Query psy17727
Match_columns 261
No_of_seqs 189 out of 1397
Neff 7.5
Searched_HMMs 13730
Date Fri Aug 16 21:26:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17727.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17727hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k62b_ a.127.1.1 (B:) Arginin 100.0 2.4E-59 1.7E-63 441.9 20.8 236 25-260 2-239 (459)
2 d1tj7a_ a.127.1.1 (A:) Arginin 100.0 4.1E-58 3E-62 433.0 20.7 235 26-260 1-238 (455)
3 d1tjva_ a.127.1.1 (A:) Arginin 100.0 7.8E-56 5.7E-60 416.7 20.5 225 36-260 2-228 (449)
4 d1j3ua_ a.127.1.1 (A:) L-aspar 100.0 6.6E-50 4.8E-54 377.1 17.5 248 3-260 1-275 (462)
5 d1vdka_ a.127.1.1 (A:) Fumaras 100.0 5.4E-49 3.9E-53 370.4 18.3 246 4-260 1-276 (460)
6 d1yfma_ a.127.1.1 (A:) Fumaras 100.0 3.9E-49 2.9E-53 370.8 16.7 247 3-260 2-278 (459)
7 d1jswa_ a.127.1.1 (A:) L-aspar 100.0 2.6E-48 1.9E-52 365.5 20.0 247 3-260 5-282 (459)
8 d1fuoa_ a.127.1.1 (A:) Fumaras 100.0 2.3E-46 1.7E-50 352.2 18.9 247 3-260 1-276 (456)
9 d1f1oa_ a.127.1.1 (A:) Adenylo 100.0 2.3E-46 1.7E-50 348.1 17.3 212 38-260 2-216 (408)
10 d1re5a_ a.127.1.1 (A:) 3-carbo 100.0 1.8E-46 1.3E-50 352.6 14.9 226 25-260 2-236 (448)
11 d1q5na_ a.127.1.1 (A:) 3-carbo 100.0 2.3E-45 1.6E-49 344.6 14.7 224 26-260 2-237 (444)
12 d1c3ca_ a.127.1.1 (A:) Adenylo 100.0 4.9E-43 3.6E-47 327.4 18.8 214 30-260 3-223 (429)
13 d1dofa_ a.127.1.1 (A:) Adenylo 100.0 6.9E-42 5E-46 317.2 18.4 218 26-260 4-227 (402)
14 d1b9ma1 a.4.5.8 (A:-1-126) N-t 41.5 39 0.0029 23.0 6.8 52 167-218 58-113 (127)
15 d2nn4a1 a.272.1.1 (A:1-62) Hyp 35.2 41 0.003 20.6 5.1 42 37-80 9-50 (62)
16 d2gfna1 a.4.1.9 (A:4-80) Proba 34.9 27 0.002 21.6 4.5 39 112-150 30-69 (77)
17 d2fbqa1 a.4.1.9 (A:2-80) Trans 32.5 51 0.0037 20.3 6.5 65 76-152 4-69 (79)
18 d1vi0a1 a.4.1.9 (A:6-77) Hypot 30.2 31 0.0022 21.0 4.1 41 112-152 25-66 (72)
19 d2pxrc1 a.73.1.1 (C:1-145) HIV 29.5 15 0.0011 26.7 2.6 52 125-188 43-94 (145)
20 d1zk8a1 a.4.1.9 (A:6-77) Trans 28.9 54 0.0039 19.8 5.2 31 112-142 27-58 (72)
21 d1ui5a1 a.4.1.9 (A:5-75) A-fac 27.5 43 0.0031 20.3 4.5 53 77-141 6-59 (71)
22 d2g7sa1 a.4.1.9 (A:3-76) Putat 26.5 49 0.0036 20.1 4.6 56 75-143 3-60 (74)
23 d1ixca1 a.4.5.37 (A:1-89) LysR 26.4 75 0.0054 20.2 6.5 43 167-210 41-83 (89)
24 d2np5a1 a.4.1.9 (A:9-77) Trans 25.1 40 0.0029 20.2 3.9 39 112-150 25-64 (69)
25 d1rkta1 a.4.1.9 (A:2-82) Hypot 25.0 73 0.0053 19.6 6.0 40 112-151 35-75 (81)
26 d2i10a1 a.4.1.9 (A:10-78) Puta 24.6 16 0.0012 22.4 1.8 42 112-153 24-66 (69)
27 d2gena1 a.4.1.9 (A:6-75) Proba 22.8 74 0.0054 18.9 5.7 41 112-152 24-65 (70)
28 d1wmua_ a.1.1.2 (A:) Hemoglobi 21.4 84 0.0061 21.6 5.6 96 72-178 1-97 (141)
29 d1t56a1 a.4.1.9 (A:22-94) Ethr 21.2 82 0.0059 18.8 5.0 32 112-144 27-60 (73)
30 d1rxqa_ a.213.1.1 (A:) YfiT {B 21.1 1.3E+02 0.0092 21.0 7.0 36 178-213 137-172 (174)
31 d2id6a1 a.4.1.9 (A:1-75) Trans 20.9 47 0.0034 20.3 3.6 40 112-151 27-67 (75)
No 1
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-59 Score=441.91 Aligned_cols=236 Identities=34% Similarity=0.545 Sum_probs=229.6
Q ss_pred hhhcccccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCceeccCCc
Q psy17727 25 QLWTGCFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVELKVELE 104 (261)
Q Consensus 25 ~l~~~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~ 104 (261)
++|||||++++++.+..|+.|..+|++|++|+|++.+||+.||.++|+||++++++|.++|+++..+...+.|++++..+
T Consensus 2 klW~gr~~~~~~~~~~~f~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~I~~al~~i~~~~~~~~~~~~~~~e 81 (459)
T d1k62b_ 2 KLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLTKAEMDQILHGLDKVAEEWAQGTFKLNSNDE 81 (459)
T ss_dssp CSSCSCCCCSSCHHHHHTTCCHHHHGGGHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCTTCC
T ss_pred CCCCccCCcchhHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999888888999999999
Q ss_pred chhhhHHHHHHHHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCcccc
Q psy17727 105 DIHMNIESELIRRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQP 184 (261)
Q Consensus 105 dv~~~ie~~l~~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P 184 (261)
|+|+++|.++.+.+|+.++|||+|+||||++||+++|++|+++..|.+.|..++++|.++|++|++|+||||||+|+|||
T Consensus 82 d~~~~ie~~l~~~~g~~~~~vH~G~S~nD~~~Ta~~L~~r~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P 161 (459)
T d1k62b_ 82 DIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQP 161 (459)
T ss_dssp SHHHHHHHHHHHTTSSGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEE
T ss_pred chHHHHHHHHHHhhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccceecceeecccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc--ChHHHHhhcCCCCCCCCcccccchhhHHHHhcC
Q psy17727 185 ISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT--TTNATAPELGLDSPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 185 ~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~--~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~ 260 (261)
||||||+++|+++|.|+++||.+++++++.+|||||+++|+++ +++++++.|||..+..|+++|+++||+++|+++
T Consensus 162 ~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lGg~a~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~sRd~~~e~~~ 239 (459)
T d1k62b_ 162 IRWSHWILSHAVALTRDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSERDFVAEFLF 239 (459)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCTTCTTTTCCTTCCCHHHHHHHTTCSCBCSCHHHHHHCCHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCcccchhhhhhHHhhccccccchhhhhcchHHHHHHH
Confidence 9999999999999999999999999999999999999988888 999999999999999999999999999999864
No 2
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.1e-58 Score=433.02 Aligned_cols=235 Identities=35% Similarity=0.565 Sum_probs=224.6
Q ss_pred hhcccccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCce-eccCCc
Q psy17727 26 LWTGCFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVE-LKVELE 104 (261)
Q Consensus 26 l~~~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~-~~~~~~ 104 (261)
+|||||++++++.+..|+.|..+|++|++|+|++.+||+.||.++|+||++++++|.++|+++..++..+.+. .++..|
T Consensus 1 lw~gr~~~~~~~~~~~f~~s~~~D~~l~~~di~~~~Aha~~l~~~gii~~~~~~~I~~al~~i~~~~~~~~~~~~~~~~e 80 (455)
T d1tj7a_ 1 LWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAE 80 (455)
T ss_dssp CCCTTCSSCCCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGSCCS
T ss_pred CCCccCCCcccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHcCCCccCCCCcc
Confidence 6999999999999999999999999999999999999999999999999999999999999998876666554 466789
Q ss_pred chhhhHHHHHHHHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCcccc
Q psy17727 105 DIHMNIESELIRRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQP 184 (261)
Q Consensus 105 dv~~~ie~~l~~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P 184 (261)
|+|+++|.+|.+++|+.|+|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|++|+||||||+|+|||
T Consensus 81 dv~~~ie~~l~~~~g~~~~~vH~G~S~nD~~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~GrTH~Q~A~P 160 (455)
