RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17740
(384 letters)
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 63.0 bits (153), Expect = 1e-13
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 276 FKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
+ +++ ++ F C + GC + F R + H +TH ++
Sbjct: 2 LPRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 41.8 bits (98), Expect = 2e-06
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
+ FEC + C K + + ++++H++TH +R
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 33.0 bits (75), Expect = 0.004
Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 311 LSRHKRTHTGEKKFGCSIC--NRRFMRSDHLAKHVKRHSKD 349
+ ++ + +K F C + F R ++ H++ H +D
Sbjct: 7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 62.5 bits (152), Expect = 1e-13
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
R + C CG+ FS S +LS+H+RTHTGE
Sbjct: 3 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE 38
Score = 50.5 bits (121), Expect = 2e-09
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
R + +++ C C + F S L+KH + H+
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 39.4 bits (92), Expect = 2e-05
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
++C+ CGK++ SS L H RTHTGE
Sbjct: 13 YKCD--ECGKSFSHSSDLSKHRRTHTGE 38
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 61.3 bits (149), Expect = 3e-13
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQW 298
F C CGK++ HLK HM+ H+ R ++C++
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 53.6 bits (129), Expect = 2e-10
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
F C CG+ F+ L H + H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 26.2 bits (58), Expect = 0.73
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 326 CSICNRRFMRSDHLAKHVKRHS 347
C + F HL +H+K HS
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHS 27
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 57.6 bits (140), Expect = 4e-12
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
H+GE+P+ C CG+ FSRS L +H+R HTGE
Sbjct: 2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE 33
Score = 44.5 bits (106), Expect = 2e-07
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
H+GEK +GC C + F RS L +H + H+
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 44.1 bits (105), Expect = 3e-07
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
+ C CGK + +SS L H R HTGE
Sbjct: 8 YGCVE--CGKAFSRSSILVQHQRVHTGE 33
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 57.4 bits (138), Expect = 9e-12
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
++ + CQ CG+ F+ + RH H G + +GC +C ++F HL H+K H
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 52.4 bits (125), Expect = 6e-10
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTH 318
+ C CGK++ S HM H G RP+ C CG++F L H + H
Sbjct: 4 YPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 55.8 bits (135), Expect = 2e-11
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+RP+ C GC + F R+ +L RHK++H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 47.7 bits (114), Expect = 1e-08
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
R + C++ C K + ++ L H ++H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 35.4 bits (82), Expect = 4e-04
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 321 EKKFGCSI--CNRRFMRSDHLAKHVKRHSK 348
++ + C C++ F+R+ L +H K H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 55.8 bits (135), Expect = 2e-11
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
RPF+C W+ CG+RF+RSDEL RHKRTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 52.7 bits (127), Expect = 3e-10
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
F C + CGK + +S L+ H RTHTGE+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 28.1 bits (63), Expect = 0.16
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
+ F C+ C +RF RSD L +H + H+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHT 28
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 55.9 bits (135), Expect = 2e-11
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
R TG +PF C C R FSRSD L+ H++ H
Sbjct: 2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36
Score = 49.7 bits (119), Expect = 3e-09
Identities = 19/33 (57%), Positives = 20/33 (60%)
Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
R TG K F C C+R F RSDHLA H KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 34.3 bits (79), Expect = 0.001
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
F+C +C +++ +S HL H + H
Sbjct: 12 FQCP--DCDRSFSRSDHLALHRKRHML 36
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 55.8 bits (135), Expect = 2e-11
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
RTHTGE+P+ C C + F + L H + +
Sbjct: 1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN 35
Score = 47.4 bits (113), Expect = 2e-08
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
