Query psy17744
Match_columns 326
No_of_seqs 94 out of 96
Neff 3.3
Searched_HMMs 13730
Date Fri Aug 16 21:50:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17744.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17744hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u0ma2 c.95.1.2 (A:202-349) P 70.0 5.2 0.00038 31.2 6.6 72 229-303 31-118 (148)
2 d1qqga1 b.55.1.2 (A:12-114) In 61.4 1.8 0.00013 30.2 1.9 19 204-222 85-103 (103)
3 d1hnja2 c.95.1.2 (A:175-317) K 51.6 9.4 0.00069 29.4 4.9 62 243-304 43-117 (143)
4 d2c6ya1 a.4.5.14 (A:1-98) Inte 35.8 7.1 0.00052 29.4 1.7 23 146-168 59-81 (98)
5 d1okja1 c.55.1.9 (A:1-106) Hyp 33.9 14 0.001 27.1 3.2 49 244-294 35-97 (106)
6 d1d5va_ a.4.5.14 (A:) Adipocyt 30.8 16 0.0012 27.2 3.0 27 146-172 60-86 (94)
7 d1mzja2 c.95.1.2 (A:184-336) P 28.8 35 0.0026 26.3 5.0 62 243-304 47-122 (153)
8 d1u6ea2 c.95.1.2 (A:175-317) K 24.9 18 0.0013 27.9 2.4 62 243-304 47-122 (148)
9 d1kiya_ a.128.1.5 (A:) Trichod 20.4 45 0.0033 29.9 4.5 44 266-309 4-54 (354)
10 d1v61a_ b.55.1.1 (A:) Rac/CDC4 20.3 27 0.002 25.7 2.6 25 204-228 107-131 (132)
No 1
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=70.04 E-value=5.2 Score=31.21 Aligned_cols=72 Identities=17% Similarity=0.245 Sum_probs=54.2
Q ss_pred ceeecCCCCChHHHHHhhhHHHHHHhhhcCCCCCCCCC-----CHHHHHHHHHhhcCCCCCCC-----------hhhHHH
Q psy17744 229 SVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDC-----DLTTYIDLMAAILDIPRFES-----------RIETLH 292 (326)
Q Consensus 229 tV~Ys~~MPDId~LMQeWP~e~Ee~L~~~~lP~a~lD~-----~L~eYvdiiC~iLDIPV~~s-----------~IeSLH 292 (326)
.++-++..|. +++.+++.|+++|.+.++...++|+ .=...++.+|..|+||..+- ..-|-.
T Consensus 31 ~~~l~~~~p~---~i~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sas 107 (148)
T d1u0ma2 31 HFLLDKRVPA---TMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAV 107 (148)
T ss_dssp EEEECTTTGG---GHHHHHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHH
T ss_pred EEEEecccch---HHHHHHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcch
Confidence 3455566664 4688999999999999999999998 44567899999999987541 223446
Q ss_pred HHHHHHHHHhh
Q psy17744 293 VIFSLYAAIQS 303 (326)
Q Consensus 293 vLFsLY~efkn 303 (326)
++|.|...++.
