Your job contains 1 sequence.
>psy17746
IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE
AEGFCYRMYSEEDFRRMNKNTVPEIQRTNLASTALTLLSLEINAATFDFMDKPPKEIESR
QLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP
TS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17746
(182 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 347 1.4e-42 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 339 2.1e-42 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 347 3.7e-42 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 349 6.8e-42 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 347 8.0e-42 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 307 5.7e-36 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 297 8.5e-35 2
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 296 2.0e-34 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 269 2.8e-34 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 291 4.7e-33 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 283 7.3e-33 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 281 9.8e-33 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 288 1.9e-32 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 288 1.9e-32 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 274 1.1e-31 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 272 1.1e-31 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 272 1.4e-31 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 268 1.7e-31 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 271 1.8e-31 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 272 1.9e-31 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 280 4.6e-31 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 258 4.7e-31 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 267 4.9e-31 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 279 6.9e-31 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 279 6.9e-31 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 268 7.9e-31 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 261 9.7e-31 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 261 9.7e-31 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 274 1.2e-30 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 280 2.0e-30 2
UNIPROTKB|B4DVG8 - symbol:DHX38 "Uncharacterized protein"... 262 3.3e-30 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 278 3.5e-30 2
UNIPROTKB|Q05BE5 - symbol:DHX33 "DEAH (Asp-Glu-Ala-His) b... 228 6.0e-30 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 261 6.5e-30 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 270 6.7e-30 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 261 1.0e-29 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 261 1.1e-29 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 261 1.1e-29 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 261 1.1e-29 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 261 1.1e-29 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 335 1.4e-29 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 262 1.6e-29 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 251 1.9e-29 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 265 2.0e-29 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 270 4.5e-29 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 274 5.8e-29 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 272 6.4e-29 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 262 7.1e-29 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 262 7.1e-29 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 262 7.1e-29 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 262 7.1e-29 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 250 7.4e-29 2
WB|WBGene00020263 - symbol:T05E8.3 species:6239 "Caenorha... 258 1.0e-28 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 237 1.1e-28 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 270 1.2e-28 2
UNIPROTKB|E1C9C2 - symbol:DHX37 "Uncharacterized protein"... 232 1.3e-28 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 261 1.9e-28 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 267 2.2e-28 2
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 244 2.4e-28 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 247 2.5e-28 2
RGD|1307239 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box po... 216 4.0e-28 2
GENEDB_PFALCIPARUM|PF08_0042 - symbol:PF08_0042 "ATP-depe... 263 7.2e-28 2
UNIPROTKB|Q8IB47 - symbol:PF08_0042 "ATP-dependent RNA he... 263 7.2e-28 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 319 1.0e-27 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 250 1.1e-27 2
UNIPROTKB|E1BNQ2 - symbol:DHX37 "Uncharacterized protein"... 224 1.2e-27 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 241 1.9e-27 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 247 2.6e-27 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 247 2.6e-27 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 249 4.7e-27 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 237 4.9e-27 2
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 257 5.7e-27 2
UNIPROTKB|E2RHZ3 - symbol:DHX37 "Uncharacterized protein"... 220 6.6e-27 2
UNIPROTKB|F5H3Y4 - symbol:DHX37 "Probable ATP-dependent R... 219 8.4e-27 2
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 257 9.4e-27 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 249 9.8e-27 2
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 248 1.0e-26 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 243 1.3e-26 2
RGD|1306837 - symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box po... 220 1.4e-26 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 240 1.4e-26 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 240 1.4e-26 2
UNIPROTKB|Q8IY37 - symbol:DHX37 "Probable ATP-dependent R... 219 1.4e-26 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 312 1.5e-26 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 312 1.5e-26 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 261 2.1e-26 2
MGI|MGI:1914737 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) bo... 255 3.1e-26 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 307 4.9e-26 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 307 5.0e-26 1
RGD|1359618 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box po... 253 5.1e-26 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 307 5.2e-26 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 307 5.2e-26 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 307 5.2e-26 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 307 5.2e-26 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 307 5.2e-26 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 307 5.3e-26 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 307 5.4e-26 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 307 5.4e-26 1
UNIPROTKB|C9JR60 - symbol:DHX40 "Probable ATP-dependent R... 250 7.4e-26 2
UNIPROTKB|C9JEW8 - symbol:DHX40 "Probable ATP-dependent R... 250 8.6e-26 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 225 1.1e-25 2
WARNING: Descriptions of 192 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 347 (127.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 65/121 (53%), Positives = 88/121 (72%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETSIT+ GIKYV+D+G+VK K ++P +GL+VL V +S+ QAWQRTGRAGRE
Sbjct: 260 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRE 319
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEIE 118
G CYR+Y+E++F + +K TVPEIQR N ++ N TFDFM KP P I+
Sbjct: 320 DSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQ 379
Query: 119 S 119
+
Sbjct: 380 A 380
Score = 132 (51.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++TELL T++CYM+ L VID W+ E P Y
Sbjct: 555 DTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEY 607
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 339 (124.4 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATNIAETSIT+ GIKYV+D+G+VK K ++P +GL+VL V +S+ QAWQR GRAGRE
