSCCBCS--SSEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred cCcchhhHcc--cCCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 6778876543 235788999999999997 54332 2579998754
No 130
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.83 E-value=0.048 Score=33.12 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=26.7
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGE 72 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~ 72 (145)
.+..+..|.+|...-.. .+. ..|++.||..|+..++.
T Consensus 16 ~~~~~~~C~IC~~~~~~--~~~-~~CgH~fC~~Ci~~~~~ 52 (73)
T 2ysl_A 16 KLQEEVICPICLDILQK--PVT-IDCGHNFCLKCITQIGE 52 (73)
T ss_dssp CCCCCCBCTTTCSBCSS--EEE-CTTCCEEEHHHHHHHCS
T ss_pred hCccCCEeccCCcccCC--eEE-cCCCChhhHHHHHHHHH
Confidence 44567799999987632 222 28999999999987653
No 131
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.54 E-value=0.035 Score=32.91 Aligned_cols=48 Identities=19% Similarity=0.345 Sum_probs=31.5
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
.+..+..|.+|...-... .+. .|+..||..|+..++.. ......||.|
T Consensus 16 ~~~~~~~C~IC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~~----~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKP-VTI--DCGHNFCLKCITQIGET----SCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCSSC-EEC--TTSSEECHHHHHHHHHH----CSSCCCCSCC
T ss_pred hCccCCCCCcCCchhCCe-EEe--CCCCcchHHHHHHHHHc----CCCCCcCcCC
Confidence 445678999999876432 222 79999999999775421 1234567754
No 132
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.23 E-value=0.038 Score=33.99 Aligned_cols=44 Identities=18% Similarity=0.460 Sum_probs=29.7
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.||.........+..-.|...||..|+. +.. ...||.|+..-
T Consensus 25 ~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 25 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp EETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 566777654444444445699999999997 322 24799998653
No 133
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.10 E-value=0.017 Score=34.62 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=28.0
Q ss_pred CCccccccccccccCCC----CCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSA----GEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~----~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
....+..|.||...-.. ...+.-..|+..||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 53 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL 53 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH
Confidence 34557789999886421 2444556899999999997754
No 134
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=90.96 E-value=0.027 Score=40.66 Aligned_cols=50 Identities=28% Similarity=0.642 Sum_probs=37.3
Q ss_pred ccccccccccccCCCCCcEecC--CCCCCccccCCCCCCCC--CCc-CCCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCG--KCVRYLHPACLDLPGEM--LPH-MKLYDWQCSDC 87 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~~~~~~--~~~-~~~~~W~C~~C 87 (145)
..+..|.+|++++ +|+.|+ .|.+.|-..||...... ... .....|.|--|
T Consensus 77 G~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C 131 (159)
T 3a1b_A 77 GYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 131 (159)
T ss_dssp SSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTT
T ss_pred CCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEec
Confidence 3567899999998 999999 79999999998664432 111 35679966544
No 135
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.88 E-value=0.048 Score=32.64 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=25.7
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
...+..|.+|...-....+ ..|+..||..|+..++
T Consensus 12 ~~~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~ 46 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQ---TECGHRFCESCMAALL 46 (66)
T ss_dssp CCCCEECTTTCCEESSCCC---CSSSCCCCHHHHHHHH
T ss_pred CCcCCCCCCCChHhcCeeE---CCCCCHHHHHHHHHHH
Confidence 3457789999887643333 3789999999998754
No 136
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=90.81 E-value=0.034 Score=31.88 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=27.1
Q ss_pred cccccccccccCC-CCCcEecCCCCCCccccCCCCCC
Q psy17723 36 ESDKCKACDRDTS-AGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 36 ~~~~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..|.+|.+.-. .+..+.-..|+..||..|+..++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 40 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEML 40 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHH
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHH
Confidence 3678999988753 24456667799999999997654
No 137
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=90.80 E-value=0.078 Score=30.25 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=29.0
Q ss_pred cCccccccc-cCCCceecCCccccccccccc--CCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQ-DDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~-~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
.|.||...- +.+..+.--.|+..||..|+. +... ..||.|+..
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 7 GCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp SCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred cCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 466777643 233455666799999999996 3221 679999764
No 138
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.63 E-value=0.049 Score=34.32 Aligned_cols=45 Identities=16% Similarity=0.494 Sum_probs=28.8
Q ss_pred cCccccccccCC-CceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDD-KMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~-~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|......+ ..+.-..|...||..|+. +... -.||.|+..-.
T Consensus 28 ~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~~~ 75 (81)
T 2ecl_A 28 ACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN----NRCPLCQQDWV 75 (81)
T ss_dssp CCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC----CBCTTTCCBCC
T ss_pred cCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC----CCCCCcCCCcc
Confidence 455555432222 234444799999999997 5432 28999997644
No 139
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=90.60 E-value=0.17 Score=31.08 Aligned_cols=45 Identities=18% Similarity=0.328 Sum_probs=28.6
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||.........+.--.|...||..|+. +.. ...||.|+..-.
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 63 (78)
T 2ect_A 17 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSLT 63 (78)
T ss_dssp CCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCCC
T ss_pred CCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCccC
Confidence 455776543333333333599999999986 322 258999987644
No 140
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=90.51 E-value=0.062 Score=32.31 Aligned_cols=45 Identities=13% Similarity=0.277 Sum_probs=28.7
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||......+..+.--.|+..||..|+. +.. ...||.|+..-.
T Consensus 16 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 16 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDIE 62 (69)
T ss_dssp SBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBSC
T ss_pred CCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCcccc
Confidence 455776543333344445699999999996 322 235999987643
No 141
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=90.13 E-value=0.3 Score=35.12 Aligned_cols=96 Identities=21% Similarity=0.299 Sum_probs=56.1
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCCC-----CCCCCcCCCCccccccc------ccCccccccccCCCcee
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLP-----GEMLPHMKLYDWQCSDC------KSCVACEKAQDDDKMLF 104 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~-----~~~~~~~~~~~W~C~~C------~~C~vC~~~~~~~~ll~ 104 (145)
....|..|+..-....++.- -++.||..|+.=. +....-...+..+|..| ..|..|++.-.+..+++
T Consensus 59 ~~~~C~~C~~~I~~~~~~~a--~~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~kC~~C~~~I~~~~~v~ 136 (182)
T 2jtn_A 59 EIPMCAGCDQHILDRFILKA--LDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVR 136 (182)
T ss_dssp SCCBCBTSSSBCCCSEEEEE--TTEEECSSTTSCTTTCCCCSSCCEEETTEEECHHHHHHTTSCCCTTTCCCCCSSCCCC
T ss_pred CCCcCccCCCCccCceeEEe--cCCeEccccCccCCCCCccCCCceeECCEeeecCccccccccccccCCCccCCCceEE
Confidence 45789999987654333332 3778888765321 21111123456778766 27999998654333221
Q ss_pred cCCccccccccccc-------CC------CCCCCCcccccccc
Q psy17723 105 CDLCDRGYHNYCIG-------LD------KIPTVGLVFTLKKK 134 (145)
Q Consensus 105 Cd~C~~~yH~~Cl~-------l~------~~p~~~W~C~~C~~ 134 (145)
..=++.||..|.. |. .+.++..+|..|-.
T Consensus 137 -~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~yC~~cy~ 178 (182)
T 2jtn_A 137 -RAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYE 178 (182)
T ss_dssp -EETTEECCTTTCCCTTTCCCCCTTCEEEECTTSCEECHHHHH
T ss_pred -ecCCCCEEeCCCcCCCCCCCCCCCCceEEccCCEEECHHHHH
Confidence 2346788988863 32 12356788887764
No 142
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.13 E-value=0.055 Score=33.00 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=27.2
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..+..|.+|...-. +.+.-..|++.||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~ 47 (72)
T 2djb_A 11 ELTPYILCSICKGYLI--DATTITECLHTFCKSCIVRHF 47 (72)
T ss_dssp CCCGGGSCTTTSSCCS--SCEECSSSCCEECHHHHHHHH
T ss_pred hcCCCCCCCCCChHHH--CcCEECCCCCHHHHHHHHHHH
Confidence 4456789999987663 344445799999999997654
No 143
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=89.97 E-value=0.23 Score=32.11 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=27.0
Q ss_pred CceecCCcc-cccccccccCCCCCCCCcccccccc
Q psy17723 101 KMLFCDLCD-RGYHNYCIGLDKIPTVGLVFTLKKK 134 (145)
Q Consensus 101 ~ll~Cd~C~-~~yH~~Cl~l~~~p~~~W~C~~C~~ 134 (145)
.||+|..|+ .+-|..|..+.. ....|.|..|+.
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSSLRP-NSKKWECNECLP 78 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCCT-TCSCCCCTTTSC
T ss_pred EEEeCcccCCchhHHHHhCCcC-CCCCEECCcCcc
Confidence 678899998 589999998754 345699999984
No 144
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=89.77 E-value=0.13 Score=34.09 Aligned_cols=46 Identities=20% Similarity=0.353 Sum_probs=31.0
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
....+..|.+|...-.....+ .|++.|+..|+..++. .....||.|
T Consensus 11 ~~~~~~~C~iC~~~~~~p~~~---~CgH~fC~~Ci~~~~~------~~~~~CP~C 56 (115)
T 3l11_A 11 PSLSECQCGICMEILVEPVTL---PCNHTLCKPCFQSTVE------KASLCCPFC 56 (115)
T ss_dssp CCHHHHBCTTTCSBCSSCEEC---TTSCEECHHHHCCCCC------TTTSBCTTT
T ss_pred CCCCCCCCccCCcccCceeEc---CCCCHHhHHHHHHHHh------HCcCCCCCC
Confidence 345577899999776322222 7999999999987653 124556655
No 145
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=89.77 E-value=0.013 Score=35.27 Aligned_cols=36 Identities=19% Similarity=0.508 Sum_probs=24.5
Q ss_pred cccccccccccCCCCCcEecCCCC---CCccccCCCCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCV---RYLHPACLDLPGE 72 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~---~~~H~~Cl~~~~~ 72 (145)
..+.|.||...++.+.++-| .|. +.||..||..|+.
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC-~C~gs~~~~H~~Cl~~W~~ 43 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRAC-GCTGELENVHRSCLSTWLT 43 (60)
T ss_dssp SCCEETTTTEECSCCCCCSC-CCSSGGGSCCHHHHHHHHH
T ss_pred CCCEeEEeecCCCCceecCc-CCCCchhhhHHHHHHHHHH
Confidence 46789999887543333333 344 4999999998753
No 146
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=89.51 E-value=0.091 Score=33.68 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=27.7
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~ 135 (145)
.|.||......+..+.--.|+..||..|+. +.. .-.||.|+..
T Consensus 42 ~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 42 CCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp EETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 456776543333333334599999999997 432 2489999865
No 147
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=89.13 E-value=0.095 Score=32.17 Aligned_cols=37 Identities=16% Similarity=0.396 Sum_probs=26.7
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..+..|.+|...-. +-+.-..|++.||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~ 47 (74)
T 2yur_A 11 PIPDELLCLICKDIMT--DAVVIPCCGNSYCDECIRTAL 47 (74)
T ss_dssp CSCGGGSCSSSCCCCT--TCEECSSSCCEECTTHHHHHH
T ss_pred cCCCCCCCcCCChHHh--CCeEcCCCCCHHHHHHHHHHH
Confidence 4556789999987663 333433489999999997754
No 148
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=88.91 E-value=0.076 Score=32.88 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=25.3
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..+..|.+|...-... +. ..|++.||..|+..++
T Consensus 15 ~~~~~~~C~IC~~~~~~p--~~-~~CgH~fC~~Ci~~~~ 50 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEP--VS-ADCNHSFCRACITLNY 50 (85)
T ss_dssp CCCTTTSCTTTCSCCSSC--EE-CTTSCCBCHHHHHHHH
T ss_pred hCccCCCCcCCChhhCcc--ee-CCCCCHHHHHHHHHHH
Confidence 345577899998876322 22 3589999999987643
No 149
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.86 E-value=0.094 Score=31.94 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=27.8
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.||.........+.--.|...||..|+. +.. ...||.|+..-
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~~ 62 (74)
T 2ep4_A 17 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV----RKVCPLCNMPV 62 (74)
T ss_dssp BCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH----CSBCTTTCCBC
T ss_pred CCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc----CCcCCCcCccc
Confidence 566777654333333223599999999996 322 13799998753
No 150
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=88.55 E-value=0.092 Score=35.84 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=1.0
Q ss_pred cccccccccccCCC---------------CCcEecCCCCCCccccCCCCCCC
Q psy17723 36 ESDKCKACDRDTSA---------------GEMIQCGKCVRYLHPACLDLPGE 72 (145)
Q Consensus 36 ~~~~C~~C~~~~~~---------------~~ll~C~~C~~~~H~~Cl~~~~~ 72 (145)
.++.|.||...-.. +..+.-..|+..||..|+..++.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~ 98 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 98 (117)
T ss_dssp CC--------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHH
Confidence 46899999876521 11222246999999999999864
No 151
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.14 E-value=0.16 Score=30.66 Aligned_cols=46 Identities=15% Similarity=0.272 Sum_probs=29.1
Q ss_pred cCccccccccCCCceecCCccccccccccc-CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG-LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~-l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||..... +.+++ .|+..||..|+. .-....+...||.|+..-.
T Consensus 22 ~C~IC~~~~~-~~~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 22 ICPICLDILQ-KPVTI--DCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp BCTTTCSBCS-SEEEC--TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred EeccCCcccC-CeEEc--CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 4556665432 22333 899999999987 2222245678999987654
No 152
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=87.96 E-value=0.054 Score=35.93 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=25.6
Q ss_pred cccccccccccCCC---------------CCcEecCCCCCCccccCCCCCC
Q psy17723 36 ESDKCKACDRDTSA---------------GEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 36 ~~~~C~~C~~~~~~---------------~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.++.|.||...-.. ...+.-..|+..||..||..++
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl 74 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMY 74 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHH
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHH
Confidence 35689999876422 1233356789999999998765
No 153
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=87.80 E-value=0.068 Score=35.74 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=26.3
Q ss_pred cccccccccccCCC---------------CCcEecCCCCCCccccCCCCCCC
Q psy17723 36 ESDKCKACDRDTSA---------------GEMIQCGKCVRYLHPACLDLPGE 72 (145)
Q Consensus 36 ~~~~C~~C~~~~~~---------------~~ll~C~~C~~~~H~~Cl~~~~~ 72 (145)
.++.|.||...-.. +..+.-..|+..||..|+..++.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 87 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 87 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH
Confidence 46789999876432 12244457999999999988753
No 154
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=87.64 E-value=0.043 Score=32.98 Aligned_cols=46 Identities=13% Similarity=0.274 Sum_probs=28.9
Q ss_pred cCccccccccCCCceecCCcc---ccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCD---RGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~---~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||...+++ .++.=..|. ++||..||. +.. .+.+.|+.|.....
