RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17730
         (101 letters)



>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase
           {Bacillus stearothermophilus, maltogenic alpha-amylase
           [TaxId: 1422]}
          Length = 407

 Score = 23.5 bits (49), Expect = 7.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 6   NPDIPRTLSEAKPESCLRQRLFNMLTHP 33
           N D+ R LS    ++ L Q L  +LT  
Sbjct: 327 NHDMSRFLSVNSNKANLHQALAFILTSR 354


>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima
           [TaxId: 2336]}
          Length = 429

 Score = 23.3 bits (49), Expect = 8.7
 Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 7/86 (8%)

Query: 1   MPQKKNPDIPRTLSEAKPESCLRQRLFNMLTHPMEISASSVHDKDMQECKQPRATAIDNR 60
           MP KKNP     L      + L + +   +   +E + +  H++D+      R    D  
Sbjct: 264 MPHKKNPITCERL------TGLSRMMRAYVDPSLE-NIALWHERDISHSSVERYVFPDAT 316

Query: 61  LHVMSRPSITIIYVQKQLCNSVRGLA 86
             +          V+    N  R   
Sbjct: 317 QTLYYMIVTATNVVRNMKVNEERMKK 342


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.130    0.397 

Gapped
Lambda     K      H
   0.267   0.0403    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 348,571
Number of extensions: 12569
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 3
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)