Sbjct: 259 VIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGRAGRE 318
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEIE 118
G CYR+Y+E +F + K TVPEIQR N ++ N TFDFM KP P ++
Sbjct: 319 DSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSKPSPDHMQ 378
Query: 119 S 119
+
Sbjct: 379 A 379
Score = 139 (54.0 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+SRQ V+IHPSS+L P +++TELL TS+CYM+ L V+ W+ E P Y
Sbjct: 554 DSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYEAAPDY 606
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 347 (127.2 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 65/121 (53%), Positives = 88/121 (72%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETSIT+ GIKYV+D+G+VK K ++P +GL+VL V +S+ QAWQRTGRAGRE
Sbjct: 350 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRE 409
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEIE 118
G CYR+Y+E++F + +K TVPEIQR N ++ N TFDFM KP P I+
Sbjct: 410 DSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQ 469
Query: 119 S 119
+
Sbjct: 470 A 470
Score = 132 (51.5 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++TELL T++CYM+ L VID W+ E P Y
Sbjct: 645 DTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEY 697
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 349 (127.9 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 66/121 (54%), Positives = 87/121 (71%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETSIT+ GIKYV+D+G+VK K ++P +GL+VL V +S+ QAWQRTGRAGRE
Sbjct: 341 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRE 400
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEIE 118
G CYR+Y+E++F + K TVPEIQR N ++ N TFDFM KP P IE
Sbjct: 401 DSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIE 460
Query: 119 S 119
+
Sbjct: 461 A 461
Score = 127 (49.8 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++T LL T++CYM+ L V+D W+ E P Y
Sbjct: 636 DTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDY 688
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 347 (127.2 bits), Expect = 8.0e-42, Sum P(2) = 8.0e-42
Identities = 66/121 (54%), Positives = 87/121 (71%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETSIT+ GIKYV+D+G+VK K ++P +GL+VL V +S+ QAWQRTGRAGRE
Sbjct: 357 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRE 416
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEIE 118
G CYR+Y+E++F + K TVPEIQR N +I N TFDFM KP P I+
Sbjct: 417 DSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQ 476
Query: 119 S 119
+
Sbjct: 477 A 477
Score = 129 (50.5 bits), Expect = 8.0e-42, Sum P(2) = 8.0e-42
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++TELL TS+CYM+ L V+D W+ E P +
Sbjct: 652 DTHQPVAIHPSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDF 704
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 307 (113.1 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 65/127 (51%), Positives = 85/127 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GIKYV+D G K K+++P TG++ L VT IS+A A QRTGRAGR
Sbjct: 674 VVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRT 733
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE-- 116
+ G CYR+Y+ ++ + NTVPEIQRTN I N FDFMD PP E
Sbjct: 734 SPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEAL 793
Query: 117 IESRQLV 123
I+S +L+
Sbjct: 794 IKSLELL 800
Score = 121 (47.7 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQH 174
+ ++ Q V IHP+S L+ LP ++++ +L+ TS+ YM+ ++ + P W+ E+ P Y Q
Sbjct: 966 RTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYY-QL 1024
Query: 175 RIVTDPTS 182
+ V D TS
Sbjct: 1025 KDVEDATS 1032
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 297 (109.6 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 60/127 (47%), Positives = 85/127 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GIKYV+D G K K+++P TG++ L +T IS+A A QR GRAGR
Sbjct: 674 VVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRT 733
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE-- 116
+ G CYR+Y+ ++ + +NTVPE+QRTN I+ FDFMD PP E
Sbjct: 734 SPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEAL 793
Query: 117 IESRQLV 123
++S +L+
Sbjct: 794 VKSLELL 800
Score = 120 (47.3 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQH 174
+ ++ Q V IHP+S L+ LP ++++ EL+ TS+ YM+ ++ + P W+ E+ P Y Q
Sbjct: 966 RTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYY-QL 1024
Query: 175 RIVTDPTS 182
+ V D S
Sbjct: 1025 KDVEDAAS 1032
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 296 (109.3 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 61/116 (52%), Positives = 77/116 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETSIT+PGI+ VID G VK+K+ + GLDVL+ IS+AQAWQR GRAGR+
Sbjct: 343 VILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRD 402
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDKPPKE 116
A+G CYR Y++ + T PEI RTN +I+ FDF+D PP E
Sbjct: 403 ADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNNFDFLD-PPLE 457
Score = 111 (44.1 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 125 IHPSSSLAGSL-PEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
IHPSS L G P YILFTE++QT + +++ ++ I WI E+VP
Sbjct: 642 IHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 269 (99.8 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 58/115 (50%), Positives = 74/115 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETSIT+ GI YV+D G VK + G+D L+VT IS+AQA QR+GRAGR
Sbjct: 610 VILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRT 669
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKP 113
G CYR+Y+E+ + + M NT+PEIQR N I+ F+FMD P
Sbjct: 670 GPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPP 724
Score = 143 (55.4 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
K + LV +HPSSSL G P+Y+++ LL TS+ YM +S+IDP W+ E+ P Y
Sbjct: 900 KTLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKY 955
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 291 (107.5 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 61/117 (52%), Positives = 77/117 (65%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI YVID+G K K ++P G+D LQVT IS+A A QR+GRAGR
Sbjct: 930 IIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTG 989
Query: 62 EGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+E F+ + N +PEIQRTN + N FDFMD PP++
Sbjct: 990 PGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQD 1046
Score = 113 (44.8 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTD 179
+HP+S+L G P+YI++ EL+ TS+ YM+ ++ +DP W+ EM P + + + + D
Sbjct: 1229 LHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLKD 1285
Score = 34 (17.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 17 IKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRT 54
IKY+ D L+++ + P LD + ++I +A +R+
Sbjct: 752 IKYMTDGILLRESFNDPN--LD--KYSAIIMDEAHERS 785
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 283 (104.7 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 63/133 (47%), Positives = 78/133 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++ ATNIAETSIT+ GI YV+D G K ++ G++ L V+ ISQAQA QR GRAGR
Sbjct: 753 VVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRT 812
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E F M +NTVPEIQR N IN FDFMD PPK +
Sbjct: 813 GPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLM 872
Query: 119 SRQLVSIHPSSSL 131
L ++ SL
Sbjct: 873 LNALTELYHLQSL 885
Score = 117 (46.2 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
K I V IHPSSSL G EY+++ ++ TSR YM ++ I+P W+ E+ P +
Sbjct: 1043 KTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHF 1098
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 281 (104.0 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 60/127 (47%), Positives = 80/127 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATNIAETS+TV GI +V+DSG K K ++P G+D LQ+T ISQA A QR+GRAGR
Sbjct: 457 VIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRT 516
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIE 118
G YR+Y+E ++ M T+PEIQRT+ + + FDFMD PP+E
Sbjct: 517 GPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETI 576
Query: 119 SRQLVSI 125