T Consensus 8 ~CrIC~~~~~~-~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 8 VCWICNEELGN-ERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVYN 58 (60)
T ss_dssp EETTTTEECSC-CCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBCC
T ss_pred EeEEeecCCCC-ceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCeee
Confidence 56677654433 343322454 599999997 432 23589999987654
No 155
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.15 E-value=0.11 Score=31.29 Aligned_cols=34 Identities=15% Similarity=0.398 Sum_probs=25.4
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
...+..|.+|...... .-..|+..||..|+..++
T Consensus 12 ~~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~ 45 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD----LILPCAHSFCQKCIDKWS 45 (70)
T ss_dssp CCCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSS
T ss_pred CCCCCCCeeCCcCccC----cccCCCCcccHHHHHHHH
Confidence 3456789999987643 234689999999998764
No 156
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.83 E-value=0.18 Score=31.45 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=26.9
Q ss_pred CCccccccccccccCCCCCc-EecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEM-IQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~l-l~C~~C~~~~H~~Cl~~~~ 71 (145)
.......|.+|...-..... ..=..|+..||..|+..++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~ 50 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLL 50 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHH
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHH
Confidence 34557789999987644221 2223699999999997754
No 157
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=85.76 E-value=0.2 Score=33.11 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=24.2
Q ss_pred cCCccccccccccc--CCCC-CCCCccccccccchhh
Q psy17723 105 CDLCDRGYHNYCIG--LDKI-PTVGLVFTLKKKKNKK 138 (145)
Q Consensus 105 Cd~C~~~yH~~Cl~--l~~~-p~~~W~C~~C~~~~~~ 138 (145)
--.|...||..|+. +... ....-.||.|+.....
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 56799999999997 4221 2346789999976543
No 158
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=85.36 E-value=0.11 Score=42.49 Aligned_cols=50 Identities=22% Similarity=0.542 Sum_probs=37.1
Q ss_pred ccccccccccccCCCCCcEecC--CCCCCccccCCCCCCCC--CCc-CCCCccccccc
Q psy17723 35 PESDKCKACDRDTSAGEMIQCG--KCVRYLHPACLDLPGEM--LPH-MKLYDWQCSDC 87 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~~~~~~--~~~-~~~~~W~C~~C 87 (145)
..+..|.+|++++ +|+.|+ .|.+.|-..|+...... ... .....|.|--|
T Consensus 91 G~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C 145 (386)
T 2pv0_B 91 GYQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLC 145 (386)
T ss_dssp SSBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTT
T ss_pred CCcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEc
Confidence 4577899999988 999999 89999999998764421 111 23478966655
No 159
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=84.13 E-value=0.36 Score=31.11 Aligned_cols=29 Identities=21% Similarity=0.628 Sum_probs=22.4
Q ss_pred cCccccccccCCCceecCC--ccccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDL--CDRGYHNYCIG 118 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~--C~~~yH~~Cl~ 118 (145)
.|.+|++.+ .+--|.|.. |..+||+.|..
T Consensus 19 ~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 19 TCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred CCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 677887642 357788975 99999999983
No 160
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.93 E-value=0.41 Score=28.32 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=27.7
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-....+ -.|+..||..|+. +. .+...||.|+..-.
T Consensus 17 ~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 17 KCEKCHLVLCSPKQ---TECGHRFCESCMAALLS---SSSPKCTACQESIV 61 (66)
T ss_dssp ECTTTCCEESSCCC---CSSSCCCCHHHHHHHHT---TSSCCCTTTCCCCC
T ss_pred CCCCCChHhcCeeE---CCCCCHHHHHHHHHHHH---hCcCCCCCCCcCCC
Confidence 44466654322222 3799899999986 43 34568999987644
No 161
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=83.18 E-value=0.12 Score=30.81 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=24.8
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..|.+|..... +...-..|+..||..|+..+.
T Consensus 4 ~~~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~ 37 (68)
T 1chc_A 4 VAERCPICLEDPS--NYSMALPCLHAFCYVCITRWI 37 (68)
T ss_dssp CCCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHH
T ss_pred CCCCCeeCCcccc--CCcEecCCCCeeHHHHHHHHH
Confidence 4668999988763 223445699999999997653
No 162
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.13 E-value=0.22 Score=30.83 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=24.6
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.....|.+|...-.. .+. ..|++.||..|+..++
T Consensus 13 ~~~~~C~IC~~~~~~--p~~-~~CgH~fC~~Ci~~~~ 46 (81)
T 2csy_A 13 EIPFRCFICRQAFQN--PVV-TKCRHYFCESCALEHF 46 (81)
T ss_dssp CCCSBCSSSCSBCCS--EEE-CTTSCEEEHHHHHHHH
T ss_pred CCCCCCcCCCchhcC--eeE-ccCCCHhHHHHHHHHH
Confidence 346689999887632 222 5799999999997654
No 163
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.00 E-value=0.65 Score=26.42 Aligned_cols=40 Identities=15% Similarity=0.446 Sum_probs=24.7
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCcccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLK 132 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C 132 (145)
.|.||...-....++ .|+..||..|+. +... .....||.|
T Consensus 17 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 17 SCSVCLEYLKEPVII---ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp BCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred CCccCCcccCccEeC---CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 455776644333333 688889999986 3322 345778876
No 164
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=81.69 E-value=0.45 Score=31.64 Aligned_cols=30 Identities=23% Similarity=0.525 Sum_probs=22.9
Q ss_pred eecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 103 LFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 103 l~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
+.--.|...||..|+. |.. .-.||.|+..-
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~~ 99 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNREW 99 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHTT----CSBCSSSCSBC
T ss_pred EeecccCcEECHHHHHHHHHc----CCcCcCCCCcc
Confidence 4445799999999997 543 35799999873
No 165
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=81.13 E-value=0.5 Score=30.39 Aligned_cols=30 Identities=30% Similarity=0.665 Sum_probs=24.6
Q ss_pred cccccccccc--CCCCCcEecCC--CCCCccccCCCC
Q psy17723 37 SDKCKACDRD--TSAGEMIQCGK--CVRYLHPACLDL 69 (145)
Q Consensus 37 ~~~C~~C~~~--~~~~~ll~C~~--C~~~~H~~Cl~~ 69 (145)
...|.+|+.. | ..|.|.. |..+||+.|+..
T Consensus 17 ~l~C~iC~~~~~G---AciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 17 KLTCYLCKQKGVG---ASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCBTTTTBCCSS---CEEECSCTTTCCEEEHHHHHH
T ss_pred cCCCcCCCCCCCc---EeEecCCCCCCCcCcHHHHHH
Confidence 4589999864 6 8899965 999999999754
No 166
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=81.00 E-value=0.66 Score=35.24 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=31.5
Q ss_pred cCccccccccCCCceecCCcccccccccccCCCCCCCCccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~~p~~~W~C~~C~~~ 135 (145)
.|.+|...-. .-..|..|...||..|+..-....+.-.||.|...
T Consensus 182 ~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 182 ICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 226 (238)
T ss_dssp BCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCB
T ss_pred cCcchhhHHh--CCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 7888887543 33789999999999999721112345678888653
No 167
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.83 E-value=1.4 Score=26.90 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=25.1
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLP 70 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~ 70 (145)
.+..+..|.+|...-....++ .|++.||..|+..+
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~ 49 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSL---DCGHSFCQACLTAN 49 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHH
T ss_pred HccCCCCCCCCCcccCCceeC---CCCCHHHHHHHHHH
Confidence 344577899999876432222 68999999998764
No 168
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=80.73 E-value=0.52 Score=30.72 Aligned_cols=44 Identities=18% Similarity=0.312 Sum_probs=27.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.+|...-....++ .|+..||..|+. +. ...+...||.|+..-
T Consensus 23 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~-~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 23 ECPICLELIKEPVST---KCDHIFCKFCMLKLLN-QKKGPSQCPLCKNDI 68 (112)
T ss_dssp SCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHH-SSSSSCCCTTTSCCC
T ss_pred CCcccChhhcCeEEC---CCCCHHHHHHHHHHHH-hCCCCCCCcCCCCcC
Confidence 455676543222222 688889999986 32 223457899998753
No 169
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=80.48 E-value=1.7 Score=30.66 Aligned_cols=97 Identities=21% Similarity=0.296 Sum_probs=57.7
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCC-----CCCCCCcCCCCcccccccc------cCccccccccCCCceec
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL-----PGEMLPHMKLYDWQCSDCK------SCVACEKAQDDDKMLFC 105 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~-----~~~~~~~~~~~~W~C~~C~------~C~vC~~~~~~~~ll~C 105 (145)
...|..|+..-....+|.- -++.||..|+.= ++....-..++..+|..|- .|..|++.-.+..+++
T Consensus 6 ~~~C~~C~~~I~~~~~~~a--~~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~~C~~C~~~I~~~~~v~- 82 (169)
T 2rgt_A 6 IPMCAGCDQHILDRFILKA--LDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVR- 82 (169)
T ss_dssp -CBBSSSSSBCCSSSCEEC--SSCEECTTTSBCTTTCCBCCSCCEESSSCEECHHHHHHHHSCBCTTTCCBCCTTSEEE-
T ss_pred CCccccCCCccCCcEEEEE--CCcEEccccCccCCCCCcCCCCCcccCCeeeecccccccccccccccccccCCCcEEE-
Confidence 4689999887654444432 377888776432 1111111245677887773 7999998654443332
Q ss_pred CCccccccccccc-------CC------CCCCCCccccccccch
Q psy17723 106 DLCDRGYHNYCIG-------LD------KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 106 d~C~~~yH~~Cl~-------l~------~~p~~~W~C~~C~~~~ 136 (145)
..=++.||..|.. |. .+.++..+|..|..+.
T Consensus 83 ~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~~C~~c~~~~ 126 (169)
T 2rgt_A 83 RAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETA 126 (169)
T ss_dssp EETTEEEEGGGCBCTTTCCBCCTTCEEEECTTSCEEEHHHHHHH
T ss_pred EcCCceEeeCCCcCCCCCCCCCCCCceEEccCCeEECHHHHHHH
Confidence 2346788988863 32 1235678998887544
No 170
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=79.45 E-value=1.1 Score=27.10 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=28.0
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCC---CCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKI---PTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~---p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-....++ .|+..||..|+. +... ..+...||.|+..-.
T Consensus 14 ~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 14 TCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp EETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 344666543332222 688888888886 2221 134679999997643
No 171
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.58 E-value=0.59 Score=28.63 Aligned_cols=46 Identities=11% Similarity=0.295 Sum_probs=27.9
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCC--CCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDK--IPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~--~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...... .+++ .|+..||..|+. +.. ...+...||.|+..-.
T Consensus 21 ~C~IC~~~~~~-p~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 21 TCPICLELLTQ-PLSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCTTTCSCCSS-CBCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCcccCC-ceeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 44566654322 2222 688889888986 221 1334678999987643
No 172
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=78.56 E-value=2.5 Score=24.17 Aligned_cols=31 Identities=19% Similarity=0.681 Sum_probs=21.9
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
.+..|.+|...-....++ .|+..|+..|+..
T Consensus 5 ~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~ 35 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA 35 (56)
T ss_dssp CCSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS
T ss_pred cCCCceEeCCccCCeEEc---CCCCcccHHHHcc
Confidence 356799998866433333 4788999999865
No 173
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.68 E-value=5.2 Score=25.17 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=27.4
Q ss_pred cccccccccccCC--CCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTS--AGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...+|.+|+..-- ...-+.|..|...+|..|+..
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 4568999987542 257789999999999999875
No 174
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.62 E-value=0.69 Score=28.67 Aligned_cols=48 Identities=15% Similarity=0.296 Sum_probs=28.5
Q ss_pred cCccccccccCCC-ceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDK-MLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~-ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|........ ...--.|+..||..|+. +.. ..+...||.|+..-.
T Consensus 17 ~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 17 ECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLAS-SINGVRCPFCSKITR 67 (88)
T ss_dssp BCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHH-CSSCBCCTTTCCCBC
T ss_pred CCccCCccccccCCCeEECCCCChhhHHHHHHHHHc-CCCCcCCCCCCCccc
Confidence 4456665432211 12222699999999986 322 124578999997643
No 175
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=74.91 E-value=0.4 Score=28.59 Aligned_cols=45 Identities=18% Similarity=0.426 Sum_probs=29.7
Q ss_pred cCcccccccc----CCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQD----DDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~----~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-. .+..+.--.|+..||..|+. +... -.||.|+..-.
T Consensus 12 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~~ 62 (71)
T 3ng2_A 12 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKIN 62 (71)
T ss_dssp BCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCBCC
T ss_pred CCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCccC
Confidence 4556665321 23555667899999999996 3221 38999987644
No 176
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=74.62 E-value=0.62 Score=31.64 Aligned_cols=30 Identities=23% Similarity=0.525 Sum_probs=0.0
Q ss_pred eecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 103 LFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 103 l~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
++-..|...||..|+. |.. .-.||.|+..-
T Consensus 79 v~~~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~~ 110 (117)
T 4a0k_B 79 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNREW 110 (117)
T ss_dssp ------------------------------------
T ss_pred cccCCcCceEcHHHHHHHHHc----CCcCCCCCCee
Confidence 3345799999999987 433 34799998773
No 177
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=74.41 E-value=0.36 Score=33.17 Aligned_cols=32 Identities=13% Similarity=0.263 Sum_probs=23.2
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
+..|.+|...-.. .+. ..|++.||..|+..++
T Consensus 53 ~~~C~iC~~~~~~--~~~-~~CgH~fc~~Ci~~~~ 84 (138)
T 4ayc_A 53 ELQCIICSEYFIE--AVT-LNCAHSFCSYCINEWM 84 (138)
T ss_dssp HSBCTTTCSBCSS--EEE-ETTSCEEEHHHHHHHT
T ss_pred cCCCcccCcccCC--ceE-CCCCCCccHHHHHHHH
Confidence 4579999987632 222 3689999999997654
No 178
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=72.49 E-value=1 Score=29.02 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=29.9
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.+|...- ...+.+-.|+..||..|+. +... ...||.|+..-
T Consensus 24 ~C~IC~~~~--~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~~ 68 (100)
T 3lrq_A 24 RCFICMEKL--RDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAPL 68 (100)
T ss_dssp BCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCBC
T ss_pred CCccCCccc--cCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCcC
Confidence 566777643 3456678999999999986 3222 26899998764
No 179
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=72.42 E-value=0.42 Score=27.74 Aligned_cols=45 Identities=18% Similarity=0.436 Sum_probs=29.5
Q ss_pred cCcccccccc----CCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQD----DDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~----~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-. .+..+.--.|+..||..|+. +.. ...||.|+..-.
