Query psy17730
Match_columns 101
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 29240
Date Fri Aug 16 21:31:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q5n_A 3-carboxy-CIS,CIS-mucon 91.1 0.037 1.3E-06 42.4 -0.2 42 1-49 283-324 (454)
2 3c8t_A Fumarate lyase; structu 90.8 0.049 1.7E-06 41.8 0.2 42 1-49 277-318 (451)
3 1dof_A Adenylosuccinate lyase; 90.1 0.046 1.6E-06 41.5 -0.4 42 1-49 265-306 (403)
4 2e9f_A Argininosuccinate lyase 89.0 0.065 2.2E-06 41.5 -0.4 44 1-51 283-329 (462)
5 2ptr_A Adenylosuccinate lyase; 87.8 0.097 3.3E-06 40.4 -0.1 46 1-52 298-343 (462)
6 1k7w_A Delta 2 crystallin; eye 86.1 0.075 2.6E-06 41.2 -1.6 13 1-13 286-298 (468)
7 1c3c_A Protein (adenylosuccina 85.4 0.15 5E-06 38.8 -0.3 42 1-49 264-305 (429)
8 2qga_B Adenylosuccinate lyase; 85.3 0.19 6.6E-06 38.8 0.4 44 1-50 298-341 (465)
9 2pfm_A Adenylosuccinate lyase; 84.4 0.17 5.9E-06 38.8 -0.3 42 1-49 276-317 (444)
10 3bhg_A Adenylosuccinate lyase; 83.9 0.2 6.7E-06 38.6 -0.1 46 1-52 301-346 (459)
11 1vdk_A Fumarase C, fumarate hy 83.4 0.2 6.9E-06 38.9 -0.3 11 1-11 321-331 (466)
12 1re5_A 3-carboxy-CIS,CIS-mucon 83.4 0.17 5.8E-06 38.7 -0.7 41 1-48 279-319 (450)
13 1jsw_A L-aspartase, L-aspartat 82.9 0.22 7.5E-06 38.8 -0.2 13 1-13 324-336 (478)
14 1yis_A Adenylosuccinate lyase; 82.8 0.18 6.3E-06 38.9 -0.7 13 1-13 288-300 (478)
15 1tj7_A Argininosuccinate lyase 82.1 0.22 7.4E-06 38.5 -0.5 13 1-13 280-292 (457)
16 2fel_A 3-carboxy-CIS,CIS-mucon 82.0 0.19 6.4E-06 37.8 -0.9 14 1-14 276-289 (359)
17 3r6q_A Aspartase; aspartate am 81.8 0.25 8.4E-06 38.8 -0.3 13 1-13 321-333 (468)
18 1fur_A Fumarase C, FUMC; hydro 81.7 0.25 8.7E-06 38.4 -0.3 12 1-12 321-332 (467)
19 4adm_A Fumarase C, fumarate hy 80.3 0.26 8.9E-06 39.2 -0.7 13 1-13 343-355 (495)
20 4eei_A Adenylosuccinate lyase; 80.0 0.27 9.1E-06 38.0 -0.7 42 1-49 265-306 (438)
21 1yfm_A Fumarase, YFUM; lyase, 79.9 0.31 1.1E-05 38.5 -0.3 11 1-11 346-356 (488)
22 3ocf_A Fumarate lyase:delta cr 78.4 0.34 1.2E-05 38.4 -0.5 13 1-13 341-353 (478)
23 2j91_A Adenylosuccinate lyase; 78.3 0.34 1.2E-05 38.0 -0.5 13 1-13 314-326 (503)
24 3gtd_A Fumarase C, fumarate hy 75.6 0.5 1.7E-05 37.8 -0.3 13 1-13 342-354 (482)
25 3e04_A Fumarase, fumarate hydr 74.1 0.53 1.8E-05 37.8 -0.5 13 1-13 348-360 (490)
26 4hgv_A Fumarase C, fumarate hy 71.9 0.6 2.1E-05 36.9 -0.7 13 1-13 353-365 (495)
27 1yg0_A COP associated protein; 65.6 2 6.7E-05 21.2 0.7 14 81-94 6-19 (66)
28 2qif_A Copper chaperone COPZ; 63.2 2 6.8E-05 20.8 0.4 14 81-94 7-20 (69)
29 3dxs_X Copper-transporting ATP 61.5 2.2 7.4E-05 22.6 0.4 14 81-94 7-20 (74)
30 2xmw_A PACS-N, cation-transpor 61.2 2.2 7.6E-05 21.3 0.4 14 81-94 8-21 (71)
31 2ldi_A Zinc-transporting ATPas 59.4 2.7 9.2E-05 20.7 0.6 14 81-94 8-21 (71)
32 2xmm_A SSR2857 protein, ATX1; 58.7 3 0.0001 20.4 0.7 14 81-94 6-19 (64)
33 4a4j_A Pacszia, cation-transpo 57.7 2.8 9.4E-05 21.8 0.4 14 81-94 7-20 (69)
34 1aw0_A Menkes copper-transport 56.7 2.7 9.3E-05 21.1 0.3 14 81-94 8-21 (72)
35 1cpz_A Protein (COPZ); copper 56.2 3 0.0001 20.6 0.4 14 81-94 5-18 (68)
36 2kt2_A Mercuric reductase; nme 55.5 3.2 0.00011 20.9 0.5 14 81-94 5-18 (69)
37 1y3j_A Copper-transporting ATP 55.3 3.5 0.00012 21.5 0.6 14 81-94 8-21 (77)
38 1osd_A MERP, hypothetical prot 55.3 3.8 0.00013 20.6 0.7 14 81-94 8-21 (72)
39 3fry_A Probable copper-exporti 55.2 3.8 0.00013 22.1 0.8 14 81-94 10-23 (73)
40 2l3m_A Copper-ION-binding prot 53.6 3.6 0.00012 20.7 0.4 14 81-94 10-23 (71)
41 1fvq_A Copper-transporting ATP 53.5 3.7 0.00013 20.6 0.5 14 81-94 7-20 (72)
42 1kvi_A Copper-transporting ATP 53.4 3.7 0.00013 21.4 0.5 14 81-94 13-26 (79)