S L +
Sbjct: 577 STSLFEL 583
Score = 115 (45.5 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 19/46 (41%), Positives = 35/46 (76%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEM 166
+++HP+S+L G +PEY+++ EL+ TS+ YM T++ +DP W+ E+
Sbjct: 756 MALHPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAEL 801
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 288 (106.4 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 61/118 (51%), Positives = 78/118 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETS+T+ GIKYVID+G K K ++ G+DVLQVT ISQA A QR+GRAGR
Sbjct: 798 IIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRT 857
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+E F + +N +PEIQR+N + N FDF+D P KE
Sbjct: 858 GAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKE 915
Score = 108 (43.1 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+Y+++ E++ T++ YM+ ++ +DP W+ E+ P
Sbjct: 1098 VHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGP 1143
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 288 (106.4 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 61/118 (51%), Positives = 78/118 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETS+T+ GIKYVID+G K K ++ G+DVLQVT ISQA A QR+GRAGR
Sbjct: 798 IIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRT 857
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+E F + +N +PEIQR+N + N FDF+D P KE
Sbjct: 858 GAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKE 915
Score = 108 (43.1 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+Y+++ E++ T++ YM+ ++ +DP W+ E+ P
Sbjct: 1098 VHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGP 1143
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 274 (101.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 57/126 (45%), Positives = 80/126 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI YV+D+G K K ++P G+D LQ+T ISQA A QR+GRAGR
Sbjct: 573 IVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTG 632
Query: 62 EGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G +R+++E+ F+ + T+PEIQRTN + + FDFMD PP++ +
Sbjct: 633 PGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMT 692
Query: 120 RQLVSI 125
L +
Sbjct: 693 TSLFDL 698
Score = 113 (44.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEM 166
V +HP+S+L G LP+Y+++ EL+ TS+ YM T++ +DP W+ ++
Sbjct: 870 VQLHPTSALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADL 915
Score = 35 (17.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 17 IKYVIDSGLVKQKTHHP 33
IKY+ D L+++ + P
Sbjct: 396 IKYMTDGVLLRESLNEP 412
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 272 (100.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 55/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GR GR
Sbjct: 307 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRS 366
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I N F FM PP +
Sbjct: 367 RSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 423
Score = 109 (43.4 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
NAA F + I + IHP+S L A P ++++ E++QTS+ YM+ ++ I+ A
Sbjct: 586 NAARFHSTGAY-RTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 644
Query: 162 WITEMVPGYAAQ 173
W+ E+ P + Q
Sbjct: 645 WLLELAPHFYQQ 656
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 272 (100.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 55/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GR GR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRS 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I N F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454
Score = 109 (43.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
NAA F + I + IHP+S L A P ++++ E++QTS+ YM+ ++ I+ A
Sbjct: 617 NAARFHSTGAY-RTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 675
Query: 162 WITEMVPGYAAQ 173
W+ E+ P + Q
Sbjct: 676 WLLELAPHFYQQ 687
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 268 (99.4 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETSIT+ G+ +VID VK + ++P T ++ L VT IS+A A QR GRAGR
Sbjct: 328 VVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRN 387
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y+EEDF ++ ++TVPE+QR+N I N F F+ PP +
Sbjct: 388 RAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQ 444
Score = 112 (44.5 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 20/57 (35%), Positives = 38/57 (66%)
Query: 118 ESRQLVSIHPSSSLAGSLP-EYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
+ R+L IHP S L G P ++++F E++QTS+ YM+ ++ ++ +W+ E+ P + Q
Sbjct: 622 DDRELY-IHPDSVLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQ 677
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 271 (100.5 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 55/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GR GR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRS 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I N F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454
Score = 109 (43.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
NAA F + I + IHP+S L A P ++++ E++QTS+ YM+ ++ I+ A
Sbjct: 617 NAARFHSTGAY-RTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 675
Query: 162 WITEMVPGYAAQ 173
W+ E+ P + Q
Sbjct: 676 WLLELAPHFYQQ 687
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 272 (100.8 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GRAGR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRS 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+E+ F ++ ++TVPE+QR+N I N F FM PP +
Sbjct: 398 RSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454
Score = 108 (43.1 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 125 IHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
IHP+S L A P ++++ E++QTS+ YM+ ++ I+ AW+ E+ P + Q
Sbjct: 638 IHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQ 687
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 280 (103.6 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 59/117 (50%), Positives = 77/117 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II+ATNIAETS+T+ GI+YVID G K K ++P GLD L +T IS+A A QR+GRAGR
Sbjct: 634 IIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRT 693
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN--AATFDFMDKPP 114
A G YR+Y+E+ F+ M T+PEIQRTN ++ + F F+DKPP
Sbjct: 694 APGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPP 750
Score = 102 (41.0 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITE 165
V +HP+S+L G LP Y+++ ELL TS+ Y+ ++ +DP W+ E
Sbjct: 933 VQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLME 977
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 258 (95.9 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 57/118 (48%), Positives = 71/118 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETS+T+ I YVID G KQ + TG++ L V IS+A A QR GRAGR
Sbjct: 523 VILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRT 582
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + NTVPEIQR N IN FDF+D PP E
Sbjct: 583 APGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHE 640
Score = 122 (48.0 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
K I+ Q V IHP+SSL LP ++L+ EL+ TS+ YM+ + I+ W+ E+ P Y
Sbjct: 814 KTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHY 869
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 267 (99.0 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 53/117 (45%), Positives = 75/117 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G +K + ++P T ++ L V +SQA A QR GR GR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRN 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I++ F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQ 454
Score = 109 (43.4 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
NAA F + I + IHP+S L A P ++++ E++QTS+ YM+ ++ I+ A
Sbjct: 617 NAARFHSTGAY-RTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 675
Query: 162 WITEMVPGYAAQ 173
W+ E+ P + Q
Sbjct: 676 WLLELAPHFYQQ 687
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 279 (103.3 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 58/117 (49%), Positives = 75/117 (64%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VID G K K ++P G+D L + +SQA A QRTGRAGR