T d1tj7a_ 81 DIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQP 160 (455)
T ss_dssp SHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEE
T ss_pred cHHHHHHHHHHhhcCcchhhccCCccchhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhchhhhHHHHhhhccc
Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc--ChHHHHhhcCCCCCCCCcccccchhhHHHHhcC
Q psy17727 185 ISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT--TTNATAPELGLDSPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 185 ~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~--~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~ 260 (261)
||||||+++|+++|.||++||.+++++++++|+|||+++|+++ +++++++.|||..+..|+++|+++||+++++++
T Consensus 161 ~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lG~~a~~g~~~~~~~~~~a~~Lg~~~~~~n~~~~~~~rd~~~e~~~ 238 (455)
T d1tj7a_ 161 VTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS 238 (455)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcCcchHHHHHHHhCCCcccCCccchhhchHHHHHHHH
Confidence 9999999999999999999999999999999999999989988 899999999999888899999999999999864
No 3
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]}
Probab=100.00 E-value=7.8e-56 Score=416.73 Aligned_cols=225 Identities=36% Similarity=0.521 Sum_probs=218.2
Q ss_pred HHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHH
Q psy17727 36 NEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELI 115 (261)
Q Consensus 36 ~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~ 115 (261)
++.++.|+.|..||++|++++|++++||+++|.++|+||++++++|.++|+++..+...+.|++++..||+|+++|.+|.
T Consensus 2 ~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~Gii~~~~~~~I~~al~~i~~~~~~~~~~~~~~~edi~~~ie~~l~ 81 (449)
T d1tjva_ 2 DPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWSKGVFVVKQSDEDIHTANERRLK 81 (449)
T ss_dssp CHHHHHHHCCTTTGGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCTTCCSHHHHHHHHHH
T ss_pred cHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCccchHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred HHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHH
Q psy17727 116 RRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYA 195 (261)
Q Consensus 116 ~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~ 195 (261)
+++|+.|+|||+|+||||+++|+++|++|+++..|.+.|..++++|.++|++|++|+||||||+|+|||||||||+++|+
T Consensus 82 e~~G~~~~~vh~G~S~nD~~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~GrTH~Q~A~P~T~G~~~~~~~ 161 (449)
T d1tjva_ 82 ELIGDIAGKLHTGRSRNDQVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYDHLQKAQPIRWSQFLLSHA 161 (449)
T ss_dssp HHHCGGGGGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHhChhhhhcCcCCCccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhhhccCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccccCCCCc--ChHHHHhhcCCCCCCCCcccccchhhHHHHhcC
Q psy17727 196 SMFRRDIERLLDCRRRVNVNPLGSAALGAPHT--TTNATAPELGLDSPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 196 ~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~--~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~ 260 (261)
++|.|+++||.+++++++.+|||||+++|+++ +++++++.+||..+..|+++|+++||+++++++
T Consensus 162 ~~l~r~~~rl~~~~~~~~~~~lGg~a~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~rd~~~e~~~ 228 (449)
T d1tjva_ 162 VALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLS 228 (449)
T ss_dssp HHHHHHHHHHHHHHHHHSEECTTCTTTTCCTTCCCHHHHHHHHTCSEECSCHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccccccccchhhHHHHHHHHhhhcccCCccchhhccchHHHHHH
Confidence 99999999999999999999999999988888 999999999999889999999999999999865
No 4
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]}
Probab=100.00 E-value=6.6e-50 Score=377.10 Aligned_cols=248 Identities=20% Similarity=0.207 Sum_probs=212.8
Q ss_pred cccCCCccccccCCCCCchhhhhhhcccccchHHHHHHhccccc-chhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy17727 3 LDIPEDNEEGEQDTPDKPKELKQLWTGCFQQSMNEFLQQFNESI-SVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELI 81 (261)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I 81 (261)
||||+|-= |+.+.| . .+|||. +|.+.+++|+.+. .+...+++...++..|.|++++++|+||++.+++|
T Consensus 1 ~r~e~d~~-g~~~~~---~--~~~~g~----~t~r~~~nf~i~~~~~~~~~i~a~~~vk~A~A~an~~~G~i~~~~a~aI 70 (462)
T d1j3ua_ 1 VRIEKDFL-GEKEIP---K--DAYYGV----QTIRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYI 70 (462)
T ss_dssp CCEEEETT-EEEECC---T--TCCCCH----HHHHHHHHCCSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CCccccCC-CCccCC---c--ccchhH----HHHHHHHcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 68899988 999999 3 569998 9999999998754 34444555555556666677899999999999999
Q ss_pred HHHHHHHHhhhhCCCceecc----CCcchhhhHHHHHHHHh----C-ccC--------CccccCCChhhHHHHHHHHHHH
Q psy17727 82 VKTLKDIEYDIEHGKVELKV----ELEDIHMNIESELIRRI----G-NVG--------RKLHTGRSRNDQVVLDLRLFTR 144 (261)
Q Consensus 82 ~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l~~~~----g-~~g--------~~iH~G~SsnDi~~Ta~~L~lr 144 (261)
.++|+++..+...+.|++++ .+++.+|++++++.+++ | +.| .|||+|+|||||+||+++|++|
T Consensus 71 ~~a~~ei~~~~~~~~f~~d~~~~g~gt~~~~~~~e~i~~~~~~~~g~~~g~~~~~~p~~~vH~G~SsnDi~~Ta~~L~lr 150 (462)
T d1j3ua_ 71 VKAADEVIEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVL 150 (462)
T ss_dssp HHHHHHHHTTSCGGGCCSCSSCSGGGHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccccceehHhhccchhhhhhhhhhhHHHHHHhcCCcCCCccccccchhhhhccchhhHHHHHHHHHHH
Confidence 99999999887778888876 57788888888777654 4 233 3699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCC
Q psy17727 145 RNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGA 224 (261)
Q Consensus 145 ~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~G 224 (261)
+++..|.+.|..|+++|.++|++|++|+||||||+|+||||||||||++|+++|.|+++||.+++++++.+|+||+++++
T Consensus 151 ~~l~~l~~~l~~l~~~L~~~A~~~~~tvm~GRTHlQ~A~PiTfG~~~~~~~~~l~r~~~RL~~~~~~l~~~~lGg~a~g~ 230 (462)
T d1j3ua_ 151 SLLNQLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRNNLYDINMGATAVGT 230 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTTGGGSEECTTCTTTSS
T ss_pred HHhhhhhhHHHHHHHHHHHHHHhhccccchhHHhCccccceeHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999844
Q ss_pred CCc-Ch-------HHHHhhcCCC-CCCCCcccccchhhHHHHhcC
Q psy17727 225 PHT-TT-------NATAPELGLD-SPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 225 t~~-~~-------~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~ 260 (261)
+.+ ++ ..+++.+|+. .+..|+++|+++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rD~~~e~~~ 275 (462)
T d1j3ua_ 231 GLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSS 275 (462)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCSCCEECSSHHHHHHCCHHHHHHHH
T ss_pred ccCCcchhhhhhhHhHhhhhccccccccchHHHhhhhHHHHHHHH
Confidence 433 32 3467778877 567788999999999999875
No 5
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=5.4e-49 Score=370.43 Aligned_cols=246 Identities=17% Similarity=0.206 Sum_probs=209.4