43 1mwy_A ZNTA; open-faced beta-s 52.7 3.8 0.00013 21.1 0.5 14 81-94 8-21 (73)
44 1yjr_A Copper-transporting ATP 52.6 3.8 0.00013 20.7 0.5 14 81-94 9-22 (75)
45 2roe_A Heavy metal binding pro 52.3 3.8 0.00013 20.8 0.4 14 81-94 5-18 (66)
46 2kyz_A Heavy metal binding pro 50.8 5.6 0.00019 20.3 1.0 13 81-93 6-18 (67)
47 1opz_A Potential copper-transp 50.6 4.3 0.00015 20.3 0.5 14 81-94 11-24 (76)
48 3cjk_B Copper-transporting ATP 49.9 4.6 0.00016 20.7 0.5 14 81-94 7-20 (75)
49 1jww_A Potential copper-transp 49.3 4.6 0.00016 20.8 0.4 14 81-94 8-21 (80)
50 2b8i_A PAS factor; four helix 49.2 7.8 0.00027 25.8 1.7 23 13-35 16-40 (77)
51 2aj0_A Probable cadmium-transp 48.3 4.8 0.00017 20.7 0.4 14 81-94 8-21 (71)
52 3iwl_A Copper transport protei 44.5 6.3 0.00022 21.0 0.5 13 81-94 7-19 (68)
53 2kkh_A Putative heavy metal tr 37.4 9.5 0.00032 21.2 0.6 14 81-94 21-34 (95)
54 1q8l_A Copper-transporting ATP 34.1 8.2 0.00028 20.8 -0.1 14 81-94 14-27 (84)
55 3dkx_A Replication protein REP 33.9 13 0.00046 27.4 1.0 24 22-48 22-45 (210)
56 4egs_A Ribose 5-phosphate isom 33.3 20 0.0007 24.1 1.8 31 62-99 28-58 (180)
57 2k2p_A Uncharacterized protein 27.8 17 0.00057 20.7 0.5 14 81-94 27-40 (85)
58 2ew9_A Copper-transporting ATP 25.1 19 0.00065 20.7 0.4 14 81-94 85-98 (149)
59 1p6t_A Potential copper-transp 23.7 21 0.00071 20.8 0.4 14 81-94 79-92 (151)
60 1e7l_A GP49, recombination end 22.6 23 0.00078 25.2 0.5 15 79-93 50-64 (157)
61 2rop_A Copper-transporting ATP 21.6 26 0.0009 22.1 0.6 14 81-94 25-38 (202)
No 1
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=91.12 E-value=0.037 Score=42.38 Aligned_cols=42 Identities=19% Similarity=0.339 Sum_probs=20.3
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- +-.+++..+.--+ ....+-|.+|+|+-
T Consensus 283 MP~K~NP~~~E~i~~------~a~~v~g~~~~~~-~~~~~~~erd~~~~ 324 (454)
T 1q5n_A 283 MPHKRNPVAAASVLA------AANRVPALMSSIY-QSMVQEHERSLGAW 324 (454)
T ss_dssp ----CCCHHHHHHHH------HHHHHHHHHHHHH-HTTCCCTTSCSSHH
T ss_pred CCCCCCCHHHHHHHH------HHHHHHHHHHHHH-Hhccchhcccccch
Confidence 999999999865432 1112222211111 23567788998873
No 2
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=90.80 E-value=0.049 Score=41.82 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=19.7
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- +-.+++..+.--+ ....+-|.+|+|+-
T Consensus 277 MP~K~NP~~~E~i~~------~a~~v~g~~~~~~-~~~~~~~erd~~~~ 318 (451)
T 3c8t_A 277 MPQKQNPVSCELILA------GARIVRNHATSML-DAMIHDFERATGPW 318 (451)
T ss_dssp -----CCHHHHHHHH------HHHHHHHHHHHHH-HHTCCCTTCCHHHH
T ss_pred CCCCcCCHHHHHHHH------HHHHHHHHHHHHH-hcCchhhcccccch
Confidence 999999999865542 1122222221111 23567889999874
No 3
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=90.13 E-value=0.046 Score=41.50 Aligned_cols=42 Identities=19% Similarity=0.378 Sum_probs=21.2
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- -| .+++..+..-+. ...+-|.+|+|+-
T Consensus 265 MP~K~NP~~~E~i~~----~a--~~v~g~~~~~~~-~~~~~~erd~~~~ 306 (403)
T 1dof_A 265 MPHKANPTASERIVS----LA--RYVRALTHVAFE-NVALWHERDLTNS 306 (403)
T ss_dssp ----CCCHHHHHHHH----HH--HHHHHHHHHHHH-TTCCCTTCCGGGH
T ss_pred CCCCCCchHHHHHHH----HH--HHHHHHHHHHHH-cCcccccccccch
Confidence 999999999865432 11 122322222222 4567889999874
No 4
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=89.04 E-value=0.065 Score=41.47 Aligned_cols=44 Identities=34% Similarity=0.472 Sum_probs=23.7
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcc---cccccccccchhhhhcC
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPM---EISASSVHDKDMQECKQ 51 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpm---eisassvhdkdmqeckq 51 (101)
||||+||+++..+.-. | + +++..+..-+ + ...+.|.+|+|+-+.