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 5 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKIN 55 (64)
T ss_dssp BCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCBCT
T ss_pred CCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCccCC
Confidence 4557765321 23444566899999999986 332 348999987644
No 180
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=72.08 E-value=2.3 Score=36.54 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=26.1
Q ss_pred cccccccccccC--CCCCcEecCCCCCCccccCCCCCCCCCC----------cCCCCcccc---cccccCcccccc--cc
Q psy17723 36 ESDKCKACDRDT--SAGEMIQCGKCVRYLHPACLDLPGEMLP----------HMKLYDWQC---SDCKSCVACEKA--QD 98 (145)
Q Consensus 36 ~~~~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~~~~~~~~----------~~~~~~W~C---~~C~~C~vC~~~--~~ 98 (145)
....|.+|+..- -...-+.|..|+...|..|.......-+ ......|.= +.-.+|.+|++. +-
T Consensus 47 ~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g~ 126 (674)
T 3pfq_A 47 QPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGL 126 (674)
T ss_dssp -------------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBBS
T ss_pred CCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccchh
Confidence 356899998752 2356688999999999999765321100 001123321 122478888764 22
Q ss_pred CCCceecCCccccccccccc
Q psy17723 99 DDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 99 ~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
...-+.|..|..-+|..|..
T Consensus 127 ~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 127 IHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp SSCEECCSSSCCCBCSSTTS
T ss_pred hcCccccccCCcchhhhhhh
Confidence 33568899999999999975
No 181
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=71.98 E-value=3.3 Score=23.42 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=11.9
Q ss_pred CCCCCCCCccccccccch
Q psy17723 119 LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 119 l~~~p~~~W~C~~C~~~~ 136 (145)
...+|+. |.||.|...+
T Consensus 24 f~~lP~d-w~CP~Cg~~k 40 (46)
T 6rxn_A 24 FDQLPDD-WCCPVCGVSK 40 (46)
T ss_dssp GGGSCTT-CBCTTTCCBG
T ss_pred hhhCCCC-CcCcCCCCcH
Confidence 3455654 9999998753
No 182
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=71.44 E-value=5.5 Score=24.51 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=15.9
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPAC 66 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~C 66 (145)
.....|..|+..-...++|. .=++.||..|
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~--a~~~~wH~~C 42 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLC--VNGHFFHRSC 42 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCC--BTTBCCBTTT
T ss_pred CCCCCCcccCCCcccceEEE--ECCCeeCCCc
Confidence 34567888887653333332 2245566444
No 183
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=71.36 E-value=2 Score=28.19 Aligned_cols=45 Identities=11% Similarity=0.341 Sum_probs=27.4
Q ss_pred cCccccccccCCCceecCCcccccccccccCCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGLDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-. ..+++ .|+..|+..|+.- ....+...||.|+..-.
T Consensus 17 ~C~iC~~~~~-~p~~~--~CgH~fC~~Ci~~-~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 17 QCGICMEILV-EPVTL--PCNHTLCKPCFQS-TVEKASLCCPFCRRRVS 61 (115)
T ss_dssp BCTTTCSBCS-SCEEC--TTSCEECHHHHCC-CCCTTTSBCTTTCCBCH
T ss_pred CCccCCcccC-ceeEc--CCCCHHhHHHHHH-HHhHCcCCCCCCCcccC
Confidence 4456665432 23333 7888888888761 11234588999997643
No 184
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=70.22 E-value=0.53 Score=30.78 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=26.5
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.+|...-. +-+.-..|++.||..|+..++
T Consensus 13 ~~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~ 47 (108)
T 2ckl_A 13 NPHLMCVLCGGYFI--DATTIIECLHSFCKTCIVRYL 47 (108)
T ss_dssp GGGTBCTTTSSBCS--SEEEETTTCCEEEHHHHHHHH
T ss_pred CCcCCCccCChHHh--CcCEeCCCCChhhHHHHHHHH
Confidence 45778999988763 344546899999999997654
No 185
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=69.66 E-value=1.4 Score=26.47 Aligned_cols=48 Identities=25% Similarity=0.499 Sum_probs=28.9
Q ss_pred cCccccccc-cCCCceecCCccccccccccc-CC-CCCCCCccccccccch
Q psy17723 89 SCVACEKAQ-DDDKMLFCDLCDRGYHNYCIG-LD-KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~-~~~~ll~Cd~C~~~yH~~Cl~-l~-~~p~~~W~C~~C~~~~ 136 (145)
+|.+|.++- -++.--.|..|..-|=..|-+ .+ ...+..|+|..|++.|
T Consensus 11 ~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k~q 61 (62)
T 2a20_A 11 TCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQ 61 (62)
T ss_dssp CCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHHHT
T ss_pred hhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhhcc
Confidence 566777642 123334566666666666654 22 2334589999998765
No 186
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=69.32 E-value=2.3 Score=28.08 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=24.5
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.+|...-... +.-..|++.|+..|+..++
T Consensus 20 ~~~~~C~IC~~~~~~p--v~~~~CgH~fC~~Ci~~~~ 54 (117)
T 1jm7_B 20 EKLLRCSRCTNILREP--VCLGGCEHIFCSNCVSDCI 54 (117)
T ss_dssp HHTTSCSSSCSCCSSC--BCCCSSSCCBCTTTGGGGT
T ss_pred hhCCCCCCCChHhhCc--cEeCCCCCHHHHHHHHHHh
Confidence 3467899998876332 2222689999999997653
No 187
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=69.20 E-value=3.2 Score=23.34 Aligned_cols=32 Identities=19% Similarity=0.415 Sum_probs=26.6
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCC
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLP 70 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~ 70 (145)
...|.+|++.-- .-+.|..|+...|..|+...
T Consensus 14 pt~C~~C~~~l~--qG~~C~~C~~~~H~~C~~~v 45 (52)
T 1faq_A 14 LAFCDICQKFLL--NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CEECTTSSSEEC--SEEECTTTTCCBCSTTSSSS
T ss_pred CcCCCCcccccc--cCCEeCCCCCeEChhHHhhC
Confidence 468999987653 67899999999999998753
No 188
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.68 E-value=3.2 Score=26.63 Aligned_cols=33 Identities=27% Similarity=0.716 Sum_probs=25.2
Q ss_pred CCcEecCCCC-CCccccCCCCCCCCCCcCCCCcccccccc
Q psy17723 50 GEMIQCGKCV-RYLHPACLDLPGEMLPHMKLYDWQCSDCK 88 (145)
Q Consensus 50 ~~ll~C~~C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 88 (145)
-+||.|..|+ ...|..|..... ....|.|..|.
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~~------~~~~weC~~C~ 77 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLRP------NSKKWECNECL 77 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCCT------TCSCCCCTTTS
T ss_pred EEEEeCcccCCchhHHHHhCCcC------CCCCEECCcCc
Confidence 5799999995 789999998632 13489888773
No 189
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=68.55 E-value=1.2 Score=33.85 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=27.5
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
...|.+|.+.-. .-+.|..|+..||..|+..+.
T Consensus 180 i~~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~ 212 (238)
T 3nw0_A 180 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYF 212 (238)
T ss_dssp CCBCTTTCSBCS--SCEECSSSCCEECHHHHHHHT
T ss_pred CCcCcchhhHHh--CCcccCccChHHHHHHHHHHH
Confidence 568999998874 458899999999999997654
No 190
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=68.38 E-value=2.3 Score=27.04 Aligned_cols=25 Identities=20% Similarity=0.683 Sum_probs=12.6
Q ss_pred cccccccccCCC-CCcEecCCCCCCc
Q psy17723 38 DKCKACDRDTSA-GEMIQCGKCVRYL 62 (145)
Q Consensus 38 ~~C~~C~~~~~~-~~ll~C~~C~~~~ 62 (145)
..|..|...-.. .....|..|+..|
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~ 28 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDF 28 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEE
T ss_pred CCCCCCCCccccCCCceECccccccC
Confidence 356666654322 2344466666543
No 191
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=68.11 E-value=0.5 Score=28.82 Aligned_cols=35 Identities=9% Similarity=-0.050 Sum_probs=25.3
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
++.+..|.+|...-... +. ..|+..|+..|+..++
T Consensus 5 ~~~~~~C~IC~~~~~~P--v~-~~CgH~fc~~Ci~~~~ 39 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDP--VI-VSTGQTYERSSIQKWL 39 (78)
T ss_dssp CSSSSSCTTTSCCCSSE--EE-ETTTEEEEHHHHHHHH
T ss_pred CcccCCCCCccccccCC--EE-cCCCCeecHHHHHHHH
Confidence 45577999999876322 22 2699999999997654
No 192
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=67.26 E-value=1.3 Score=28.82 Aligned_cols=46 Identities=15% Similarity=0.506 Sum_probs=31.2
Q ss_pred cccccccccccC----CCCCcEecCCCCCCccccCCCCCCCCCCcCCCCccccccc
Q psy17723 36 ESDKCKACDRDT----SAGEMIQCGKCVRYLHPACLDLPGEMLPHMKLYDWQCSDC 87 (145)
Q Consensus 36 ~~~~C~~C~~~~----~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 87 (145)
+..+|.+|++.- +.+.++.|..|.-..-..|+.. +.+++.-.||.|
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY------ErkeG~q~CpqC 64 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY------ERREGTQNCPQC 64 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH------HHHTSCSSCTTT
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH------HHhccCcccccc
Confidence 568999999863 3378889998887776666654 222445556655
No 193
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=67.22 E-value=1.4 Score=35.67 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=29.4
Q ss_pred cCccccccccC-C--CceecC--Cccccccccccc--CCCCCCC-------Cccccccccc
Q psy17723 89 SCVACEKAQDD-D--KMLFCD--LCDRGYHNYCIG--LDKIPTV-------GLVFTLKKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~-~--~ll~Cd--~C~~~yH~~Cl~--l~~~p~~-------~W~C~~C~~~ 135 (145)
.|.+|-..-.+ + ....|+ .|...||..||. +...+.+ .-.||.|+..
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 45566643222 2 336798 899999999996 3332221 2469999864
No 194
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=67.05 E-value=1.3 Score=29.55 Aligned_cols=43 Identities=9% Similarity=0.285 Sum_probs=27.1
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-.. .+++ .|+..||..|+. +. .+...||.|+..-.
T Consensus 54 ~C~IC~~~~~~-p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 54 QCICCQELVFR-PITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDLG 98 (124)
T ss_dssp BCTTTSSBCSS-EEEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBCC
T ss_pred CCCcCChHHcC-cEEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccCC
Confidence 45566654322 2222 788889999986 33 34468999987653
No 195
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=66.73 E-value=1.3 Score=23.01 Aligned_cols=17 Identities=12% Similarity=-0.058 Sum_probs=12.9
Q ss_pred CCCccccccccchhhhh
Q psy17723 124 TVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 124 ~~~W~C~~C~~~~~~~~ 140 (145)
.|+|.|+.|..-+-.+|
T Consensus 3 ~gDW~C~~C~~~Nfa~r 19 (32)
T 2lk0_A 3 FEDWLCNKCCLNNFRKR 19 (32)
T ss_dssp CSEEECTTTCCEEETTC
T ss_pred CCCCCcCcCcCCcChhc
Confidence 48899999987665554
No 196
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=66.65 E-value=2.6 Score=21.97 Aligned_cols=18 Identities=6% Similarity=-0.064 Sum_probs=13.2
Q ss_pred CCCCccccccccchhhhh
Q psy17723 123 PTVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 123 p~~~W~C~~C~~~~~~~~ 140 (145)
..|+|.|+.|..-+-.+|
T Consensus 3 ~~gDW~C~~C~~~Nfa~R 20 (33)
T 2k1p_A 3 SANDWQCKTCSNVNWARR 20 (33)
T ss_dssp SSSSCBCSSSCCBCCTTC
T ss_pred CCCCcccCCCCCcccccc
Confidence 368899999987655544
No 197
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=66.26 E-value=0.61 Score=29.91 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=25.6
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
..+..|.+|...-. +-+.-..|++.||..|+..+.
T Consensus 20 ~~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~ 54 (99)
T 2y43_A 20 DDLLRCGICFEYFN--IAMIIPQCSHNYCSLCIRKFL 54 (99)
T ss_dssp HHHTBCTTTCSBCS--SEEECTTTCCEEEHHHHHHHH
T ss_pred CCCCCcccCChhhC--CcCEECCCCCHhhHHHHHHHH
Confidence 34678999998763 333335799999999997654
No 198
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=66.12 E-value=7.1 Score=24.34 Aligned_cols=31 Identities=19% Similarity=0.536 Sum_probs=19.7
Q ss_pred ccccccccccccCCCCCcEecCCCCCCccccCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRYLHPACL 67 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl 67 (145)
.....|..|+..-...++|. .=++.||..|.
T Consensus 13 ~~~~~C~~C~~~I~~~~~v~--a~~~~~H~~CF 43 (91)
T 2d8y_A 13 PARETCVECQKTVYPMERLL--ANQQVFHISCF 43 (91)
T ss_dssp SSSCBCTTTCCBCCTTSEEE--CSSSEEETTTC
T ss_pred CCCCcCccCCCccCCceeEE--ECCCEECCCCC
Confidence 34668999988775444443 34667776554
No 199
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=65.98 E-value=3.2 Score=25.72 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=20.7
Q ss_pred Cccccccccccc-CCCCCCCCccccccccchhh
Q psy17723 107 LCDRGYHNYCIG-LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 107 ~C~~~yH~~Cl~-l~~~p~~~W~C~~C~~~~~~ 138 (145)
.|+..|+..|+. +.. .+...||.|+.....
