Query psy17735
Match_columns 96
No_of_seqs 60 out of 62
Neff 3.8
Searched_HMMs 29240
Date Fri Aug 16 21:38:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cjs_A UNC-13 homolog A, MUNC1 97.6 0.00041 1.4E-08 48.8 9.0 74 5-80 58-146 (167)
2 1rlw_A Phospholipase A2, CALB 97.6 0.001 3.4E-08 42.7 9.5 62 6-74 58-122 (126)
3 2dmh_A Myoferlin; beta-sandwic 97.3 0.0018 6E-08 42.3 8.0 72 6-78 55-136 (140)
4 3m7f_B E3 ubiquitin-protein li 97.3 0.003 1E-07 43.3 9.4 87 6-94 63-165 (176)
5 2cjt_A UNC-13 homolog A, MUNC1 97.1 0.0029 9.8E-08 42.3 8.0 66 6-73 50-130 (131)
6 3kwu_A MUNC13-1; calcium bindi 97.0 0.0093 3.2E-07 39.3 9.9 66 6-73 66-145 (148)
7 3l9b_A Otoferlin; C2-domain, b 96.9 0.0022 7.6E-08 46.0 6.5 70 6-76 66-141 (144)
8 2ep6_A MCTP2 protein; beta san 96.9 0.0027 9.3E-08 41.3 6.2 65 6-73 62-130 (133)
9 1wfj_A Putative elicitor-respo 96.8 0.0032 1.1E-07 40.9 6.0 67 6-74 60-129 (136)
10 3pyc_A E3 ubiquitin-protein li 96.7 0.008 2.7E-07 39.0 7.3 69 6-74 56-132 (132)
11 2yrb_A Protein fantom; beta sa 96.6 0.0041 1.4E-07 45.1 5.7 60 19-80 93-155 (156)
12 3b7y_A E3 ubiquitin-protein li 96.5 0.025 8.5E-07 37.4 8.9 67 6-73 75-151 (153)
13 2dmg_A KIAA1228 protein; beta- 96.3 0.0054 1.8E-07 40.2 4.6 60 6-65 77-142 (142)
14 3fbk_A RGS3, RGP3, regulator o 95.9 0.0073 2.5E-07 40.4 3.7 53 6-58 80-137 (153)
15 2fk9_A Protein kinase C, ETA t 95.7 0.043 1.5E-06 38.4 7.3 62 6-73 89-155 (157)
16 2q3x_A Regulating synaptic mem 95.5 0.045 1.6E-06 37.4 6.7 58 6-63 85-144 (171)
17 2r83_A Synaptotagmin-1; C2A-C2 95.2 0.12 4.3E-06 37.1 8.4 68 6-74 71-146 (284)
18 1ugk_A Synaptotagmin IV, KIAA1 95.2 0.081 2.8E-06 34.4 6.7 56 6-63 75-137 (138)
19 1gmi_A Protein kinase C, epsil 94.8 0.22 7.5E-06 32.4 8.0 62 6-74 67-132 (136)
20 1a25_A CALB, protein kinase C 93.8 0.14 4.9E-06 33.7 5.6 51 6-58 85-139 (149)
21 2enp_A B/K protein; C2 type 1, 93.8 0.066 2.2E-06 35.2 3.8 56 6-63 85-145 (147)
22 1rsy_A Synaptotagmin I; calciu 93.7 0.2 6.9E-06 33.1 6.2 52 6-58 94-150 (152)
23 3jzy_A Intersectin 2; C2 domai 93.7 0.18 6E-06 39.3 6.6 65 6-74 436-507 (510)
24 1wfm_A Synaptotagmin XIII; C2 93.5 0.16 5.6E-06 33.2 5.4 55 6-61 76-135 (138)
25 3fdw_A Synaptotagmin-like prot 93.0 0.14 4.8E-06 33.7 4.4 52 6-58 78-134 (148)
26 2nq3_A Itchy homolog E3 ubiqui 92.9 0.24 8.1E-06 34.5 5.7 67 6-74 85-160 (173)
27 2b3r_A Phosphatidylinositol-4- 92.8 0.38 1.3E-05 31.4 6.3 51 6-57 73-129 (134)
28 1djx_A PLC-D1, phosphoinositid 92.7 0.49 1.7E-05 39.6 8.3 65 6-74 554-623 (624)
29 3f04_A Synaptotagmin-1; C2A, c 91.9 0.4 1.4E-05 31.1 5.5 50 6-56 86-140 (143)
30 3rdl_A Protein kinase C alpha 91.9 0.32 1.1E-05 31.1 5.0 51 6-58 70-124 (137)
31 2d8k_A Synaptotagmin VII; exoc 91.0 0.42 1.4E-05 31.0 4.9 52 6-58 78-135 (141)
32 1v27_A Regulating synaptic mem 89.7 0.81 2.8E-05 29.2 5.4 52 6-58 75-133 (141)
33 3n5a_A Synaptotagmin-7; calciu 89.0 0.55 1.9E-05 29.8 4.1 39 6-45 70-113 (138)
34 2chd_A Rabphilin-3A, exophilin 88.2 1 3.4E-05 29.1 5.1 42 6-48 83-130 (142)
35 1rh8_A Piccolo protein; beta-s 86.5 1 3.5E-05 28.9 4.3 51 6-57 81-137 (142)
36 3bxj_A RAS GTPase-activating p 86.4 0.17 5.8E-06 40.6 0.6 70 6-75 59-157 (483)
37 2bwq_A Regulating synaptic mem 85.8 1.3 4.4E-05 27.9 4.4 42 6-47 72-120 (129)
38 2cm5_A Rabphilin-3A; protein t 85.6 1.8 6E-05 28.9 5.3 50 6-58 91-145 (166)
39 1tjx_A Similar to synaptotagmi 84.9 2.2 7.4E-05 28.2 5.4 38 6-44 79-121 (159)
40 2zkm_X 1-phosphatidylinositol- 84.9 2.8 9.5E-05 36.2 7.4 64 4-75 730-799 (799)
41 3ohm_B 1-phosphatidylinositol- 84.5 3.1 0.00011 36.7 7.6 67 4-78 776-848 (885)
42 2z0u_A WW domain-containing pr 83.4 2.3 8E-05 28.7 5.2 40 6-46 98-142 (155)
43 3qr0_A Phospholipase C-beta (P 81.6 4.7 0.00016 35.2 7.6 68 4-79 702-775 (816)
44 1w15_A Synaptotagmin IV; metal 81.5 4.8 0.00016 26.2 6.0 50 6-58 84-138 (153)
45 1dqv_A Synaptotagmin III; beta 81.1 9.7 0.00033 27.6 8.1 68 6-74 72-148 (296)
46 1yrk_A NPKC-delta, protein kin 75.4 8.8 0.0003 26.8 6.1 59 6-74 60-124 (126)
47 1cjy_A CPLA2, protein (cytosol 73.9 9.2 0.00032 33.1 7.1 51 6-58 73-126 (749)
48 2enj_A NPKC-theta, protein kin 71.0 8.4 0.00029 27.3 5.2 59 6-74 65-129 (138)
49 2r83_A Synaptotagmin-1; C2A-C2 63.9 15 0.00052 25.9 5.5 38 6-44 204-246 (284)
50 4a14_A Kinesin, kinesin-like p 36.5 6.9 0.00024 30.3 -0.2 20 62-82 8-27 (344)
51 3lre_A Kinesin-like protein KI 35.0 14 0.00047 28.9 1.3 17 64-81 9-25 (355)
52 1wdi_A Hypothetical protein TT 31.3 19 0.00066 28.9 1.6 14 58-71 71-84 (345)
53 1vky_A S-adenosylmethionine:tR 27.9 20 0.00069 28.8 1.2 15 58-72 81-95 (347)
54 1x88_A Kinesin-like protein KI 22.8 14 0.00048 28.8 -0.6 17 61-77 4-20 (359)
55 1goj_A Kinesin, kinesin heavy 21.6 18 0.00062 28.3 -0.2 15 63-77 4-18 (355)
56 1v8k_A Kinesin-like protein KI 21.2 19 0.00066 28.9 -0.1 17 64-81 70-86 (410)
57 2vvg_A Kinesin-2; motor protei 20.1 20 0.00067 28.0 -0.3 17 64-81 3-19 (350)
No 1
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=97.63 E-value=0.00041 Score=48.79 Aligned_cols=74 Identities=14% Similarity=0.149 Sum_probs=54.9
Q ss_pred eeEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccce-----eeee-eeec--CCC-----ccccCceEEE
Q psy17735 5 HLVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKC-----TIHD-AYDL--MDG-----RKTLGGKLEV 69 (96)
Q Consensus 5 ~~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~c-----eI~e-~~~l--~dG-----RK~tGGklEV 69 (96)
...|.|.+...... |+||.+. +..|..||+|.++|+.+.... +++. .+++ .+| .+|++|++.+
T Consensus 58 nE~f~f~v~~~~~~L~~~V~D~d--~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll 135 (167)
T 2cjs_A 58 EQDFMFEINRLDLGLTVEVWNKG--LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILL 135 (167)
T ss_dssp EEEEEEECCCTTSEEEEEEEECC--SSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CCEEEEEeeCCCCEEEEEEEECC--CCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEE
Confidence 36788888865444 9999997 667999999999999997655 2221 1222 244 3688999999
Q ss_pred EEEeeCCCCcc
Q psy17735 70 KIRIRNPIVSK 80 (96)
Q Consensus 70 ~vRlRePL~~~ 80 (96)
.+|+..|....