T Consensus 283 MP~K~NP~~~E~i~~~----a-~-~v~g~~~~~~~~~~-~~p~~~~rDl~~~~~ 329 (462)
T 2e9f_A 283 MPQKKNPDILELIRAK----A-G-RVLGAFVGLSAVVK-GLPLAYNKDLQEDKE 329 (462)
T ss_dssp SSSCEECHHHHHHHHT----H-H-HHHHHHHHHHHHHT-TCCSSBCGGGGGGHH
T ss_pred CCCCcCCHHHHHHHHH----H-H-HHHHHHHHHHHHHh-CCchHhhhchhhhHh
Confidence 9999999987654321 1 1 1221111111 1 112579999998543
No 5
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=87.84 E-value=0.097 Score=40.40 Aligned_cols=46 Identities=22% Similarity=0.150 Sum_probs=25.4
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhhcCc
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQP 52 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqeckqp 52 (101)
||||+||+++..+.- ..++ ++..+..-+.-...+-|.+|+++-+.-
T Consensus 298 MP~K~NP~~~E~i~~-----~a~~-v~g~~~~~~~~~~~~~~erd~~~~~~~ 343 (462)
T 2ptr_A 298 MPHKVNPIDFENSEG-----NLGL-SNAVLQHLASKLPVSRWQRDLTDSTVL 343 (462)
T ss_dssp CTTCCCCHHHHHHHH-----HHHH-HHHHHHHHHHHTTCCSTTCCTHHHHHG
T ss_pred CCCCCCcHHHHHHHH-----HHHH-HHHHHHHHHHhhhhhcccccccccHHH
Confidence 999999998765421 1222 222222222222235688999986643
No 6
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=86.13 E-value=0.075 Score=41.20 Aligned_cols=13 Identities=62% Similarity=0.894 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 286 MP~K~NP~~~E~i 298 (468)
T 1k7w_A 286 MPQKKNPDSLELI 298 (468)
T ss_dssp EEEEEECHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 8999999987644
No 7
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=85.36 E-value=0.15 Score=38.81 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=23.7
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- -| .+++..+..-+. ...+-|.+|+++-
T Consensus 264 MP~K~NP~~~E~i~~----~a--~~v~g~~~~~~~-~~~~~~erd~~~~ 305 (429)
T 1c3c_A 264 MPHKKNPITCERLTG----LS--RMMRAYVDPSLE-NIALWHERDISHS 305 (429)
T ss_dssp CTTCCCCHHHHHHHH----HH--HHHHHTHHHHHH-TTCCSTTCCSHHH
T ss_pred CCCCCCcHHHHHHHH----HH--HHHHHHHHHHHh-cCCcccccccccc
Confidence 999999998765431 11 122222222122 3456788888873
No 8
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=85.30 E-value=0.19 Score=38.76 Aligned_cols=44 Identities=20% Similarity=0.161 Sum_probs=22.3
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhhc
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECK 50 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqeck 50 (101)
||||+||+..... +..++ ++.-++.+-++.-..+.|.+|+|+-+
T Consensus 298 MP~K~NP~~~e~~-----~g~~~-~~~~~~~~~~~~l~~~~~erdl~~s~ 341 (465)
T 2qga_B 298 MPHKVNPIDFENA-----EGNLH-IANAFFKLFSSKLPTSRLQRDLSDST 341 (465)
T ss_dssp CTTCCCCHHHHHH-----HHHHH-HHHHHHHHHHHHTTCCSTTBCTHHHH
T ss_pred CCCCCChHHHHHH-----HHHHH-HHHHHHHHHHHhhcchhhhhhhhhhh
Confidence 9999999952111 11111 11222222222223456889999874
No 9
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=84.36 E-value=0.17 Score=38.79 Aligned_cols=42 Identities=21% Similarity=0.385 Sum_probs=23.9
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- ..+ +++..+..-+. ...+-|.+|+++-
T Consensus 276 MP~K~NP~~~E~i~~-----~a~-~v~g~~~~~~~-~~~~~~erd~~~~ 317 (444)
T 2pfm_A 276 MPHKRNPIGSENMTG-----LAR-VIRGYMMTAYE-NVPLWHERDISHS 317 (444)
T ss_dssp CTTCCCCHHHHHHHH-----HHH-HHHHHHHHHHH-TSCCCTTCCSHHH
T ss_pred CCcccCCHHHHHHHH-----HHH-HHHHHHHHHHH-hCcccccccccch
Confidence 999999998765431 111 22222222222 3457788888873
No 10
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=83.93 E-value=0.2 Score=38.64 Aligned_cols=46 Identities=22% Similarity=0.178 Sum_probs=23.2
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhhcCc
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQP 52 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqeckqp 52 (101)