RTHTGEK + CS C++ F + L H KR+
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 38.1 bits (89), Expect = 5e-05
Identities = 5/28 (17%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
+ C++ C K + + L H + +
Sbjct: 9 YACSH--CDKTFRQKQLLDMHFKRYHDP 34
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 53.5 bits (129), Expect = 1e-10
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHT 319
RP++C + GC ++F++S L H TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 49.7 bits (119), Expect = 3e-09
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHT 289
R + C ++ C K + +S++LK+H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 33.9 bits (78), Expect = 0.001
Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
+ + C CN++F +S +L H+ H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 53.5 bits (129), Expect = 1e-10
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+P C + GC + +SR + L H R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 53.5 bits (129), Expect = 2e-10
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
+C +E C K+Y + +LK H+R+HTGE
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 27.3 bits (61), Expect = 0.29
Identities = 7/28 (25%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
K C+ C + + R ++L H++ H+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 52.7 bits (127), Expect = 3e-10
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGE 321
RTH+GE+P+ C C RF++S + H + HT
Sbjct: 1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35
Score = 50.4 bits (121), Expect = 2e-09
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
RTH+GEK + C IC+ RF +S + H+ +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 34.2 bits (79), Expect = 0.001
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 264 FECNYENCGKNYFKSSHLKAH-MRTHTGE 291
+EC C + +S +K H ++ HT
Sbjct: 9 YECYI--CHARFTQSGTMKMHILQKHTEN 35
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 52.3 bits (126), Expect = 3e-10
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
RP+ C C RRFSRS +L+RH R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 51.2 bits (123), Expect = 1e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
+ C E+C + + +S+ L H+R HTG
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 28.8 bits (65), Expect = 0.067
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
+ + C + C+RRF RS L +H++ H+
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 50.1 bits (120), Expect = 2e-09
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+PF C + GCG+RFS L H R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 48.9 bits (117), Expect = 6e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
F+C +E CGK + +L+ H+R HTG+
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 25.0 bits (55), Expect = 1.6
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
K F C+ C +RF +L HV+ H+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 49.2 bits (118), Expect = 5e-09
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 289 TGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEKKFGCSI 328
+ +P++CQ CG+ FSR D L+ H K+ HT E+ C +
Sbjct: 1 SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 47.3 bits (113), Expect = 2e-08
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 264 FECNYENCGKNYFKSSHLKAHMR-THTGERPFLCQ 297
+ C CGK + + HL H++ HT ERP CQ
Sbjct: 6 YICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.4 bits (77), Expect = 0.002
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 319 TGEKKFGCSICNRRFMRSDHLAKHVKRH 346
+ K + C C + F R DHL H+K+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQV 28
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 49.0 bits (117), Expect = 6e-09
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+G+RPF C F+ +RH + HT
Sbjct: 2 SSGKRPF--VCRICLSAFTTKANCARHLKVHTDT 33
Score = 40.9 bits (96), Expect = 5e-06
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
+G++ F C IC F + A+H+K H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 35.1 bits (81), Expect = 5e-04
Identities = 4/26 (15%), Positives = 9/26 (34%)
Query: 266 CNYENCGKNYFKSSHLKAHMRTHTGE 291
C + ++ H++ HT
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 48.8 bits (117), Expect = 6e-09
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
R F+C+ C R F+R + L RH R+HT EK
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 46.1 bits (110), Expect = 6e-08
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
F C C + + + HLK H R+HT E+
Sbjct: 3 FVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 33.0 bits (76), Expect = 0.002
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
+ F C +C R F R +HL +H + H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 47.7 bits (114), Expect = 2e-08
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
+ F C C +RF RSD LS+H +TH +K