T Consensus 136 ~~~~e~~~~~~ 146 (167)
T 2cjs_A 136 DAHFELPLDIP 146 (167)
T ss_dssp EEEEECCCCCC
T ss_pred EEEeecCCCCc
Confidence 99999998654
No 2
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=97.57 E-value=0.001 Score=42.67 Aligned_cols=62 Identities=8% Similarity=0.163 Sum_probs=48.3
Q ss_pred eEEEEEeecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
+.|.|.+...... |+||....+ +|..+|.|.++|..|........-++|.+ .|++++.+++.
T Consensus 58 e~f~f~v~~~~~~~l~i~V~d~d~~--~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-----~~~g~i~~~le 122 (126)
T 1rlw_A 58 ETFEFILDPNQENVLEITLMDANYV--MDETLGTATFTVSSMKVGEKKEVPFIFNQ-----VTEMVLEMSLE 122 (126)
T ss_dssp EEEEEEECTTSCCEEEEEEEECCSS--CCEEEEEEEEEGGGSCTTCEEEEEEEETT-----TEEEEEEEEEE
T ss_pred ceEEEEecCCCCCEEEEEEEECCCC--CCceeEEEEEEHHHccCCCcEEEEEEcCC-----CceEEEEEEEE
Confidence 6788888543322 999998765 48899999999999998888888889864 46677777764
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.27 E-value=0.0018 Score=42.32 Aligned_cols=72 Identities=19% Similarity=0.272 Sum_probs=52.2
Q ss_pred eEEEEEeecc----cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeee---cCCC-ccccCceEEEEEEeeC
Q psy17735 6 LVLMLPLSHN----HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYD---LMDG-RKTLGGKLEVKIRIRN 75 (96)
Q Consensus 6 ~~f~~~I~R~----~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~---l~dG-RK~tGGklEV~vRlRe 75 (96)
..|.|.+... ... |+||....+ .+|.++|.|.++|..|...-....-++ +++. .+..+|.|.+.++...
T Consensus 55 e~f~f~v~~~~~~~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 55 EILEFDLRGIPLDFSSSLGIIVKDFETI-GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp EEEEEECSSCCCCTTCEEEEEEEETTCS-SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred cEEEEEecccccCCCCEEEEEEEECCCC-CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 5788887532 222 999987765 567899999999999977765555554 7762 3356799999999886
Q ss_pred CCC
Q psy17735 76 PIV 78 (96)
Q Consensus 76 PL~ 78 (96)
|-.
T Consensus 134 ~~~ 136 (140)
T 2dmh_A 134 PSG 136 (140)
T ss_dssp CBS
T ss_pred CCC
Confidence 543
No 4
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=97.25 E-value=0.003 Score=43.31 Aligned_cols=87 Identities=18% Similarity=0.323 Sum_probs=47.3
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccceeee------eeeecCC--CccccCceEEEEEEeeC
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIH------DAYDLMD--GRKTLGGKLEVKIRIRN 75 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~------e~~~l~d--GRK~tGGklEV~vRlRe 75 (96)
..|.|.+.-..+. |+||....+ .+|..||.|.++|..|...-... .-++|.. +.....|.|.++++...
T Consensus 63 e~f~f~v~~~~~~L~~~V~d~d~~-~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 63 EEILFRVLPQRHRILFEVFDENRL-TRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp EEEEEEECTTTCEEEEEEEECC-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ceEEEEEcCCCCEEEEEEEECCCC-CCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 5688888755444 899987654 56889999999999998764431 4566653 34446799999999976
Q ss_pred CCCccceeEE------EeeEEEEec
Q psy17735 76 PIVSKQLEQV------KEKWLVIDS 94 (96)
Q Consensus 76 PL~~~~~~~~------terWLVld~ 94 (96)
. .+++-+.. ..-|-+||.
T Consensus 142 ~-~~~~~~~~~~~~~~~~~~~~~~~ 165 (176)
T 3m7f_B 142 K-NGSEDENADQAEELEPGWVVLDQ 165 (176)
T ss_dssp -------------------------
T ss_pred C-CCCCccccccccCCCCCceEccC
Confidence 5 44333221 233888873
No 5
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=97.12 E-value=0.0029 Score=42.32 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=47.0
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccce-----eeee-eeecC--C----C-ccccCceEEEE
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKC-----TIHD-AYDLM--D----G-RKTLGGKLEVK 70 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~c-----eI~e-~~~l~--d----G-RK~tGGklEV~ 70 (96)
..|.|.+...... |+||.+. +.+|..+|+|.++|+.+.... +.+. .+++. + | .+||++.+.+.
T Consensus 50 E~f~f~v~~~~~~L~~~V~D~d--~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~ 127 (131)
T 2cjt_A 50 QDFMFEINRLDLGLTVEVWNKG--LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLD 127 (131)
T ss_dssp EEEEEEECCCSSEEEEEEEECC--SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEE
T ss_pred CEEEEEEeCCCCeEEEEEEECC--CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEE
Confidence 6788888754434 9999998 667999999999999987554 1111 12222 2 3 78999999999
Q ss_pred EEe
Q psy17735 71 IRI 73 (96)
Q Consensus 71 vRl 73 (96)
+|.