Sbjct: 712 IVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTG 771
Query: 62 EGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G CYR+Y+E F+ + K+TVPEIQRTN ++ F FMD PP++
Sbjct: 772 PGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Score = 102 (41.0 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 16/46 (34%), Positives = 33/46 (71%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+S+L G +P+Y+++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1011 LHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGP 1056
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 279 (103.3 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 58/117 (49%), Positives = 75/117 (64%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VID G K K ++P G+D L + +SQA A QRTGRAGR
Sbjct: 712 IVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTG 771
Query: 62 EGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G CYR+Y+E F+ + K+TVPEIQRTN ++ F FMD PP++
Sbjct: 772 PGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Score = 102 (41.0 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 16/46 (34%), Positives = 33/46 (71%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+S+L G +P+Y+++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1011 LHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGP 1056
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 268 (99.4 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +S+A A QR GRAGR
Sbjct: 338 VIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRN 397
Query: 61 AEGFCYRMYS--EEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+ EEDF ++ ++TVPE+QR+N I N F F+ PP +
Sbjct: 398 RSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQ 456
Score = 106 (42.4 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSL-AGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
NAA F + I + IHP+S L A P ++++ E++QT++ YM+ ++ I+ A
Sbjct: 619 NAAKFHSTGAY-RTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESA 677
Query: 162 WITEMVPGYAAQ 173
W+ E+ P + Q
Sbjct: 678 WLVELAPHFYQQ 689
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 261 (96.9 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 189 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 248
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 249 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 306
Score = 108 (43.1 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 479 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 534
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 261 (96.9 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 189 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 248
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 249 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 306
Score = 108 (43.1 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 479 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 534
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 274 (101.5 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 60/118 (50%), Positives = 76/118 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YVID G KQK+++ TG++ L VT S+A A QR GRAGR
Sbjct: 683 VVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRV 742
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ F+ M + TVPEIQRTN IN FDFMD PP E
Sbjct: 743 AAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHE 800
Score = 104 (41.7 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
K ++ +Q V +HP+SSL P ++++ EL+ T++ +M+ + I+ W+ E+ P Y
Sbjct: 973 KTVKHQQTVYVHPNSSLFEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHY 1028
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 280 (103.6 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 58/118 (49%), Positives = 76/118 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+TV GI YV+D+G K K ++ G+D LQVT ISQA A QR GRAGR
Sbjct: 761 VVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRT 820
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G YR+Y+E + R M + T+PEIQRTN + + FDFMD+PP +
Sbjct: 821 GPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPND 878
Score = 97 (39.2 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITE 165
+H +SSL G LP+Y+++ EL+ TS+ YM ++ +DP W+ E
Sbjct: 1060 LHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAE 1102
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 262 (97.3 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 114 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 173
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 174 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 230
Score = 101 (40.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 413 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 458
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 278 (102.9 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 58/118 (49%), Positives = 76/118 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI YVID G KQK +P TG++ L +T +S+A A QR GRAGR
Sbjct: 737 VVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRV 796
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
A G C+R+++ F + +NT+PEIQRTN IN FDFMD PP +
Sbjct: 797 APGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQ 854
Score = 96 (38.9 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 121 QLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
Q V IHPSS L S P+++++ EL+ T++ +M+ + I +W+ E+ P
Sbjct: 1034 QSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAP 1081
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 228 (85.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 35 TGLDVLQVTSISQAQAWQRTGRAGREAEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXX 94
+GL+VL V +S+ QAWQRTGRAGRE G CYR+Y+E++F + +K TVPEIQR N
Sbjct: 160 SGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVM 219
Query: 95 XXXXXXEI-NAATFDFMDKP-PKEIES 119
++ N TFDFM KP P I++
Sbjct: 220 LQLLAMKVPNVLTFDFMSKPSPDHIQA 246
Score = 132 (51.5 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++TELL T++CYM+ L VID W+ E P Y
Sbjct: 421 DTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEY 473
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 261 (96.9 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 671 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 730
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 731 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 788
Score = 110 (43.8 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQH 174
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 961 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAK 1020
Query: 175 RIVTDPTS 182
+ DP S
Sbjct: 1021 EL-EDPHS 1027
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 270 (100.1 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 58/117 (49%), Positives = 73/117 (62%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +V+DSG K K +P G+D LQV ISQA A QR GRAGR
Sbjct: 833 IVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTG 892
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y++ F+ M T+PEIQRTN + + F FMD PP++
Sbjct: 893 PGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPED 949
Score = 103 (41.3 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPG-YAAQH 174
+HP+S+L G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P Y+ +H
Sbjct: 1132 LHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKH 1184
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 261 (96.9 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 670 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 729
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 730 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 787
Score = 108 (43.1 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 960 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 1015
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 261 (96.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 673 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 732