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 44.3 bits (105), Expect = 2e-07
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
F C C K + +S HL H++TH ++
Sbjct: 3 FACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 33.5 bits (77), Expect = 0.002
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
KKF C C +RFMRSDHL+KH+K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQ 26
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 45.7 bits (109), Expect = 8e-08
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
++PF C+ C R FSRSD L+ H RTHTG
Sbjct: 1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 41.4 bits (98), Expect = 2e-06
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
F+C C +N+ +S HL H+RTHTG
Sbjct: 4 FQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 35.7 bits (83), Expect = 2e-04
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHS 347
+K F C IC R F RSDHL H++ H+
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 39.8 bits (93), Expect = 1e-05
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTH 318
E+PF C CGR+F+RSDE RH + H
Sbjct: 1 EKPFACDI--CGRKFARSDERKRHTKIH 26
Score = 36.0 bits (83), Expect = 2e-04
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHSK 348
EK F C IC R+F RSD +H K H +
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 39.1 bits (91), Expect = 2e-05
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG 325
++PFLC GCG+RF+ D L+ HK H KFG
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38
Score = 31.8 bits (72), Expect = 0.007
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 321 EKKFGCSI--CNRRFMRSDHLAKHVKRH 346
+K F C+ C +RF DHLA H +H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
Score = 24.1 bits (52), Expect = 5.4
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHT 289
+ F C CG+ + HL H H
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 35.3 bits (82), Expect = 4e-04
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHT 319
+P+ C CG+ FS++ L H+R HT
Sbjct: 1 KPYKCLE--CGKAFSQNSGLINHQRIHT 26
Score = 34.9 bits (81), Expect = 5e-04
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHT 289
++C CGK + ++S L H R HT
Sbjct: 3 YKCL--ECGKAFSQNSGLINHQRIHT 26
Score = 26.4 bits (59), Expect = 0.46
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
K + C C + F ++ L H + H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 35.0 bits (80), Expect = 5e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+PF C+ GC + F+ L+RH THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 32.7 bits (74), Expect = 0.003
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
+ F C E C K + HL H THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 35.0 bits (80), Expect = 5e-04
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHSKDGAIT 353
EK + C +C RF R D ++ HV+ H DG++
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH--DGSVG 31
Score = 30.8 bits (69), Expect = 0.017
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
E+P+ C CG RF R D +S H R+H G
Sbjct: 1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG 28
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 33.4 bits (76), Expect = 0.002
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
+ + C++ +CG Y K+ L+AH+ HTGE
Sbjct: 2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
Score = 28.4 bits (63), Expect = 0.10
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
+ ++C + CG ++++ +L H HTGE
Sbjct: 2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 33.2 bits (76), Expect = 0.002
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 264 FECNYENCGKNY--FKSSH-LKAHMRTHTGE 291
F C++ C + FK+ + L HMR HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 31.6 bits (72), Expect = 0.008
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 294 FLCQWTGCGRR---FSRSDELSRHKRTHTGE 321
F+C W GC R F L H R HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 33.2 bits (75), Expect = 0.002
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 263 IFECNYENCGKNYFKSSHLKAHMRTHT 289
++ C++ENCGK + K + LK H +HT
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHT 27
Score = 29.3 bits (65), Expect = 0.049
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHT 319
++C + CG+ F + ++L H+ +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 31.6 bits (71), Expect = 0.008
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTH 318
+ P+ C GC +RFS L RH++ H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 27.0 bits (59), Expect = 0.31
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTH 288
+EC +E C K + S LK H + H
Sbjct: 4 YECPHEGCDKRFSLPSRLKRHEKVH 28
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 31.2 bits (71), Expect = 0.012
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHSKDGA 351
+ + CS C R F + L H+ H +D A
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 33
Score = 30.1 bits (68), Expect = 0.032
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
