BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17732
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35554|FTN_DROME Flightin OS=Drosophila melanogaster GN=fln PE=2 SV=1
Length = 182
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 73 KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRT 132
K + + HWVRP LQY+Y Y+Y NYYDDVI Y++ K Q G E+PRPQTWAER LRT
Sbjct: 77 KPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIPRPQTWAERVLRT 135
Query: 133 YTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
D +Y K D++L+Q L S + Y H+K + N++Y VL
Sbjct: 136 RNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182
>sp|P35416|MYSP2_DROME Paramyosin, short form OS=Drosophila melanogaster GN=Prm PE=2 SV=2
Length = 640
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 83 RPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQT--WAERALRTY 133
RPT Y NY Y N+Y ++ YL++K++G E+ +P +ER L+ Y
Sbjct: 13 RPTTTTYEDNYGYTMNFYQPMLDYLDAKAKG---LEVKKPHLPWVSERGLKQY 62
>sp|Q7N8Q7|QUEF_PHOLL NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=queF PE=3
SV=1
Length = 282
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 9/135 (6%)
Query: 46 EETQARDIGAQKDSEIQ-ALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVI 104
EET RD+ A + E++ ALH + + F + + D YD
Sbjct: 112 EETLQRDLAACAEGEVEVALHHLDHFNNQPISTFTG-------ECIDDQDIEVTEYDFNR 164
Query: 105 HYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTAT-YEKTKADEELLQKLRFSGKFY 163
HYL + +QG V E+ L T+ DW Y+ +K + E L + S + +
Sbjct: 165 HYLQNAAQGPQVEEVLVSHLLKSNCLITHQPDWGSVQIHYKGSKINREALLRYLISFRHH 224
Query: 164 AQHSKEFYNRKYRDV 178
+ ++ R + D+
Sbjct: 225 NEFHEQCVERIFSDL 239
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1
Length = 741
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 5 WADDGGFSWDDVEA-IEEPKAQRSLPPKQLRVLA----GAPAEKKPEETQARDIGAQKDS 59
W +G +D++ A I+E KA + P ++V G+P + +GA+
Sbjct: 292 WVKNGNTGYDEIRAAIKEAKAVKD-KPTMIKVTTTIGFGSPNKANSYSVHGSGLGAK--- 347
Query: 60 EIQA-----------LHFPKKRDIKKTREFHHWVRPT----RLQYRYNYDYAHNYYDDVI 104
E++A H P+ D+K HW R T L+ +N +A Y+
Sbjct: 348 EVEATRNNLGWPYEPFHVPE--DVKS-----HWSRHTPEGAALETEWNAKFAE--YEK-- 396
Query: 105 HYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKL 156
Y + + P W E+AL TYT + P AT ++ + L K+
Sbjct: 397 KYAEEAADLKSIITGELPAGW-EKALPTYTPESPADATRNLSQQNLNALAKV 447
>sp|P98072|ENTK_BOVIN Enteropeptidase OS=Bos taurus GN=TMPRSS15 PE=1 SV=1
Length = 1035
Score = 31.2 bits (69), Expect = 4.4, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 62 QALHFPKKRDIKKTREFHHWVRPTR--LQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTEL 119
+ALH+PK + T W+ L + N+DY + YY DV++ +G +++
Sbjct: 254 EALHYPKPSN--NTSAVCRWIIRVNQGLSIQLNFDYFNTYYADVLNIY----EGMGSSKI 307
Query: 120 PRPQTWAERA--LRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYN 172
R W+ +R ++ TAT+ ++DE + F + A +SKE N
Sbjct: 308 LRASLWSNNPGIIRIFSNQV--TATF-LIQSDES--DYIGFKVTYTAFNSKELNN 357
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1
Length = 741
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 5 WADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLA----GAPAEKKPEETQARDIGAQK-DS 59
W +G +D++ A + + P ++V G+P + +G+++ ++
Sbjct: 292 WVKNGNTGYDEIRAAIKEAKTVTDKPTLIKVTTTIGFGSPNKSNSYSVHGSALGSKEVEA 351
Query: 60 EIQALHFPKK-----RDIKKTREFHHWVRPT----RLQYRYNYDYAHNYYDDVIHYLNSK 110
Q L +P + ++KK HW R T L+ +N +A Y+ Y
Sbjct: 352 TRQNLGWPYEPFHVPEEVKK-----HWSRHTPEGASLEAEWNTKFAE--YEK--KYPEDA 402
Query: 111 SQGGHVTELPRPQTWAERALRTYTKDWPDTAT 142
++ +T P W E+AL TYT + P AT
Sbjct: 403 TEFKSITTGEFPAGW-EKALPTYTPETPGDAT 433
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,632,332
Number of Sequences: 539616
Number of extensions: 3394417
Number of successful extensions: 8658
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 8653
Number of HSP's gapped (non-prelim): 36
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)