Q ss_pred ccCCCccccccCCCCCchhhhhhhcccccchHHHHHHhcccccc-hh--hhccHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q psy17727 4 DIPEDNEEGEQDTPDKPKELKQLWTGCFQQSMNEFLQQFNESIS-VD--EVLYREDIAGSIAHVTMLGERNIIDEQDKEL 80 (261)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~f~~~~~-~~--~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~ 80 (261)
|||+|-- |+.+.| . .+|||. +|.+.+++|+.+.. +. ..+++....+..|.|++++++|+||++.+++
T Consensus 1 r~e~d~~-g~~~vp---~--~~~~g~----~t~r~~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~lG~i~~~~a~a 70 (460)
T d1vdka_ 1 RIERDTM-GEVRVP---A--DKYWGA----QTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKA 70 (460)
T ss_dssp CEEEETT-EEEECC---T--TCCCCH----HHHHHHHHCCSSTTTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred CCccCCC-cCccCC---c--cccchH----HHHHHHHccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 5777877 888888 3 579998 99999999987652 11 1223333334455566778999999999999
Q ss_pred HHHHHHHHHhhhhCCCceecc----CCcchhhhHHHHHHHHh----C--------ccCCccccCCChhhHHHHHHHHHHH
Q psy17727 81 IVKTLKDIEYDIEHGKVELKV----ELEDIHMNIESELIRRI----G--------NVGRKLHTGRSRNDQVVLDLRLFTR 144 (261)
Q Consensus 81 I~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l~~~~----g--------~~g~~iH~G~SsnDi~~Ta~~L~lr 144 (261)
|.++|++|..+...+.|+++. .++..||++++++.+++ | ..+.|||+|+||||++|||++|+++
T Consensus 71 I~~a~~ei~~g~~~~~f~~~~~q~g~gt~~nmn~nevia~~a~~~~~~~~~~~~vhp~~~vh~g~SsnD~~~Ta~~l~~~ 150 (460)
T d1vdka_ 71 IIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVA 150 (460)
T ss_dssp HHHHHHHHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCSSCCCCCCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcchhcCcchHhhhccccccccchhHHHHHHHHhhhcccccccccChhhHHHhcccHHHHHHHHHHHHHH
Confidence 999999999887778888865 68899999999998865 2 1235788999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccC
Q psy17727 145 RNIK-ALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALG 223 (261)
Q Consensus 145 ~~l~-~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~ 223 (261)
+.+. .|.+.|..|+++|.++|++|++|+|+||||+|+|+|||||++|++|+++|.|+++||.+++++++.+||||+++
T Consensus 151 ~~l~~~l~~~L~~L~~~L~~~A~~~~~t~m~GRTHlQ~A~PiT~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGGaAv- 229 (460)
T d1vdka_ 151 LALHQRLYPAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAV- 229 (460)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHGGGGEECTTCTTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCeeehhhhhcccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCccc-
Confidence 9986 68999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCc---C------hHHHHhhcCCC-CCCCCcccccchhhHHHHhcC
Q psy17727 224 APHT---T------TNATAPELGLD-SPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 224 Gt~~---~------~~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~ 260 (261)
||+. + .+++++.|||+ .+..|.++|+++||+++++++
T Consensus 230 Gt~~~~~~~~~~~~~~~la~~lGl~~~~~~n~~~~~~~rD~~~e~~~ 276 (460)
T d1vdka_ 230 GTGLNAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMG 276 (460)
T ss_dssp SSCTTSCTTHHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHhCcCccccCCchhheecchhHHHHHH
Confidence 5543 2 26789999998 456788999999999999865
No 6
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.9e-49 Score=370.82 Aligned_cols=247 Identities=17% Similarity=0.194 Sum_probs=212.0
Q ss_pred cccCCCccccccCCCCCchhhhhhhcccccchHHHHHHhcccccc---hhhhccHHHHHHHHHHHHHHHhcCCCCHHHHH
Q psy17727 3 LDIPEDNEEGEQDTPDKPKELKQLWTGCFQQSMNEFLQQFNESIS---VDEVLYREDIAGSIAHVTMLGERNIIDEQDKE 79 (261)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~f~~~~~---~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~ 79 (261)
.|||.|-= |+.+.| . .+|||. +|++.+++|+.+.. +...+++....+..|.|++++++|+||++.++
T Consensus 2 ~r~e~d~~-g~~~vp---~--~~~~G~----~T~ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~lG~l~~~~a~ 71 (459)
T d1yfma_ 2 FRTETDAF-GEIHVP---A--DKYWGA----QTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISK 71 (459)
T ss_dssp EEEECSSS-CCEEEE---S--SCCCCH----HHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred CCCcccCC-CCccCC---c--ccchhH----HHHHHHHCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 47888887 888888 3 579998 99999999988642 23344444455556667778999999999999
Q ss_pred HHHHHHHHHHhhhhCCCceecc----CCcchhhhHHHHHHHHhC-----c-------cCCccccCCChhhHHHHHHHHHH
Q psy17727 80 LIVKTLKDIEYDIEHGKVELKV----ELEDIHMNIESELIRRIG-----N-------VGRKLHTGRSRNDQVVLDLRLFT 143 (261)
Q Consensus 80 ~I~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l~~~~g-----~-------~g~~iH~G~SsnDi~~Ta~~L~l 143 (261)
+|.++|++|..+...+.|+++. .++++||++++++.++.. . .+.+||+|+||||+++||++|++
T Consensus 72 aI~~a~~ei~~g~~~~~f~~~~~q~g~gt~~nmn~nevia~~a~~~~~~~~~~~~vhp~d~v~~gqSsnD~~~Ta~~l~~ 151 (459)
T d1yfma_ 72 AIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAA 151 (459)
T ss_dssp HHHHHHHHHHHTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC---------CCCCCCCTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccccccchHHhhccccccccchhhhhHHHHHHHhhccccccccCcchhhhhccchHhhhhhHHHHHH
Confidence 9999999999887778888765 788999999999998762 1 23468999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q psy17727 144 RRNIK-ALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAAL 222 (261)
Q Consensus 144 r~~l~-~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~ 222 (261)
+..+. .|.+.|..|+++|.++|++|++|+||||||+|+|+||||||||++|+++|.|+++||.+++++++.+||||+++
T Consensus 152 ~~~~~~~L~~~L~~L~~~L~~kA~e~~~~im~GRTHlQ~A~PiT~G~~~~~~~~~l~r~~~RL~~~~~~l~~~~lGgta~ 231 (459)
T d1yfma_ 152 SLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAV 231 (459)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCeeehhHhhCCcCCCeeHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccchh
Confidence 87775 79999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCc----C-----hHHHHhhcCCC-CCCCCcccccchhhHHHHhcC
Q psy17727 223 GAPHT----T-----TNATAPELGLD-SPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 223 ~Gt~~----~-----~~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~ 260 (261)
||++ + ...+++.|||. .+..|.++|+++||+++|+++
T Consensus 232 -gtg~~a~~~~~~~v~~~l~~~lgl~~~~~~n~~~a~~~rD~~~e~~~ 278 (459)
T d1yfma_ 232 -GTGLNTKPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSG 278 (459)
T ss_dssp -SSCTTSCTTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHH
T ss_pred -hccccCCCcchHHHHHHHHHHcCCCCcccCchHHHHcCChhHHHHHH
Confidence 5543 1 24688999998 556788999999999999875
No 7
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.6e-48 Score=365.52 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=211.3
Q ss_pred cccCCCccccccCCCCCchhhhhhhcccccchHHHHHHhcccccc-hhh--hccHHHHHHHHHHHHHHHhcCCCCHHHHH
Q psy17727 3 LDIPEDNEEGEQDTPDKPKELKQLWTGCFQQSMNEFLQQFNESIS-VDE--VLYREDIAGSIAHVTMLGERNIIDEQDKE 79 (261)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~f~~~~~-~~~--~l~~~~i~~~lA~~~~l~~~Gii~~~~a~ 79 (261)
.|||+|-= |+.+.| . .+|||. +|.+.+++|+.+.. +.. .+++....+..|.|+++.++|+||++.++
T Consensus 5 ~r~e~d~~-g~~~vp---~--~~~~g~----~t~ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~~G~i~~~~a~ 74 (459)
