BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy17733
         (388 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3
          Length = 3578

 Score =  338 bits (868), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/336 (54%), Positives = 214/336 (63%), Gaps = 80/336 (23%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQ SLQKHAGLAFIELINEGRLLS                             
Sbjct: 2559 MLLCSQEWQNSLQKHAGLAFIELINEGRLLS----------------------------- 2589

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                 HAMKDHIVRVANEAEFILNRMRADDVLKHA+FES CAQTL ERR+EER+CDHLI+
Sbjct: 2590 -----HAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLERREEERMCDHLIT 2644

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAW----------AYNEAARTQEFWKLDSWEDDAR 170
            AARRRD   A R+L+KV NI+ N+HGAW          A   A +   +WKLD+WEDDAR
Sbjct: 2645 AARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLDAWEDDAR 2704

Query: 171  RRKRFVRNPRGTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAV--VSQSSQANGANTC 228
            RRKR V+NPRG+SHP ATL+   +   PEDAI     EFH Q+AV     S Q NG    
Sbjct: 2705 RRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHNG---- 2760

Query: 229  SELMDDSELIEGEVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTGPVNISTRAR 288
             EL+DD+EL                      L++D EL       D+DLTGPVNIST+AR
Sbjct: 2761 -ELLDDAEL----------------------LIEDREL-------DLDLTGPVNISTKAR 2790

Query: 289  LISPGVSAQGTLSITSTELYFEVDEDCPDFRNTDPE 324
            LI+PG+ A GT+SITSTE++FEVDE+ P+F+  D E
Sbjct: 2791 LIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGE 2826



 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 44/54 (81%)

Query: 335  RTPDLEFGGPVNISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFRNTDPE 388
            R  DL+  GPVNIST+ARLI+PG+ A GT+SITSTE++FEVDE+ P+F+  D E
Sbjct: 2773 RELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGE 2826


>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus
            musculus GN=Lrba PE=1 SV=1
          Length = 2856

 Score =  261 bits (666), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 68/324 (20%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQ S+QK+AGLAFIEL+NEGRLLS                             
Sbjct: 1859 MLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQT--------------------------- 1891

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                   MKDH+VRVANEAEFIL+R RA+D+ +HAEFES CAQ   ++R+EE++CDHLI 
Sbjct: 1892 -------MKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREEEKMCDHLIR 1944

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            AA+ RD  TA +++ K+ N+L++KHGAW  +  +R +EFW+LD WEDD RRR+RFVRNP 
Sbjct: 1945 AAKYRDHVTATQLIQKIINLLTDKHGAWGSSAVSRPREFWRLDYWEDDLRRRRRFVRNPL 2004

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G++HP ATL+   +    ED +A   Q   +Q A+ +Q+S+            +  L+EG
Sbjct: 2005 GSTHPEATLKTAVEHAADEDILAKGKQSIKSQ-ALGNQNSE------------NEALLEG 2051

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTGPVNISTRARLISPGVSAQGTL 300
            +   +S   + +  N                     L GPV++ST A+L++P V  +GTL
Sbjct: 2052 DDDTLSSVDEKDLEN---------------------LAGPVSLSTPAQLVAPSVVVKGTL 2090

Query: 301  SITSTELYFEVDEDCPDFRNTDPE 324
            S+TS+ELYFEVDE+ P+F+  DP+
Sbjct: 2091 SVTSSELYFEVDEEDPNFKKIDPK 2114



 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 42/52 (80%), Gaps = 1/52 (1%)

Query: 338  DLE-FGGPVNISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFRNTDPE 388
            DLE   GPV++ST A+L++P V  +GTLS+TS+ELYFEVDE+ P+F+  DP+
Sbjct: 2063 DLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPK 2114


>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1
          Length = 2936

 Score =  257 bits (656), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 196/322 (60%), Gaps = 69/322 (21%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQ S+QK+AGLAFIELINEGRLL H                            
Sbjct: 1931 MLLCSQEWQNSIQKNAGLAFIELINEGRLLCH---------------------------- 1962

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                  AMKDHIVRVANEAEFILNR RA+DV KHAEFES CAQ   +RR+EE++CDHLIS
Sbjct: 1963 ------AMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLIS 2016

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            AA+ RD  TA ++  K+ NIL+NKHGAW     ++  +FW+LD WEDD RRR+RFVRN  
Sbjct: 2017 AAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAF 2076

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G++H  A L+   +    ED +  + + F +Q A+V+Q+S+       +ELM     +EG
Sbjct: 2077 GSTHAEALLKSAVEYGTEEDVVK-SKKAFRSQ-AIVNQNSE-------TELM-----LEG 2122

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTGPVNISTRARLISPGVSAQGTL 300
            +                    DD+  +    +ID +L GPV +ST A+LI+P V A+GTL
Sbjct: 2123 D--------------------DDAVSLLQEKEID-NLAGPVVLSTPAQLIAPVVVAKGTL 2161