T Consensus 128 ~~~ 130 (131)
T 2cjt_A 128 AHF 130 (131)
T ss_dssp EEE
T ss_pred EEe
Confidence 985
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.05 E-value=0.0093 Score=39.28 Aligned_cols=66 Identities=12% Similarity=0.244 Sum_probs=49.7
Q ss_pred eEEEEEeecccce--eEEEecccc----------ccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEE
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGF----------FRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKI 71 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggf----------frsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~v 71 (96)
..|.|.+...... |+||....+ ..+|..+|.|.++|..+.. +...-++|.. +.....|.|.+.+
T Consensus 66 e~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~--~~~~w~~L~~~~~~~~~~G~i~l~l 143 (148)
T 3kwu_A 66 ENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSG--EMDVWYNLDKRTDKSAVSGAIRLHI 143 (148)
T ss_dssp EEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCS--EEEEEEECBCSSTTCCCCCEEEEEE
T ss_pred cEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCcC--CCCEEEEcccCCCCCCCceEEEEEE
Confidence 4688888655444 899998876 3789999999999999943 4556678873 3444669988888
Q ss_pred Ee
Q psy17735 72 RI 73 (96)
Q Consensus 72 Rl 73 (96)
++
T Consensus 144 ~~ 145 (148)
T 3kwu_A 144 SV 145 (148)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 7
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=96.94 E-value=0.0022 Score=46.03 Aligned_cols=70 Identities=17% Similarity=0.308 Sum_probs=56.8
Q ss_pred eEEEEEeecccce-----eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC-CccccCceEEEEEEeeCC
Q psy17735 6 LVLMLPLSHNHQS-----LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD-GRKTLGGKLEVKIRIRNP 76 (96)
Q Consensus 6 ~~f~~~I~R~~R~-----fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d-GRK~tGGklEV~vRlReP 76 (96)
..|.+++.+.-=. +.||.-.-+| +|++||++.+.|+.|...-.+.-..+|.| ..+++||.|++.|+-..|
T Consensus 66 E~F~wpl~~~ld~~e~L~v~V~d~~~v~-~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 66 ETFRWPVASSIDRNEVLEIQIFNYSKVF-SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEESSCCCTTCEEEEEEEEECTTS-CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred ceEEecCCCCCCCCCEEEEEEEECcccc-CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 4688887763211 7777766677 67999999999999999988888889997 689999999999987765
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.90 E-value=0.0027 Score=41.31 Aligned_cols=65 Identities=15% Similarity=0.344 Sum_probs=49.2
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEEEe
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKIRI 73 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~vRl 73 (96)
+.|.|++...+.. |+||....+ .+|..+|.|.++|..|....+ .-++|.+ ++....|.|.+++++
T Consensus 62 e~f~f~~~~~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~~~--~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 62 KVFTFPIKDIHDVLEVTVFDEDGD-KPPDFLGKVAIPLLSIRDGQP--NCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp EEEEEEESCTTCEEEEEEEEEETT-EEEEECCBCEEEGGGCCSSCC--EECCCBCSCTTSCCSSEEEEEEEE
T ss_pred cEEEEEecCCCCEEEEEEEECCCC-CCCCeeEEEEEEHHHccCCCc--eEEEeecCCCCCccceEEEEEEEE
Confidence 5788888755444 899987654 568899999999999976543 5677774 445677999998875
No 9
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=96.82 E-value=0.0032 Score=40.85 Aligned_cols=67 Identities=16% Similarity=0.297 Sum_probs=48.4
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccceee-eeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTI-HDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI-~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
..|.|++...... |+||.+.. +.+|..+|.|.++|..|....+. ..-++|..+. ...|.|.+.++..
T Consensus 60 e~f~f~v~~~~~~l~~~V~d~~~-~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~-~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 60 ETFIFTVSEGTTELKAKIFDKDV-GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDE-EYKGEIWVALSFK 129 (136)
T ss_dssp EEEEEEEESSCCEEEEEECCSSS-CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEETT-EEEEEEEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEEEECCC-CCCCceEEEEEEEHHHhccCCCCCcEEEEeecCC-ccCEEEEEEEEEE
Confidence 5788888864434 89998754 56788999999999999544443 3457776333 3459999988875
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=96.71 E-value=0.008 Score=38.99 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=47.5
Q ss_pred eEEEEEeecccce-eEEEeccccccC--CceeEEEEEecccc-ccceeeeeeeecCC--C--ccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS-LSFSTSRGFFRS--DTLVGTVNVKLQPL-ETKCTIHDAYDLMD--G--RKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~-fev~~kggffrs--d~~vGta~vkL~~L-et~ceI~e~~~l~d--G--RK~tGGklEV~vRlR 74 (96)
..|.|.+.....- |+||....+-++ |..+|.|.++|+.| ...-.....++|.. + .....|.|.|.+..|
T Consensus 56 e~f~f~v~~~~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 56 QHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp EEEEEEEETTCCEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 4688888665322 999999888654 88999999999988 11111224477753 2 223579999988765
No 11
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.59 E-value=0.0041 Score=45.10 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=47.7
Q ss_pred eEEEeccccccCCceeEEEEEecccccccee-eeeeeecCCCcc--ccCceEEEEEEeeCCCCcc
Q psy17735 19 LSFSTSRGFFRSDTLVGTVNVKLQPLETKCT-IHDAYDLMDGRK--TLGGKLEVKIRIRNPIVSK 80 (96)
Q Consensus 19 fev~~kggffrsd~~vGta~vkL~~Let~ce-I~e~~~l~dGRK--~tGGklEV~vRlRePL~~~ 80 (96)
+|+++.-|- .-+.+|+|+|+|.+|...-+ |+...+|..-+- ..=|.||+.||+|-|++..
T Consensus 93 lELhqa~g~--~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi~~s 155 (156)
T 2yrb_A 93 LEVHQAYST--EYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRVSGPSS 155 (156)
T ss_dssp EEEEEECSS--CEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEECCCCC
T ss_pred EEEEEeeCC--CceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEecccCCC
Confidence 788885442 45699999999999986666 999999985333 4679999999999999753
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=96.53 E-value=0.025 Score=37.38 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=48.3
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEecccccccee-----e-eeeeecCC--CccccCceEEEEEEe
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCT-----I-HDAYDLMD--GRKTLGGKLEVKIRI 73 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~ce-----I-~e~~~l~d--GRK~tGGklEV~vRl 73 (96)
+.|.|++...... |+||.... +.+|..+|.|.++|..|..... + ..-++|.. +.....|.|.+.+..
T Consensus 75 e~f~f~v~~~~~~l~~~V~d~d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 151 (153)
T 3b7y_A 75 EEILFRVHPQQHRLLFEVFDENR-LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY 151 (153)
T ss_dssp EEEEEEECTTTCEEEEEEEECCS-SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE
T ss_pred CEEEEEecCCCCEEEEEEEECCC-CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE
Confidence 4688888765444 89998764 4578899999999999977653 2 35667753 344567999988864
No 13
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.33 E-value=0.0054 Score=40.17 Aligned_cols=60 Identities=23% Similarity=0.316 Sum_probs=45.0
Q ss_pred eEEEEEeecc---cce--eEEEecccccc-CCceeEEEEEeccccccceeeeeeeecCCCccccCc
Q psy17735 6 LVLMLPLSHN---HQS--LSFSTSRGFFR-SDTLVGTVNVKLQPLETKCTIHDAYDLMDGRKTLGG 65 (96)
Q Consensus 6 ~~f~~~I~R~---~R~--fev~~kggffr-sd~~vGta~vkL~~Let~ceI~e~~~l~dGRK~tGG 65 (96)
+.|.|++... .+. |+||....+.+ .|.++|.|.++|..+........-++|.+..++..|
T Consensus 77 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~~~G 142 (142)
T 2dmg_A 77 QSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGPSSG 142 (142)
T ss_dssp EEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSCCCC
T ss_pred ceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCCCCC
Confidence 5788887542 123 99999988876 467999999999999876677788899875444433
No 14
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=95.89 E-value=0.0073 Score=40.44 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=41.4
Q ss_pred eEEEEEee--cccce--eEEEeccccccCCceeEEEEEecccccc-ceeeeeeeecCC
Q psy17735 6 LVLMLPLS--HNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLET-KCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~--R~~R~--fev~~kggffrsd~~vGta~vkL~~Let-~ceI~e~~~l~d 58 (96)
..|.|.+. .-.+. |+||....+-++|..+|.+.++|..|.+ ...+..-++|.+
T Consensus 80 e~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 80 EHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred cEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 57888873 22222 8999988887779999999999999986 677778888875
No 15
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=95.75 E-value=0.043 Score=38.39 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=46.1
Q ss_pred eEEEEEeecccce-eEEEeccccccCCceeEEEEEeccccccc----eeeeeeeecCCCccccCceEEEEEEe
Q psy17735 6 LVLMLPLSHNHQS-LSFSTSRGFFRSDTLVGTVNVKLQPLETK----CTIHDAYDLMDGRKTLGGKLEVKIRI 73 (96)
Q Consensus 6 ~~f~~~I~R~~R~-fev~~kggffrsd~~vGta~vkL~~Let~----ceI~e~~~l~dGRK~tGGklEV~vRl 73 (96)
..|.|.+.....- |+||.+.. +..|..+|.|.++|++|... -.+..-++|.. .|+|-+++++
T Consensus 89 E~F~f~v~~~~~L~~~V~D~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-----~G~i~l~l~~ 155 (157)
T 2fk9_A 89 EEFCANVTDGGHLELAVFHETP-LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-----EGKVFVVITL 155 (157)
T ss_dssp EEEEEEEEEECEEEEEEEECCS-SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-----SCEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEEEECCC-CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-----CcEEEEEEEE
Confidence 5678887643211 88988654 45688999999999999876 45667788842 6999988876
No 16
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=95.54 E-value=0.045 Score=37.44 Aligned_cols=58 Identities=14% Similarity=0.191 Sum_probs=44.1
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCCCcccc
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGRKTL 63 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGRK~t 63 (96)
+.|.|.+.-..+. |+||+....+.+|..+|.|.++|..|.....+..-++|...-+..