T d1jswa_ 5 IRIEEDLL-GTREVP---A--DAYYGV----HTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVAN 74 (459)
T ss_dssp EEEEECSS-CEEEEE---S--SCCCCH----HHHHHHHHCCSCSCCSCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred CeeeecCC-cCccCC---c--ccchhH----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 57888887 888888 3 579998 99999999998752 221 23444455555556778999999999999
Q ss_pred HHHHHHHHHHh-hhhCCCceecc----CCcchhhhHHHHHHHHh----C-c--------cCCccccCCChhhHHHHHHHH
Q psy17727 80 LIVKTLKDIEY-DIEHGKVELKV----ELEDIHMNIESELIRRI----G-N--------VGRKLHTGRSRNDQVVLDLRL 141 (261)
Q Consensus 80 ~I~~al~~i~~-~~~~~~~~~~~----~~~dv~~~ie~~l~~~~----g-~--------~g~~iH~G~SsnDi~~Ta~~L 141 (261)
+|.++|+++.. +...+.|+++. .++..+|++++++.+++ | + .+.|||+|+||||++||+++|
T Consensus 75 aI~~a~~evi~~g~~~~~f~~d~~q~g~gt~~nmn~nevia~~a~~~~g~~~g~~~~v~p~~~Vh~G~SsnDi~~Ta~~L 154 (459)
T d1jswa_ 75 AIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRI 154 (459)
T ss_dssp HHHHHHHHHSTTTCSTTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchhhhcchhhhhhhhhhhhccchhHHHHHHHHhcCCccCCccccchhhhhhccCchhhhHHHHHHH
Confidence 99999999863 33456788765 68899999999999875 2 1 235899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc
Q psy17727 142 FTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAA 221 (261)
Q Consensus 142 ~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a 221 (261)
++|+++..|.+.|..|+++|.++|++|++|+|+||||+|||+|||||+||++|+++|.|+++||.+++++++.+||||++
T Consensus 155 ~~~~~l~~L~~~L~~L~~~L~~~A~~~~~tvm~GRTHlQ~A~PiTfG~~~~~~~~~l~r~~~rl~~~~~~l~~~~lGg~A 234 (459)
T d1jswa_ 155 AVYSSLIKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATA 234 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCeeeecHhhcccCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCc---------ChHHHHhhcCCC-CCCCCcccccchhhHHHHhcC
Q psy17727 222 LGAPHT---------TTNATAPELGLD-SPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 222 ~~Gt~~---------~~~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~ 260 (261)
+ |++. +...+++.+|++ .+..|.++|+++||+++++++
T Consensus 235 ~-gt~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~rD~~~e~~~ 282 (459)
T d1jswa_ 235 I-GTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHG 282 (459)
T ss_dssp S-SSCSSCTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHH
T ss_pred c-ccccccccchhHHHHHHHHHhccccccccchhhhhhcchHHHHHHHH
Confidence 8 5543 235688999998 567788999999999999864
No 8
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.3e-46 Score=352.18 Aligned_cols=247 Identities=17% Similarity=0.241 Sum_probs=204.3
Q ss_pred cccCCCccccccCCCCCchhhhhhhcccccchHHHHHHhccccc-chhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy17727 3 LDIPEDNEEGEQDTPDKPKELKQLWTGCFQQSMNEFLQQFNESI-SVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELI 81 (261)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I 81 (261)
+|||.|-- |+.+.| . .+|||+ ++++..++|+.+. .+...+++....+..|+|+++.++|+||++++++|
T Consensus 1 ~r~e~d~~-g~~~~~---~--~~l~G~----~t~r~~~~F~i~~~~~~~~~i~a~~~vK~A~A~a~~~~Gli~~~~a~aI 70 (456)
T d1fuoa_ 1 VRSEKDSM-GAIDVP---A--DKLWGA----QTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 70 (456)
T ss_dssp CEEEEETT-EEEEEC---T--TCCCCH----HHHHHHHHCCCSSCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCcccCCC-CCccCC---c--cCcchH----hhHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 68999988 999998 3 579999 7889999997654 22223333333344455677889999999999999
Q ss_pred HHHHHHHHhhhhCCCceecc----CCcchhhhHHHHHHHH----hCcc---------CCccccCCChhhHHHHHHHHHHH
Q psy17727 82 VKTLKDIEYDIEHGKVELKV----ELEDIHMNIESELIRR----IGNV---------GRKLHTGRSRNDQVVLDLRLFTR 144 (261)
Q Consensus 82 ~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l~~~----~g~~---------g~~iH~G~SsnDi~~Ta~~L~lr 144 (261)
.++|++|..+...+.|+++. .+.+.+++++.++.++ +|.. +.++|+|+|+||+++|+++++.+
T Consensus 71 ~~a~~eI~~~~~~~~f~~~~~~~g~g~~~~~~v~~vi~~~~~e~~g~~~~~~~~~~~~~~v~~~~s~~d~~~ta~~l~~~ 150 (456)
T d1fuoa_ 71 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAAL 150 (456)
T ss_dssp HHHHHHHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcccccchHHHHhhcchhhcchhHHHHHHHHHHHhCcccccccccchhhHHHHhhhhhhhhhHHHHHHHH
Confidence 99999999888788888764 4566677777776554 4422 34688999999999999999776
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccC
Q psy17727 145 RNI-KALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALG 223 (261)
Q Consensus 145 ~~l-~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~ 223 (261)
..+ +.+.+.|..|+++|.++|++|++|+||||||+|+||||||||||++|+++|.||++||.+++++++.+||||+++
T Consensus 151 ~~~~~~l~~~l~~l~~~L~~~A~~~~~tvm~GrTHlQ~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~~lGGaa~- 229 (456)
T d1fuoa_ 151 LALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAV- 229 (456)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTTTCEECCEETTEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTT-
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhcCceeccHHhcCCCCCEehHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCcc-
Confidence 666 579999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCc--Ch-------HHHHhhcCCC-CCCCCcccccchhhHHHHhcC
Q psy17727 224 APHT--TT-------NATAPELGLD-SPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 224 Gt~~--~~-------~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~ 260 (261)
||++ ++ ..++..+|++ .+..|+++|+++||+++|+++
T Consensus 230 Gt~~~~~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~~rD~~~e~~~ 276 (456)
T d1fuoa_ 230 GTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHG 276 (456)
T ss_dssp SSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHH
T ss_pred cCccccChHHHHHHHHHhhhcccCCceeccCHHHHHHhhhHHHHHHH
Confidence 6654 32 4467777877 567899999999999999875
No 9
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=2.3e-46 Score=348.07 Aligned_cols=212 Identities=17% Similarity=0.205 Sum_probs=180.9
Q ss_pred HHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHHHH
Q psy17727 38 FLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELIRR 117 (261)
Q Consensus 38 ~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~~~ 117 (261)
+.+.|+..+.++.++ +|+ .|+++++.+.|+||++++++|.++++.........+ ...++|+ ++++++|+++
T Consensus 2 m~~ifs~~~~~~~~l---~ve--~A~a~a~~e~G~ip~~~~~~i~~~~~~~~~~~~~~~---~~~~~~v-~a~~~~L~e~ 72 (408)
T d1f1oa_ 2 MSAIWTDENRFQAWL---EVE--ILACEAWAELGVIPKEDVKVMRENASFDINRILEIE---KDTRHDV-VAFTRAVSES 72 (408)
T ss_pred hHHHCCcHHHHHHHH---HHH--HHHHHHHHHCCCCCHHHHHHHHHhCcCCHHHHHHHH---hhcCCcH-HHHHHHHHHH
Confidence 456788777665533 555 566788999999999999999887642222111111 1257888 4899999999
Q ss_pred hCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHHHHHHHHHHH
Q psy17727 118 IGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLGHYLLAYASM 197 (261)
Q Consensus 118 ~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~ 197 (261)
+|+.++|||+|+||||++||+++|++|+++..+.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++