R + C++ C + + + L HM H +R
Sbjct: 4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR 32
Score = 24.3 bits (53), Expect = 4.0
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 301 CGRRFSRSDELSRHKRTHTGEK 322
C R F + L H H ++
Sbjct: 11 CKREFRSAQALGGHMNVHRRDR 32
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 31.0 bits (70), Expect = 0.012
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRH-KRTHTGE 321
+P++C+ GC + FS + + ++H RTH+ E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
Score = 24.9 bits (54), Expect = 1.8
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 262 RIFECNYENCGKNYFKSS-HLKAHMRTHTGE 291
+ + C +E C K + +S K RTH+ E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 30.9 bits (70), Expect = 0.012
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 324 FGCSICNRRFMRSDHLAKHV-KRHS 347
+ C +CNR F R D L +H K HS
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHS 26
Score = 30.9 bits (70), Expect = 0.014
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 293 PFLCQWTGCGRRFSRSDELSRH-KRTHTG 320
P+ C C R F+R D L RH ++ H+G
Sbjct: 1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.1 bits (70), Expect = 0.012
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 271 CGKNYFKSSHLKAHMRTHTGE 291
CGK + +SS LK H HTGE
Sbjct: 8 CGKAFVESSKLKRHQLVHTGE 28
Score = 30.0 bits (67), Expect = 0.026
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 301 CGRRFSRSDELSRHKRTHTGE 321
CG+ F S +L RH+ HTGE
Sbjct: 8 CGKAFVESSKLKRHQLVHTGE 28
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 30.6 bits (69), Expect = 0.016
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
+ C C K Y S L+ H++T G
Sbjct: 3 YVCKLPGCTKRYTDPSSLRKHVKTVHG 29
Score = 28.3 bits (63), Expect = 0.10
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
+P++C+ GC +R++ L +H +T G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 30.8 bits (69), Expect = 0.017
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 269 ENCGKNYFKSSHLKAHMRTHTGERPF 294
E CGK + HL H +H+GE+P+
Sbjct: 9 EICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 29.6 bits (66), Expect = 0.040
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 301 CGRRFSRSDELSRHKRTHTGEKKF 324
CG+ F L+RHK +H+GEK +
Sbjct: 11 CGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 24.3 bits (52), Expect = 4.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
K+ C IC + F HL +H HS
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHS 29
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 30.2 bits (68), Expect = 0.021
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 266 CNYENCGKNYFKSSHLKAHMRTHTGER 292
C CG K S LK H+RTHT R
Sbjct: 4 CEE--CGIRAKKPSMLKKHIRTHTDVR 28
Score = 26.4 bits (58), Expect = 0.49
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
++C+ CG R + L +H RTHT +
Sbjct: 2 YICEE--CGIRAKKPSMLKKHIRTHTDVR 28
Score = 24.4 bits (53), Expect = 3.0
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 323 KFGCSICNRRFMRSDHLAKHVKRHS 347
K+ C C R + L KH++ H+
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHT 25
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 30.1 bits (67), Expect = 0.035
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 319 TGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG 350
TG K + C+IC +RFM D +HV +K
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSY 32
Score = 25.1 bits (54), Expect = 2.1
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 289 TGERPFLCQWTGCGRRFSRSDELSRHKRTH 318
TG +P+ C C +RF D RH T
Sbjct: 1 TGIKPYEC--NICAKRFMWRDSFHRH-VTS 27
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.9 bits (64), Expect = 0.065
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
ERPF CQ C S +L+ H R+HTG+
Sbjct: 1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD 29
Score = 25.8 bits (56), Expect = 0.94
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD 349
E+ F C IC S L H++ H+ D
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 23.8 bits (51), Expect = 4.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
R F+C C SS L H+R+HTG+
Sbjct: 2 RPFKCQI--CPYASRNSSQLTVHLRSHTGD 29
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.5 bits (63), Expect = 0.090
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 301 CGRRFSRSDELSRHKRTHTG 320
CG+ FSR D+L H R HTG
Sbjct: 7 CGKCFSRKDKLKTHMRCHTG 26
Score = 27.0 bits (59), Expect = 0.39
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 269 ENCGKNYFKSSHLKAHMRTHTG 290
E CGK + + LK HMR HTG
Sbjct: 5 EVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 2.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 326 CSICNRRFMRSDHLAKHVKRHS 347
C +C + F R D L H++ H+
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHT 25
>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 32
Score = 27.1 bits (60), Expect = 0.31
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 296 CQWTGCGRRFSRSDELSRH 314