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 733 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 790
Score = 108 (43.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 963 RTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 1018
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 261 (96.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 674 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 733
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 734 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Score = 108 (43.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 1019
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 261 (96.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 674 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 733
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 734 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Score = 108 (43.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 1019
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 261 (96.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G KQK+++P TG++ L VT S+A A QR GRAGR
Sbjct: 674 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 733
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
A G C+R+Y+ ++ + + TVPEIQRT+ I+ FDF+D PP E
Sbjct: 734 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Score = 108 (43.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+ ++ +Q V IHP+SSL P ++L+ EL+ T++ +M+ + I+ +W+ E+ P Y
Sbjct: 964 RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY 1019
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 335 (123.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 87/124 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+IL+TNIAETSIT+ GIKYV+D+G+VK K ++P GL+VL V +S+AQAWQRTGRAGRE
Sbjct: 300 VILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGRE 359
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQ---RTNXXXXXXXXXXXEI-NAATFDFMDKP-PK 115
G CYR+Y+E++F + +K TVPEIQ R N I N TFDFM KP P
Sbjct: 360 DSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPD 419
Query: 116 EIES 119
I++
Sbjct: 420 AIQA 423
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 102 INAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPA 161
+NAA D + S QLV+IHPSS L P +++ LL T++CYM+ L V+D
Sbjct: 583 MNAAELQ-PDGTYSTVNSHQLVAIHPSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVDAE 641
Query: 162 WITEMVPGY 170
W+ + P Y
Sbjct: 642 WLYDAAPDY 650
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 262 (97.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 341 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 400
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 401 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 457
Score = 101 (40.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 640 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 685
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 251 (93.4 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 54/128 (42%), Positives = 78/128 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ GI YV+D G KQK ++P ++ L V+ IS+A A QR GRAGR
Sbjct: 354 VVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRT 413
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+EE FR+ + + T PEI R+N I+ FD+MD P E
Sbjct: 414 RPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETM 473
Query: 119 SRQLVSIH 126
R L ++
Sbjct: 474 MRALEELN 481
Score = 111 (44.1 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 17/54 (31%), Positives = 37/54 (68%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q+VS+HPS L+ + PE++++ E + T++ +++ ++ I P W+ E+ P Y
Sbjct: 651 MKDNQVVSLHPSCGLSVT-PEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNY 703
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 265 (98.3 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 56/118 (47%), Positives = 74/118 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI YVID G VK+ ++P TG+ L V S+A A QR+GRAGR
Sbjct: 644 VVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRV 703
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G C+R+Y++ + M ++T PEIQRTN IN F+FMD PP E
Sbjct: 704 GPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTE 761
Score = 101 (40.6 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDP 160
NAA + +++ V IHPSS + P +++ EL+QT++ YM++ I+P
Sbjct: 927 NAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEP 986
Query: 161 AWITEMVPGY 170
W+ E+ P +
Sbjct: 987 KWLAELAPHF 996
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 270 (100.1 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GRAGR
Sbjct: 330 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRS 389
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ + TVPE+QR+N I N F FM PP +
Sbjct: 390 RSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 446
Score = 87 (35.7 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 103 NAATFDFMDKPPKEI-ESRQLVSIHPSSSLAGSLPEY----ILFTELLQTSRCYMKTLSV 157
NAA F + + S + +H + + G+ Y +++ E++QTS+ YM+ ++
Sbjct: 609 NAARFHSTGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVTA 668
Query: 158 IDPAWITEMVPGYAAQ 173
I+ AW+ E+ P + Q
Sbjct: 669 IESAWLLELAPHFYQQ 684
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 274 (101.5 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 58/120 (48%), Positives = 77/120 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+TV GIKYVID GLVK K ++P G+D LQV IS A A QR+GRAGR
Sbjct: 643 VVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRT 702
Query: 61 AEGFCYRMYSEEDFR--RMNKNTVPEIQRTNXXXXXXXXXXXEINAA-TFDFMDKPPKEI 117
G YR+Y+E+ M +PEIQR+N ++N +F F+D PPK++
Sbjct: 703 GAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDL 762
Score = 88 (36.0 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
+HP+SSL S Y+++ EL+ T + YM ++ +DP W+ E GY
Sbjct: 959 LHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIWLLEY--GY 1004
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 272 (100.8 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 55/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GR GR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRS 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I N F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454
Score = 83 (34.3 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 139 ILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
+++ E++QTS+ YM+ ++ I+ AW+ E+ P + Q
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQ 663
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 262 (97.3 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 801 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 860
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 861 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 917
Score = 101 (40.6 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1100 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1145
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 262 (97.3 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 861
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 862 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 918
Score = 101 (40.6 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1101 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1146
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 262 (97.3 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 861
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 862 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 918
Score = 101 (40.6 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1101 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1146
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 262 (97.3 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K +P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 803 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 862
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C+R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 863 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 919