T Consensus 73 ~g~~~~~vH~G~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~ 152 (408)
T d1f1oa_ 73 LGEERKWVHYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEE 152 (408)
T ss_pred cCchhhhhcCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccchHhcCCCCCccHHHHHHHHHHH
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCccccCCCCc---ChHHHHhhcCCCCCCCCcccccchhhHHHHhcC
Q psy17727 198 FRRDIERLLDCRRRVNVNPLGSAALGAPHT---TTNATAPELGLDSPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 198 l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~---~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~ 260 (261)
|.|+++||.+++++++.+||||++|+|+++ ++..+++.|||..+..+ +|+++||+++|+++
T Consensus 153 l~r~~~rL~~~~~~~~~~~lGGA~Gt~~~~~~~~~~~~~~~lg~~~~~~~--~~~~~rd~~~e~~~ 216 (408)
T d1f1oa_ 153 MKRNLERFKQAKAGIEVGKISGAVGTYANIDPFVEQYVCEKLGLKAAPIS--TQTLQRDRHADYMA 216 (408)
T ss_pred HHHHHHHHHHHHHhhhccccchhhhcccCCChhHHHHHHHHhcCcCCCch--HHHHHHHHHHHHHH
Confidence 999999999999999999999887666665 56889999999865544 49999999999875
No 10
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]}
Probab=100.00 E-value=1.8e-46 Score=352.58 Aligned_cols=226 Identities=18% Similarity=0.173 Sum_probs=182.5
Q ss_pred hhhcccccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCceeccCCc
Q psy17727 25 QLWTGCFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVELKVELE 104 (261)
Q Consensus 25 ~l~~~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~ 104 (261)
.+|+++|+++ ++.+.|++...++. .+.+..|+++++++.|+||++++++|.++|+....+...-.-.....++
T Consensus 2 ~l~~~~y~~~--~~~~ifsd~~~~~~-----~l~ve~A~a~a~~e~G~ip~~~~~~I~~~~~~~~~d~~~~~~~~~~~~~ 74 (448)
T d1re5a_ 2 QLFDAYFTAP--AMREIFSDRGRLQG-----MLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGN 74 (448)
T ss_dssp CTTHHHHSCH--HHHHHTSHHHHHHH-----HHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCGGGSCHHHHHHHHHHHSS
T ss_pred cccccccCcH--HHHHHhChHHHHHH-----HHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccCcCHHHHHHHHhHhcC
Confidence 5899999874 47888998766544 3444455567899999999999999998875433221110001112455
Q ss_pred chhh---hHHHHHHHHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCc
Q psy17727 105 DIHM---NIESELIRRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQF 181 (261)
Q Consensus 105 dv~~---~ie~~l~~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~ 181 (261)
++.. ++++.+.+.+|+.++|||+|+|||||++|+++|++|+++..+.+.|..++++|.++|++|++|+||||||+|+
T Consensus 75 ~~~~~v~~~~~~~~~~~g~~~~~vH~G~TsnDi~~Ta~~L~lr~~~~~l~~~l~~l~~~L~~~a~~~~~~~m~grTH~Q~ 154 (448)
T d1re5a_ 75 SAIPLVKALGKVIATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQH 154 (448)
T ss_dssp SHHHHHHHHHHHHHHHCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEE
T ss_pred CcHHHHHHHHHHHhhcCcchHhHccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 6532 2333444445677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc------ChHHHHhhcCCCCCCCCcccccchhhHH
Q psy17727 182 AQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT------TTNATAPELGLDSPRGDSLESIWRPGFT 255 (261)
Q Consensus 182 A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~------~~~~la~~LGl~~~~~n~~~~~~~rD~~ 255 (261)
||||||||||++|+++|.|+++||.+++++++.+||||++++++++ ..+.+++.|||..+. .+|+++||++
T Consensus 155 A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~~~~~~~~~~~~~~~l~~~lgl~~~~---~~~~~~rd~~ 231 (448)
T d1re5a_ 155 ATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLPE---QPWHTQRDRL 231 (448)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCCTTSSCGGGGGGHHHHHHHHHHHHTCBCCS---SCCTTCCHHH
T ss_pred HhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhhhcccCcCccchhcccchhHHHHHHHHHHhCCCCCC---CcchHhhhHH
Confidence 9999999999999999999999999999999999999988866665 346789999997554 3489999999
Q ss_pred HHhcC
Q psy17727 256 IESGH 260 (261)
Q Consensus 256 ~e~~~ 260 (261)
+++++
T Consensus 232 ~e~~~ 236 (448)
T d1re5a_ 232 VEFAS 236 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 11
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=100.00 E-value=2.3e-45 Score=344.64 Aligned_cols=224 Identities=21% Similarity=0.256 Sum_probs=183.7
Q ss_pred hhcccccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCcee--ccCC
Q psy17727 26 LWTGCFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVEL--KVEL 103 (261)
Q Consensus 26 l~~~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~--~~~~ 103 (261)
+|+++|+++ ++.+.|++.. ++.+.+++..|+++++.++|+||++.+++|.++++.+...+..+.+.- ...+
T Consensus 2 ~~~~~~~~~--~~~~ifsd~~-----~i~~~~~ve~a~a~a~~~~g~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 74 (444)
T d1q5na_ 2 LYASLFYQR--DVTEIFSDRA-----LVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAG 74 (444)
T ss_dssp TTHHHHSCH--HHHHHTSHHH-----HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHHHHCCHHHHHHHHHHHS
T ss_pred ccccccCCH--HHHHHcChHH-----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhcccc
Confidence 678888774 4777888744 446677888888999999999999999999998865543322222211 1123
Q ss_pred cchhhhHHHHHHHHh---C-ccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccC
Q psy17727 104 EDIHMNIESELIRRI---G-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHF 179 (261)
Q Consensus 104 ~dv~~~ie~~l~~~~---g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~ 179 (261)
++ +++++..+...+ + +.++|||+|+|||||++|+++|++|+++..+.+.+..++++|.++|++|+||+||||||+
T Consensus 75 ~~-~~~~v~~l~~~~~~~~~~~~~~vh~g~ts~Di~~ta~~l~~~~~~~~l~~~l~~l~~~l~~~a~~~~~~~m~grTH~ 153 (444)
T d1q5na_ 75 NI-AIPFVKQLTAIVKDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHQVMMGRTWL 153 (444)
T ss_dssp SS-HHHHHHHHHHHHHTTCTTGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred cc-hHHHHHHHHHHHhhcCcchHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhhhHHHHh
Confidence 33 356776666543 3 668899999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc--Ch----HHHHhhcCCCCCCCCcccccchhh
Q psy17727 180 QFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT--TT----NATAPELGLDSPRGDSLESIWRPG 253 (261)
Q Consensus 180 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~--~~----~~la~~LGl~~~~~n~~~~~~~rD 253 (261)
|+||||||||||++|+++|.|+++||.+++++++.+||||++++|+++ ++ +.+++.||+.. |+.+|+++||
T Consensus 154 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~~~~~~~~~~~~~~~l~~~l~l~~---~~~~~~~~rd 230 (444)
T d1q5na_ 154 QQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGGAVGSLASLQDQGSIVVEAYAKQLKLGQ---TACTWHGERD 230 (444)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCCTTSSCGGGTTCHHHHHHHHHHHHTCBC---CSSCCSSCCH
T ss_pred hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHhhhcccccc---cccchhhhhH
Confidence 999999999999999999999999999999999999999998888877 33 44666677754 3456999999
Q ss_pred HHHHhcC
Q psy17727 254 FTIESGH 260 (261)
Q Consensus 254 ~~~e~~~ 260 (261)
+++|+++
T Consensus 231 ~~~e~~~ 237 (444)
T d1q5na_ 231 RIVEIAS 237 (444)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 12
