BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17730
(101 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|387130799|ref|YP_006293689.1| argininosuccinate lyase [Methylophaga sp. JAM7]
gi|386272088|gb|AFJ03002.1| Argininosuccinate lyase [Methylophaga sp. JAM7]
Length = 478
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAIDNR 60
MPQKKNPD+P + S + LFN+LT + + ++KD QE K+P ID
Sbjct: 296 MPQKKNPDVPELIR--GKTSRVYGNLFNLLT--LMKNQPLAYNKDNQEDKEPLFDTIDTL 351
Query: 61 L 61
L
Sbjct: 352 L 352
>gi|387126061|ref|YP_006294666.1| argininosuccinate lyase [Methylophaga sp. JAM1]
gi|386273123|gb|AFI83021.1| Argininosuccinate lyase [Methylophaga sp. JAM1]
Length = 460
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAIDNR 60
MPQKKNPD+P L K S + LFN+LT + + ++KD QE K+P ID
Sbjct: 284 MPQKKNPDVPE-LVRGK-TSRVYGNLFNLLT--LMKNQPLAYNKDNQEDKEPLFDTIDTL 339
Query: 61 L 61
L
Sbjct: 340 L 340
>gi|335041663|ref|ZP_08534690.1| argininosuccinate lyase [Methylophaga aminisulfidivorans MP]
gi|333788277|gb|EGL54159.1| argininosuccinate lyase [Methylophaga aminisulfidivorans MP]
Length = 460
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAIDNR 60
MPQKKNPD+P + S + +FN+LT + + ++KD QE K+P ID
Sbjct: 284 MPQKKNPDVPELIR--GKTSRVYGNMFNLLT--LMKNQPLAYNKDNQEDKEPLFDTIDTL 339
Query: 61 L 61
L
Sbjct: 340 L 340
>gi|71909293|ref|YP_286880.1| argininosuccinate lyase [Dechloromonas aromatica RCB]
gi|109940245|sp|Q479S1.1|ARLY_DECAR RecName: Full=Argininosuccinate lyase; Short=ASAL; AltName:
Full=Arginosuccinase
gi|71848914|gb|AAZ48410.1| argininosuccinate lyase [Dechloromonas aromatica RCB]
Length = 462
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P L+ K Q L ++LT + S ++KD QE K+P A+D
Sbjct: 285 MPQKKNPDVPE-LARGKTGRVYGQ-LMSLLT--LMKSQPLAYNKDNQEDKEPLFDAVD 338
>gi|254490200|ref|ZP_05103390.1| argininosuccinate lyase [Methylophaga thiooxidans DMS010]
gi|224464547|gb|EEF80806.1| argininosuccinate lyase [Methylophaga thiooxydans DMS010]
Length = 459
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + S + +FN+LT + + ++KD QE K+P ID
Sbjct: 283 MPQKKNPDVPELIR--GKTSRVYGNMFNLLT--LMKNQPLAYNKDNQEDKEPLFDTID 336
>gi|94499846|ref|ZP_01306382.1| argininosuccinate lyase [Bermanella marisrubri]
gi|94428047|gb|EAT13021.1| argininosuccinate lyase [Oceanobacter sp. RED65]
Length = 463
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASS--VHDKDMQECKQPRATAID 58
MPQKKNPD+P L K R+F L + + S ++KD QE K+P ID
Sbjct: 284 MPQKKNPDVPE-LVRGKA-----GRIFGHLISLLTLMKSQPLAYNKDNQEDKEPLFDTID 337
Query: 59 N 59
N
Sbjct: 338 N 338
>gi|95928622|ref|ZP_01311369.1| argininosuccinate lyase [Desulfuromonas acetoxidans DSM 684]
gi|95135412|gb|EAT17064.1| argininosuccinate lyase [Desulfuromonas acetoxidans DSM 684]
Length = 462
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + + L ++LT + S ++KDMQE K+P +ID
Sbjct: 281 MPQKKNPDVPELVRGKTGR--VYGNLISLLT--LMKSLPLAYNKDMQEDKEPLFDSID 334
>gi|319942634|ref|ZP_08016942.1| argininosuccinate lyase [Sutterella wadsworthensis 3_1_45B]
gi|319803813|gb|EFW00745.1| argininosuccinate lyase [Sutterella wadsworthensis 3_1_45B]
Length = 474
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 1 MPQKKNPDIPRTLSEAKPESC-LRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P T A+ +S + L +MLT + ++KD QE K+P AID
Sbjct: 294 MPQKKNPDVPET---ARGKSGRVYGDLMSMLT--LMKGTPLAYNKDFQEDKEPVFDAID 347
>gi|83643197|ref|YP_431632.1| argininosuccinate lyase [Hahella chejuensis KCTC 2396]
gi|109940253|sp|Q2SQ67.1|ARLY_HAHCH RecName: Full=Argininosuccinate lyase; Short=ASAL; AltName:
Full=Arginosuccinase
gi|83631240|gb|ABC27207.1| argininosuccinate lyase [Hahella chejuensis KCTC 2396]
Length = 468
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 1 MPQKKNPDIPRTL--SEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + + L L M + P+ ++KD QE K+P AID