Score = 101 (40.6 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1102 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1147
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 250 (93.1 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 54/128 (42%), Positives = 78/128 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETS+T+ GI YV+D G KQK ++P ++ L V+ IS+A A QR GRAGR
Sbjct: 375 VIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRT 434
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+EE F++ + + + PEI R+N I+ FDFMD P E
Sbjct: 435 RPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETM 494
Query: 119 SRQLVSIH 126
R L ++
Sbjct: 495 MRALEELN 502
Score = 107 (42.7 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V IHPS+ L+ E++++ E + TS+ Y++T++V+ P W+ E+ P Y
Sbjct: 678 VKDNQDVLIHPSTVLSKE-GEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKY 730
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 258 (95.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETS+T+PGI+ VIDSG VK K +DVL+V ++S+AQA QR GRAGR+
Sbjct: 442 VIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRD 501
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTN 89
A G CYR+YS EDF + +PEI R N
Sbjct: 502 APGKCYRLYSREDFHKFEAENMPEILRCN 530
Score = 99 (39.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 102 INAATFDFM-DKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDP 160
+N+ +D D+ I + IHPSS L+ S P YI+F+EL++T+ + +++ID
Sbjct: 753 LNSCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDG 812
Query: 161 AWITEMV 167
W+ ++
Sbjct: 813 DWVRPLI 819
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 237 (88.5 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 51/117 (43%), Positives = 68/117 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETSIT+PGI YVID G VK K ++P T D L + +S+A A QR GRAGR
Sbjct: 321 VVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRM 380
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G YR+Y++ D+ + PE++R+ I N FDF PP +
Sbjct: 381 RPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQ 437
Score = 117 (46.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPE--YILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAA 172
++I S ++IHP+S+L +LP+ Y+++ ELLQT++ +M ++VI W+TE+ P Y
Sbjct: 614 RQISSGTELAIHPNSTLY-TLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQ 672
Query: 173 Q 173
Q
Sbjct: 673 Q 673
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 270 (100.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G VK + ++P T ++ L V +SQA A QR GRAGR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRS 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+Y+EE F ++ + TVPE+QR+N I N F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454
Score = 83 (34.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 139 ILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
+++ E++QTS+ YM+ ++ I+ AW+ E+ P + Q
Sbjct: 652 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQ 686
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 232 (86.7 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 51/116 (43%), Positives = 65/116 (56%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT ISQA A QR GRAGR
Sbjct: 606 VVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTE 665
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAA-TFDFMDKPPKE 116
G CYR+YS F K + PEI + I F F PP E
Sbjct: 666 PGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTE 721
Score = 128 (50.1 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
V IHPSS L LPE++++ E+++T++ YMK +S ++P WI ++P Y
Sbjct: 953 VFIHPSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 261 (96.9 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 56/117 (47%), Positives = 74/117 (63%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATNIAETS+TV GI YVIDSG K K ++P G+D LQ+ ISQA A QR+GRAGR
Sbjct: 804 VVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTG 863
Query: 62 EGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G YR+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 864 PGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQD 920
Score = 98 (39.6 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+S+L G+ P+Y+++ EL+ T++ YM+ + +D W+ E+ P
Sbjct: 1103 LHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGP 1148
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 267 (99.0 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 53/117 (45%), Positives = 75/117 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATN+AETSIT+ GI YVID G +K + ++P T ++ L V +SQA A QR GR GR
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRN 397
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G CYR+Y+EE F ++ ++TVPE+QR+N I++ F FM PP +
Sbjct: 398 RSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQ 454
Score = 83 (34.3 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 139 ILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
+++ E++QTS+ YM+ ++ I+ AW+ E+ P + Q
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQ 663
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 244 (91.0 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 55/119 (46%), Positives = 72/119 (60%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I++TNIAETS+TV G+ YVIDSG VKQ+ ++P +G+ L V IS+ QA QR GRAGR
Sbjct: 277 IVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTR 336
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXE---INAATFDFMDKPPKE 116
G CYR+Y +R T+PEIQRT+ + I+ FDF+D P E
Sbjct: 337 PGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSE 395
Score = 107 (42.7 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 121 QLVSIHPSSSLA----GSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
QLV +HPSS L+ G +P Y+++ EL+ T+R +M+ + +D AW+
Sbjct: 590 QLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWV 636
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 247 (92.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 53/128 (41%), Positives = 78/128 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ GI YV+D G KQK ++P ++ L V+ IS+A A QR GRAGR
Sbjct: 372 VVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRT 431
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+EE F++ + + + PEI R+N I+ FDFMD P E
Sbjct: 432 RPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETM 491
Query: 119 SRQLVSIH 126
R L ++
Sbjct: 492 MRALEELN 499
Score = 105 (42.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V IHPS+ L G E++++ E + TS+ Y++T++ + P W+ E+ P Y
Sbjct: 673 VKDNQDVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAY 725
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 216 (81.1 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 42/87 (48%), Positives = 55/87 (63%)
Query: 35 TGLDVLQVTSISQAQAWQRTGRAGREAEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXX 94
+GL+VL V +S+ QAWQRTGRAGRE G CYR+Y+E++F + K PEIQR N
Sbjct: 152 SGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFDKFEKMAAPEIQRCNLASVM 211
Query: 95 XXXXXXEI-NAATFDFMDKP-PKEIES 119
++ N TFDFM +P P IE+
Sbjct: 212 LQLLAMKVPNVLTFDFMSRPSPDHIEA 238
Score = 127 (49.8 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q V+IHPSS L P +++T LL T++CYM+ L V+D W+ E P Y
Sbjct: 413 DTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDY 465
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 263 (97.6 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+IL+TNIAETS+T+P IKYVIDSG VK K G +VL+VT IS+ A QR+GRAGRE
Sbjct: 428 VILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGRE 487
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEI 117
A G YR+Y++E++ MN +PEI R++ IN F+F + P KE+
Sbjct: 488 APGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKEL 545
Score = 86 (35.3 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 123 VSIHPSSSLAGSL--PEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
+ IHPSS+L S P +I +++++QT R Y + ++ I+ W+ + V
Sbjct: 812 IRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYV 858