||||+||+....+ +..+ +++.-++.+-++--..+.|.+|+|+-+.-
T Consensus 301 MP~K~NP~~~e~~-----~g~~-~l~~~~~~~~~~~l~~~~~~rdl~~s~~~ 346 (459)
T 3bhg_A 301 MPHKVNPIDFENA-----EGNL-GLSNALFIHFANKLTQSRMQRDLSDSTVL 346 (459)
T ss_dssp SCCCCCTHHHHHH-----HHHH-HHHHHHHHHHHHHTTCCSTTCCTHHHHHH
T ss_pred CCCCcChHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHHhcccchhhhhh
Confidence 9999999952211 1111 12122222222222235688999987643
No 11
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=83.40 E-value=0.2 Score=38.88 Aligned_cols=11 Identities=45% Similarity=0.622 Sum_probs=10.2
Q ss_pred CCCCCCCCCcc
Q psy17730 1 MPQKKNPDIPR 11 (101)
Q Consensus 1 mpqkknpdipr 11 (101)
||||+||+++.
T Consensus 321 MP~K~NP~~~E 331 (466)
T 1vdk_A 321 MPGKVNPTQVE 331 (466)
T ss_dssp CTTCCCCHHHH
T ss_pred CCCCCCcHHHH
Confidence 99999999876
No 12
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=83.40 E-value=0.17 Score=38.68 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=19.5
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQE 48 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqe 48 (101)
||||+||+++..+.- -| .+++..+..-+ ....+-|.+|+++
T Consensus 279 MP~K~NP~~~E~i~~----~a--~~v~g~~~~~~-~~~~~~~erd~~~ 319 (450)
T 1re5_A 279 MPHKRNPVGAAVLIG----AA--TRVPGLLSTLF-AAMPQEHERSLGL 319 (450)
T ss_dssp ---CCCCHHHHHHHH----HH--HHHHHHHHHHH-HTCCCCTTBCSST
T ss_pred CCCCcCCHHHHHHHH----HH--HHHHHHHHHHH-HhChhhccccccc
Confidence 999999998765432 11 12222221111 2334578888876
No 13
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=82.94 E-value=0.22 Score=38.78 Aligned_cols=13 Identities=46% Similarity=0.887 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 324 MP~K~NP~~~E~i 336 (478)
T 1jsw_A 324 MPAKVNPVVPEVV 336 (478)
T ss_dssp CCCCCCCHHHHHH
T ss_pred CCcccCCHHHHHH
Confidence 9999999987544
No 14
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=82.83 E-value=0.18 Score=38.87 Aligned_cols=13 Identities=46% Similarity=0.565 Sum_probs=7.7
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 288 MP~K~NP~~~E~i 300 (478)
T 1yis_A 288 MPYKKNPMKSERC 300 (478)
T ss_dssp ---CCCCHHHHHH
T ss_pred CCcccCCHHHHHH
Confidence 9999999986543
No 15
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=82.11 E-value=0.22 Score=38.49 Aligned_cols=13 Identities=62% Similarity=0.920 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 280 MP~K~NP~~~E~i 292 (457)
T 1tj7_A 280 MPQKKNPDALELI 292 (457)
T ss_dssp CTTCCBCHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 9999999987644
No 16
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=81.99 E-value=0.19 Score=37.80 Aligned_cols=14 Identities=50% Similarity=0.707 Sum_probs=6.4
Q ss_pred CCCCCCCCCccccc
Q psy17730 1 MPQKKNPDIPRTLS 14 (101)
Q Consensus 1 mpqkknpdiprtls 14 (101)
||||+||+++.-+.
T Consensus 276 MP~K~NP~~~E~i~ 289 (359)
T 2fel_A 276 MPHKQNPVNAETLV 289 (359)
T ss_dssp -----CCHHHHHHH
T ss_pred CCcccCCHHHHHHH
Confidence 99999999875543
No 17
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=81.78 E-value=0.25 Score=38.80 Aligned_cols=13 Identities=46% Similarity=0.876 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 321 MP~K~NP~~~E~i 333 (468)
T 3r6q_A 321 MPGKVNPVMPEVM 333 (468)
T ss_dssp STTCCCCHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 9999999987544
No 18
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=81.73 E-value=0.25 Score=38.42 Aligned_cols=12 Identities=42% Similarity=0.551 Sum_probs=10.6
Q ss_pred CCCCCCCCCccc
Q psy17730 1 MPQKKNPDIPRT 12 (101)
Q Consensus 1 mpqkknpdiprt 12 (101)
||||+||+++..