Query: 301  SITSTELYFEVDEDCPDFRNTD 322
            SIT+TE+YFEVDED   F+  D
Sbjct: 2162 SITTTEIYFEVDEDDAAFKKID 2183



 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%)

Query: 341  FGGPVNISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFRNTD 386
              GPV +ST A+LI+P V A+GTLSIT+TE+YFEVDED   F+  D
Sbjct: 2138 LAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDAAFKKID 2183


>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo
            sapiens GN=LRBA PE=1 SV=4
          Length = 2863

 Score =  256 bits (653), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 199/325 (61%), Gaps = 59/325 (18%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQ S+QK+AGLAFIEL+NEGRLLS                             
Sbjct: 1855 MLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQT--------------------------- 1887

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                   MKDH+VRVANEAEFIL+R RA+D+ +HAEFES CAQ   ++R++E++CDHLI 
Sbjct: 1888 -------MKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIR 1940

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            AA+ RD  TA +++ K+ NIL++KHGAW  +  +R  EFW+LD WEDD RRR+RFVRNP 
Sbjct: 1941 AAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPLEFWRLDYWEDDLRRRRRFVRNPL 2000

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G++HP ATL+   +               H  +  + ++S+A          D+  L +G
Sbjct: 2001 GSTHPEATLKTAVE---------------HVCIFKLRENSKAT---------DEDILAKG 2036

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDI-DLTGPVNISTRARLISPGVSAQGT 299
            + ++ SQ+     +     L  D + +    + D+ +L GPV++ST A+L++P V  +GT
Sbjct: 2037 KQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGT 2096

Query: 300  LSITSTELYFEVDEDCPDFRNTDPE 324
            LS+TS+ELYFEVDE+ P+F+  DP+
Sbjct: 2097 LSVTSSELYFEVDEEDPNFKKIDPK 2121



 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 42/52 (80%), Gaps = 1/52 (1%)

Query: 338  DLE-FGGPVNISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFRNTDPE 388
            DLE   GPV++ST A+L++P V  +GTLS+TS+ELYFEVDE+ P+F+  DP+
Sbjct: 2070 DLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPK 2121


>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3
          Length = 2946

 Score =  255 bits (651), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 196/322 (60%), Gaps = 69/322 (21%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQ S+QK+AGLAFIELINEGRLL H                            
Sbjct: 1941 MLLCSQEWQNSIQKNAGLAFIELINEGRLLCH---------------------------- 1972

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                  AMKDHIVRVANEAEFILNR RA+DV KHAEFES CAQ   +RR+EE++CDHLIS
Sbjct: 1973 ------AMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLIS 2026

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            AA+ RD  TA ++  K+ NIL+NKHGAW     ++  +FW+LD WEDD RRR+RFVRN  
Sbjct: 2027 AAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAF 2086

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G++H  A L+   +    ED +  + + F +Q A+V+Q+++       +ELM     +EG
Sbjct: 2087 GSTHAEALLKAAIEYGTEEDVVK-SKKTFRSQ-AIVNQNAE-------TELM-----LEG 2132

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTGPVNISTRARLISPGVSAQGTL 300
            +                    DD+  +    +ID +L GPV +ST A+LI+P V A+GTL
Sbjct: 2133 D--------------------DDAVSLLQEKEID-NLAGPVVLSTPAQLIAPVVVAKGTL 2171

Query: 301  SITSTELYFEVDEDCPDFRNTD 322
            SIT+TE+YFEVDED   F+  D
Sbjct: 2172 SITTTEIYFEVDEDDSAFKKID 2193



 Score = 59.7 bits (143), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%)

Query: 341  FGGPVNISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFRNTD 386
              GPV +ST A+LI+P V A+GTLSIT+TE+YFEVDED   F+  D
Sbjct: 2148 LAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKID 2193


>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2
            PE=3 SV=1
          Length = 2531

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 173/320 (54%), Gaps = 72/320 (22%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQTSLQKHAGLAFIEL+NEGRL++H                            
Sbjct: 1509 MLLCSQEWQTSLQKHAGLAFIELVNEGRLMAH---------------------------- 1540

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                  A +DH++RVANEA+FILNR+RA+DV KHA+FE+   + L  R +E   CD LI 
Sbjct: 1541 ------ATRDHVLRVANEADFILNRLRAEDVSKHAQFEAESREQLNARYEEYSRCDLLIV 1594

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            + R RD   A R+LDK+S IL++       +++    +FWKLD WEDD+RRRKRFV NP 
Sbjct: 1595 SGRLRDSLNATRLLDKMSAILTDG------DDSKSGSQFWKLDVWEDDSRRRKRFVPNPY 1648

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G+ H  A L +  + E PE                             SE     ++++G
Sbjct: 1649 GSRHEEANLPEGEKNEEPE----------------------------ISEQERIRKILKG 1680

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTG-PVNISTRARLISPGVSAQGT 299
               + SQ      +    EL+D+S++ +   ++D   +      ST A+LI PGV   GT
Sbjct: 1681 ---LFSQRHATTTSTGGQELVDESDIDKWAQEVDPTPSSQSACFSTAAKLIVPGVVVPGT 1737