T Consensus 85 e~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~ 144 (171)
T 2q3x_A 85 QSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLV 144 (171)
T ss_dssp EEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGGGGS
T ss_pred cEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCccccC
Confidence 5688887654434 999955556788899999999999998766788888887644433
No 17
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=95.22 E-value=0.12 Score=37.05 Aligned_cols=68 Identities=10% Similarity=0.201 Sum_probs=50.2
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCCCc---cccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGR---KTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGR---K~tGGklEV~vRlR 74 (96)
+.|.|.+.... +. |+||.... +.+|..+|.|.++|..+...-.+..-++|.+.. ....|.|.+.++..
T Consensus 71 e~f~f~v~~~~~~~~~l~~~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~ 146 (284)
T 2r83_A 71 EQFTFKVPYSELAGKTLVMAVYDFDR-FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV 146 (284)
T ss_dssp EEEEECCCGGGCTTCEEEEEEEECCS-SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE
T ss_pred ceEEEEechHHhCcCEEEEEEEECCC-CCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec
Confidence 67888887542 22 89998765 567889999999999998887778888887532 23457777766654
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.17 E-value=0.081 Score=34.36 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=37.6
Q ss_pred eEEEEE-eecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeee-eecCCCcccc
Q psy17735 6 LVLMLP-LSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDA-YDLMDGRKTL 63 (96)
Q Consensus 6 ~~f~~~-I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~-~~l~dGRK~t 63 (96)
+.|.|. +... .+. |+||.... +.+|..+|.|.++|..|.......+. .+| ..|+..
T Consensus 75 e~f~f~~v~~~~~~~~~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l-~~~~~s 137 (138)
T 1ugk_A 75 ETFTFYGIPYTQIQELALHFTILSFDR-FSRDDIIGEVLIPLSGIELSEGKMLMNREI-ISGPSS 137 (138)
T ss_dssp EEEEEECCCSTTGGGCEEEEEEEEECS-SCCCCCCEEEEEECTTCCCTTCCEEEEEEC-BSSSSC
T ss_pred eEEEEcCcCHHHhccCEEEEEEEECCC-CCCCcEEEEEEEehhHccCCCCcchhhhhh-hcCCCC
Confidence 567774 6542 123 89999765 56777999999999999876544444 555 344444
No 19
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=94.78 E-value=0.22 Score=32.35 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=44.3
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccce--eeeeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKC--TIHDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~c--eI~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
..|.|.+... +. |+||.... +.+|..+|.|.++|+.+.... .+..-+++. + .|+|.+++.+.
T Consensus 67 E~f~f~v~~~-~~L~~~V~d~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~----~-~G~i~l~l~~~ 132 (136)
T 1gmi_A 67 DEFVTDVCNG-RKIELAVFHDAP-IGYDDFVANCTIQFEELLQNGSRHFEDWIDLE----P-EGKVYVIIDLS 132 (136)
T ss_dssp EEEEEEEEEE-CEEEEEEEECCS-SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB----S-SCEEEEEEEEE
T ss_pred CEEEEEecCC-CEEEEEEEeCCC-CCCCCEEEEEEEEHHHhcccCCCCccEEEEcC----C-CeEEEEEEEEE
Confidence 4688887655 34 89998765 456789999999999988742 234445552 2 69998888764
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=93.84 E-value=0.14 Score=33.65 Aligned_cols=51 Identities=8% Similarity=0.203 Sum_probs=38.6
Q ss_pred eEEEEEeeccc--ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHNH--QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~~--R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
+.|.|.+.... +. |+||....+ .+|.++|.|.++|..|... ....-++|.+
T Consensus 85 e~f~f~v~~~~~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 85 ETFRFQLKESDKDRRLSVEIWDWDLT-SRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp EEEEEECCSGGGGCEEEEEEEECCSS-SCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred cEEEEEeccccCCCEEEEEEEECCCC-CCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 56888886542 23 899988765 6688999999999999876 4666677764
No 21
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.81 E-value=0.066 Score=35.17 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=38.4
Q ss_pred eEEEEEeecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCCCcccc
Q psy17735 6 LVLMLPLSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGRKTL 63 (96)
Q Consensus 6 ~~f~~~I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGRK~t 63 (96)
+.|.|++... .+. |+||....+ .+|.++|.|.++|..|......+.-.+|. .+.+.
T Consensus 85 e~f~f~v~~~~l~~~~L~~~V~d~d~~-~~~~~iG~~~i~l~~l~~~~~~~~w~~L~-~~~~~ 145 (147)
T 2enp_A 85 ERYTFEIPFLEAQRRTLLLTVVDFDKF-SRHCVIGKVSVPLCEVDLVKGGHWWKALI-PSGPS 145 (147)
T ss_dssp BCCEECCCHHHHHHSEEEEEEECCSTT-CCSCCCEEEEEETTTSCTTTCCCEEECCB-CCCCC
T ss_pred eeEEEEeChHHhccCEEEEEEEECCCC-cCCcEEEEEEEechhcCCCCCccEEEEee-cCCCC
Confidence 5677777642 123 899987765 55679999999999998776665555554 44433
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=93.73 E-value=0.2 Score=33.13 Aligned_cols=52 Identities=10% Similarity=0.202 Sum_probs=39.4
Q ss_pred eEEEEEeecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.|... .+. |+||.... +.+|.++|.|.++|..|....++..-++|.+
T Consensus 94 e~f~f~v~~~~l~~~~L~i~V~d~d~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 94 EQFTFKVPYSELGGKTLVMAVYDFDR-FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EEEEECCCHHHHTTCEEEEEEEECCS-SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ccEEEeecHHHcCCCEEEEEEEECCC-CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 5788887653 223 89998865 4678899999999999977666777777754
No 23
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=93.65 E-value=0.18 Score=39.28 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=46.6
Q ss_pred eEEEEEeecccce---eEEEeccccccCCceeEEEEEecccccccee----eeeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCT----IHDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ce----I~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
..|.|.+...... |+||.... +.+|..+|.|.++|..|...-. +..-+++... ..|.|.|.+.++
T Consensus 436 e~f~f~~~~~~~~~l~~~v~d~d~-~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~---~~G~i~l~~~l~ 507 (510)
T 3jzy_A 436 FNCQFFIKDLYQDVLCLTLFDRDQ-FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV---PTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEESCTTTCEEEEEEEECCS-SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS---SSCEEEEEEEEE
T ss_pred ceEEEEecCCCCCEEEEEEEeCCC-CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC---CCceEEEEEEEE
Confidence 4677877654433 89998765 4567899999999999876443 5555665432 459999998875
No 24
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=93.53 E-value=0.16 Score=33.24 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=39.2
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCCCcc
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGRK 61 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGRK 61 (96)
..|.|.|.... +. |+||....+ ..|.++|.|.++|..+...-....-++|....|
T Consensus 76 E~f~f~v~~~~l~~~~L~~~V~d~d~~-~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 76 EGLVLPLAEEELPTATLTLTLRTCDRF-SRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp SCEEEECCTTSSTTCEEEEEEEECCSS-CTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred ceEEEEecHHHcCCCEEEEEEEECCCC-CCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 46778776542 23 899987654 667899999999999975545566677765433
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=93.00 E-value=0.14 Score=33.68 Aligned_cols=52 Identities=12% Similarity=0.238 Sum_probs=40.7
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.|.... +. |+||.... +.+|.++|.|.++|..|...-....-++|..