T Consensus 108 i~~~L~~~~~~ 118 (148)
T d1u0ma2 108 VLDALRRLFDE 118 (148)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHc
Confidence 77888776654
No 2
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.38 E-value=1.8 Score=30.22 Aligned_cols=19 Identities=26% Similarity=0.543 Sum_probs=17.1
Q ss_pred hhhcHHHHHHHHHHHHHHh
Q psy17744 204 ADKNKKAIDRWIKDIGDLH 222 (326)
Q Consensus 204 aeknpk~Id~WI~sI~eLH 222 (326)
.+.+.++.+.||+.|.+||
T Consensus 85 ~A~s~~e~~~Wi~al~~l~ 103 (103)
T d1qqga1 85 AADSEAEQDSWYQALLQLH 103 (103)
T ss_dssp ECSSHHHHHHHHHHHHHHC
T ss_pred EcCCHHHHHHHHHHHHhhC
Confidence 4568899999999999998
No 3
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=51.61 E-value=9.4 Score=29.36 Aligned_cols=62 Identities=19% Similarity=0.183 Sum_probs=47.8
Q ss_pred HHhhhHHHHHHhhhcCCCCCCCCC-----CHHHHHHHHHhhcCCCCCCC--------hhhHHHHHHHHHHHHhhC
Q psy17744 243 MQEWSNDVEQTISEVGLPPEDLDC-----DLTTYIDLMAAILDIPRFES--------RIETLHVIFSLYAAIQSS 304 (326)
Q Consensus 243 MQeWP~e~Ee~L~~~~lP~a~lD~-----~L~eYvdiiC~iLDIPV~~s--------~IeSLHvLFsLY~efkns 304 (326)
...||+.++++|++.++...++|+ .=...++.+|..|+||..+. ..-|-.+.++|....++.
T Consensus 43 v~~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~ 117 (143)
T d1hnja2 43 VTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDG 117 (143)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhC
Confidence 357899999999999999999998 33568889999999987421 334666777777766654
No 4
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.78 E-value=7.1 Score=29.41 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=18.1
Q ss_pred ccceeeeCCCCCCcccCCeeecC
Q psy17744 146 DAFIKVARPDGRPDSLGLTVLDE 168 (326)
Q Consensus 146 DaFiKVpRPDg~~d~LGL~vLDE 168 (326)
+.|+||||+-+....=+++.||+
T Consensus 59 ~~F~kv~r~~~~~gKg~~W~l~p 81 (98)
T d2c6ya1 59 RYFIKVPRSQEEPGKGSFWRIDP 81 (98)
T ss_dssp TTEEEECCCTTSCCSSCEEEECH
T ss_pred cceEeccCCCCCCCCCceEEECc
Confidence 57999999876666677888874
No 5
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=33.93 E-value=14 Score=27.07 Aligned_cols=49 Identities=16% Similarity=0.161 Sum_probs=37.9
Q ss_pred HhhhHHHHHHhhhcCCCCCCCCC--------------CHHHHHHHHHhhcCCCCCCChhhHHHHH
Q psy17744 244 QEWSNDVEQTISEVGLPPEDLDC--------------DLTTYIDLMAAILDIPRFESRIETLHVI 294 (326)
Q Consensus 244 QeWP~e~Ee~L~~~~lP~a~lD~--------------~L~eYvdiiC~iLDIPV~~s~IeSLHvL 294 (326)
+.+++.++++|++.++.-.++|. -=-.+++-+|-.++||++. |-+|.+|
T Consensus 35 ~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfTglRig~s~akgla~~~~ip~~~--v~sl~~l 97 (106)
T d1okja1 35 QRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIG--VSTLMTM 97 (106)
T ss_dssp TTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEE--EEHHHHH
T ss_pred HHHHHHHHHHHHhcCCcceeeeEEEEeeccCccccchHHHHHHHHHHHHcCCCEEE--eCHHHHH
Confidence 35777899999999988888887 2346889999999999975 3445444
No 6
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.79 E-value=16 Score=27.19 Aligned_cols=27 Identities=30% Similarity=0.549 Sum_probs=21.1
Q ss_pred ccceeeeCCCCCCcccCCeeecCCCCC
Q psy17744 146 DAFIKVARPDGRPDSLGLTVLDEPCFE 172 (326)
Q Consensus 146 DaFiKVpRPDg~~d~LGL~vLDEP~~~ 172 (326)
.+|+||||+.+.+-+=+++.||+=+..