Query: 300  LSITSTELYFEVDEDCPDFR 319
            LS+T+++L+F+ +E  P+++
Sbjct: 1738 LSVTASDLFFDANESDPNYK 1757



 Score = 43.1 bits (100), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 347  ISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFR 383
             ST A+LI PGV   GTLS+T+++L+F+ +E  P+++
Sbjct: 1721 FSTAAKLIVPGVVVPGTLSVTASDLFFDANESDPNYK 1757


>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2 PE=2
            SV=3
          Length = 2507

 Score =  199 bits (506), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 178/320 (55%), Gaps = 75/320 (23%)

Query: 1    MLLCSQEWQTSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKH 60
            MLLCSQEWQTSLQKHAGLAFIEL+NEGRL++H                            
Sbjct: 1488 MLLCSQEWQTSLQKHAGLAFIELVNEGRLMAH---------------------------- 1519

Query: 61   AELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFESHCAQTLQERRDEERLCDHLIS 120
                  A +DH++RVANEA+FILNR+RA+DV KHA+FE+   + L  R +E   CD LI+
Sbjct: 1520 ------ATRDHVLRVANEADFILNRLRAEDVSKHAQFEAESREQLAARHEEYGRCDLLIA 1573

Query: 121  AARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARRRKRFVRNPR 180
            + R RD   A R+L+K+S ILS++      +++    +FWKLD WEDD+RRRKRFV N  
Sbjct: 1574 SGRLRDSINATRLLEKMSAILSDQ------DDSKSGTQFWKLDVWEDDSRRRKRFVPNAY 1627

Query: 181  GTSHPNATLEKVAQKEVPEDAIAHANQEFHAQVAVVSQSSQANGANTCSELMDDSELIEG 240
            G+ H  A L +  + E PE                             SE     ++++G
Sbjct: 1628 GSRHEEANLPEGEKNEEPE----------------------------ISEQEKIRKVLKG 1659

Query: 241  EVAVVSQSSQANGANTCSELMDDSELIEGGGDIDIDLTG-PVNISTRARLISPGVSAQGT 299
               + S+   ++G++   EL+D+S++ +   ++D   +      ST A+LI+PGV   GT
Sbjct: 1660 ---LFSKRQNSSGSH---ELVDESDIDKWAQEVDPTPSSQSACFSTTAKLIAPGVVVPGT 1713

Query: 300  LSITSTELYFEVDEDCPDFR 319
            LS+T+ +L+F+ +E  P+++
Sbjct: 1714 LSVTANDLFFDANESDPNYK 1733



 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 347  ISTRARLISPGVSAQGTLSITSTELYFEVDEDCPDFR 383
             ST A+LI+PGV   GTLS+T+ +L+F+ +E  P+++
Sbjct: 1697 FSTTAKLIAPGVVVPGTLSVTANDLFFDANESDPNYK 1733


>sp|Q54U63|LVSC_DICDI BEACH domain-containing protein lvsC OS=Dictyostelium discoideum
            GN=lvsC PE=4 SV=2
          Length = 2491

 Score = 38.1 bits (87), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 112  ERLCDHLISAARRRDQGTAGRILDKVSNILSNKHGAWAYNEAARTQEFWKLDSWEDDARR 171
            ER   HL  A   R+Q T      K+   L+N+ G W   E+      WKLD  E+ +R 
Sbjct: 1544 ERRALHLYKARELRNQTTVQ--WRKILRSLTNERGPWGTTESI---VHWKLDKTENSSRM 1598

Query: 172  RKRFVRNPRGTSHPNATL 189
            R +  RN +   H N  +
Sbjct: 1599 RIKLKRNYKFDEHLNCAI 1616


>sp|A6VGE3|CBID_METM7 Putative cobalt-precorrin-6A synthase [deacetylating]
           OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
           GN=cbiD PE=3 SV=1
          Length = 366

 Score = 32.3 bits (72), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 59  KHAELLSHAMKDHIVRVANEAEFILNRMRADDV 91
           KHA++L HA +D I+ V+N  +++LN+ +   V
Sbjct: 222 KHAKILLHAEEDQIIEVSNFWDYMLNKAKEKGV 254


>sp|P49050|NIA_PICAN Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1
          Length = 859

 Score = 32.0 bits (71), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 40  RVANEAEFIL--NRMRADDVLKHAELLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEF 97
           RV  E   IL  N    DD +K AE   H        +  + E + NR + D V+K++EF
Sbjct: 459 RVKAEGGDILDNNWGEVDDTVKQAERRPH--------IDEDLEMMCNREKMDVVIKYSEF 510

Query: 98  ESH 100
           E+H
Sbjct: 511 EAH 513


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.130    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,447,927
Number of Sequences: 539616
Number of extensions: 5517866
Number of successful extensions: 14780
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 14734
Number of HSP's gapped (non-prelim): 64
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)