T Consensus 78 e~f~f~v~~~~~~~~~L~~~V~d~d~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 78 ETLRYEIPESLLAQRTLQFSVWHHGR-FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp EEEEEECCSTTGGGCEEEEEEEEECG-GGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred eEEEEEeChhHhCceEEEEEEEECCC-CcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 67888886642 22 89998655 5678899999999999988777778888874
No 26
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=92.92 E-value=0.24 Score=34.46 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=46.4
Q ss_pred eEEEEEeecccce--eEEEeccccccCCceeEEEEEeccccccc-----eeeeeeeecCCC--ccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETK-----CTIHDAYDLMDG--RKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kggffrsd~~vGta~vkL~~Let~-----ceI~e~~~l~dG--RK~tGGklEV~vRlR 74 (96)
+.|.|.++- ... |+||.... +.+|..+|.|.++|..|... .++...++|... .....|+|.|.+..-
T Consensus 85 e~f~f~v~~-~~~L~~~V~D~d~-~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 85 QPLTVIVTP-VSKLHFRVWSHQT-LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGL 160 (173)
T ss_dssp EEEEEEECT-TCEEEEEEEECCS-SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESE
T ss_pred CEEEEEeCC-CCEEEEEEEECCC-CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeee
Confidence 568888864 223 99998764 46888999999999988642 224456777642 333568888887654
No 27
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=92.81 E-value=0.38 Score=31.38 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=37.9
Q ss_pred eEEEEE-eecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecC
Q psy17735 6 LVLMLP-LSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLM 57 (96)
Q Consensus 6 ~~f~~~-I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~ 57 (96)
+.|.|. +... .+. |+||.... +.+|.++|.+.++|..|...-+...-++|.
T Consensus 73 E~f~f~~v~~~~l~~~~L~~~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 73 EMLVYSGYSKETLRQRELQLSVLSAES-LRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EEEEEESCCHHHHTTCEEEEEEEECCS-SSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred cEEEECCcCHHHhCcCEEEEEEEECCC-CCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 578888 6543 123 89998875 456789999999999998766666666765
No 28
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=92.72 E-value=0.49 Score=39.56 Aligned_cols=65 Identities=14% Similarity=0.244 Sum_probs=50.4
Q ss_pred eEEEEEeecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~vRlR 74 (96)
..|.|.+.-..-+ |+||....+ .+|..+|.+.++|..|..- .+ .+||.| |..-.+|.|=|+|.+.
T Consensus 554 E~f~F~v~~~el~~L~~~V~D~D~~-~~dd~iG~~~ipl~~L~~G--~r-~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 554 MEFEFEVTVPDLALVRFMVEDYDSS-SKNDFIGQSTIPWNSLKQG--YR-HVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EEEEEEESCGGGCEEEEEEEECCSS-SCCEEEEEEEEEGGGBCCE--EE-EEEEECTTSCEEEEEEEEEEEEEE
T ss_pred ceEEEEEecCCCCEEEEEEEEcCCC-CCCceeEEEEEEHHHcCCC--cE-EEeCCCCCcCCCCceEEEEEEEEE
Confidence 4688888755433 899987644 6688999999999999774 33 789986 6666789999999875
No 29
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=91.91 E-value=0.4 Score=31.07 Aligned_cols=50 Identities=10% Similarity=0.225 Sum_probs=37.2
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeec
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDL 56 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l 56 (96)
..|.|.+.... +. |+||....+ .+|..+|.|.++|..|...-+...-++|
T Consensus 86 e~f~f~v~~~~l~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L 140 (143)
T 3f04_A 86 EQFTFKVPYSELGGKTLVMAVYDFDRF-SKHDIIGEFKVPMNTVDFGHVTEEWRDL 140 (143)
T ss_dssp EEEEECCCHHHHTTCEEEEEEEECCSS-SCCEEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred CeEEEeecHhhcCCCEEEEEEEeCCCC-CCCceEEEEEEEHHHccCCCCcceEEEC
Confidence 56778776432 23 899987664 5788999999999999877666666665
No 30
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=91.90 E-value=0.32 Score=31.05 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=38.3
Q ss_pred eEEEEEeeccc--ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHNH--QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~~--R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.+.... +. |+||....+ .+|..+|.|.+.|..|.... ...-++|.+
T Consensus 70 e~f~f~~~~~~~~~~l~i~v~d~d~~-~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 70 ESFTFKLKPSDKDRRLSVEIWDWDRT-TRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp EEEEEECCGGGGGCEEEEEEEECCSS-SCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred cEEEEEcCchhcCCEEEEEEEECCCC-CCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 56888876532 22 899997654 56889999999999997654 677778875
No 31
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.99 E-value=0.42 Score=30.99 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=37.0
Q ss_pred eEEEEEe-ecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPL-SHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I-~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.+ ... .+. |+||....+ .+|.++|.|.++|..|........-++|..
T Consensus 78 e~f~f~~~~~~~~~~~~l~i~V~d~d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 78 ETFLFEGFPYEKVVQRILYLQVLDYDRF-SRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEEEECSCCHHHHTTSEEEEEEEECCSS-SSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred cEEEECccCHHHcccCEEEEEEEECCCC-CCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 4677764 211 122 899988764 568899999999999988766666667653
No 32
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=89.72 E-value=0.81 Score=29.21 Aligned_cols=52 Identities=8% Similarity=0.121 Sum_probs=37.7
Q ss_pred eEEEEEe-ecc---cce--eEEEecccccc-CCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPL-SHN---HQS--LSFSTSRGFFR-SDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I-~R~---~R~--fev~~kggffr-sd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
+.|.|.+ ... .+. |+||....+-+ +|..+|.|.++|..|.... ...-++|.+
T Consensus 75 e~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 75 QTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp CCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred cEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 4677773 322 122 99999887755 4899999999999987654 666778774
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=88.96 E-value=0.55 Score=29.82 Aligned_cols=39 Identities=3% Similarity=0.187 Sum_probs=29.9
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccc
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLE 45 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Le 45 (96)
+.|.|.+.... +. |+||....+ .+|..+|.|.++|..+.