T Consensus 321 MP~K~NP~~~E~ 332 (467)
T 1fur_A 321 MPGKVNPTQCEA 332 (467)
T ss_dssp CTTCCCCHHHHH
T ss_pred CCcccCCHHHHH
Confidence 999999998763
No 19
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=80.29 E-value=0.26 Score=39.22 Aligned_cols=13 Identities=46% Similarity=0.874 Sum_probs=8.1
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 343 MP~K~NPv~~E~i 355 (495)
T 4adm_A 343 MPGKVNPVLPEAV 355 (495)
T ss_dssp ---CCCCHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 9999999987544
No 20
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=80.02 E-value=0.27 Score=37.99 Aligned_cols=42 Identities=26% Similarity=0.447 Sum_probs=21.2
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHhhcCcccccccccccchhhhh
Q psy17730 1 MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQEC 49 (101)
Q Consensus 1 mpqkknpdiprtlseakpesclrqrlfnmlthpmeisassvhdkdmqec 49 (101)
||||+||+++..+.- +-.+++..+.--++ .....|.+|+|+.
T Consensus 265 MP~K~NP~~~E~i~~------~a~~v~g~~~~~~~-~~~~~~erdl~~~ 306 (438)
T 4eei_A 265 MPHKKNPISTENLTG------MARMLRSHVSIALE-NCVLWHERDISHS 306 (438)
T ss_dssp ---CCCCHHHHHHHH------HHHHHHHHHHHHHH-TTCCCTTCCSHHH
T ss_pred CCCCCCcHHHHHHHH------HHHHHHHHHHHHHh-ccchhcCccchhh
Confidence 999999998765542 11222222211121 3344688999886
No 21
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=79.92 E-value=0.31 Score=38.51 Aligned_cols=11 Identities=45% Similarity=0.649 Sum_probs=10.3
Q ss_pred CCCCCCCCCcc
Q psy17730 1 MPQKKNPDIPR 11 (101)
Q Consensus 1 mpqkknpdipr 11 (101)
||||+||+++.
T Consensus 346 MP~K~NPv~~E 356 (488)
T 1yfm_A 346 MPGKVNPTQNE 356 (488)
T ss_dssp STTCCCCHHHH
T ss_pred cccccCcHHHH
Confidence 99999999986
No 22
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=78.36 E-value=0.34 Score=38.37 Aligned_cols=13 Identities=54% Similarity=0.927 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 341 MP~K~NPv~~E~i 353 (478)
T 3ocf_A 341 MPGKVNPVIPESV 353 (478)
T ss_dssp BTTCCCCHHHHHH
T ss_pred CCcccCcHHHHHH
Confidence 9999999987544
No 23
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=78.34 E-value=0.34 Score=38.01 Aligned_cols=13 Identities=38% Similarity=0.544 Sum_probs=8.7
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 314 MP~K~NPv~~E~i 326 (503)
T 2j91_A 314 MPYKRNPMRSERC 326 (503)
T ss_dssp --CCCCCHHHHHH
T ss_pred CccccCcHHHHHH
Confidence 9999999986543
No 24
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=75.57 E-value=0.5 Score=37.75 Aligned_cols=13 Identities=46% Similarity=0.644 Sum_probs=11.0
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 342 MP~K~NPv~~E~i 354 (482)
T 3gtd_A 342 MPGKVNPTQVEAL 354 (482)
T ss_dssp STTCCCCHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 9999999987544
No 25
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=74.10 E-value=0.53 Score=37.76 Aligned_cols=13 Identities=38% Similarity=0.580 Sum_probs=9.1
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 348 MP~K~NPv~~E~i 360 (490)
T 3e04_A 348 MPGKVNPTQCEAM 360 (490)
T ss_dssp --CCCCCHHHHHH
T ss_pred CCCCCCcHHHHHH
Confidence 9999999987544
No 26
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=71.87 E-value=0.6 Score=36.94 Aligned_cols=13 Identities=46% Similarity=0.611 Sum_probs=8.2
Q ss_pred CCCCCCCCCcccc
Q psy17730 1 MPQKKNPDIPRTL 13 (101)
Q Consensus 1 mpqkknpdiprtl 13 (101)
||||+||+++..+
T Consensus 353 MP~K~NPv~~E~i 365 (495)
T 4hgv_A 353 MPGKVNPTQCEAL 365 (495)
T ss_dssp ---CCCCHHHHHH
T ss_pred CccccChHHHHHH
Confidence 9999999987654
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=65.57 E-value=2 Score=21.23 Aligned_cols=14 Identities=21% Similarity=0.800 Sum_probs=11.5
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 6 ~v~gm~C~~C~~~i 19 (66)
T 1yg0_A 6 QVPSITCNHCVDKI 19 (66)
T ss_dssp CCTTCSCSHHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 47899999998764
No 28
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=63.17 E-value=2 Score=20.84 Aligned_cols=14 Identities=29% Similarity=0.923 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 7 ~v~gm~C~~c~~~i 20 (69)
T 2qif_A 7 QVEGMSCQHCVKAV 20 (69)