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 263 (97.6 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+IL+TNIAETS+T+P IKYVIDSG VK K G +VL+VT IS+ A QR+GRAGRE
Sbjct: 428 VILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGRE 487
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEI 117
A G YR+Y++E++ MN +PEI R++ IN F+F + P KE+
Sbjct: 488 APGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKEL 545
Score = 86 (35.3 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 123 VSIHPSSSLAGSL--PEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
+ IHPSS+L S P +I +++++QT R Y + ++ I+ W+ + V
Sbjct: 812 IRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYV 858
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 319 (117.4 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 71/158 (44%), Positives = 98/158 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETS+T+ GI+YV+DSG VK K +P G+D L + IS+A A QRTGRAGRE
Sbjct: 358 VILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGRE 417
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPP--KEI 117
EG CYR+Y++E F +++ +++PEI+R+N IN +FDF++ PP I
Sbjct: 418 FEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVI 477
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTL 155
+S +L+ + S GSL E L Y KTL
Sbjct: 478 KSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTL 515
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 250 (93.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 54/124 (43%), Positives = 76/124 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L V+ IS+A A QR+GRAGR
Sbjct: 350 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRT 409
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ F+ M NT PEI R+N I+ FDFMD P E
Sbjct: 410 RPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETL 469
Query: 119 SRQL 122
R L
Sbjct: 470 MRAL 473
Score = 95 (38.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
I+ Q V +HPS+ L P+++++ E + T++ Y++T++ + P W+ + P Y
Sbjct: 646 IKDNQNVQLHPSTCLDHK-PDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQY 698
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 224 (83.9 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT +SQA A QR GRAGR
Sbjct: 615 VVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTE 674
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F K PEI R
Sbjct: 675 PGHCYRLYSSAVFGDFEKYPPPEITR 700
Score = 127 (49.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP 180
V IHPSS L LPE++++ E+++T++ YMK +S +D WI ++P Y + + +P
Sbjct: 962 VFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEEP 1019
Score = 35 (17.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 103 NAATF-DFMDKPPKEIESR 120
++A F DF PP EI R
Sbjct: 683 SSAVFGDFEKYPPPEITRR 701
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 241 (89.9 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 56/132 (42%), Positives = 77/132 (58%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+T+ GI YV+D G KQK ++ ++ L VT IS+A A QR GRAGR
Sbjct: 389 IVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTR 448
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIES 119
G C+R+Y+E F++ + + T PEI R+N ++ FDFMD P E
Sbjct: 449 PGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMM 508
Query: 120 RQLVSIHPSSSL 131
R L ++ S L
Sbjct: 509 RALEELNYLSCL 520
Score = 103 (41.3 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
I+ Q V +HPSS L E++L+ E + TS+ Y++T++ I P W+ ++ P Y
Sbjct: 689 IKDNQNVMLHPSSVLTTDY-EWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNY 741
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 247 (92.0 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 52/118 (44%), Positives = 73/118 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI YVID G KQ + +G++ L V +IS+A A QR GRAGR
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRT 695
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G C+R+Y+ ++ + + +PEIQRTN I+ FDF+D PP+E
Sbjct: 696 GPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQE 753
Score = 99 (39.9 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQH 174
K ++ + HP+S L P ++++ EL+ TS+ +M+ +S I+ W+ E+ P Y +
Sbjct: 926 KTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY-KG 984
Query: 175 RIVTDPTS 182
R + D T+
Sbjct: 985 RELEDATN 992
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 247 (92.0 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 52/118 (44%), Positives = 73/118 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI YVID G KQ + +G++ L V +IS+A A QR GRAGR
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRT 695
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G C+R+Y+ ++ + + +PEIQRTN I+ FDF+D PP+E
Sbjct: 696 GPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQE 753
Score = 99 (39.9 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQH 174
K ++ + HP+S L P ++++ EL+ TS+ +M+ +S I+ W+ E+ P Y +
Sbjct: 926 KTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY-KG 984
Query: 175 RIVTDPTS 182
R + D T+
Sbjct: 985 RELEDATN 992
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 249 (92.7 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 55/124 (44%), Positives = 74/124 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+++TNIAETS+T+ GI YVID G KQK ++P ++ L V+ IS+A A QR+GRAGR
Sbjct: 344 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRT 403
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ F + T PEI R+N I+ FDFMD P E
Sbjct: 404 RPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 463
Query: 119 SRQL 122
R L
Sbjct: 464 MRAL 467
Score = 90 (36.7 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q+V +HPS+ L PE++++ E + TSR +++T++ I W+ ++ Y
Sbjct: 640 VKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHY 692
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 237 (88.5 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 53/128 (41%), Positives = 75/128 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I++TNIAETS+T+ GI YV+D G KQK ++P ++ L V+ IS+A A QR GRAGR
Sbjct: 380 VIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRT 439
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E F++ + T PEI R+N I+ FD MD P E
Sbjct: 440 RPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETL 499
Query: 119 SRQLVSIH 126
R L ++
Sbjct: 500 MRALEELN 507
Score = 103 (41.3 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
I+ Q V +HPS+ LA E++L+ E + T++ Y++T++ + P W+ ++ P Y
Sbjct: 681 IKDHQNVLLHPSTVLAHDA-EWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTY 733
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 257 (95.5 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 50/114 (43%), Positives = 76/114 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNIA TS+T+ G++YV+DSG VKQ H+P GLD+L+V IS+++A QR GRAGR +
Sbjct: 291 VVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAGRTS 350
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKP 113
G YR+YS E + + M +TVPEI+RT+ ++ F ++D+P
Sbjct: 351 SGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRP 404
Score = 81 (33.6 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 122 LVSIHPSSSLAGSLP--EYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+V IHPSS+L E+I+F ++ TS+ Y++T+ + W+ +++P
Sbjct: 600 IVYIHPSSTLYNQETRLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLP 648
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 220 (82.5 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT +SQA A QR GRAGR
Sbjct: 611 VVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTE 670
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F + PEI R
Sbjct: 671 PGHCYRLYSSAVFSDFEQFPPPEITR 696
Score = 124 (48.7 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP 180
V IHPSS L LPE++++ E+++T++ YMK +S ++ WI ++P Y + + +P
Sbjct: 958 VFIHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSYCQFDKPLEEP 1015
Score = 35 (17.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 103 NAATF-DFMDKPPKEIESR 120
++A F DF PP EI R
Sbjct: 679 SSAVFSDFEQFPPPEITRR 697
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 219 (82.2 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT +SQA A QR GRAGR
Sbjct: 404 VVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTE 463