Sbjct: 286 MPQKKNPDVPELIRGKSGRVSGHLISLLMLMKSQPL------AYNKDNQEDKEPLFDAID 339
>gi|329898154|ref|ZP_08272353.1| Argininosuccinate lyase [gamma proteobacterium IMCC3088]
gi|328920886|gb|EGG28321.1| Argininosuccinate lyase [gamma proteobacterium IMCC3088]
Length = 467
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + + L +MLT + S ++KD QE K+P AID
Sbjct: 286 MPQKKNPDVPELVRGKTGRT--NGHLMSMLT--LMKSQPLAYNKDNQEDKEPLFDAID 339
>gi|378823535|ref|ZP_09846158.1| argininosuccinate lyase, partial [Sutterella parvirubra YIT 11816]
gi|378597659|gb|EHY30924.1| argininosuccinate lyase, partial [Sutterella parvirubra YIT 11816]
Length = 319
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 1 MPQKKNPDIPRTLSEAKPESC-LRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P T A+ +S + L MLT + ++KD QE K+P AID
Sbjct: 136 MPQKKNPDVPET---ARGKSGRVYGSLITMLT--LMKGTPLAYNKDFQEDKEPVFDAID 189
>gi|218778269|ref|YP_002429587.1| argininosuccinate lyase [Desulfatibacillum alkenivorans AK-01]
gi|226723698|sp|B8FH31.1|ARLY_DESAA RecName: Full=Argininosuccinate lyase; Short=ASAL; AltName:
Full=Arginosuccinase
gi|218759653|gb|ACL02119.1| Argininosuccinate lyase [Desulfatibacillum alkenivorans AK-01]
Length = 465
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 1 MPQKKNPDIPRTL--SEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + + L L M + PM +++DMQE K P A+D
Sbjct: 282 MPQKKNPDVPELVRGKTGRVVGSLMAILTTMKSLPM------AYNRDMQEDKPPLFDAVD 335
>gi|288940244|ref|YP_003442484.1| argininosuccinate lyase [Allochromatium vinosum DSM 180]
gi|288895616|gb|ADC61452.1| argininosuccinate lyase [Allochromatium vinosum DSM 180]
Length = 468
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASS--VHDKDMQECKQPRATAID 58
MPQKKNPD+P L K R+F L + + S ++KD QE K+P +D
Sbjct: 286 MPQKKNPDVPE-LVRGK-----SGRIFGHLMGLLTLMKSQPLAYNKDNQEDKEPLFDTVD 339
Query: 59 N 59
N
Sbjct: 340 N 340
>gi|313679662|ref|YP_004057401.1| argininosuccinate lyase [Oceanithermus profundus DSM 14977]
gi|313152377|gb|ADR36228.1| argininosuccinate lyase [Oceanithermus profundus DSM 14977]
Length = 468
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPDIP L AK + L +LT + + ++KD+QE K+P A+D
Sbjct: 287 MPQKKNPDIPE-LIRAKAGRAIGD-LVTLLTVVKGLPLA--YNKDLQEDKEPVFDAVD 340
>gi|407802629|ref|ZP_11149469.1| argininosuccinate lyase [Alcanivorax sp. W11-5]
gi|407023265|gb|EKE35012.1| argininosuccinate lyase [Alcanivorax sp. W11-5]
Length = 462
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAIDNR 60
MPQKKNPD+P + + L ++LT + S ++KD QE K+P A+D
Sbjct: 284 MPQKKNPDVPELVRGKTGR--VNGHLISLLT--LMKSQPLAYNKDNQEDKEPLFDAVDTL 339
Query: 61 L 61
L
Sbjct: 340 L 340
>gi|90023310|ref|YP_529137.1| argininosuccinate lyase [Saccharophagus degradans 2-40]
gi|109940282|sp|Q21EF4.1|ARLY_SACD2 RecName: Full=Argininosuccinate lyase; Short=ASAL; AltName:
Full=Arginosuccinase
gi|89952910|gb|ABD82925.1| argininosuccinate lyase [Saccharophagus degradans 2-40]
Length = 469
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAID 58
MPQKKNPD+P + + L ++LT + S ++KD QE K+P AID
Sbjct: 288 MPQKKNPDVPELVRGKTGR--VNGHLISLLT--LMKSQPLAYNKDNQEDKEPLFDAID 341
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.130 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,464,802,111
Number of Sequences: 23463169
Number of extensions: 43747810
Number of successful extensions: 86649
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 86636
Number of HSP's gapped (non-prelim): 17
length of query: 101
length of database: 8,064,228,071
effective HSP length: 70
effective length of query: 31
effective length of database: 6,421,806,241
effective search space: 199075993471
effective search space used: 199075993471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)