T Consensus 70 e~f~f~v~~~~l~~~~l~~~V~d~~~~-~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 70 ESFAFDIPTEKLRETTIIITVMDKDKL-SRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEEEEECCGGGGGGEEEEEEEEECCSS-SCCEEEEEEEESSSSCH
T ss_pred ceEEEECChhhcCceEEEEEEEECCCC-CCCcEEEEEEEccccCC
Confidence 67888876554 22 899997765 57889999999998754
No 34
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=88.25 E-value=1 Score=29.09 Aligned_cols=42 Identities=14% Similarity=0.328 Sum_probs=30.4
Q ss_pred eEEEEE-eeccc---ce--eEEEeccccccCCceeEEEEEeccccccce
Q psy17735 6 LVLMLP-LSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKC 48 (96)
Q Consensus 6 ~~f~~~-I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~c 48 (96)
+.|.|. +.... +. |+||....+ .+|..+|.|.++|..|...-
T Consensus 83 e~f~f~~~~~~~~~~~~l~i~V~d~d~~-~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 83 ETLQYHGITEEDMQRKTLRISVCDEDKF-GHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp EEEEEESCCHHHHHHCEEEEEEEEECTT-SCEEEEEEEEEEGGGCCTTC
T ss_pred CEEEEcccCHHHccCCEEEEEEEECCCC-CCCcEEEEEEEEHHHcCCCC
Confidence 468877 54322 22 899988654 56889999999999886544
No 35
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=86.52 E-value=1 Score=28.95 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=34.7
Q ss_pred eEEEEE-eecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecC
Q psy17735 6 LVLMLP-LSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLM 57 (96)
Q Consensus 6 ~~f~~~-I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~ 57 (96)
..|.|. +.-. .+. |+||.... +.+|..+|.|.++|..+...-....-++|.
T Consensus 81 e~f~f~~v~~~~l~~~~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 137 (142)
T 1rh8_A 81 QTVIYKSISMEQLMKKTLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLDNTPRWYPLK 137 (142)
T ss_dssp EEEEECSCCHHHHTTCEEEEEEEEECS-SSCEEEEEEEEEETTSCGGGTTCCEEEECB
T ss_pred CEEEECCcCHHHccCCEEEEEEEECCC-CCCCceEEEEEEeccccccCCCCCeEEECC
Confidence 457776 4432 223 89999876 456789999999999886544444555554
No 36
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=86.38 E-value=0.17 Score=40.60 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=13.3
Q ss_pred eEEEEEeecccce--eEEEecc---ccccCCceeEEEEEeccccccceeeeeeeecCCCcc-------------------
Q psy17735 6 LVLMLPLSHNHQS--LSFSTSR---GFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMDGRK------------------- 61 (96)
Q Consensus 6 ~~f~~~I~R~~R~--fev~~kg---gffrsd~~vGta~vkL~~Let~ceI~e~~~l~dGRK------------------- 61 (96)
..|.|++.-.... ++||... +-+..|..+|.+.++|+.|...-....-++|.+.+.
T Consensus 59 E~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~ 138 (483)
T 3bxj_A 59 EHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGS 138 (483)
T ss_dssp CCEECC------------------------------------------CCEECC--------------------------
T ss_pred cEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccc
Confidence 4566664322222 8888852 336778899999999999998777777888865331
Q ss_pred -----ccCceEEEEEEeeC
Q psy17735 62 -----TLGGKLEVKIRIRN 75 (96)
Q Consensus 62 -----~tGGklEV~vRlRe 75 (96)
..+|.|.+++|..+
T Consensus 139 ~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 139 GGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp ------------CEEEEEE
T ss_pred cccCCCCCceEEEEEEeee
Confidence 34688888887653
No 37
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=85.77 E-value=1.3 Score=27.92 Aligned_cols=42 Identities=5% Similarity=0.140 Sum_probs=26.9
Q ss_pred eEEEEEe-ecc---cce--eEEEecccccc-CCceeEEEEEeccccccc
Q psy17735 6 LVLMLPL-SHN---HQS--LSFSTSRGFFR-SDTLVGTVNVKLQPLETK 47 (96)
Q Consensus 6 ~~f~~~I-~R~---~R~--fev~~kggffr-sd~~vGta~vkL~~Let~ 47 (96)
..|.|.+ ... ... |+||....+-+ +|..+|.|.++|..+...
T Consensus 72 e~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~ 120 (129)
T 2bwq_A 72 QTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLD 120 (129)
T ss_dssp EEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCS
T ss_pred cEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCC
Confidence 5778874 322 122 99999887754 589999999999988654
No 38
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=85.57 E-value=1.8 Score=28.89 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=34.9
Q ss_pred eEEEEEeecc---cce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
+.|.|.+... .+. |+||....+ .+|..+|.|.+.|..+.. ....-++|++
T Consensus 91 e~f~f~v~~~~l~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~~~~--~~~~W~~l~~ 145 (166)
T 2cm5_A 91 EEFFYDIKHSDLAKKSLDISVWDYDIG-KSNDYIGGCQLGISAKGE--RLKHWYECLK 145 (166)
T ss_dssp EEEEEECCGGGGGGCEEEEEEEECCSS-SCCEEEEEEEEETTCCHH--HHHHHHHHHH
T ss_pred ceEEEEcchHhcCCCEEEEEEEECCCC-CCCcEEEeEEEecccCCc--hhHHHHHHHh
Confidence 5788888653 223 899997754 678899999999998643 3334455553
No 39
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=84.87 E-value=2.2 Score=28.15 Aligned_cols=38 Identities=8% Similarity=0.112 Sum_probs=29.2
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEecccc
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPL 44 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~L 44 (96)
..|.|.|.... +. |+||.... +.+|..+|.|.++|..+
T Consensus 79 e~f~f~v~~~~l~~~~l~i~V~d~d~-~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 79 ESFSFEVPFEQIQKVQVVVTVLDYDK-IGKNDAIGKVFVGYNST 121 (159)
T ss_dssp EEEEEECCGGGGGGCEEEEEEEECCS-SSCCEEEEEEEEETTCC
T ss_pred ceEEEEcCHHHhCCcEEEEEEEECCC-CCCCceEEEEEECCCCC
Confidence 67888886542 22 89998766 46788999999999875
No 40
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=84.85 E-value=2.8 Score=36.21 Aligned_cols=64 Identities=8% Similarity=0.142 Sum_probs=47.7
Q ss_pred eeeEEEE-Eeecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEEEeeC
Q psy17735 4 RHLVLML-PLSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKIRIRN 75 (96)
Q Consensus 4 ~~~~f~~-~I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~vRlRe 75 (96)
|...|.| .|.-..-+ |+||-.. |..+|.+.++|..|..- ++ .+||.| |....++.|=|+|.+++
T Consensus 730 nEe~f~F~~v~~~el~~Lr~~V~D~d-----~d~iG~~~ipl~~L~~G--~r-~v~L~~~~g~~~~~~~Lfv~i~~~~ 799 (799)
T 2zkm_X 730 KEEPFVFEKILMPELASLRVAVMEEG-----NKFLGHRIIPINALNSG--YH-HLCLHSESNMPLTMPALFIFLEMKD 799 (799)
T ss_dssp CCCCEEEEEESSGGGCEEEEEEEETT-----TEEEEEEEEEGGGBCCE--EE-EEEEECTTCCEEEEEEEEEEEEEEC
T ss_pred ecceEEEEEEccCCccEEEEEEEEeC-----CCccceEeeehhhcCCC--cE-EEeccCCCCCCCCceEEEEEEEEEC
Confidence 3335888 67444334 8999875 78999999999999764 33 689987 66667789999998763
No 41
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=84.53 E-value=3.1 Score=36.71 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=50.3
Q ss_pred eeeEEEEE-eecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEEEeeCCC
Q psy17735 4 RHLVLMLP-LSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKIRIRNPI 77 (96)
Q Consensus 4 ~~~~f~~~-I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~vRlRePL 77 (96)
|-..|.|. |.-..=+ |+||-.. |..+|.+.++|..|..- ++ .+||.| |..-..|.|-|+|.+.++.