T ss_dssp EEECCCSHHHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 46799999998753
No 29
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=61.50 E-value=2.2 Score=22.61 Aligned_cols=14 Identities=29% Similarity=0.978 Sum_probs=11.6
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|++.+
T Consensus 7 ~v~gm~C~~C~~~i 20 (74)
T 3dxs_X 7 GVTGMTCAACSNSV 20 (74)
T ss_dssp EEECCCSHHHHHHH
T ss_pred EECCcCCHHHHHHH
Confidence 47899999999764
No 30
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=61.21 E-value=2.2 Score=21.30 Aligned_cols=14 Identities=29% Similarity=1.009 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (71)
T 2xmw_A 8 QLEGMRCAACASSI 21 (71)
T ss_dssp EEECCCSHHHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 46899999998754
No 31
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=59.41 E-value=2.7 Score=20.65 Aligned_cols=14 Identities=36% Similarity=1.013 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (71)
T 2ldi_A 8 QVGGMRCAACASSI 21 (71)
T ss_dssp EEETCTTSGGGHHH
T ss_pred EECCccCHHHHHHH
Confidence 46799999998763
No 32
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=58.73 E-value=3 Score=20.37 Aligned_cols=14 Identities=36% Similarity=0.864 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 6 ~v~gm~C~~C~~~i 19 (64)
T 2xmm_A 6 TVPTIACEACAEAV 19 (64)
T ss_dssp ECTTCCSHHHHHHH
T ss_pred EECCcCcHHHHHHH
Confidence 46799999998753
No 33
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=57.70 E-value=2.8 Score=21.79 Aligned_cols=14 Identities=43% Similarity=1.087 Sum_probs=11.6
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 7 ~v~gm~C~~C~~~i 20 (69)
T 4a4j_A 7 QLEGMDCTSCASSI 20 (69)
T ss_dssp EEESCCSHHHHHHH
T ss_pred EECCeecHHHHHHH
Confidence 47899999998754
No 34
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=56.72 E-value=2.7 Score=21.14 Aligned_cols=14 Identities=29% Similarity=1.006 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (72)
T 1aw0_A 8 NIDGMTCNSCVQSI 21 (72)
T ss_dssp EEECCCHHHHHHHH
T ss_pred EECCeecHHHHHHH
Confidence 46899999998753
No 35
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=56.22 E-value=3 Score=20.61 Aligned_cols=14 Identities=43% Similarity=1.137 Sum_probs=11.1
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 5 ~v~gm~C~~C~~~i 18 (68)
T 1cpz_A 5 SVKGMSCNHCVARI 18 (68)
T ss_dssp EESCCCSSSHHHHH
T ss_pred EECCeeCHHHHHHH
Confidence 36799999998754
No 36
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=55.50 E-value=3.2 Score=20.87 Aligned_cols=14 Identities=43% Similarity=1.075 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 5 ~v~gm~C~~C~~~i 18 (69)
T 2kt2_A 5 KITGMTCDSCAAHV 18 (69)
T ss_dssp EEESSCSTHHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 46799999998754
No 37
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=55.31 E-value=3.5 Score=21.48 Aligned_cols=14 Identities=43% Similarity=1.080 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|++.+
T Consensus 8 ~v~gm~C~~C~~~i 21 (77)
T 1y3j_A 8 QVTGMTCASCVANI 21 (77)
T ss_dssp EESCGGGCSHHHHH
T ss_pred EECCeeCHHHHHHH
Confidence 46899999999764
No 38
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=55.28 E-value=3.8 Score=20.56 Aligned_cols=14 Identities=36% Similarity=0.987 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (72)
T 1osd_A 8 SVPGMTCSACPITV 21 (72)
T ss_dssp ECTTCCSTTHHHHH
T ss_pred EECCeEcHHHHHHH
Confidence 47899999999754
No 39
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=55.22 E-value=3.8 Score=22.06 Aligned_cols=14 Identities=36% Similarity=0.968 Sum_probs=11.5
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 10 ~v~gm~C~~C~~~i 23 (73)
T 3fry_A 10 ELSGLSCHHCVARV 23 (73)
T ss_dssp EEESSBCGGGHHHH
T ss_pred EECCCCCHHHHHHH
Confidence 47899999999754
No 40
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=53.64 E-value=3.6 Score=20.72 Aligned_cols=14 Identities=29% Similarity=0.923 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 10 ~v~gm~C~~C~~~i 23 (71)
T 2l3m_A 10 QVEGMSCGHCVNAI 23 (71)
T ss_dssp EEECCCSHHHHHHH
T ss_pred EECCccCHHHHHHH
Confidence 46799999998754
No 41