T Consensus 32 ~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 32 TCGYQICRFCWHRIRT--DENGLCPACRKPYPE 62 (78)
T ss_dssp TTSCCCCHHHHHHHTT--SSCSBCTTTCCBCSS
T ss_pred CCCCCcCHHHHHHHHh--cCCCCCCCCCCccCC
Confidence 588778888875 211 246899999987543
No 200
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=63.23 E-value=2.6 Score=29.49 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=28.6
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.||...- ...+....|+..||..|+. +. .+...||.|+..-
T Consensus 56 ~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 56 MCPICLDML--KNTMTTKECLHRFCADCIITALR---SGNKECPTCRKKL 100 (165)
T ss_dssp BCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCcccChHh--hCcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCcC
Confidence 455666543 2334456899999999986 33 2357899998764
No 201
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=61.55 E-value=6.4 Score=21.97 Aligned_cols=20 Identities=35% Similarity=0.951 Sum_probs=13.3
Q ss_pred CCCCccccc--ccc--------cCcccccc
Q psy17723 77 MKLYDWQCS--DCK--------SCVACEKA 96 (145)
Q Consensus 77 ~~~~~W~C~--~C~--------~C~vC~~~ 96 (145)
...++|.|+ .|. .|..|+.+
T Consensus 10 ~~~GDW~C~~~~C~~~Nfa~R~~C~~C~~p 39 (45)
T 1n0z_A 10 VSDGDWICPDKKCGNVNFARRTSCDRCGRE 39 (45)
T ss_dssp SCSSSCBCSSTTTCCBCCSSCSBCSSSCCB
T ss_pred CCCCCcCCCCCCCCCEEccccccccccCCc
Confidence 356899999 563 56666553
No 202
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=61.38 E-value=4.2 Score=29.21 Aligned_cols=27 Identities=19% Similarity=0.509 Sum_probs=16.6
Q ss_pred CccccccccCCCceecCCccccccccccc
Q psy17723 90 CVACEKAQDDDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 90 C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
|..|++.-.+..+|. .=++.||..|..
T Consensus 118 C~~C~~~I~~~~~v~--a~~~~~H~~CF~ 144 (192)
T 1b8t_A 118 CPRCGQAVYAAEKVI--GAGKSWHKSCFR 144 (192)
T ss_dssp CTTTSCEECSSSCEE--ETTEEECTTTCB
T ss_pred CCCCCCEecCcEEEe--cCCCccchhcCC
Confidence 667776544344443 336788988874
No 203
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=59.02 E-value=4.6 Score=24.72 Aligned_cols=33 Identities=24% Similarity=0.660 Sum_probs=27.7
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...+|..|+..- ...-+.|..|+...|..|...
T Consensus 34 ~pt~C~~C~~~l-~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 34 GPGWCDLCGREV-LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCBCTTTSSBC-SSCCEECTTSSCEECTGGGGG
T ss_pred CCcchhhhhHHH-HhCcCccCCCCCeechhhhcc
Confidence 456899998876 567789999999999999865
No 204
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=55.66 E-value=10 Score=22.33 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=26.9
Q ss_pred ccccccccccCC--CCCcEecCCCCCCccccCCCC
Q psy17723 37 SDKCKACDRDTS--AGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 37 ~~~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...|.+|+..-- ...-+.|..|....|..|+..
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 468999988642 257789999999999999875
No 205
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=55.56 E-value=3.5 Score=21.38 Aligned_cols=24 Identities=21% Similarity=0.225 Sum_probs=16.4
Q ss_pred cccccC----CCCCCCCccccccccchh
Q psy17723 114 NYCIGL----DKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 114 ~~Cl~l----~~~p~~~W~C~~C~~~~~ 137 (145)
.+|+.| +...+|+|-|..|..+-+
T Consensus 2 tycielgercpnpregdwcchkcvpegk 29 (36)
T 4b2u_A 2 TYCIELGERCPNPREGDWCCHKCVPEGK 29 (36)
T ss_dssp CSSCCTTSBCCCGGGCCSSSSEEEEETT
T ss_pred ceeeeccccCcCCCccCeeeecccccCc
Confidence 356543 334468999999998754
No 206
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=54.40 E-value=8.3 Score=31.22 Aligned_cols=36 Identities=28% Similarity=0.490 Sum_probs=27.3
Q ss_pred cccccccccccCCC---CCcEecC--CCCCCccccCCCCCC
Q psy17723 36 ESDKCKACDRDTSA---GEMIQCG--KCVRYLHPACLDLPG 71 (145)
Q Consensus 36 ~~~~C~~C~~~~~~---~~ll~C~--~C~~~~H~~Cl~~~~ 71 (145)
....|.||-+.... -.-..|. .|++.||..||..|+
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWL 347 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWF 347 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHH
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHH
Confidence 45679999886644 2234787 799999999998775
No 207
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=54.32 E-value=7.6 Score=23.23 Aligned_cols=17 Identities=24% Similarity=0.716 Sum_probs=10.4
Q ss_pred CCcccccccccCcccccc
Q psy17723 79 LYDWQCSDCKSCVACEKA 96 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~ 96 (145)
...|+ ++|-.|..|+..
T Consensus 24 ~~~wH-~~CF~C~~C~~~ 40 (73)
T 1wig_A 24 EKHYH-PSCALCVRCGQM 40 (73)
T ss_dssp SCCBC-TTTSCCSSSCCC
T ss_pred CCCCC-CCcCEeCCCCCC
Confidence 34565 666677777654
No 208
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=53.81 E-value=3.3 Score=24.09 Aligned_cols=46 Identities=11% Similarity=0.282 Sum_probs=28.6
Q ss_pred cCccccc-cccCCCc-eecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEK-AQDDDKM-LFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~-~~~~~~l-l~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|.. ....... ++=-.|+..||..|+. +. .+...||.|+..-.
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV---RGAGNCPECGTPLR 54 (65)
T ss_dssp CCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH---TTSSSCTTTCCCCS
T ss_pred cCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH---cCCCcCCCCCCccc
Confidence 4567776 2222221 2225799999999986 22 23568999987654
No 209
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=53.73 E-value=12 Score=21.76 Aligned_cols=15 Identities=27% Similarity=0.275 Sum_probs=10.9
Q ss_pred CCCCCCccccccccch
Q psy17723 121 KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~ 136 (145)
.+|+ +|.||.|...+
T Consensus 32 ~lP~-dw~CP~Cg~~K 46 (54)
T 4rxn_A 32 DIPD-DWVCPLCGVGK 46 (54)
T ss_dssp GSCT-TCBCTTTCCBG
T ss_pred HCCC-CCcCcCCCCcH
Confidence 4554 59999998753
No 210
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=53.59 E-value=1.2 Score=27.97 Aligned_cols=37 Identities=16% Similarity=0.369 Sum_probs=25.5
Q ss_pred CCccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
.+..+..|.+|...-.. -+.-..|++.|+..|+..++
T Consensus 9 ~~~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~ 45 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTD--AVVIPCCGNSYCDECIRTAL 45 (92)
T ss_dssp CCCTTTEETTTTEECSS--CEECTTTCCEECHHHHHHHH
T ss_pred cCCcCCCCCCCChhhcC--ceECCCCCCHHHHHHHHHHH
Confidence 34457789999987632 23334489999999987643
No 211
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=51.99 E-value=7.1 Score=26.93 Aligned_cols=18 Identities=11% Similarity=0.053 Sum_probs=12.9
Q ss_pred CCCCccccccccchhhhh
Q psy17723 123 PTVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 123 p~~~W~C~~C~~~~~~~~ 140 (145)
.+..|+|..|.+.+.-+.
T Consensus 95 ~~~~W~C~vC~k~rel~~ 112 (134)
T 1zbd_B 95 PHPVWLCKICLEQREVWK 112 (134)
T ss_dssp SSCCEEEHHHHHHHHHHH
T ss_pred CccceechhhHHHHHHHH
Confidence 455799999998765443
No 212
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.84 E-value=7.1 Score=22.52 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=20.5
Q ss_pred eecCCcccccccccccCCCCCCCCccccccccchhhhhhc
Q psy17723 103 LFCDLCDRGYHNYCIGLDKIPTVGLVFTLKKKKNKKKKKK 142 (145)
Q Consensus 103 l~Cd~C~~~yH~~Cl~l~~~p~~~W~C~~C~~~~~~~~~~ 142 (145)
.+|..|+.- +|.+.|.|..|-..+-..|++
T Consensus 15 ~iCpkC~a~----------~~~gaw~CrKCG~~~lr~k~k 44 (51)
T 3j21_g 15 YVCLRCGAT----------NPWGAKKCRKCGYKRLRPKAK 44 (51)
T ss_dssp EECTTTCCE----------ECTTCSSCSSSSSCCCEEECC
T ss_pred ccCCCCCCc----------CCCCceecCCCCCcccccccc
Confidence 456666542 678899999998775554443
No 213
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.66 E-value=19 Score=21.83 Aligned_cols=30 Identities=17% Similarity=0.550 Sum_probs=16.8
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACL 67 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl 67 (145)
....|..|+..-...++|.= =++.||+.|+
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a--~~~~wH~~CF 43 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLA--LDKQWHVSCF 43 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEE--TTEEECTTTC
T ss_pred CCCCCcCcCCeeCCCeEEEE--CCcccccccC
Confidence 45688888876543333332 2456665443
No 214
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.42 E-value=6.5 Score=23.54 Aligned_cols=10 Identities=40% Similarity=0.962 Sum_probs=4.1
Q ss_pred ccccCccccc
Q psy17723 86 DCKSCVACEK 95 (145)
Q Consensus 86 ~C~~C~vC~~ 95 (145)
+|-.|..|+.
T Consensus 35 ~CF~C~~C~~ 44 (76)
T 2cu8_A 35 FCLKCERCSK 44 (76)
T ss_dssp TTCBCSSSCC
T ss_pred CCCCCCCCCC
Confidence 3334444443
No 215
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=51.31 E-value=25 Score=21.72 Aligned_cols=26 Identities=15% Similarity=0.565 Sum_probs=15.6
Q ss_pred ccccccccccCCC-------------CCcEecCCCCCCc
Q psy17723 37 SDKCKACDRDTSA-------------GEMIQCGKCVRYL 62 (145)
Q Consensus 37 ~~~C~~C~~~~~~-------------~~ll~C~~C~~~~ 62 (145)
.-.|.+|+..... +..-.|..|++.|
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 66 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATF 66 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEE
T ss_pred CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEe
Confidence 3467778775431 4455666666666
No 216
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=51.25 E-value=19 Score=22.53 Aligned_cols=77 Identities=21% Similarity=0.397 Sum_probs=41.6
Q ss_pred ccccccccccCCC-CCcEecCCCCCCccccCCCCC-----CCCCC-cCCCCcccccccc------cCccccccccCC-Cc
Q psy17723 37 SDKCKACDRDTSA-GEMIQCGKCVRYLHPACLDLP-----GEMLP-HMKLYDWQCSDCK------SCVACEKAQDDD-KM 102 (145)
Q Consensus 37 ~~~C~~C~~~~~~-~~ll~C~~C~~~~H~~Cl~~~-----~~~~~-~~~~~~W~C~~C~------~C~vC~~~~~~~-~l 102 (145)
...|..|+..-.. +.+|.=. ++.||..|+.=. +.... ...++..+|..|- .|..|++.-..+ ..
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~--~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~~~~C~~C~~~I~~~~~~ 82 (101)
T 2cup_A 5 SSGCVECRKPIGADSKEVHYK--NRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQN 82 (101)
T ss_dssp CCBCSSSCCBCCSSSCEEEET--TEEEETTTCCCSSSCCCTTSSCCEEETTEEECHHHHTTCCCCBCSSSCCBCCSSSCE
T ss_pred CCcCcccCCcccCCceEEEEC--ccChhhcCCcccccCCCCCcCeeECcCCEEEChhHhhhhcCCccccCCCccccCCeE
Confidence 4578889887642 3444332 667887764331 11100 1123456676662 688888765422 22
Q ss_pred eecCCcccccccccc
Q psy17723 103 LFCDLCDRGYHNYCI 117 (145)
Q Consensus 103 l~Cd~C~~~yH~~Cl 117 (145)
|. .=++.||..|.
T Consensus 83 ~~--a~~~~~H~~CF 95 (101)
T 2cup_A 83 VE--YKGTVWHKDCF 95 (101)
T ss_dssp EE--SSSCEEETTTC
T ss_pred EE--eCCcchHHhCC
Confidence 22 33677887774
No 217
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=51.23 E-value=9.3 Score=21.66 Aligned_cols=29 Identities=28% Similarity=0.595 Sum_probs=23.5
Q ss_pred ccCccccccccCCCceecCCccccccccccc
Q psy17723 88 KSCVACEKAQDDDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 88 ~~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
.+|.+|++.-..+ +.|..|.--.|..|.+
T Consensus 15 t~C~~C~k~i~~G--~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMIFG--VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSCCE--EEETTTTEEESSSCTT
T ss_pred cCccccCceeECc--CCCCCCCCccchhhcC
Confidence 5788888765433 7899999999999976
No 218
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=50.43 E-value=3.5 Score=24.15 Aligned_cols=33 Identities=24% Similarity=0.660 Sum_probs=27.4
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...+|..|++.- ...-+.|..|+...|..|...
T Consensus 21 ~pt~C~~C~~~i-~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 21 GPGWCDLCGREV-LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp CCEECTTTCSEE-CSCCEECTTTSCEECHHHHTT
T ss_pred CCeEchhcchhh-hhCccEeCCCCCeEehhhhhh
Confidence 456899998766 567789999999999999865
No 219
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=49.88 E-value=15 Score=21.27 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=10.9
Q ss_pred CCCCCCccccccccch
Q psy17723 121 KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~ 136 (145)
.+|+ +|.||.|...+
T Consensus 32 ~lP~-dw~CP~Cga~K 46 (55)
T 2v3b_B 32 DIPA-DWVCPDCGVGK 46 (55)
T ss_dssp GSCT-TCCCTTTCCCG
T ss_pred HCCC-CCcCCCCCCCH
Confidence 3443 59999998754
No 220
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=49.59 E-value=7.7 Score=20.00 Aligned_cols=10 Identities=30% Similarity=1.115 Sum_probs=7.3
Q ss_pred CCcccccccc
Q psy17723 79 LYDWQCSDCK 88 (145)
Q Consensus 79 ~~~W~C~~C~ 88 (145)
...|.|+.|.