T Consensus 776 nEe~F~F~~V~~pela~Lrf~V~D~d-----ddfiG~~~lpL~~L~~G--yR-~vpL~~~~g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 776 DEEPFDFPKVVLPTLASLRIAAFEEG-----GKFVGHRILPVSAIRSG--YH-YVCLRNEANQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp CCCCEEEEEESCGGGCEEEEEEEETT-----TEEEEEEEEETTTCCCE--EE-EEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred ccceeEEeeEEcCCcCEEEEEEEcCC-----ccEEeeEEEEHHHcCCC--ce-EEEecCCCCCccCceEEEEEEEEEecC
Confidence 33357776 5322212 8999865 78999999999999865 33 589996 7777899999999999865
Q ss_pred C
Q psy17735 78 V 78 (96)
Q Consensus 78 ~ 78 (96)
.
T Consensus 848 ~ 848 (885)
T 3ohm_B 848 P 848 (885)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=83.37 E-value=2.3 Score=28.73 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=30.7
Q ss_pred eEEEEEeecc---cce--eEEEeccccccCCceeEEEEEecccccc
Q psy17735 6 LVLMLPLSHN---HQS--LSFSTSRGFFRSDTLVGTVNVKLQPLET 46 (96)
Q Consensus 6 ~~f~~~I~R~---~R~--fev~~kggffrsd~~vGta~vkL~~Let 46 (96)
..|.|+|... .+. |+||....+ .+|..+|.+.+.|+.|..
T Consensus 98 E~F~f~v~~~~l~~~~L~~~V~d~d~~-~~~d~iG~~~i~l~~l~~ 142 (155)
T 2z0u_A 98 EVFWVSMSYPALHQKTLRVDVCTTDRS-HLEECLGGAQISLAEVCR 142 (155)
T ss_dssp EEEEEECCHHHHHHCEEEEEEEEECTT-SCEEEEEEEEEECTTSCT
T ss_pred cEEEEEcCHHHhCcCEEEEEEEECCCC-CCCcEEEEEEEEHHHccC
Confidence 5788888753 233 899987665 567799999999999863
No 43
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=81.61 E-value=4.7 Score=35.16 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=49.4
Q ss_pred eeeEEEEE-eecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC--CccccCceEEEEEEeeCCC
Q psy17735 4 RHLVLMLP-LSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD--GRKTLGGKLEVKIRIRNPI 77 (96)
Q Consensus 4 ~~~~f~~~-I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d--GRK~tGGklEV~vRlRePL 77 (96)
|-+.|.|. |.-..=+ |+||-.. |..+|.+.++|..|..- ++ .+||.| |..-.-+.|-|+|.+.+..
T Consensus 702 NE~~F~F~~v~~pela~Lrf~V~D~d-----ddfiG~~~ipL~~L~~G--yR-~vpL~~~~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 702 DEKVFVFKKVVLPDLAVVRIIVSEEN-----GKFIGHRVMPLDGIKPG--YR-HVPLRNESNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp CCCCEEEEEESCGGGCEEEEEEEETT-----SCEEEEEEEESTTCCCE--EE-EEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred cCceeEEccccCCCccEEEEEEEecC-----CCeeeEEEEEHHHcCCc--ce-EEEEeCCCCCCCCceEEEEEEEEEecC
Confidence 43447776 5322212 8898863 78999999999999875 33 599996 6665569999999999876
Q ss_pred Cc
Q psy17735 78 VS 79 (96)
Q Consensus 78 ~~ 79 (96)
..
T Consensus 774 ~~ 775 (816)
T 3qr0_A 774 SD 775 (816)
T ss_dssp C-
T ss_pred ch
Confidence 54
No 44
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=81.51 E-value=4.8 Score=26.17 Aligned_cols=50 Identities=8% Similarity=0.047 Sum_probs=33.8
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.|.... +. |+||.... +.+|..+|.|.+.|... ..+...-++|++
T Consensus 84 e~f~f~v~~~~l~~~~l~v~V~d~d~-~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 84 ELFVFDIPCESLEEISVEFLVLDSER-GSRNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp EEEEEECCSSSSTTEEEEEEEEECCT-TSCCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred ceEEEECCHHHhCceEEEEEEEeCCC-CCCCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 67888876542 23 89998774 46677999999999872 233334445553
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=81.13 E-value=9.7 Score=27.63 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=40.6
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEe-cccccc-ceeeeeeeecCC--CccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVK-LQPLET-KCTIHDAYDLMD--GRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vk-L~~Let-~ceI~e~~~l~d--GRK~tGGklEV~vRlR 74 (96)
+.|.|.+.... +. |+||.... +.+|.++|.|.+. |.++.. ..+...-.+|.. +.....|.|.+.+...
T Consensus 72 e~f~f~v~~~~l~~~~L~~~V~d~d~-~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~ 148 (296)
T 1dqv_A 72 ETFQFSVPLAELAQRKLHFSVYDFDR-FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL 148 (296)
T ss_dssp EEEEEECCGGGGSSCCCEEEEEECCS-SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE
T ss_pred eEEEEEecHHHhcCCEEEEEEEEcCC-CCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec
Confidence 57888886432 23 99998765 5667899999995 444433 223333455553 2333346666655543
No 46
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=75.41 E-value=8.8 Score=26.80 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=40.5
Q ss_pred eEEEEEeecccce-eEEEeccccccCCceeEEEEEeccccccce-----eeeeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS-LSFSTSRGFFRSDTLVGTVNVKLQPLETKC-----TIHDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~-fev~~kggffrsd~~vGta~vkL~~Let~c-----eI~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
..|-.++..++.- +.|+|+.- ..|+-|.|.++.|...| ...--++| +|. |||-+.|++-
T Consensus 60 e~Fd~~V~~Gr~l~i~Vfh~a~-----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL----eP~-Gkl~~~i~~~ 124 (126)
T 1yrk_A 60 STFDAHIYEGRVIQIVLMRAAE-----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL----QPQ-AKVLMSVQYF 124 (126)
T ss_dssp CEEEEECCTTCEEEEEEEEETT-----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC----BSS-CEEEEEEEEE
T ss_pred ceEEeeeeCCEEEEEEEEcCCC-----CeeeEEEEEHHHHHhhhccCCCceEEEEec----ccC-cEEEEEEEEe
Confidence 3566666666322 77777655 79999999999999877 22223444 555 8888888763
No 47
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=73.93 E-value=9.2 Score=33.09 Aligned_cols=51 Identities=10% Similarity=0.176 Sum_probs=40.3
Q ss_pred eEEEEEeecccce---eEEEeccccccCCceeEEEEEeccccccceeeeeeeecCC
Q psy17735 6 LVLMLPLSHNHQS---LSFSTSRGFFRSDTLVGTVNVKLQPLETKCTIHDAYDLMD 58 (96)
Q Consensus 6 ~~f~~~I~R~~R~---fev~~kggffrsd~~vGta~vkL~~Let~ceI~e~~~l~d 58 (96)
..|.|.+...... |+||.+..+- |..+|.|.++|..|.........++|..