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=53.51 E-value=3.7 Score=20.59 Aligned_cols=14 Identities=29% Similarity=1.039 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 7 ~v~gm~C~~c~~~i 20 (72)
T 1fvq_A 7 AVHGMTCSACTNTI 20 (72)
T ss_dssp EECSCCSHHHHHHH
T ss_pred EECCeecHHHHHHH
Confidence 46799999998753
No 42
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=53.39 E-value=3.7 Score=21.41 Aligned_cols=14 Identities=43% Similarity=0.973 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 13 ~v~gm~C~~C~~~i 26 (79)
T 1kvi_A 13 SVEGMTCNSCVWTI 26 (79)
T ss_dssp EECCCCSTTTHHHH
T ss_pred EECCccCHHHHHHH
Confidence 46899999999753
No 43
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=52.75 E-value=3.8 Score=21.14 Aligned_cols=14 Identities=36% Similarity=0.997 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (73)
T 1mwy_A 8 KVSGMDCAACARKV 21 (73)
T ss_dssp EEESCCSTTHHHHH
T ss_pred EECCcCCHHHHHHH
Confidence 46799999999753
No 44
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=52.60 E-value=3.8 Score=20.70 Aligned_cols=14 Identities=43% Similarity=1.099 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 9 ~v~gm~C~~c~~~i 22 (75)
T 1yjr_A 9 VVRGMTCASCVHKI 22 (75)
T ss_dssp EEETCCTTTHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 36799999998764
No 45
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=52.30 E-value=3.8 Score=20.81 Aligned_cols=14 Identities=29% Similarity=0.914 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 5 ~v~gm~C~~C~~~i 18 (66)
T 2roe_A 5 KVEGMTCNHCVMAV 18 (66)
T ss_dssp EEECCCSHHHHHHH
T ss_pred EECCeEcHHHHHHH
Confidence 46899999998753
No 46
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=50.78 E-value=5.6 Score=20.31 Aligned_cols=13 Identities=23% Similarity=0.698 Sum_probs=10.8
Q ss_pred hhhcccchhhhhH
Q psy17730 81 SVRGLACTSCAAE 93 (101)
Q Consensus 81 svrglactscaae 93 (101)
.|.|+.|.+|+..
T Consensus 6 ~v~gm~C~~C~~~ 18 (67)
T 2kyz_A 6 YVPDISCNHCKMR 18 (67)
T ss_dssp ECGGGGSHHHHHH
T ss_pred EECCcCcHHHHHH
Confidence 4679999999875
No 47
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=50.63 E-value=4.3 Score=20.33 Aligned_cols=14 Identities=43% Similarity=1.096 Sum_probs=11.1
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 11 ~v~gm~C~~C~~~i 24 (76)
T 1opz_A 11 QVSGMTCAACAARI 24 (76)
T ss_dssp EEESCCSTTHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 46799999998753
No 48
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=49.92 E-value=4.6 Score=20.70 Aligned_cols=14 Identities=43% Similarity=0.973 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.+.|+.|.+|+..+
T Consensus 7 ~v~gm~C~~C~~~i 20 (75)
T 3cjk_B 7 SVEGMTCNSCVWTI 20 (75)
T ss_dssp EECCCCSHHHHHHH
T ss_pred EECCccCHHHHHHH
Confidence 46799999999764
No 49
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=49.31 E-value=4.6 Score=20.76 Aligned_cols=14 Identities=29% Similarity=1.047 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (80)
T 1jww_A 8 DIEGMTCAACANRI 21 (80)
T ss_dssp EEESCCCHHHHHHH
T ss_pred EECCccCHHHHHHH
Confidence 46899999998753
No 50
>2b8i_A PAS factor; four helix bundle, lipid binding protein; 1.80A {Vibrio vulnificus}
Probab=49.24 E-value=7.8 Score=25.76 Aligned_cols=23 Identities=35% Similarity=0.723 Sum_probs=20.1
Q ss_pred ccccCchhH--HHHHHHHhhcCccc
Q psy17730 13 LSEAKPESC--LRQRLFNMLTHPME 35 (101)
Q Consensus 13 lseakpesc--lrqrlfnmlthpme 35 (101)
|+.++||.| .||+||+-|.-|.|
T Consensus 16 La~~~PeqhA~iRQ~LYeqL~LpF~ 40 (77)
T 2b8i_A 16 LANQDPEQHATIRQNLYEQLDLPFD 40 (77)
T ss_dssp HHHSCGGGHHHHHHHHHHHHCCCHH
T ss_pred HHhcChHHHHHHHHHHHHHcCCcHH
Confidence 567899988 69999999998876
No 51
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=48.30 E-value=4.8 Score=20.70 Aligned_cols=14 Identities=57% Similarity=1.165 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 8 ~v~gm~C~~C~~~i 21 (71)
T 2aj0_A 8 RVDGLSCTNCAAKF 21 (71)
T ss_dssp EEESCCCHHHHHHH
T ss_pred EECCcccHHHHHHH
Confidence 46799999998764
No 52
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=44.53 E-value=6.3 Score=20.95 Aligned_cols=13 Identities=38% Similarity=0.912 Sum_probs=10.7