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=4.9e-43 Score=327.45 Aligned_cols=214 Identities=19% Similarity=0.141 Sum_probs=178.8
Q ss_pred cccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH----HHHhhhhCCCceeccCCcc
Q psy17727 30 CFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLK----DIEYDIEHGKVELKVELED 105 (261)
Q Consensus 30 r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~----~i~~~~~~~~~~~~~~~~d 105 (261)
||+.+ ++...|++...++.+ +++.+|+++++++.|+||++.+++|.++++ .+.+. . ..++||
T Consensus 3 rY~~~--~~~~~fs~~~~~~~~-----~~ve~A~a~a~~~~g~ip~~~~~~I~~~~~~d~~~i~~~-e------~~t~hd 68 (429)
T d1c3ca_ 3 RYSLS--PMKDLWTEEAKYRRW-----LEVELAVTRAYEELGMIPKGVTERIRNNAKIDVELFKKI-E------EKTNHD 68 (429)
T ss_dssp GGCCT--THHHHTSHHHHHHHH-----HHHHHHHHHHHHHTTSSCTTHHHHHHHHCCCCHHHHHHH-H------HHHCCH
T ss_pred CCCcH--HHHHHcCHHHHHHHH-----HHHHHHHHHHHHHCCCCCHHHHHHHHhhCCCCHHHHHHH-H------HHhCCC
Confidence 67653 488889887766543 344456668899999999999999987742 12111 0 125789
Q ss_pred hhhhHHHHHHHHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccc
Q psy17727 106 IHMNIESELIRRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPI 185 (261)
Q Consensus 106 v~~~ie~~l~~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~ 185 (261)
|+ +++++|.+++|+.++|||+|+||||++||+++|++|+++..+.+.|..++++|.++|++|++|+|+||||+|+|+||
T Consensus 69 V~-a~v~~l~~~~g~~~~~vH~G~Ts~Di~~ta~~l~~~~~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTh~Q~A~P~ 147 (429)
T d1c3ca_ 69 VV-AFVEGIGSMIGEDSRFFHYGLTSSDVLDTANSLALVEAGKILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPT 147 (429)
T ss_dssp HH-HHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEE
T ss_pred cH-HHHHHHHHHcchhhccccCCCChHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhccCeeecchHhhcccCCc
Confidence 95 67889999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc--C-hHHHHhhcCCCCCCCCcccccchhhHHHHhcC
Q psy17727 186 SLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT--T-TNATAPELGLDSPRGDSLESIWRPGFTIESGH 260 (261)
Q Consensus 186 T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~--~-~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~ 260 (261)
|||+||++|+++|.|+++||.++.++++.+|+||++++|+++ + ....+..+|+.....+ +|+.+||+++++++
T Consensus 148 T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~~gga~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~rd~~~e~~~ 223 (429)
T d1c3ca_ 148 SFGLKVLGWYSEMKRNVQRLERAIEEVSYGKISGAVGNYANVPPEVEEKALSYLGLKPEPVS--TQVVPRDRHAFYLS 223 (429)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCTTSSCSSSCHHHHHHHHHHTTCEECSSC--SSSCCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccchhHHHHHHHhhcCCccccc--hHhhcchhHHHHHH
Confidence 999999999999999999999999999999999988877766 2 2445666666543332 59999999999864
No 13
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=100.00 E-value=6.9e-42 Score=317.19 Aligned_cols=218 Identities=20% Similarity=0.163 Sum_probs=174.1
Q ss_pred hhcccccchHHHHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhCCCceeccCCcc
Q psy17727 26 LWTGCFQQSMNEFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKELIVKTLKDIEYDIEHGKVELKVELED 105 (261)
Q Consensus 26 l~~~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~d 105 (261)
.+.+||+++ ++.+.|++.+.++.++ +|+ .|+++++.+.|+||++.+++|.+++.++.+- . . .-...+||
T Consensus 4 P~d~ry~~~--~~~~ifs~~~~~~~~l---~ve--~a~a~a~~e~G~ip~~~a~~i~~~~~d~~~i-~--~-~e~~~~hd 72 (402)
T d1dofa_ 4 PFDWRYGSE--EIRRLFTNEAIINAYL---EVE--RALVCALEELGVAERGCCEKVNKASVSADEV-Y--R-LERETGHD 72 (402)
T ss_dssp GGGTTSSCH--HHHTTSSHHHHHHHHH---HHH--HHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC------------CH
T ss_pred CCccccCCH--HHHHHcChHHHHHHHH---HHH--HHHHHHHHHcCCCCHHHHHHHHHhccCHHHH-H--H-HHHHhCCC
Confidence 467899764 5888899877665533 455 5556889999999999999987664221110 0 0 11236788
Q ss_pred hhhhHHHHHHHHhCccCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccc
Q psy17727 106 IHMNIESELIRRIGNVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPI 185 (261)
Q Consensus 106 v~~~ie~~l~~~~g~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~ 185 (261)
| ++++.+|.+.+| ++|||+|+|||||+||+++|++|+++..+.+.|..++++|.++|++|++|+||||||+|+|+||
T Consensus 73 v-~a~~~~l~~~~~--~~~vH~G~TsnDi~~ta~~l~~r~~~~~l~~~l~~l~~~L~~~a~~~~~t~m~grTH~Q~A~P~ 149 (402)
T d1dofa_ 73 I-LSLVLLLEQKSG--CRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPI 149 (402)
T ss_dssp H-HHHHHHHHHHHC--CSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEE
T ss_pred c-hHHHHHHhhhhH--HHHhhccCchHHhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHhhccccccc
Confidence 8 788999999887 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCc---Ch---HHHHhhcCCCCCCCCcccccchhhHHHHhc
Q psy17727 186 SLGHYLLAYASMFRRDIERLLDCRRRVNVNPLGSAALGAPHT---TT---NATAPELGLDSPRGDSLESIWRPGFTIESG 259 (261)
Q Consensus 186 T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~~Gt~~---~~---~~la~~LGl~~~~~n~~~~~~~rD~~~e~~ 259 (261)
|||+||++|+++|.|+++||..... +..+++||++++++++ ++ ..+++.||++.+. ..+|+++||++++++
T Consensus 150 T~G~~~~~~~~~l~r~~~rl~~~~~-~~~~~~gGa~g~~~~~~~~~~~~~~~l~~~lgl~~~~--~~~~~~~rd~~~e~~ 226 (402)
T d1dofa_ 150 TLGFKFANYYYELYIACRQLALAEE-FIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHV--ITTQVAPRESFAVLA 226 (402)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHH-HCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCS--SCSSSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccccccccchhhHHHHHHHHHhcccccc--hhhhhhhhhhhhHHH
Confidence 9999999999999999999987654 5678898887766665 22 5577888886443 335999999999986
Q ss_pred C
Q psy17727 260 H 260 (261)
Q Consensus 260 ~ 260 (261)
+
T Consensus 227 ~ 227 (402)
T d1dofa_ 227 S 227 (402)
T ss_dssp H
T ss_pred H
Confidence 4
No 14
>d1b9ma1 a.4.5.8 (A:-1-126) N-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=41.45 E-value=39 Score=23.00 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=38.4
Q ss_pred HhcCccccccccC----CccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy17727 167 LHKHHIMPGFTHF----QFAQPISLGHYLLAYASMFRRDIERLLDCRRRVNVNPLG 218 (261)
Q Consensus 167 ~~~~t~~~grTH~----Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lG 218 (261)
+.-+.+..=|+.+ ..+.+|..|.++..++..+....+++.+........|.|
T Consensus 58 ~~lg~~Lf~R~~~g~~~~~~~LT~~G~~ll~~a~~i~~~~~~~~~~l~~~~~~~~~ 113 (127)
T d1b9ma1 58 QLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLN 113 (127)
T ss_dssp HHHTSCCEEECCCC-----EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCTT
T ss_pred HHhCCeEEEeecCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 4456666666553 558999999999999999999999987766665555654
No 15
>d2nn4a1 a.272.1.1 (A:1-62) Hypothetical protein YqgQ {Bacillus subtilis [TaxId: 1423]}
Probab=35.20 E-value=41 Score=20.64 Aligned_cols=42 Identities=12% Similarity=0.194 Sum_probs=29.8
Q ss_pred HHHHhcccccchhhhccHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q psy17727 37 EFLQQFNESISVDEVLYREDIAGSIAHVTMLGERNIIDEQDKEL 80 (261)
Q Consensus 37 ~~~~~f~~~~~~~~~l~~~~i~~~lA~~~~l~~~Gii~~~~a~~ 80 (261)
..+..|..-+-+-.+++ +++-..-..+.+.+.|+|+++....