T Consensus 6 ~~~W~C~~CT 15 (34)
T 3a9j_C 6 GAQWNCTACT 15 (34)
T ss_dssp CCCEECTTTC
T ss_pred CCcCCCCCCc
Confidence 3489998774
No 221
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.38 E-value=24 Score=21.11 Aligned_cols=11 Identities=18% Similarity=0.555 Sum_probs=7.5
Q ss_pred ccccccccccC
Q psy17723 37 SDKCKACDRDT 47 (145)
Q Consensus 37 ~~~C~~C~~~~ 47 (145)
...|..|+..-
T Consensus 15 ~~~C~~C~~~I 25 (79)
T 1x62_A 15 LPMCDKCGTGI 25 (79)
T ss_dssp CCCCSSSCCCC
T ss_pred CCccccCCCCc
Confidence 45777777755
No 222
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=49.36 E-value=8.5 Score=19.43 Aligned_cols=27 Identities=26% Similarity=0.610 Sum_probs=15.6
Q ss_pred cCccccccccCCCceecCCcccccccccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCI 117 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl 117 (145)
.|..|++.-...+.+..+ ++.||..|.
T Consensus 5 ~C~~C~k~Vy~~Ek~~~~--g~~~Hk~CF 31 (31)
T 1zfo_A 5 NCARCGKIVYPTEKVNCL--DKFWHKACF 31 (31)
T ss_dssp BCSSSCSBCCGGGCCCSS--SSCCCGGGC
T ss_pred cCCccCCEEecceeEEEC--CeEecccCC
Confidence 466777655444444443 467777763
No 223
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.14 E-value=18 Score=22.32 Aligned_cols=11 Identities=18% Similarity=0.649 Sum_probs=7.1
Q ss_pred ccccccccccC
Q psy17723 37 SDKCKACDRDT 47 (145)
Q Consensus 37 ~~~C~~C~~~~ 47 (145)
...|..|+..-
T Consensus 25 ~~~C~~C~~~I 35 (90)
T 2dar_A 25 TPMCAHCNQVI 35 (90)
T ss_dssp CCBBSSSCCBC
T ss_pred CCCCccCCCEe
Confidence 45677777655
No 224
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=48.98 E-value=4.1 Score=28.35 Aligned_cols=43 Identities=12% Similarity=0.241 Sum_probs=26.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||...-.. ..+ -.|+..|+..|+. +.. +...||.|+..-.
T Consensus 80 ~C~IC~~~~~~-pv~--~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 80 MCVCCQELVYQ-PVT--TECFHNVCKDCLQRSFKA---QVFSCPACRHDLG 124 (150)
T ss_dssp BCTTTSSBCSS-EEE--CTTSCEEEHHHHHHHHHT---TCCBCTTTCCBCC
T ss_pred EeecCChhhcC-CEE--cCCCCchhHHHHHHHHHh---CCCcCCCCCccCC
Confidence 45566654322 222 3788888888886 332 4467999987643
No 225
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=48.51 E-value=17 Score=20.77 Aligned_cols=15 Identities=7% Similarity=0.182 Sum_probs=10.9
Q ss_pred CCCCCCccccccccch
Q psy17723 121 KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~ 136 (145)
.+|+ +|.||.|...+
T Consensus 32 ~lP~-dw~CP~Cg~~K 46 (52)
T 1e8j_A 32 DLPD-DWACPVCGASK 46 (52)
T ss_dssp SSCT-TCCCSSSCCCT
T ss_pred HCCC-CCcCCCCCCcH
Confidence 3444 59999998753
No 226
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=48.08 E-value=13 Score=22.40 Aligned_cols=10 Identities=10% Similarity=-0.150 Sum_probs=4.8
Q ss_pred CCCccccccc
Q psy17723 124 TVGLVFTLKK 133 (145)
Q Consensus 124 ~~~W~C~~C~ 133 (145)
++.-+|..|-
T Consensus 62 ~~~~~C~~c~ 71 (81)
T 1x6a_A 62 HATLYCGKCH 71 (81)
T ss_dssp SSCEEEHHHH
T ss_pred CCEEECHHHH
Confidence 3445555554
No 227
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=47.62 E-value=7.8 Score=19.51 Aligned_cols=9 Identities=33% Similarity=1.202 Sum_probs=6.7
Q ss_pred Ccccccccc
Q psy17723 80 YDWQCSDCK 88 (145)
Q Consensus 80 ~~W~C~~C~ 88 (145)
..|.|+.|.
T Consensus 5 ~~W~C~~CT 13 (31)
T 1nj3_A 5 AMWACQHCT 13 (31)
T ss_dssp CCEECSSSC
T ss_pred ccccCCccc
Confidence 479888774
No 228
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=47.61 E-value=20 Score=20.52 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=10.9
Q ss_pred CCCCCCccccccccch
Q psy17723 121 KIPTVGLVFTLKKKKN 136 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~ 136 (145)
.+|+ +|.||.|...+
T Consensus 31 ~lP~-dw~CP~Cg~~K 45 (52)
T 1yk4_A 31 DLPD-DWVCPLCGAPK 45 (52)
T ss_dssp GSCT-TCBCTTTCCBG
T ss_pred HCCC-CCcCCCCCCCH
Confidence 4444 59999998753
No 229
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=47.21 E-value=24 Score=21.48 Aligned_cols=16 Identities=0% Similarity=0.144 Sum_probs=11.4
Q ss_pred CCCCCCccccccccchh
Q psy17723 121 KIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~~ 137 (145)
.+|+ +|.||.|...+.
T Consensus 36 ~lPd-dw~CP~Cga~K~ 51 (70)
T 1dx8_A 36 DLSD-SFMCPACRSPKN 51 (70)
T ss_dssp GSCT-TCBCTTTCCBGG
T ss_pred hCCC-CCcCCCCCCCHH
Confidence 3454 599999987543
No 230
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=46.90 E-value=8.7 Score=27.09 Aligned_cols=15 Identities=7% Similarity=-0.077 Sum_probs=12.1
Q ss_pred CCCCccccccccchh
Q psy17723 123 PTVGLVFTLKKKKNK 137 (145)
Q Consensus 123 p~~~W~C~~C~~~~~ 137 (145)
.+..|+|..|.+.+.
T Consensus 105 ~~~~W~C~vC~k~re 119 (153)
T 2zet_C 105 EEQGWLCDPCHLARV 119 (153)
T ss_dssp SSSSCEEHHHHHHHH
T ss_pred CCCcEeeHHHHHHHH
Confidence 467899999998754
No 231
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=46.70 E-value=23 Score=22.37 Aligned_cols=16 Identities=19% Similarity=0.140 Sum_probs=11.4
Q ss_pred CCCCCCCccccccccch
Q psy17723 120 DKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 120 ~~~p~~~W~C~~C~~~~ 136 (145)
..+|+ +|.||.|...+
T Consensus 55 edlPd-dW~CPvCga~K 70 (81)
T 2kn9_A 55 DDIPD-DWSCPDCGAAK 70 (81)
T ss_dssp TTSCT-TCCCTTTCCCG
T ss_pred hHCCC-CCcCCCCCCCH
Confidence 34554 59999998754
No 232
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=46.32 E-value=6.4 Score=23.26 Aligned_cols=33 Identities=18% Similarity=0.469 Sum_probs=26.5
Q ss_pred ccccccccccC--CCCCcEecCCCCCCccccCCCC
Q psy17723 37 SDKCKACDRDT--SAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 37 ~~~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...|.+|++.- -...-+.|..|....|..|...
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 45899998763 2357789999999999999865
No 233
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.08 E-value=11 Score=23.36 Aligned_cols=34 Identities=21% Similarity=0.542 Sum_probs=27.2
Q ss_pred cccccccccccCC--CCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTS--AGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
...+|.+|+..-- ...-+.|..|....|..|+..
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 3568999987642 256789999999999999875
No 234
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=45.11 E-value=46 Score=20.25 Aligned_cols=34 Identities=26% Similarity=0.581 Sum_probs=24.3
Q ss_pred cccccccccccCCCCCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
.+..|.+|...........|..|..+|-..|+.+
T Consensus 29 ~~v~C~~C~~~~~~~A~ksCl~C~~s~C~~hl~~ 62 (78)
T 2ffw_A 29 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 62 (78)
T ss_dssp CCCBCSSCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCccCCcCCCCCCCCCeeEccCccchhhhhhhHh
Confidence 3578999985332357788999988877776664
No 235
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=43.21 E-value=10 Score=20.88 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=23.4
Q ss_pred cCcccccccc--CCCceecCCccccccccccc
Q psy17723 89 SCVACEKAQD--DDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 89 ~C~vC~~~~~--~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
+|.+|++.-. ...-+.|..|.-..|..|..
T Consensus 13 ~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 13 FCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp BCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 6778877543 24668899999999999976
No 236
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.03 E-value=51 Score=19.58 Aligned_cols=17 Identities=18% Similarity=0.698 Sum_probs=10.3
Q ss_pred CCcccccccccCcccccc
Q psy17723 79 LYDWQCSDCKSCVACEKA 96 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~ 96 (145)
...|+ ++|-.|.+|+..
T Consensus 36 ~~~~H-~~CF~C~~C~~~ 52 (82)
T 2ehe_A 36 DRHFH-EGCFRCCRCQRS 52 (82)
T ss_dssp SCCCB-TTTSBCTTTCCB
T ss_pred Ccccc-ccCCeecCCCCc
Confidence 34564 556677777764
No 237
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=41.60 E-value=38 Score=20.62 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=16.1
Q ss_pred CceecCCcccccccc-ccc---CCCCCCCCccccccccc
Q psy17723 101 KMLFCDLCDRGYHNY-CIG---LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 101 ~ll~Cd~C~~~yH~~-Cl~---l~~~p~~~W~C~~C~~~ 135 (145)
....|+.|++.|-.. =|. .....+..+.|+.|...
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 82 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG 82 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC
T ss_pred CCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc
Confidence 335566666655321 111 11122335777777654
No 238
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.21 E-value=12 Score=22.72 Aligned_cols=34 Identities=21% Similarity=0.531 Sum_probs=26.4
Q ss_pred cccccccccccCCC--CCcEecCCCCCCccccCCCC
Q psy17723 36 ESDKCKACDRDTSA--GEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~--~~ll~C~~C~~~~H~~Cl~~ 69 (145)
....|.+|+..--. ..-+.|..|...+|..|+..
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 34689999875421 35689999999999999875
No 239
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.98 E-value=14 Score=21.23 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.0
Q ss_pred CCCcccccccc
Q psy17723 78 KLYDWQCSDCK 88 (145)
Q Consensus 78 ~~~~W~C~~C~ 88 (145)
....|.|+.|.
T Consensus 8 ~~~~W~C~~CT 18 (53)
T 2d9g_A 8 DEGYWDCSVCT 18 (53)
T ss_dssp CCCCEECSSSC
T ss_pred CCCCcCCCCCc
Confidence 34689998774
No 240
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.39 E-value=25 Score=21.37 Aligned_cols=23 Identities=22% Similarity=0.768 Sum_probs=16.4
Q ss_pred cccccccccccCCCCCcE-----ecCCCCCCc
Q psy17723 36 ESDKCKACDRDTSAGEMI-----QCGKCVRYL 62 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll-----~C~~C~~~~ 62 (145)
....|..|+... .|. .| .|+..|
T Consensus 14 ~~~rC~~C~kk~---gL~~~egf~C-rCg~~F 41 (67)
T 1x4w_A 14 SRRRCFQCQTKL---ELVQQELGSC-RCGYVF 41 (67)
T ss_dssp CTTBCSSSCCBC---CHHHHHHHCC-SSSCCC
T ss_pred cCCcchhhCCee---cccccCceEe-cCCCEe
Confidence 346899999887 554 67 777665
No 241
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=39.28 E-value=4.3 Score=26.73 Aligned_cols=43 Identities=16% Similarity=0.325 Sum_probs=25.0
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.+|...-.. . +.- .|+..|+..|+. +... ...||.|+..-.
T Consensus 20 ~C~IC~~~~~~-p-~~~-~CgH~fC~~Ci~~~~~~~---~~~CP~Cr~~~~ 64 (118)
T 3hct_A 20 ECPICLMALRE-A-VQT-PCGHRFCKACIIKSIRDA---GHKCPVDNEILL 64 (118)
T ss_dssp BCTTTCSBCSS-E-EEC-TTSCEEEHHHHHHHHHHH---CSBCTTTCCBCC
T ss_pred CCCcCChhhcC-e-EEC-CcCChhhHHHHHHHHhhC---CCCCCCCCCCcC
Confidence 34466654322 2 222 688888888885 2211 238999986643
No 242
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=38.23 E-value=12 Score=23.84 Aligned_cols=30 Identities=30% Similarity=0.552 Sum_probs=24.0
Q ss_pred cCccccccccCCCceecCCcccccccccccC
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIGL 119 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~l 119 (145)
.|.+|+..+ .+..-.|..|+-..|+.|..+
T Consensus 49 ~C~~C~~~~-~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 49 TCDKCEEEG-TIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp CCTTTSCCC-CSCEEECTTTCCCCCHHHHHC
T ss_pred EeCCCCCcC-CCcEEEcCCCCCeEcHHhcCC
Confidence 677888764 456678999999999999853
No 243
>2lbz_A Thuricin17, thurincin H; helical loops, crosslinked, antimicrobial protein; HET: DSG 2TL DSN; NMR {Bacillus thuringiensis}
Probab=37.76 E-value=12 Score=18.74 Aligned_cols=15 Identities=47% Similarity=1.331 Sum_probs=9.9
Q ss_pred cccccccccCccccc
Q psy17723 81 DWQCSDCKSCVACEK 95 (145)
Q Consensus 81 ~W~C~~C~~C~vC~~ 95 (145)
+|.|-.|.+|..|.-
T Consensus 1 dwtcwsclvcaacsv 15 (31)
T 2lbz_A 1 DWTCWSCLVCAACSV 15 (31)
T ss_dssp CCCTTGGGGGGGCCS
T ss_pred CccHHHHHHHHHhHH
Confidence 477777767776653
No 244
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=37.37 E-value=19 Score=22.04 Aligned_cols=30 Identities=23% Similarity=0.587 Sum_probs=23.6
Q ss_pred cCcccccccc--CCCceecCCccccccccccc
Q psy17723 89 SCVACEKAQD--DDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 89 ~C~vC~~~~~--~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
+|.+|++.-. ...-+.|..|.-..|..|+.