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.| |+.|.+|+..+
T Consensus 7 ~v-gm~C~~C~~~i 19 (68)
T 3iwl_A 7 SV-DMTCGGCAEAV 19 (68)
T ss_dssp EE-CCCSHHHHHHH
T ss_pred EE-CcCcHHHHHHH
Confidence 47 99999998754
No 53
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=37.42 E-value=9.5 Score=21.22 Aligned_cols=14 Identities=36% Similarity=0.603 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 21 ~v~gm~C~~C~~~i 34 (95)
T 2kkh_A 21 DVLGICCTSEVPII 34 (95)
T ss_dssp EETTCCTTTTHHHH
T ss_pred EECCcCCHHHHHHH
Confidence 36799999998753
No 54
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=34.15 E-value=8.2 Score=20.83 Aligned_cols=14 Identities=36% Similarity=1.028 Sum_probs=11.1
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 14 ~v~gm~C~~C~~~i 27 (84)
T 1q8l_A 14 KVEGMTCHSCTSTI 27 (84)
T ss_dssp EECCTTTCSSCHHH
T ss_pred EECCcccHHHHHHH
Confidence 36799999998753
No 55
>3dkx_A Replication protein REPB; replication initiation, plasmid replication, nuclease, hexamer, flexible nuclease domains, DNA replication; 2.70A {Streptococcus agalactiae} PDB: 3dky_A
Probab=33.94 E-value=13 Score=27.44 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=17.1
Q ss_pred HHHHHHHhhcCcccccccccccchhhh
Q psy17730 22 LRQRLFNMLTHPMEISASSVHDKDMQE 48 (101)
Q Consensus 22 lrqrlfnmlthpmeisassvhdkdmqe 48 (101)
.|.+|..+ | .++..|-+||||+.+
T Consensus 22 w~~~L~~~--~-~p~~~SplHDKDin~ 45 (210)
T 3dkx_A 22 WELKLETL--G-VPMAISPLHDKDKSS 45 (210)
T ss_dssp HHHHGGGG--C-CCEEECSCBCCCBCS
T ss_pred HHHHHHHc--C-CCeEecccccccCCc
Confidence 67788533 3 556668999999874
No 56
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=33.29 E-value=20 Score=24.11 Aligned_cols=31 Identities=35% Similarity=0.629 Sum_probs=21.3
Q ss_pred eeeccCceEEEeehHHHhhhhhcccchhhhhHHhhhcc
Q psy17730 62 HVMSRPSITIIYVQKQLCNSVRGLACTSCAAELWFKHS 99 (101)
Q Consensus 62 hvmsrpsitiiyvqkqlcnsvrglactscaaelwfkhs 99 (101)
--|++.++.|++| | .|-.|-|=.||-+|++-
T Consensus 28 ~~m~~~~mkVLFV----C---~GNiCRSpmAE~l~r~~ 58 (180)
T 4egs_A 28 QQMGRGSMRVLFV----C---TGNTCRSPMAEGIFNAK 58 (180)
T ss_dssp ------CCEEEEE----E---SSSSSHHHHHHHHHHHH
T ss_pred CcCCCCCeEEEEE----e---CCCcccCHHHHHHHHHH
Confidence 3588889999998 4 48889999999999863
No 57
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=27.79 E-value=17 Score=20.66 Aligned_cols=14 Identities=29% Similarity=0.776 Sum_probs=11.2
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 27 ~V~Gm~C~~C~~~I 40 (85)
T 2k2p_A 27 HVEDMTCGHCAGVI 40 (85)
T ss_dssp ECTTCCHHHHHHHH
T ss_pred EECCCCCHHHHHHH
Confidence 47899999998753
No 58
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=25.10 E-value=19 Score=20.70 Aligned_cols=14 Identities=29% Similarity=1.028 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 85 ~v~gm~C~~C~~~i 98 (149)
T 2ew9_A 85 TITGMTCASCVHNI 98 (149)
T ss_dssp EEESCCSHHHHHHH
T ss_pred EEEeccCHHHHHHH
Confidence 47899999998753
No 59
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=23.68 E-value=21 Score=20.77 Aligned_cols=14 Identities=29% Similarity=1.047 Sum_probs=11.3
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|+..+
T Consensus 79 ~v~gm~C~~C~~~i 92 (151)
T 1p6t_A 79 DIEGMTCAACANRI 92 (151)
T ss_dssp EESSCCSSSHHHHH
T ss_pred EecCCCCHHHHHHH
Confidence 47899999998753
No 60
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=22.57 E-value=23 Score=25.24 Aligned_cols=15 Identities=47% Similarity=0.933 Sum_probs=12.4
Q ss_pred hhhhhcccchhhhhH
Q psy17730 79 CNSVRGLACTSCAAE 93 (101)
Q Consensus 79 cnsvrglactscaae 93 (101)
...|||+.|.+|-.-
T Consensus 50 tG~VRGlLC~~CN~~ 64 (157)
T 1e7l_A 50 AGKVRGLLCNLCDAA 64 (157)
T ss_dssp TTBEEEEECHHHHHH
T ss_pred CCcchhhccHhHhch
Confidence 358999999999764
No 61
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=21.56 E-value=26 Score=22.07 Aligned_cols=14 Identities=29% Similarity=0.930 Sum_probs=11.4
Q ss_pred hhhcccchhhhhHH
Q psy17730 81 SVRGLACTSCAAEL 94 (101)
Q Consensus 81 svrglactscaael 94 (101)
.|.|+.|.+|++.+
T Consensus 25 ~v~Gm~C~~C~~~i 38 (202)
T 2rop_A 25 RIDGMHCKSCVLNI 38 (202)
T ss_dssp EEESGGGSTHHHHH
T ss_pred EECCeEcHHHHHHH
Confidence 47899999998753
Done!