T Consensus 9 QLLK~fG~~IY~GdR~~--DielM~~El~~Ly~~~lid~~~y~~ 50 (62)
T d2nn4a1 9 QLLKTFGHIVYFGDREL--EIEFMLDELKELYMNHMIEKEQWAR 50 (62)
T ss_dssp HHHHTTTCCCCCSCHHH--HHHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHHCCEeEEeCchHH--HHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 36777776555545543 7777666778899999999986554
No 16
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=34.85 E-value=27 Score=21.65 Aligned_cols=39 Identities=18% Similarity=0.109 Sum_probs=26.8
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKAL 150 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l 150 (261)
+.|++.+| ..+..-|+-.|..|++...+.-...+....+
T Consensus 30 ~~Ia~~agvs~~~lY~~F~~K~~L~~~~~~~~~~~~~~~~ 69 (77)
T d2gfna1 30 RAVAEESGWSTGVLNHYFGSRHELLLAALRRAGDIQGDRY 69 (77)
T ss_dssp HHHHHHHSSCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHCcCHHHHHHHHHHHHHHHHHHHH
Confidence 57888888 5566667777999999887654444443333
No 17
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.53 E-value=51 Score=20.26 Aligned_cols=65 Identities=12% Similarity=0.084 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHHH
Q psy17727 76 QDKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIK 152 (261)
Q Consensus 76 ~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~ 152 (261)
+..+.|..+...+.....-..+ . + ..|++.+| ..+..-|+-.|..|++...+.-.+.+....+..
T Consensus 4 ~tre~Il~aa~~~~~~~G~~~~-------t----i-~~Ia~~agvs~~s~y~~F~~K~~l~~~~~~~~~~~~~~~~~~ 69 (79)
T d2fbqa1 4 ETVERILDAAEQLFAEKGFAET-------S----L-RLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEK 69 (79)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTC-------C----H-HHHHHHHTSCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccc-------c----H-HHHHHHHCcChhHHHHHCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677776666543221111 1 2 46788888 444444444599999876555444444333333
No 18
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=30.20 E-value=31 Score=21.00 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=26.6
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIK 152 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~ 152 (261)
+.|++.+| ..+..-|+-.|..|++...+.-...+....+.+
T Consensus 25 ~~Ia~~agvs~~~~y~~F~~K~~L~~~~~~~~~~~~~~~~~~ 66 (72)
T d1vi0a1 25 SKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEE 66 (72)
T ss_dssp HHHHHHHTSCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888888 445555556699999887765555444444433
No 19
>d2pxrc1 a.73.1.1 (C:1-145) HIV-1 capsid protein {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=29.53 E-value=15 Score=26.74 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=37.8
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCccccccHH
Q psy17727 125 LHTGRSRNDQVVLDLRLFTRRNIKALIKLLLDTVKQLTRLAQLHKHHIMPGFTHFQFAQPISLG 188 (261)
Q Consensus 125 iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~grTH~Q~A~P~T~G 188 (261)
+--|+|..|+..- ...+-.--.+..-+.+.+.+.|.++ .|+|-+++-|.--|
T Consensus 43 LSeg~tP~D~n~m------Ln~vgghqaamQilkd~InEeaaew------Dr~HP~~~gp~ppg 94 (145)
T d2pxrc1 43 LSEGATPQDLNTM------LNTVGGHQAAMQMLKETINEEAAEW------DRLHPVHAGPIAPG 94 (145)
T ss_dssp TCTTCCHHHHHHH------HHTTGGGTHHHHHHHHHHHHHHHHH------HHHSCCCSSCSSTT
T ss_pred HhCCCChHHHHHH------HHhccccHHHHHHHHHHHhHHHHHH------hccCCCCCCCCCCC
Confidence 5578899988742 2333344556667777888999998 49999999998666
No 20
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=28.88 E-value=54 Score=19.80 Aligned_cols=31 Identities=10% Similarity=-0.101 Sum_probs=22.0
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLF 142 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~ 142 (261)
+.|++++| ..+..-|+-.|.+|++...+.-.
T Consensus 27 ~~Ia~~agvs~~slY~yF~~k~~L~~~~~~~~ 58 (72)
T d1zk8a1 27 ASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYG 58 (72)
T ss_dssp HHHHHHHTSCHHHHTTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHCcCHHHHHHHHHHHH
Confidence 57899998 44555566669999888765543
No 21
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=27.53 E-value=43 Score=20.31 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHHHHhC-ccCCccccCCChhhHHHHHHHH
Q psy17727 77 DKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELIRRIG-NVGRKLHTGRSRNDQVVLDLRL 141 (261)
Q Consensus 77 ~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L 141 (261)
..+.|.++..++..+..-..+ . + +.|++.+| ..+..-|+-.|.+|++...+..
T Consensus 6 ~r~~il~aa~~l~~~~G~~~~-------s----i-~~Ia~~agvs~~~~y~~F~sK~~L~~~~~~~ 59 (71)
T d1ui5a1 6 TRATIIGAAADLFDRRGYEST-------T----L-SEIVAHAGVTKGALYFHFAAKEDLAHAILEI 59 (71)
T ss_dssp HHHHHHHHHHHHHHHHCTTTC-------C----H-HHHHHHHTCCHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccc-------C----H-HHHHHHHCcCHhHHHHHCcCHHHHHHHHHHH
Confidence 345677766665544222211 1 2 46888898 4455455556999999876543
No 22
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=26.54 E-value=49 Score=20.14 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHHHHhC-ccCC-ccccCCChhhHHHHHHHHHH
Q psy17727 75 EQDKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELIRRIG-NVGR-KLHTGRSRNDQVVLDLRLFT 143 (261)
Q Consensus 75 ~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~~~~g-~~g~-~iH~G~SsnDi~~Ta~~L~l 143 (261)
++..++|.++..++.....-..+ . + +.|++.+| ..+. |-|++ |..|++...+.-..