T Consensus 60 ~~F~kv~~~~~~~gkg~~W~l~p~~~~ 86 (94)
T d1d5va_ 60 ECFVKVPRDDKKPGKGSYWTLDPDSYN 86 (94)
T ss_dssp SSEEECCCCTTSCSCCCCEEECCSCSS
T ss_pred ceEEEcCcCCCCCCCCceEEECccHHH
Confidence 689999999887666678888875543
No 7
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=28.84 E-value=35 Score=26.28 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=46.0
Q ss_pred HHhhhHHHHHHhhhcCCCCCCCCC-----CHHHHHHHHHhhcCCCCCC--C-hhh------HHHHHHHHHHHHhhC
Q psy17744 243 MQEWSNDVEQTISEVGLPPEDLDC-----DLTTYIDLMAAILDIPRFE--S-RIE------TLHVIFSLYAAIQSS 304 (326)
Q Consensus 243 MQeWP~e~Ee~L~~~~lP~a~lD~-----~L~eYvdiiC~iLDIPV~~--s-~Ie------SLHvLFsLY~efkns 304 (326)
....|..++++|++.++-.+++|. .=...++.+|..|+||-.+ + .++ |=.+.++|...+++.
T Consensus 47 v~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~~ 122 (153)
T d1mzja2 47 VADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 122 (153)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHcC
Confidence 578899999999999999999997 3356788899999998754 1 122 235667776666654
No 8
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.93 E-value=18 Score=27.94 Aligned_cols=62 Identities=11% Similarity=0.211 Sum_probs=46.1
Q ss_pred HHhhhHHHHHHhhhcCCCCCCCCC-----CHHHHHHHHHhhcCCCCCCCh---hh------HHHHHHHHHHHHhhC
Q psy17744 243 MQEWSNDVEQTISEVGLPPEDLDC-----DLTTYIDLMAAILDIPRFESR---IE------TLHVIFSLYAAIQSS 304 (326)
Q Consensus 243 MQeWP~e~Ee~L~~~~lP~a~lD~-----~L~eYvdiiC~iLDIPV~~s~---Ie------SLHvLFsLY~efkns 304 (326)
+..=|+.++++|.+.++..+++|+ .=...++-+|..|+||..+.. ++ |-.++++|-..+++.
T Consensus 47 ~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~g 122 (148)
T d1u6ea2 47 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 122 (148)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHcC
Confidence 556688899999999999999998 336788999999999875422 22 334667776666653
No 9
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]}
Probab=20.36 E-value=45 Score=29.89 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHhhcC-CCCCC------ChhhHHHHHHHHHHHHhhCcchhc
Q psy17744 266 CDLTTYIDLMAAILD-IPRFE------SRIETLHVIFSLYAAIQSSSNQNA 309 (326)
Q Consensus 266 ~~L~eYvdiiC~iLD-IPV~~------s~IeSLHvLFsLY~efknsqhF~~ 309 (326)
.+.++|+.++|.+|| |++++ .+|++|+-..+.=..--..||-+.
T Consensus 4 ~~~~~~~~~~~~fl~~i~y~~~~~~~e~~~e~~~~~~~~~~~~~~~~~~~~ 54 (354)
T d1kiya_ 4 FPTEYFLNTTVRLLEYIRYRDSNYTREERIENLHYAYNKAAHHFAQPRQQQ 54 (354)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHhcchhhHh
Confidence 467899999999999 98875 379998865554444334555543
No 10
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.35 E-value=27 Score=25.72 Aligned_cols=25 Identities=20% Similarity=0.557 Sum_probs=20.6
Q ss_pred hhhcHHHHHHHHHHHHHHhhCCCCC
Q psy17744 204 ADKNKKAIDRWIKDIGDLHKNKPPP 228 (326)
Q Consensus 204 aeknpk~Id~WI~sI~eLHrsKPp~ 228 (326)
.++|+++-++||+.|+++-++-|++
T Consensus 107 ~a~s~eek~~Wv~~L~~~i~~~~~~ 131 (132)
T d1v61a_ 107 HCNNNQDFQEWMEQLNRLTKSGPSS 131 (132)
T ss_dssp CCCCSHHHHHHHHHHHHHHTTSCSC
T ss_pred EcCCHHHHHHHHHHHHHHHhcCCCC
Confidence 3578899999999999998776653
Done!