T Consensus 36 ~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 67 (77)
T 2enn_A 36 FCSVCHEFVWGLNKQGYQCRQCNAAIHKKCID 67 (77)
T ss_dssp ECSSSCCEECCTTCCEEECSSSCCEEESGGGS
T ss_pred CccccChhhccccccccCcCCCCCcCCHhHHh
Confidence 6778887543 34568899999999999986
No 245
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=37.18 E-value=11 Score=22.53 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=21.5
Q ss_pred cccccccccccCCCCCcEecCCCCCC-ccccCCCC
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRY-LHPACLDL 69 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~-~H~~Cl~~ 69 (145)
.+..|.+|.+......+ ..|++. |...|+..
T Consensus 23 ~~~~C~iC~~~~~~~~~---~pCgH~~~C~~C~~~ 54 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVF---VPCGHLVTCKQCAEA 54 (74)
T ss_dssp HHTBCTTTSSSBCCEEE---ETTCCBCCCHHHHTT
T ss_pred cCCCCCCCCCCCCCEEE---cCCCChhHHHHhhhc
Confidence 45789999987632222 368888 88888764
No 246
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=36.77 E-value=28 Score=22.19 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=11.3
Q ss_pred CCCCCCCccccccccch
Q psy17723 120 DKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 120 ~~~p~~~W~C~~C~~~~ 136 (145)
..+|+ +|.||.|...+
T Consensus 63 edlPd-dW~CPvCga~K 78 (87)
T 1s24_A 63 EDIPD-DWCCPDCGATK 78 (87)
T ss_dssp GGCCT-TCCCSSSCCCG
T ss_pred hHCCC-CCCCCCCCCCH
Confidence 34554 59999998754
No 247
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=36.74 E-value=13 Score=22.08 Aligned_cols=12 Identities=33% Similarity=0.897 Sum_probs=6.5
Q ss_pred cccccCcccccc
Q psy17723 85 SDCKSCVACEKA 96 (145)
Q Consensus 85 ~~C~~C~vC~~~ 96 (145)
++|-.|..|+..
T Consensus 25 ~~CF~C~~C~~~ 36 (76)
T 1iml_A 25 RPCLKCEKCGKT 36 (76)
T ss_dssp TTTCBCTTTCCB
T ss_pred CCCCCccccCcc
Confidence 445556666543
No 248
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=36.62 E-value=6.4 Score=25.65 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=26.0
Q ss_pred cCccccccccCCCceecCCccccccccccc--CCCCCCCCccccccccch
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~~~p~~~W~C~~C~~~~ 136 (145)
.|.+|...-.+ .++ -.|+..||..|+. +.. +.-.||.|+..-
T Consensus 25 ~C~IC~~~~~~-p~~--~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~ 68 (116)
T 1rmd_A 25 SCQICEHILAD-PVE--TSCKHLFCRICILRCLKV---MGSYCPSCRYPC 68 (116)
T ss_dssp BCTTTCSBCSS-EEE--CTTSCEEEHHHHHHHHHH---TCSBCTTTCCBC
T ss_pred CCCCCCcHhcC-cEE--cCCCCcccHHHHHHHHhH---CcCcCCCCCCCC
Confidence 45577654322 222 3799999999986 322 134799998764
No 249
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=36.23 E-value=16 Score=23.05 Aligned_cols=31 Identities=23% Similarity=0.475 Sum_probs=23.5
Q ss_pred ccCcccccccc---CCCceecCCccccccccccc
Q psy17723 88 KSCVACEKAQD---DDKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 88 ~~C~vC~~~~~---~~~ll~Cd~C~~~yH~~Cl~ 118 (145)
.+|.+|++.-. ...-+.|--|...+|..|..
T Consensus 39 s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp CBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred CEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 58888887521 22447799999999999986
No 250
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.83 E-value=23 Score=20.89 Aligned_cols=31 Identities=23% Similarity=0.455 Sum_probs=17.4
Q ss_pred ccccccccccccCCCCCcEecCCCCCC-ccccCCC
Q psy17723 35 PESDKCKACDRDTSAGEMIQCGKCVRY-LHPACLD 68 (145)
Q Consensus 35 ~~~~~C~~C~~~~~~~~ll~C~~C~~~-~H~~Cl~ 68 (145)
..+..|.+|...... +.-.-|++. |...|+.
T Consensus 13 ~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~ 44 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVK 44 (68)
T ss_dssp CCSSCCSSSSSSCCC---CEETTTTBCCSCTTHHH
T ss_pred CCCCCCCCcCcCCCC---EEEECCCChhhhHHHHh
Confidence 346789999887632 222334444 4445543
No 251
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.19 E-value=18 Score=21.19 Aligned_cols=16 Identities=31% Similarity=1.026 Sum_probs=8.8
Q ss_pred CcccccccccCcccccc
Q psy17723 80 YDWQCSDCKSCVACEKA 96 (145)
Q Consensus 80 ~~W~C~~C~~C~vC~~~ 96 (145)
..|+ ++|-.|..|+..
T Consensus 29 ~~wH-~~CF~C~~C~~~ 44 (72)
T 1x4l_A 29 RQWH-NDCFNCKKCSLS 44 (72)
T ss_dssp CEEC-TTTCBCSSSCCB
T ss_pred cccC-cccCEeccCCCc
Confidence 3554 555566666653
No 252
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=33.79 E-value=31 Score=20.58 Aligned_cols=11 Identities=18% Similarity=0.555 Sum_probs=5.8
Q ss_pred cEecCCCCCCc
Q psy17723 52 MIQCGKCVRYL 62 (145)
Q Consensus 52 ll~C~~C~~~~ 62 (145)
...|..|+..|
T Consensus 8 ~~~C~~C~~~f 18 (96)
T 2dmd_A 8 PHKCEVCGKCF 18 (96)
T ss_dssp CCCBTTTTBCC
T ss_pred CeECCCCCCcc
Confidence 34555555555
No 253
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=33.67 E-value=23 Score=19.58 Aligned_cols=16 Identities=13% Similarity=0.385 Sum_probs=11.4
Q ss_pred CCCceecCCccccccc
Q psy17723 99 DDKMLFCDLCDRGYHN 114 (145)
Q Consensus 99 ~~~ll~Cd~C~~~yH~ 114 (145)
....|+|..|+.+|-.
T Consensus 21 ~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 21 ERGEIVCAKCGYVIEE 36 (50)
T ss_dssp TTTEEEESSSCCBCCC
T ss_pred CCCeEECcccCCcccc
Confidence 3455889999887743
No 254
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=33.39 E-value=70 Score=19.41 Aligned_cols=11 Identities=18% Similarity=0.555 Sum_probs=6.8
Q ss_pred ccccccccccC
Q psy17723 37 SDKCKACDRDT 47 (145)
Q Consensus 37 ~~~C~~C~~~~ 47 (145)
...|..|+..-
T Consensus 25 ~~~C~~C~~~I 35 (89)
T 1x64_A 25 MPLCDKCGSGI 35 (89)
T ss_dssp CCBCTTTCCBC
T ss_pred CCCcccCCCEe
Confidence 45677776654
No 255
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.98 E-value=13 Score=21.60 Aligned_cols=14 Identities=43% Similarity=1.277 Sum_probs=7.3
Q ss_pred cccccccccCccccc
Q psy17723 81 DWQCSDCKSCVACEK 95 (145)
Q Consensus 81 ~W~C~~C~~C~vC~~ 95 (145)
.|+ ++|-.|..|+.
T Consensus 26 ~~H-~~CF~C~~C~~ 39 (70)
T 2d8z_A 26 PWH-KECFVCTACRK 39 (70)
T ss_dssp EEE-TTTSBCSSSCC
T ss_pred ccC-CCCCccCCCCC
Confidence 453 44555555554
No 256
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=32.72 E-value=15 Score=21.64 Aligned_cols=38 Identities=11% Similarity=0.173 Sum_probs=22.7
Q ss_pred ccCCCceecCC--cccccccccccCCCCCCCCccccccccch
Q psy17723 97 QDDDKMLFCDL--CDRGYHNYCIGLDKIPTVGLVFTLKKKKN 136 (145)
Q Consensus 97 ~~~~~ll~Cd~--C~~~yH~~Cl~l~~~p~~~W~C~~C~~~~ 136 (145)
+.+...+.|.+ |...--.+|.-. .....|.|+.|...+
T Consensus 4 ~~~~~pvRC~r~~CraylNP~~~~~--~~~~~W~C~~C~~~N 43 (59)
T 2yrc_A 4 GSSGEPVLCSRTTCRAVLNPLCQVD--YRAKLWACNFCYQRN 43 (59)
T ss_dssp SSCCCCCBCSCTTTCCBCCTTSEEE--GGGTEEECSSSCCEE
T ss_pred cCCCCCcccCCCCCCeEECCceEEE--CCCCEEEcccCCCcC
Confidence 44556677877 866655555321 112369999987543
No 257
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=32.01 E-value=74 Score=19.63 Aligned_cols=25 Identities=16% Similarity=0.691 Sum_probs=15.6
Q ss_pred cccccccccccCCCCCcEecCCCCCCc
Q psy17723 36 ESDKCKACDRDTSAGEMIQCGKCVRYL 62 (145)
Q Consensus 36 ~~~~C~~C~~~~~~~~ll~C~~C~~~~ 62 (145)
....|..|+.....- -..| .|+..|
T Consensus 24 ~~~RC~~C~kkvgL~-~f~C-rCg~~F 48 (74)
T 1wfp_A 24 TATRCLSCNKKVGVT-GFKC-RCGSTF 48 (74)
T ss_dssp CCCBCSSSCCBCTTT-CEEC-TTSCEE
T ss_pred cCccchhhcCccccc-ceEe-ccCCEe
Confidence 346899999775111 2566 677665
No 258
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=31.59 E-value=19 Score=20.67 Aligned_cols=13 Identities=15% Similarity=0.460 Sum_probs=6.5
Q ss_pred CCceecCCccccc
Q psy17723 100 DKMLFCDLCDRGY 112 (145)
Q Consensus 100 ~~ll~Cd~C~~~y 112 (145)
+....|..|++.|
T Consensus 30 ekp~~C~~C~k~F 42 (60)
T 4gzn_C 30 YRPRSCPECGKCF 42 (60)
T ss_dssp CCCEECTTTCCEE
T ss_pred CcCeECCCCCCCc
Confidence 3444555555554
No 259
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=30.45 E-value=13 Score=23.44 Aligned_cols=33 Identities=24% Similarity=0.562 Sum_probs=24.1
Q ss_pred ccccccccccCCCCCcEecCCCCCCccccCCCC
Q psy17723 37 SDKCKACDRDTSAGEMIQCGKCVRYLHPACLDL 69 (145)
Q Consensus 37 ~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~ 69 (145)
+..|.+|.+.......+.|..|+.+|-..|+..
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 568999986433347788888888887777653
No 260
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=29.91 E-value=21 Score=20.55 Aligned_cols=17 Identities=24% Similarity=-0.132 Sum_probs=12.3
Q ss_pred CCCCCCccccccccchh
Q psy17723 121 KIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 121 ~~p~~~W~C~~C~~~~~ 137 (145)
.-+++.|.|+.|.+.+.
T Consensus 6 ~~~eD~WkC~~C~k~N~ 22 (53)
T 2cr8_A 6 SGSEDEWQCTECKKFNS 22 (53)
T ss_dssp SCCSCCEECSSSCCEEC
T ss_pred CCCcceeecccccccCC
Confidence 44677899999986544
No 261
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=29.60 E-value=25 Score=21.29 Aligned_cols=15 Identities=13% Similarity=0.171 Sum_probs=11.3
Q ss_pred CCceecCCccccccc
Q psy17723 100 DKMLFCDLCDRGYHN 114 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~ 114 (145)
...|+|..|+.+|=+
T Consensus 24 ~~~LiC~~cg~~YPI 38 (68)
T 2hf1_A 24 KDELICKGDRLAFPI 38 (68)
T ss_dssp TTEEEETTTTEEEEE
T ss_pred CCEEEcCCCCcEecC
Confidence 456789999888854
No 262
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=29.28 E-value=26 Score=20.07 Aligned_cols=9 Identities=11% Similarity=-0.178 Sum_probs=5.0
Q ss_pred Ccccccccc
Q psy17723 126 GLVFTLKKK 134 (145)
Q Consensus 126 ~W~C~~C~~ 134 (145)
.+.|+.|..
T Consensus 57 ~~~C~~C~~ 65 (82)
T 2kmk_A 57 PHKCQVCGK 65 (82)
T ss_dssp CEECTTTSC
T ss_pred CCcCCCcch
Confidence 456666654
No 263
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=29.23 E-value=25 Score=21.23 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=11.4
Q ss_pred CCceecCCccccccc
Q psy17723 100 DKMLFCDLCDRGYHN 114 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~ 114 (145)
...|+|..|+.+|=+
T Consensus 24 ~~~LiC~~cg~~YPI 38 (68)
T 2jr6_A 24 KQELWSRQAKLAYPI 38 (68)
T ss_dssp TTEEEETTTTEEEEE
T ss_pred CCEEEcCCCCcEecC
Confidence 456789999988854
No 264
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.13 E-value=27 Score=16.54 Aligned_cols=12 Identities=25% Similarity=1.052 Sum_probs=6.8
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|+.|++.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2els_A 8 KIFTCEYCNKVF 19 (36)
T ss_dssp CCEECTTTCCEE
T ss_pred CCEECCCCCcee
Confidence 445566666655
No 265
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=29.08 E-value=25 Score=21.36 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=12.0
Q ss_pred CCceecCCcccccccc
Q psy17723 100 DKMLFCDLCDRGYHNY 115 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~~ 115 (145)
...|+|..|+.+|=+.