T Consensus 3 ~~~r~~Il~aa~~l~~~~G~~~~-------s----~-~~Ia~~agvs~~~iY~~F~-sK~~L~~~~~~~~~ 60 (74)
T d2g7sa1 3 QSKADDILQCARTLIIRGGYNSF-------S----Y-ADISQVVGIRNASIHHHFP-SKSDLVCKLVSQYR 60 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGC-------C----H-HHHHHHHCCCHHHHHHHCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccc-------C----H-HHHHHHHCcCcchHHHHCc-CHHHHHHHHHHHHH
Confidence 44566777777666543111111 1 2 57888888 4444 55565 99999987765433
No 23
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=26.43 E-value=75 Score=20.22 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=30.8
Q ss_pred HhcCccccccccCCccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17727 167 LHKHHIMPGFTHFQFAQPISLGHYLLAYASMFRRDIERLLDCRR 210 (261)
Q Consensus 167 ~~~~t~~~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 210 (261)
+.-+++..-|++ ..-.||..|..+..++..+....+++.+...
T Consensus 41 ~~lg~~Lf~R~~-~~~~lT~~G~~l~~~a~~il~~~~~~~~~~~ 83 (89)
T d1ixca1 41 ADLGVVLLERSH-RGIELTAAGHAFLEDARRILELAGRSGDRSR 83 (89)
T ss_dssp HHHTSCCBC------CCBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCceeeEecC-CccCccHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344777778886 5678999999999999999988887776554
No 24
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=25.08 E-value=40 Score=20.18 Aligned_cols=39 Identities=21% Similarity=0.422 Sum_probs=26.0
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKAL 150 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l 150 (261)
+.|++.+| ..+..-|+-.|..|++...+..++.+....+
T Consensus 25 ~~Ia~~agvs~~~iy~~F~sK~~L~~~~~~~~~~~~~~~~ 64 (69)
T d2np5a1 25 REVAKRAGVSIGAVQHHFSTKDEMFAFALRTLVDKLLARL 64 (69)
T ss_dssp HHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHCcCHHHHHHHHHHHHHHHHHHHH
Confidence 56888888 4444334445999999988766665554433
No 25
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=24.98 E-value=73 Score=19.59 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=27.7
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALI 151 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~ 151 (261)
..|++.+| ..+..-|+-.|..|++...+.-++.+.+..+.
T Consensus 35 ~~Ia~~agvs~~t~Y~~F~~K~~L~~~~~~~~~~~~~~~l~ 75 (81)
T d1rkta1 35 KDVVEESGFSRGGVYLYFSSTEEMFRRIIETGLDEGLRKLD 75 (81)
T ss_dssp HHHHHHHTSCHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 46888898 45566677789999998876655555444443
No 26
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=24.58 E-value=16 Score=22.39 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=28.8
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIKL 153 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~ 153 (261)
+.|++.+| ..|..-|+-.|.+|++...+..++.+....+.+.
T Consensus 24 ~~Ia~~agvs~~~~Y~~F~~K~~L~~~~~~~~~~~~~~~~~~a 66 (69)
T d2i10a1 24 TDLTKALGINPPSLYAAFGSKRDLFEKTLDRYMCERTLQLEEA 66 (69)
T ss_dssp HHHHHHHTCCHHHHHHHHCSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred HHHHHHhCCChhHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888 4455444456999999998877766555554443
No 27
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.79 E-value=74 Score=18.88 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=26.6
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALIK 152 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~ 152 (261)
+.|++.+| ..+..-|+-.|..|++...+.-++.+....+..
T Consensus 24 ~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~l~~ 65 (70)
T d2gena1 24 EMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEA 65 (70)
T ss_dssp HHHHHHHCCCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888898 445555566889999888665544444444433
No 28
>d1wmua_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Aldabra giant tortoise (Geochelone gigantea) [TaxId: 167804]}
Probab=21.40 E-value=84 Score=21.63 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhhhCCCceeccCCcchhhhHHHHHHHHhCccCCc-cccCCChhhHHHHHHHHHHHHHHHHH
Q psy17727 72 IIDEQDKELIVKTLKDIEYDIEHGKVELKVELEDIHMNIESELIRRIGNVGRK-LHTGRSRNDQVVLDLRLFTRRNIKAL 150 (261)
Q Consensus 72 ii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~~~~g~~g~~-iH~G~SsnDi~~Ta~~L~lr~~l~~l 150 (261)
+++.++...|.+....+..+... + + ..+-..|-+..++...+ -+++..+++.--.+....+-.++...
T Consensus 1 ~LT~~ek~lI~~sW~~l~~~~~~--~-----G----~~~~~rLF~~~P~~~~~F~~~~~~~~~~~~~~H~~~v~~~l~~~ 69 (141)
T d1wmua_ 1 MLTEDDKQLIQHVWEKVLEHQED--F-----G----AEALERMFIVYPSTKTYFPHFDLHHDSEQIRHHGKKVVGALGDA 69 (141)
T ss_dssp CCCHHHHHHHHHHHHHHGGGHHH--H-----H----HHHHHHHHHHSGGGGGGCTTSCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhHHH--H-----H----HHHHHHHHHhChHHHHhCchHhhccCcHHHHHHHHHHHHHHHHH
Confidence 36777777777777666543211 0 1 11112334444443332 24555555555556666677778888
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccc
Q psy17727 151 IKLLLDTVKQLTRLAQLHKHHIMPGFTH 178 (261)
Q Consensus 151 ~~~l~~l~~~L~~~A~~~~~t~~~grTH 178 (261)
++.++++...|..+++.|....-++..|
T Consensus 70 i~~ld~l~~~l~~L~~~H~~~~~v~~~~ 97 (141)
T d1wmua_ 70 VKHIDNLSATLSELSNLHAYNLRVDPVN 97 (141)
T ss_dssp HHTTTSHHHHTHHHHHHHHHTSCCCHHH
T ss_pred hcccccchHHHHHHHHHccccCCCCHHH
Confidence 8888888888888888885433333333
No 29
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.21 E-value=82 Score=18.79 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=21.4
Q ss_pred HHHHHHhC-ccCC-ccccCCChhhHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGR-KLHTGRSRNDQVVLDLRLFTR 144 (261)
Q Consensus 112 ~~l~~~~g-~~g~-~iH~G~SsnDi~~Ta~~L~lr 144 (261)
+.|++.+| ..+. |-|++ |..|++.....-++.
T Consensus 27 ~~Ia~~agvs~~t~Y~~F~-~K~~L~~~~~~~~~~ 60 (73)
T d1t56a1 27 DDLAKGAGISRPTFYFYFP-SKEAVLLTLLDRVVN 60 (73)
T ss_dssp HHHHHHHTCCHHHHHHHCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHCc-CHHHHHHHHHHHHHH
Confidence 57888888 4444 45555 999999876543333
No 30
>d1rxqa_ a.213.1.1 (A:) YfiT {Bacillus subtilis [TaxId: 1423]}
Probab=21.14 E-value=1.3e+02 Score=20.96 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=29.9
Q ss_pred cCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17727 178 HFQFAQPISLGHYLLAYASMFRRDIERLLDCRRRVN 213 (261)
Q Consensus 178 H~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~ 213 (261)
|.-...|+|....+..+..-..+|+..+..+++++.
T Consensus 137 ~~~~g~~~t~~~~l~~~~~H~~~H~~QI~~i~~~lG 172 (174)
T d1rxqa_ 137 HPDTKEIITLENALGLYVWHSHHHIAHITELSRRMG 172 (174)
T ss_dssp CTTTCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333445789999999999999999999999998763
No 31
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=20.91 E-value=47 Score=20.27 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=24.7
Q ss_pred HHHHHHhC-ccCCccccCCChhhHHHHHHHHHHHHHHHHHH
Q psy17727 112 SELIRRIG-NVGRKLHTGRSRNDQVVLDLRLFTRRNIKALI 151 (261)
Q Consensus 112 ~~l~~~~g-~~g~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~ 151 (261)
+.|++.+| ..+..-|+-.|..|++...+.-...+....+.
T Consensus 27 ~~Ia~~agvs~~~iY~~F~~k~~Ll~~~~~~~~~~~~~~~~ 67 (75)
T d2id6a1 27 DEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFE 67 (75)
T ss_dssp HHHHHHHTCCTHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888 44443344459999998876554444333333
Done!