C+W GC + F ++L H
Sbjct: 4 CRWDGCSQEFDSQEQLVHH 22
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 26.6 bits (58), Expect = 0.50
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 271 CGKNYFKSSHLKAHMRTHTGER 292
C K + +LK H R HTGE+
Sbjct: 6 CHKKFLSKYYLKVHNRKHTGEK 27
>d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate
(Paramecium caudatum) [TaxId: 5885]}
Length = 116
Score = 27.6 bits (61), Expect = 1.2
Identities = 6/46 (13%), Positives = 11/46 (23%), Gaps = 6/46 (13%)
Query: 279 SHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF 324
+ FLC G ++ + H +F
Sbjct: 39 PNQTNKTAA------FLCAALGGPNAWTGRNLKEVHANMGVSNAQF 78
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 25.4 bits (55), Expect = 1.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKR 316
C + GCGR FS L+ HK+
Sbjct: 1 MPCDFPGCGRIFSNRQYLNHHKK 23
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 24.7 bits (53), Expect = 2.3
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
E+ F C + C F R EL H +HTGE
Sbjct: 2 EQVFTC--SVCQETFRRRMELRLHMVSHTGE 30
Score = 24.7 bits (53), Expect = 2.7
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
++F C+ C + + + L+ HM +HTGE
Sbjct: 3 QVFTCSV--CQETFRRRMELRLHMVSHTGE 30
Score = 24.3 bits (52), Expect = 3.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHS 347
E+ F CS+C F R L H+ H+
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHT 28
>d1k28a3 d.2.1.3 (A:130-345) Tail-associated lysozyme gp5,
catalytic domain {Bacteriophage T4 [TaxId: 10665]}
Length = 216
Score = 27.3 bits (60), Expect = 2.9
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 22 VIMKVNKDGTCIPDPFGIREMKPKQIKDISLKKML 56
VI N D PD + E+ ++S+ +ML
Sbjct: 17 VIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEML 51
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312
{Thermotoga maritima [TaxId: 2336]}
Length = 181
Score = 26.4 bits (57), Expect = 4.2
Identities = 11/104 (10%), Positives = 29/104 (27%), Gaps = 3/104 (2%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRS-DELSRHKRTHTGEK 322
+E E+ + + + C + S + + +
Sbjct: 59 YEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSE 118
Query: 323 KFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRN 366
K N R + + +G +++G+P L++
Sbjct: 119 KTVYIAENFRENSYQKEFEDFYQVVAEGKP--NDLGSPVQALKD 160
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.9 bits (51), Expect = 4.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 301 CGRRFSRSDELSRHKRTH 318
C R F LSRH+R H
Sbjct: 6 CERSFVEKSALSRHQRVH 23
Score = 23.5 bits (50), Expect = 5.8
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
+ C +C R F+ L++H + H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.8 bits (51), Expect = 4.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 324 FGCSICNRRFMRSDHLAKHVK 344
+ C C + F R D++ HVK
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVK 22
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 344
Score = 26.4 bits (57), Expect = 5.6
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 4/117 (3%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
RI + ++ GK Y + + + + H G R F S+ + + + GE
Sbjct: 84 RIAKGTFKVDGKEYHLAINKEPNSL-HGGVRGFDKVLWTPRV---LSNGVQFSRISPDGE 139
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNL 378
+ + + D V ++ TP N+ S + N+ +
Sbjct: 140 EGYPGELKVWVTYTLDGGELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEV 196
>d1rw2a_ a.118.19.1 (A:) C-terminal domain of Ku80 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 152
Score = 25.5 bits (56), Expect = 6.7
Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 53 KKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVE----------SKDTNRD 102
K + ++ R++ ++ + E+ N LK+L+ K+ ++ F E +K+
Sbjct: 76 KSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASG 135
Query: 103 KETSEEAAN 111
+ E A
Sbjct: 136 SSVTAEEAK 144
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.0 bits (49), Expect = 9.1
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 266 CNYENCGKNYFKSSHLKAHMRTH 288
C ++ C K + +S ++ H+ TH
Sbjct: 4 CPHKGCTKMFRDNSAMRKHLHTH 26
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 23.1 bits (49), Expect = 9.4
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTG 320
F+C + CG+ F+R + ++RH G
Sbjct: 5 FVC--SKCGKTFTRRNTMARHADNCAG 29
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.129 0.387
Gapped
Lambda K H
0.267 0.0526 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,365,800
Number of extensions: 62413
Number of successful extensions: 292
Number of sequences better than 10.0: 1
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 124
Length of query: 384
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 297
Effective length of database: 1,213,086
Effective search space: 360286542
Effective search space used: 360286542
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.0 bits)