T Consensus 24 ~~~LiC~~cg~~YPI~ 39 (70)
T 2js4_A 24 QAELVCNADRLAFPVR 39 (70)
T ss_dssp TTEEEETTTTEEEEEE
T ss_pred CCEEEcCCCCceecCC
Confidence 4567899999888543
No 266
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.77 E-value=13 Score=23.19 Aligned_cols=47 Identities=15% Similarity=0.293 Sum_probs=27.4
Q ss_pred cCccccccccCCCceecCCccccccccccc--CC-CCCC---CCccccc--cccc
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRGYHNYCIG--LD-KIPT---VGLVFTL--KKKK 135 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~yH~~Cl~--l~-~~p~---~~W~C~~--C~~~ 135 (145)
.|.||-..-....++.-..|+..|...|+. +. .+-+ ....||. |...
T Consensus 7 ~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 7 GCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp CCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 455666543344555445688777777774 21 1112 3578998 8765
No 267
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.66 E-value=31 Score=20.35 Aligned_cols=16 Identities=31% Similarity=0.985 Sum_probs=8.6
Q ss_pred CcccccccccCcccccc
Q psy17723 80 YDWQCSDCKSCVACEKA 96 (145)
Q Consensus 80 ~~W~C~~C~~C~vC~~~ 96 (145)
..|+ ++|-.|..|+..
T Consensus 29 ~~wH-~~CF~C~~C~~~ 44 (76)
T 1x68_A 29 SQWH-SECFNCGKCSVS 44 (76)
T ss_dssp EEEE-GGGCBCTTTCCB
T ss_pred cccC-cccCChhhCCCc
Confidence 3453 455566666653
No 268
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=28.56 E-value=21 Score=21.06 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=23.1
Q ss_pred cCccccccccC--CCceecCCccccccccccc
Q psy17723 89 SCVACEKAQDD--DKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 89 ~C~vC~~~~~~--~~ll~Cd~C~~~yH~~Cl~ 118 (145)
+|.+|+..-.+ ..-+.|..|.-..|..|+.
T Consensus 26 ~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 26 YCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred ChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 67788765432 3558899999999999986
No 269
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=28.53 E-value=27 Score=21.19 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=11.7
Q ss_pred CCCceecCCccccccc
Q psy17723 99 DDKMLFCDLCDRGYHN 114 (145)
Q Consensus 99 ~~~ll~Cd~C~~~yH~ 114 (145)
....|+|..|+.+|=+
T Consensus 23 ~~~~LiC~~cg~~YPI 38 (69)
T 2pk7_A 23 DKTELISKGAGLAYPI 38 (69)
T ss_dssp TSSEEEETTTTEEEEE
T ss_pred CCCEEEcCCCCcEecC
Confidence 3456789999888854
No 270
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.52 E-value=35 Score=19.16 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=14.5
Q ss_pred CCCCCCCccccccccchhh
Q psy17723 120 DKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 120 ~~~p~~~W~C~~C~~~~~~ 138 (145)
...+.+.|-|..|.-.+..
T Consensus 5 fk~~~gsW~C~~C~v~N~a 23 (47)
T 2ebr_A 5 SSGPEGSWDCELCLVQNKA 23 (47)
T ss_dssp CSSCCSSCCCSSSCCCCCS
T ss_pred ccCCCCeeECCeeecCCcC
Confidence 3567889999999877653
No 271
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=27.17 E-value=38 Score=17.90 Aligned_cols=7 Identities=29% Similarity=1.042 Sum_probs=2.8
Q ss_pred ecCCccc
Q psy17723 104 FCDLCDR 110 (145)
Q Consensus 104 ~Cd~C~~ 110 (145)
.|+.|++
T Consensus 31 ~C~~C~~ 37 (57)
T 1bbo_A 31 HCTYCNF 37 (57)
T ss_dssp ECSSSSC
T ss_pred cCCCCCc
Confidence 3444443
No 272
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.16 E-value=52 Score=19.41 Aligned_cols=10 Identities=30% Similarity=1.212 Sum_probs=4.2
Q ss_pred ccccCccccc
Q psy17723 86 DCKSCVACEK 95 (145)
Q Consensus 86 ~C~~C~vC~~ 95 (145)
+|-.|..|+.
T Consensus 40 ~CF~C~~C~~ 49 (80)
T 2cuq_A 40 ECLVCTGCQT 49 (80)
T ss_dssp TTCBCSSSCC
T ss_pred hhCCcccCCC
Confidence 3434444443
No 273
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=27.04 E-value=40 Score=19.71 Aligned_cols=30 Identities=33% Similarity=0.504 Sum_probs=23.7
Q ss_pred cCccccccccC-CCceecCCccccccccccc
Q psy17723 89 SCVACEKAQDD-DKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 89 ~C~vC~~~~~~-~~ll~Cd~C~~~yH~~Cl~ 118 (145)
.|.+|++.-.- ...+.|..|.-..|..|.+
T Consensus 21 ~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 21 SCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp ECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred ccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 78888765433 3568899999999999987
No 274
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.61 E-value=34 Score=16.16 Aligned_cols=12 Identities=25% Similarity=0.938 Sum_probs=6.8
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|+.|++.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elv_A 8 LLYDCHICERKF 19 (36)
T ss_dssp CCEECSSSCCEE
T ss_pred CCeECCCCCCcc
Confidence 445566666655
No 275
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=26.59 E-value=22 Score=20.55 Aligned_cols=13 Identities=0% Similarity=-0.440 Sum_probs=8.7
Q ss_pred CCccccccccchh
Q psy17723 125 VGLVFTLKKKKNK 137 (145)
Q Consensus 125 ~~W~C~~C~~~~~ 137 (145)
+.|+|..|--..-
T Consensus 35 dr~~C~kCgyt~~ 47 (55)
T 2k4x_A 35 DRYSCGRCGYTEF 47 (55)
T ss_dssp SEEECTTTCCCEE
T ss_pred CEEECCCCCCEEE
Confidence 4788888765543
No 276
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=26.58 E-value=5 Score=27.61 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=25.9
Q ss_pred CccccccccccccCCCCCcEecCCCCCCccccCCCCCC
Q psy17723 34 VPESDKCKACDRDTSAGEMIQCGKCVRYLHPACLDLPG 71 (145)
Q Consensus 34 ~~~~~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~~ 71 (145)
+..+..|.+|...-.. -+. ..|+..|+..|+..++
T Consensus 28 l~~~~~C~IC~~~~~~--pv~-~~CgH~FC~~Ci~~~~ 62 (141)
T 3knv_A 28 LEAKYLCSACRNVLRR--PFQ-AQCGHRYCSFCLASIL 62 (141)
T ss_dssp CCGGGBCTTTCSBCSS--EEE-CTTSCEEEHHHHHHHG
T ss_pred CCcCcCCCCCChhhcC--cEE-CCCCCccCHHHHHHHH
Confidence 4457789999987632 233 4899999999998754
No 277
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=26.09 E-value=34 Score=18.11 Aligned_cols=8 Identities=25% Similarity=1.074 Sum_probs=3.2
Q ss_pred ecCCcccc
Q psy17723 104 FCDLCDRG 111 (145)
Q Consensus 104 ~Cd~C~~~ 111 (145)
.|..|++.
T Consensus 34 ~C~~C~~~ 41 (57)
T 3uk3_C 34 KCEFCEYA 41 (57)
T ss_dssp ECSSSSCE
T ss_pred CCCCCcch
Confidence 34444433
No 278
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=25.74 E-value=25 Score=21.34 Aligned_cols=11 Identities=0% Similarity=0.009 Sum_probs=8.1
Q ss_pred ccccccccchh
Q psy17723 127 LVFTLKKKKNK 137 (145)
Q Consensus 127 W~C~~C~~~~~ 137 (145)
|.||.|+..-.
T Consensus 50 ~~CP~Cr~~i~ 60 (79)
T 2yho_A 50 QSCPVCRSRVE 60 (79)
T ss_dssp SBCTTTCCBCC
T ss_pred CcCCCCCchhh
Confidence 58999987643
No 279
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.67 E-value=43 Score=17.23 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=18.1
Q ss_pred CCceecCCcccccccc-ccc---CCCCCCCCccccccc
Q psy17723 100 DKMLFCDLCDRGYHNY-CIG---LDKIPTVGLVFTLKK 133 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~~-Cl~---l~~~p~~~W~C~~C~ 133 (145)
.....|+.|++.|-.. =|. .....+..+.|+.|.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~ 47 (48)
T 2epr_A 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47 (48)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 4456677777766432 121 112233458888875
No 280
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=25.46 E-value=39 Score=18.98 Aligned_cols=9 Identities=33% Similarity=1.328 Sum_probs=6.9
Q ss_pred Ccccccccc
Q psy17723 80 YDWQCSDCK 88 (145)
Q Consensus 80 ~~W~C~~C~ 88 (145)
..|.|..|.
T Consensus 12 D~WkC~~C~ 20 (46)
T 2c6a_A 12 DYWKCTSCN 20 (46)
T ss_dssp GCEECTTTC
T ss_pred ceEeccccc
Confidence 689888773
No 281
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=25.14 E-value=33 Score=20.67 Aligned_cols=15 Identities=13% Similarity=0.321 Sum_probs=11.2
Q ss_pred CCceecCCccccccc
Q psy17723 100 DKMLFCDLCDRGYHN 114 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~ 114 (145)
...|+|..|+.+|=+
T Consensus 26 ~g~LvC~~c~~~YPI 40 (67)
T 2jny_A 26 EQLLVNERLNLAYRI 40 (67)
T ss_dssp TTEEEETTTTEEEEE
T ss_pred CCEEEcCCCCccccC
Confidence 455789999888854
No 282
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=25.09 E-value=20 Score=18.99 Aligned_cols=12 Identities=0% Similarity=-0.255 Sum_probs=9.3
Q ss_pred CCCccccccccc
Q psy17723 124 TVGLVFTLKKKK 135 (145)
Q Consensus 124 ~~~W~C~~C~~~ 135 (145)
.+.|+|..|-.-
T Consensus 19 S~gw~CqaC~nf 30 (38)
T 4cpa_I 19 SGAWFCQACWNS 30 (38)
T ss_dssp CCCSSCCEEETT
T ss_pred ccchHHHHHHhh
Confidence 578999998654
No 283
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=24.98 E-value=28 Score=19.97 Aligned_cols=9 Identities=44% Similarity=1.461 Sum_probs=7.1
Q ss_pred Ccccccccc
Q psy17723 80 YDWQCSDCK 88 (145)
Q Consensus 80 ~~W~C~~C~ 88 (145)
..|.|+.|.
T Consensus 9 ~~W~Cp~CT 17 (52)
T 2crc_A 9 VGWQCPGCT 17 (52)
T ss_dssp SSBCCTTTC
T ss_pred CCccCCCcc
Confidence 489999874
No 284
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.77 E-value=47 Score=19.61 Aligned_cols=14 Identities=14% Similarity=0.510 Sum_probs=8.5
Q ss_pred CCcEecCCCCCCcc
Q psy17723 50 GEMIQCGKCVRYLH 63 (145)
Q Consensus 50 ~~ll~C~~C~~~~H 63 (145)
+....|..|+..|-
T Consensus 5 ~~~~~C~~C~~~f~ 18 (95)
T 2yt9_A 5 SSGVACEICGKIFR 18 (95)
T ss_dssp CSCEECSSSCCEES
T ss_pred CCCeECCCCCCccC
Confidence 35566777766663
No 285
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=24.56 E-value=56 Score=20.68 Aligned_cols=36 Identities=0% Similarity=-0.273 Sum_probs=24.7
Q ss_pred CCccccccccccccCCCCCcEecCCCC-CCccccCCCCCC
Q psy17723 33 PVPESDKCKACDRDTSAGEMIQCGKCV-RYLHPACLDLPG 71 (145)
Q Consensus 33 ~~~~~~~C~~C~~~~~~~~ll~C~~C~-~~~H~~Cl~~~~ 71 (145)
.++.+-.|.+|...-.. -+ ...|+ ..|-..|+..++
T Consensus 18 ~~p~~~~CpI~~~~m~d--PV-~~~cG~htf~r~cI~~~l 54 (98)
T 1wgm_A 18 DACDEFLDPIMSTLMCD--PV-VLPSSRVTVDRSTIARHL 54 (98)
T ss_dssp SCCTTTBCTTTCSBCSS--EE-ECTTTCCEEEHHHHHHHT
T ss_pred cCcHhcCCcCccccccC--Ce-ECCCCCeEECHHHHHHHH
Confidence 45667899999987632 22 23577 888888887654
No 286
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=24.15 E-value=9.4 Score=31.04 Aligned_cols=30 Identities=20% Similarity=0.520 Sum_probs=22.9
Q ss_pred cccccccccCCCCCcEecCCCCCCccccCCCCC
Q psy17723 38 DKCKACDRDTSAGEMIQCGKCVRYLHPACLDLP 70 (145)
Q Consensus 38 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~~~ 70 (145)
..|.+|.+.. .-..-..|++.||..|+..+
T Consensus 333 ~~C~ICle~~---~~pv~lpCGH~FC~~Ci~~w 362 (389)
T 2y1n_A 333 QLCKICAEND---KDVKIEPCGHLMCTSCLTSW 362 (389)
T ss_dssp SBCTTTSSSB---CCEEEETTCCEECHHHHHHH
T ss_pred CCCCccCcCC---CCeEEeCCCChhhHHHHHHH
Confidence 6899998876 33344679999999999654
No 287
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=24.01 E-value=35 Score=22.36 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=18.9
Q ss_pred CCcccccccccCcccccccc-------CCCceecCCcc-ccccccc
Q psy17723 79 LYDWQCSDCKSCVACEKAQD-------DDKMLFCDLCD-RGYHNYC 116 (145)
Q Consensus 79 ~~~W~C~~C~~C~vC~~~~~-------~~~ll~Cd~C~-~~yH~~C 116 (145)
...|+ ++|-.|.+|+..-. .+..++|..|. +.|...|
T Consensus 29 ~~~~H-~~CF~C~~C~~~L~~g~~f~~~~g~~yC~~cy~~~~~~~~ 73 (123)
T 2l3k_A 29 DKVYH-LECFKCAACQKHFSVGDRYLLINSDIVCEQDIYEWTKING 73 (123)
T ss_dssp SCCCC-TTTCBCTTTCCBCCTTCEEEECSSSEEEGGGHHHHHHHHT
T ss_pred Ccccc-cccCccccCCCCCCCCCcEEeeCCEEEcHHHhHHHhcccc
Confidence 34553 45667777776431 12345666663 2344444
No 288
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=23.61 E-value=57 Score=23.67 Aligned_cols=11 Identities=0% Similarity=-0.152 Sum_probs=8.7
Q ss_pred ccccccccchh
Q psy17723 127 LVFTLKKKKNK 137 (145)
Q Consensus 127 W~C~~C~~~~~ 137 (145)
|.||.|...+.