T Consensus 73 EtF~F~v~~~~~~~L~~~V~D~D~~~--ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 73 ETFEFILDPNQENVLEITLMDANYVM--DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EEEEEEECTTSCCBCEEEEEECCSSS--CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred eEEEEEecCCCCCEEEEEEEECCCCC--CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 6788888763323 9999987654 8899999999999987776777778754
No 48
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=70.98 E-value=8.4 Score=27.34 Aligned_cols=59 Identities=15% Similarity=0.228 Sum_probs=41.0
Q ss_pred eEEEEEeecccce-eEEEeccccccCCceeEEEEEeccccccce-----eeeeeeecCCCccccCceEEEEEEee
Q psy17735 6 LVLMLPLSHNHQS-LSFSTSRGFFRSDTLVGTVNVKLQPLETKC-----TIHDAYDLMDGRKTLGGKLEVKIRIR 74 (96)
Q Consensus 6 ~~f~~~I~R~~R~-fev~~kggffrsd~~vGta~vkL~~Let~c-----eI~e~~~l~dGRK~tGGklEV~vRlR 74 (96)
..|-.++..++.- +.|+|+.- ..|+-|.|.++.|...| ...--++| +|. |||-+.|++-
T Consensus 65 e~Fd~~V~~Gr~l~i~Vfh~a~-----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL----eP~-Gkl~v~i~~~ 129 (138)
T 2enj_A 65 STFDAHINKGRVMQIIVKGKNV-----DLISETTVELYSLAERCRKNNGKTEIWLEL----KPQ-GRMLMNARYF 129 (138)
T ss_dssp SEEEECCCSSCEEEEEEECSSC-----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC----BSS-CEEEEEEEEC
T ss_pred ceEeeeEECCeEEEEEEEcCCC-----CeeeEEEEEHHHHHhhhccCCCceEEEEec----ccC-cEEEEEEEEE
Confidence 3466666655322 66776554 79999999999999887 22223455 565 9999999985
No 49
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=63.93 E-value=15 Score=25.95 Aligned_cols=38 Identities=8% Similarity=0.112 Sum_probs=28.4
Q ss_pred eEEEEEeeccc---ce--eEEEeccccccCCceeEEEEEecccc
Q psy17735 6 LVLMLPLSHNH---QS--LSFSTSRGFFRSDTLVGTVNVKLQPL 44 (96)
Q Consensus 6 ~~f~~~I~R~~---R~--fev~~kggffrsd~~vGta~vkL~~L 44 (96)
..|.|.+.... +. |+||.... +.+|.++|.|.+.|..+
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~-~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDK-IGKNDAIGKVFVGYNST 246 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCS-SSCCCEEEEEEEETTCC
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCC-CCCCcEEEEEEECCCCC
Confidence 56788876542 22 88998765 56788999999999764
No 50
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=36.48 E-value=6.9 Score=30.33 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=14.1
Q ss_pred ccCceEEEEEEeeCCCCccce
Q psy17735 62 TLGGKLEVKIRIRNPIVSKQL 82 (96)
Q Consensus 62 ~tGGklEV~vRlRePL~~~~~ 82 (96)
+..+.+.|.||+| |+...|.
T Consensus 8 ~~~~~i~V~vRvR-P~~~~E~ 27 (344)
T 4a14_A 8 AEEAPVRVALRVR-PLLPKEL 27 (344)
T ss_dssp -CCCCCEEEEEEC-CCCHHHH
T ss_pred ccccceEEEEEec-ccchHHH
Confidence 3468899999999 5555443
No 51
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=34.99 E-value=14 Score=28.86 Aligned_cols=17 Identities=29% Similarity=0.542 Sum_probs=10.6
Q ss_pred CceEEEEEEeeCCCCccc
Q psy17735 64 GGKLEVKIRIRNPIVSKQ 81 (96)
Q Consensus 64 GGklEV~vRlRePL~~~~ 81 (96)
.|.+.|.||+| |+..+|
T Consensus 9 ~~~i~V~vRvR-P~~~~E 25 (355)
T 3lre_A 9 CHHMKVVVRVR-PENTKE 25 (355)
T ss_dssp ---CEEEEEEC-CCCHHH
T ss_pred cCCCEEEEEeC-cCChHH
Confidence 48899999999 455444
No 52
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=31.32 E-value=19 Score=28.87 Aligned_cols=14 Identities=43% Similarity=0.686 Sum_probs=12.0
Q ss_pred CCccccCceEEEEE
Q psy17735 58 DGRKTLGGKLEVKI 71 (96)
Q Consensus 58 dGRK~tGGklEV~v 71 (96)
-|+|++||++||-+
T Consensus 71 ~G~k~tG~~iEvll 84 (345)
T 1wdi_A 71 LARKPTGGKVEILL 84 (345)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEcCCCCeEEEEE
Confidence 48999999999865
No 53
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=27.90 E-value=20 Score=28.82 Aligned_cols=15 Identities=27% Similarity=0.432 Sum_probs=9.7
Q ss_pred CCccccCceEEEEEE
Q psy17735 58 DGRKTLGGKLEVKIR 72 (96)
Q Consensus 58 dGRK~tGGklEV~vR 72 (96)
-|+|++||++||-+=
T Consensus 81 ~G~k~tG~~iEvlLl 95 (347)
T 1vky_A 81 YARKKTGASIEILLI 95 (347)
T ss_dssp EEBC---CCEEEEEE
T ss_pred EEEcCCCCeEEEEEe
Confidence 389999999999764
No 54
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=22.81 E-value=14 Score=28.85 Aligned_cols=17 Identities=24% Similarity=0.304 Sum_probs=10.2
Q ss_pred cccCceEEEEEEeeCCC
Q psy17735 61 KTLGGKLEVKIRIRNPI 77 (96)
Q Consensus 61 K~tGGklEV~vRlRePL 77 (96)
.+-+|.+.|.||+|.+.
T Consensus 4 ~~~~~~i~V~vRvRP~~ 20 (359)
T 1x88_A 4 EEKGKNIQVVVRCRPFN 20 (359)
T ss_dssp -----CCEEEEEECCCC
T ss_pred CCCCCCeEEEEEeCCCC
Confidence 34578999999999554
No 55
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=21.63 E-value=18 Score=28.25 Aligned_cols=15 Identities=20% Similarity=0.231 Sum_probs=12.0
Q ss_pred cCceEEEEEEeeCCC
Q psy17735 63 LGGKLEVKIRIRNPI 77 (96)
Q Consensus 63 tGGklEV~vRlRePL 77 (96)
.+|.+.|.||+|.+.
T Consensus 4 ~~~~i~V~vRvRP~~ 18 (355)
T 1goj_A 4 SANSIKVVARFRPQN 18 (355)
T ss_dssp SSCBCEEEEEECCCC
T ss_pred CCCCeEEEEECCCCC
Confidence 368999999999554
No 56
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=21.22 E-value=19 Score=28.91 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=13.0
Q ss_pred CceEEEEEEeeCCCCccc
Q psy17735 64 GGKLEVKIRIRNPIVSKQ 81 (96)
Q Consensus 64 GGklEV~vRlRePL~~~~ 81 (96)
.+.+.|.||+| |+...|
T Consensus 70 ~~~I~V~vRvR-Pl~~~E 86 (410)
T 1v8k_A 70 EHRICVCVRKR-PLNKQE 86 (410)
T ss_dssp CCCEEEEEEEC-CCCHHH
T ss_pred CCCeEEEEEeC-CCChhH
Confidence 68999999999 554443
No 57
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=20.08 E-value=20 Score=28.03 Aligned_cols=17 Identities=18% Similarity=0.456 Sum_probs=11.8
Q ss_pred CceEEEEEEeeCCCCccc
Q psy17735 64 GGKLEVKIRIRNPIVSKQ 81 (96)
Q Consensus 64 GGklEV~vRlRePL~~~~ 81 (96)
.+.+.|.||+|. +...|
T Consensus 3 ~~~i~V~vRvRP-~~~~E 19 (350)
T 2vvg_A 3 SDNIKVIVRCRP-LNARE 19 (350)
T ss_dssp -CBCEEEEEECC-CCHHH
T ss_pred CCCeEEEEEeCC-CChhh
Confidence 478999999994 44433
Done!