BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy17732
MIRKWADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKDSE
IQALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELP
RPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLY
AYITHW

High Scoring Gene Products

Symbol, full name Information P value
fln
flightin 		protein from Drosophila melanogaster 1.6e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17732
        (186 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0005633 - symbol:fln "flightin" species:7227 "Dros...   214  1.6e-17   1


>FB|FBgn0005633 [details] [associations]
            symbol:fln "flightin" species:7227 "Drosophila melanogaster"
            [GO:0031672 "A band" evidence=IDA] [GO:0005863 "striated muscle
            myosin thick filament" evidence=IDA] [GO:0030241 "skeletal muscle
            myosin thick filament assembly" evidence=IMP] [GO:0043292
            "contractile fiber" evidence=NAS] [GO:0071688 "striated muscle
            myosin thick filament assembly" evidence=IDA] [GO:0007527 "adult
            somatic muscle development" evidence=IMP] [GO:0045214 "sarcomere
            organization" evidence=IMP] [GO:0014703 "oscillatory muscle
            contraction" evidence=IMP] EMBL:AE014296 GO:GO:0007527
            GO:GO:0045214 GO:GO:0030241 GO:GO:0031672 ChiTaRS:cher EMBL:Z18858
            EMBL:AY060802 PIR:A46436 RefSeq:NP_524174.1 UniGene:Dm.2517
            STRING:P35554 PaxDb:P35554 PRIDE:P35554 EnsemblMetazoa:FBtr0074910
            EnsemblMetazoa:FBtr0332723 GeneID:40185 KEGG:dme:Dmel_CG7445
            UCSC:CG7445-RA CTD:40185 FlyBase:FBgn0005633 eggNOG:NOG41341
            InParanoid:P35554 OMA:ASIRTYN OrthoDB:EOG4K3JCT PhylomeDB:P35554
            GenomeRNAi:40185 NextBio:817458 Bgee:P35554 GermOnline:CG7445
            GO:GO:0005863 GO:GO:0014703 Uniprot:P35554
        Length = 182

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 60/179 (33%), Positives = 85/179 (47%)

Query:     5 WA-DDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKD-SEIQ 62
             W  DDGG   ++ +A        + P K   V +   A+     T A +  A ++  EI+
Sbjct:     8 WGFDDGG---EEEKAASTQAGTPAPPSKAPSVASDHKADSVVAGTPANEEAAPEEVEEIK 64

Query:    63 ALHFPKKRD--IKKTREFHHWVRPTRLQXXXXXXXXXXXXXXVIHYLNSKSQGGHVTELP 120
             A   P + D   K  + + HWVRP  LQ              VI Y++ K Q G   E+P
Sbjct:    65 APPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIP 123

Query:   121 RPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
             RPQTWAER LRT      D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct:   124 RPQTWAERVLRTRNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       172   0.00093  108 3  11 22  0.43    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  18.22u 0.07s 18.29t   Elapsed:  00:00:18
  Total cpu time:  18.22u 0.07s 18.29t   Elapsed:  00:00:19
  Start:  Thu Aug 15 11:31:33 2013   End:  Thu Aug 15 11:31:52 2013

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