T Consensus 187 ~~CP~C~~~k~ 197 (202)
T 1yuz_A 187 EKCPICFRPKD 197 (202)
T ss_dssp SBCTTTCCBGG
T ss_pred CCCCCCCCChH
Confidence 99999986543
No 289
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=23.02 E-value=72 Score=17.20 Aligned_cols=19 Identities=37% Similarity=0.847 Sum_probs=15.4
Q ss_pred CCceecCCccccccccccc
Q psy17723 100 DKMLFCDLCDRGYHNYCIG 118 (145)
Q Consensus 100 ~~ll~Cd~C~~~yH~~Cl~ 118 (145)
...|.|..|+++|-..|..
T Consensus 9 ~~yl~CE~C~~~~~~~Cp~ 27 (39)
T 2l9z_A 9 LFTIWCTLCDRAYPSDCPE 27 (39)
T ss_dssp SCSEEEGGGTEEESSSBTT
T ss_pred hhhhHHHHHhhhchhhchh
Confidence 3558899999998888874
No 290
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.88 E-value=42 Score=15.67 Aligned_cols=10 Identities=30% Similarity=1.245 Sum_probs=4.6
Q ss_pred eecCCccccc
Q psy17723 103 LFCDLCDRGY 112 (145)
Q Consensus 103 l~Cd~C~~~y 112 (145)
..|+.|++.|
T Consensus 10 ~~C~~C~k~f 19 (36)
T 2elr_A 10 HLCDMCGKKF 19 (36)
T ss_dssp CBCTTTCCBC
T ss_pred eecCcCCCCc
Confidence 3445554444
No 291
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=22.55 E-value=32 Score=20.58 Aligned_cols=11 Identities=36% Similarity=0.938 Sum_probs=5.0
Q ss_pred cccccCccccc
Q psy17723 85 SDCKSCVACEK 95 (145)
Q Consensus 85 ~~C~~C~vC~~ 95 (145)
++|-.|..|+.
T Consensus 32 ~~CF~C~~C~~ 42 (81)
T 1a7i_A 32 RCCFLCMVCRK 42 (81)
T ss_dssp SSSEECSSSCC
T ss_pred cccCccCCCCC
Confidence 34444444444
No 292
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.05 E-value=47 Score=15.47 Aligned_cols=12 Identities=25% Similarity=0.431 Sum_probs=6.5
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|+.|++.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elt_A 8 KPYKCPQCSYAS 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCCCCCCCCccc
Confidence 344566666554
No 293
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=22.05 E-value=21 Score=23.41 Aligned_cols=52 Identities=19% Similarity=0.345 Sum_probs=27.3
Q ss_pred cCccccccc-cCCCceecCCccccccc--cccc----CCCC---CCCCccccccccchhhhh
Q psy17723 89 SCVACEKAQ-DDDKMLFCDLCDRGYHN--YCIG----LDKI---PTVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 89 ~C~vC~~~~-~~~~ll~Cd~C~~~yH~--~Cl~----l~~~---p~~~W~C~~C~~~~~~~~ 140 (145)
.|.+|++.- ..+....|+.|++-|=. +|-+ |+.. -..++||..|..=..|+|
T Consensus 34 ~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC~~chgLiSKkR 95 (101)
T 2jne_A 34 HCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKR 95 (101)
T ss_dssp BCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEETTTTEEECTTT
T ss_pred cCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhhccCCceeecce
Confidence 334555421 12334558888765532 4443 3222 234789998876655544
No 294
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.90 E-value=45 Score=19.50 Aligned_cols=20 Identities=15% Similarity=-0.077 Sum_probs=15.5
Q ss_pred CCCCCCCCccccccccchhh
Q psy17723 119 LDKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 119 l~~~p~~~W~C~~C~~~~~~ 138 (145)
+-..+.+.|-|..|.-.+..
T Consensus 24 ~FK~~~GsWeC~~C~V~N~a 43 (57)
T 2ebv_A 24 KFKRPIGSWECSVCCVSNNA 43 (57)
T ss_dssp CCCCCSSSCCCSSSCCCCCS
T ss_pred hcCCCCCeeeCCeeEccCcc
Confidence 45667899999999877653
No 295
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.87 E-value=48 Score=15.56 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=6.2
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|..|++.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elq_A 8 KPFKCSLCEYAT 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCccCCCCCchh
Confidence 344555555544
No 296
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=21.55 E-value=68 Score=27.24 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=27.1
Q ss_pred ccccccccccc--CCCCCcEecCCCCCCccccCCCCC
Q psy17723 36 ESDKCKACDRD--TSAGEMIQCGKCVRYLHPACLDLP 70 (145)
Q Consensus 36 ~~~~C~~C~~~--~~~~~ll~C~~C~~~~H~~Cl~~~ 70 (145)
....|.+|+.. |-...-+.|..|+..+|..|....
T Consensus 112 ~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 112 SPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp SCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSS
T ss_pred CCCCCCccccccchhhcCccccccCCcchhhhhhhcc
Confidence 35689999775 323467899999999999998653
No 297
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=21.20 E-value=70 Score=18.64 Aligned_cols=8 Identities=38% Similarity=1.435 Sum_probs=3.8
Q ss_pred cccccccc
Q psy17723 110 RGYHNYCI 117 (145)
Q Consensus 110 ~~yH~~Cl 117 (145)
+.||..|.
T Consensus 40 ~~~H~~CF 47 (77)
T 2egq_A 40 QSWHDYCF 47 (77)
T ss_dssp EEEETTTC
T ss_pred ceeCcccC
Confidence 44555444
No 298
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.16 E-value=42 Score=19.82 Aligned_cols=40 Identities=10% Similarity=0.014 Sum_probs=20.1
Q ss_pred cCccccccccCCCceecCCcccc-cccccccCCCCCCCCccccccccchh
Q psy17723 89 SCVACEKAQDDDKMLFCDLCDRG-YHNYCIGLDKIPTVGLVFTLKKKKNK 137 (145)
Q Consensus 89 ~C~vC~~~~~~~~ll~Cd~C~~~-yH~~Cl~l~~~p~~~W~C~~C~~~~~ 137 (145)
.|.||......-.+ -.|+.. |...|+. ....||.|+..-.
T Consensus 27 ~C~IC~~~~~~~~~---~pCgH~~~C~~C~~------~~~~CP~Cr~~i~ 67 (75)
T 2ecg_A 27 LCKICMDRNIAIVF---VPCGHLVTCKQCAE------AVDKCPMCYTVIT 67 (75)
T ss_dssp SCSSSCSSCCCBCC---SSSCCCCBCHHHHH------HCSBCTTTCCBCC
T ss_pred CCCcCCCCCCCEEE---ecCCCHHHHHHHhh------CCCCCccCCceec
Confidence 45566543222222 245554 5555553 1257888876543
No 299
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.02 E-value=50 Score=15.58 Aligned_cols=12 Identities=25% Similarity=0.733 Sum_probs=6.4
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|+.|++.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elp_A 8 RAMKCPYCDFYF 19 (37)
T ss_dssp CCEECSSSSCEE
T ss_pred CCeECCCCChhh
Confidence 334566665554
No 300
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.95 E-value=80 Score=19.45 Aligned_cols=37 Identities=5% Similarity=0.312 Sum_probs=21.5
Q ss_pred CCCceecCCccccccccc-cc---CCCCCCCCccccccccc
Q psy17723 99 DDKMLFCDLCDRGYHNYC-IG---LDKIPTVGLVFTLKKKK 135 (145)
Q Consensus 99 ~~~ll~Cd~C~~~yH~~C-l~---l~~~p~~~W~C~~C~~~ 135 (145)
......|+.|++.|-..= |. .....+..+.|+.|...
T Consensus 63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 103 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQ 103 (124)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCE
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccch
Confidence 345577899988774321 11 11123346889988765
No 301
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=20.93 E-value=27 Score=18.22 Aligned_cols=15 Identities=13% Similarity=-0.082 Sum_probs=10.7
Q ss_pred CCCCccccccccchh
Q psy17723 123 PTVGLVFTLKKKKNK 137 (145)
Q Consensus 123 p~~~W~C~~C~~~~~ 137 (145)
..|.|-|..|.-.+.
T Consensus 4 ~~G~W~C~~C~v~N~ 18 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNK 18 (34)
T ss_dssp --CCEECTTTCCEEC
T ss_pred CCCceECCeeEeECc
Confidence 568899999987654
No 302
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=20.89 E-value=25 Score=22.32 Aligned_cols=21 Identities=19% Similarity=0.012 Sum_probs=12.7
Q ss_pred CCCCCCCccccccccchhhhh
Q psy17723 120 DKIPTVGLVFTLKKKKNKKKK 140 (145)
Q Consensus 120 ~~~p~~~W~C~~C~~~~~~~~ 140 (145)
...+.++|.|+.|...+...+
T Consensus 59 f~~~~g~W~C~~C~~~N~a~~ 79 (92)
T 3gj8_B 59 FKKPEGSWDCEVCLVQNKADS 79 (92)
T ss_dssp -----CCEECTTTCCEECSSC
T ss_pred cCCCCCcccCCcCCcCChhhc
Confidence 345679999999987765443
No 303
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=20.85 E-value=7.5 Score=22.69 Aligned_cols=11 Identities=27% Similarity=0.259 Sum_probs=8.7
Q ss_pred Cccccccccch
Q psy17723 126 GLVFTLKKKKN 136 (145)
Q Consensus 126 ~W~C~~C~~~~ 136 (145)
.+.||.|+..-
T Consensus 44 ~~~CPiCR~~i 54 (63)
T 2vje_B 44 GASCPICKKEI 54 (63)
T ss_dssp TCBCTTTCCBC
T ss_pred CCcCCCcCchh
Confidence 47999999764
No 304
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.76 E-value=1.3e+02 Score=17.64 Aligned_cols=15 Identities=33% Similarity=1.143 Sum_probs=7.9
Q ss_pred cccccccccCcccccc
Q psy17723 81 DWQCSDCKSCVACEKA 96 (145)
Q Consensus 81 ~W~C~~C~~C~vC~~~ 96 (145)
.|+ ++|-.|.+|+..
T Consensus 38 ~~H-~~CF~C~~C~~~ 52 (82)
T 1x63_A 38 VWH-KDCFTCSNCKQV 52 (82)
T ss_dssp EEE-TTTCCCSSSCCC
T ss_pred ccc-cccCchhhCCCc
Confidence 443 445555666553
No 305
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=20.39 E-value=42 Score=14.59 Aligned_cols=11 Identities=36% Similarity=1.066 Sum_probs=6.6
Q ss_pred eecCCcccccc
Q psy17723 103 LFCDLCDRGYH 113 (145)
Q Consensus 103 l~Cd~C~~~yH 113 (145)
..|+.|++.|.
T Consensus 4 ~~C~~C~~~f~ 14 (30)
T 2m0d_A 4 YQCDYCGRSFS 14 (30)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 45666766653
No 306
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=20.26 E-value=58 Score=17.38 Aligned_cols=6 Identities=67% Similarity=1.885 Sum_probs=2.4
Q ss_pred cCCccc
Q psy17723 105 CDLCDR 110 (145)
Q Consensus 105 Cd~C~~ 110 (145)
|..|++
T Consensus 33 C~~C~~ 38 (60)
T 2adr_A 33 CGLCNR 38 (60)
T ss_dssp CTTTCC
T ss_pred CCCCCC
Confidence 444433
No 307
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.25 E-value=40 Score=18.95 Aligned_cols=19 Identities=11% Similarity=-0.261 Sum_probs=14.0
Q ss_pred CCCCCCCccccccccchhh
Q psy17723 120 DKIPTVGLVFTLKKKKNKK 138 (145)
Q Consensus 120 ~~~p~~~W~C~~C~~~~~~ 138 (145)
...+.|.|-|..|.-.+..
T Consensus 5 ~~~~~g~W~C~~C~v~N~a 23 (47)
T 2ebq_A 5 SSGVIGTWDCDTCLVQNKP 23 (47)
T ss_dssp CCCCSSSEECSSSCCEECS
T ss_pred cCCCCCceECCeeeccCcc
Confidence 3456789999999876653
No 308
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=20.20 E-value=49 Score=15.33 Aligned_cols=12 Identities=17% Similarity=0.813 Sum_probs=7.3
Q ss_pred CceecCCccccc
Q psy17723 101 KMLFCDLCDRGY 112 (145)
Q Consensus 101 ~ll~Cd~C~~~y 112 (145)
....|+.|++.|
T Consensus 6 k~~~C~~C~k~f 17 (35)
T 1srk_A 6 RPFVCRICLSAF 17 (35)
T ss_dssp SCEECSSSCCEE
T ss_pred cCeeCCCCCccc
Confidence 445567776665
No 309
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.20 E-value=46 Score=15.34 Aligned_cols=13 Identities=23% Similarity=0.618 Sum_probs=7.7
Q ss_pred CceecCCcccccc
Q psy17723 101 KMLFCDLCDRGYH 113 (145)
Q Consensus 101 ~ll~Cd~C~~~yH 113 (145)
....|+.|++.|-
T Consensus 6 k~~~C~~C~k~f~ 18 (35)
T 2elx_A 6 SGYVCALCLKKFV 18 (35)
T ss_dssp CSEECSSSCCEES
T ss_pred CCeECCCCcchhC
Confidence 3456777776653
No 310
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=20.10 E-value=45 Score=14.37 Aligned_cols=9 Identities=33% Similarity=0.837 Sum_probs=4.9
Q ss_pred ecCCccccc
Q psy17723 104 FCDLCDRGY 112 (145)
Q Consensus 104 ~Cd~C~~~y 112 (145)
.|+.|++.|
T Consensus 5 ~C~~C~k~f 13 (27)
T 2kvh_A 5 SCSLCPQRS 13 (27)
T ss_dssp ECSSSSCEE
T ss_pred cCCCcChhh
Confidence 455555554
Done!