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F + PEI R
Sbjct: 464 PGHCYRLYSSAVFGDFEQFPPPEITR 489
Score = 122 (48.0 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP 180
V IHPSS L LPE++++ E+++T++ YMK +S ++ WI ++P Y + + +P
Sbjct: 751 VFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEP 808
Score = 35 (17.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 103 NAATF-DFMDKPPKEIESR 120
++A F DF PP EI R
Sbjct: 472 SSAVFGDFEQFPPPEITRR 490
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 257 (95.5 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 51/115 (44%), Positives = 68/115 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAE SIT+PGI YVID+G VK + H G++ L ++S+A A QR GRAGR
Sbjct: 357 VVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRI 416
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G CYR+Y E +F R + TVPEIQR + N F ++ PP
Sbjct: 417 RPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPP 471
Score = 79 (32.9 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 13/35 (37%), Positives = 26/35 (74%)
Query: 136 PEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
P++++FTE++Q S ++ ++VI+P W+ E+ P Y
Sbjct: 673 PKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHY 704
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 249 (92.7 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 55/124 (44%), Positives = 74/124 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+++TNIAETS+T+ GI YVID G KQK ++P ++ L V+ IS+A A QR+GRAGR
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRT 407
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ F + T PEI R+N I+ FDFMD P E
Sbjct: 408 RPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
Query: 119 SRQL 122
R L
Sbjct: 468 MRAL 471
Score = 87 (35.7 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ Q+V +HPS+ L PE++++ E + T+R +++T++ I W+ ++ Y
Sbjct: 644 VKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHY 696
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 248 (92.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATNIA TS+T+ GI+Y++DSG VKQ H+ GLD+L+V IS+++A QR GRAGR A
Sbjct: 307 VVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTA 366
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKP 113
G C+R+YS++ + M + T+PEIQRT+ ++ F ++D P
Sbjct: 367 AGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCP 420
Score = 88 (36.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 123 VSIHPSSSLAGS-LP-EYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS L G L ++I+F ++L TSR Y++T+ I W+ +++P
Sbjct: 615 VLIHPSSCLFGQELQLDWIIFHDVLVTSRVYVRTVCPIRYDWVKDLLP 662
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 243 (90.6 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 58/140 (41%), Positives = 82/140 (58%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I++TNIAETS+T+ GI +V+D G KQKT++P + ++ L V IS+A A QR GRAGR
Sbjct: 345 IVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTR 404
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G C+R+Y+E+ F+ M + T PEI R+N + + FDFMD P +
Sbjct: 405 PGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLI 464
Query: 120 RQLVSIHPSSSL--AGSLPE 137
R L +H +L G L E
Sbjct: 465 RALEVLHYLGALDDEGQLTE 484
Score = 92 (37.4 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 121 QLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
Q V HPS+ L PE+ ++ E + TS Y++T++ + W+ E+ P Y Q
Sbjct: 644 QSVIFHPSTGLTRR-PEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQ 695
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 220 (82.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT +SQA A QR GRAGR
Sbjct: 610 VIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTE 669
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F + PEI R
Sbjct: 670 PGHCYRLYSSAVFGDFEQFPPPEITR 695
Score = 121 (47.7 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
V IHPSS L LPE++++ E+++T++ YMK +S ++ WI ++P Y
Sbjct: 957 VFIHPSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
Score = 35 (17.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 103 NAATF-DFMDKPPKEIESR 120
++A F DF PP EI R
Sbjct: 678 SSAVFGDFEQFPPPEITRR 696
Score = 34 (17.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 13/66 (19%), Positives = 29/66 (43%)
Query: 110 MDKPPKE--IESRQLVSIH-PSSSLAGSL------PEYILFTELLQTSRCYMKTLSVIDP 160
+ PPK+ ++ Q+ + P ++L ++ P Y L Q C T++++
Sbjct: 740 LQAPPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAA 799
Query: 161 AWITEM 166
+ E+
Sbjct: 800 MTVREL 805
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 240 (89.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 57/127 (44%), Positives = 73/127 (57%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
ILATNIAE S+T+ GI +VID G K K + +D L V IS+A A QR GRAGR
Sbjct: 903 ILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTG 962
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIES 119
G CYR+Y+EE ++ M++ +VPEIQR N IN FDFMD P E
Sbjct: 963 PGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLI 1022
Query: 120 RQLVSIH 126
L +++
Sbjct: 1023 HSLENLY 1029
Score = 102 (41.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+ Q V IHPSS+L P ++++ EL+ T++ Y++ ++I P W+ ++ P
Sbjct: 1201 TNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAP 1250
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 240 (89.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 57/127 (44%), Positives = 73/127 (57%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
ILATNIAE S+T+ GI +VID G K K + +D L V IS+A A QR GRAGR
Sbjct: 903 ILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTG 962
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIES 119
G CYR+Y+EE ++ M++ +VPEIQR N IN FDFMD P E
Sbjct: 963 PGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLI 1022
Query: 120 RQLVSIH 126
L +++
Sbjct: 1023 HSLENLY 1029
Score = 102 (41.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+ Q V IHPSS+L P ++++ EL+ T++ Y++ ++I P W+ ++ P
Sbjct: 1201 TNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAP 1250
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 219 (82.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT +SQA A QR GRAGR
Sbjct: 617 VVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTE 676
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F + PEI R
Sbjct: 677 PGHCYRLYSSAVFGDFEQFPPPEITR 702
Score = 122 (48.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP 180
V IHPSS L LPE++++ E+++T++ YMK +S ++ WI ++P Y + + +P
Sbjct: 964 VFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEP 1021
Score = 35 (17.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 103 NAATF-DFMDKPPKEIESR 120
++A F DF PP EI R
Sbjct: 685 SSAVFGDFEQFPPPEITRR 703
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 312 (114.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/135 (50%), Positives = 85/135 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++P +G+D L VT ISQA A QR+GRAGR
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT 869
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E FR M VPEIQRTN IN FDFMD PP +
Sbjct: 870 GPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSM 929
Query: 119 SRQLVSIHPSSSLAG 133
L ++H S+L G
Sbjct: 930 ITALNTLHTLSALDG 944
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAW 162
NAA D + + + Q V IHPSS+ PE++++ EL+ T++ YM+ ++ IDP W
Sbjct: 1089 NAAKRD-PQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKW 1147
Query: 163 ITEMVPGY 170
+ E P +
Sbjct: 1148 LVEFAPSF 1155
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 312 (114.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/135 (50%), Positives = 85/135 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++P +G+D L VT ISQA A QR+GRAGR
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT 869
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E FR M VPEIQRTN IN FDFMD PP +
Sbjct: 870 GPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSM 929
Query: 119 SRQLVSIHPSSSLAG 133
L ++H S+L G
Sbjct: 930 ITALNTLHTLSALDG 944
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAW 162
NAA D + + + Q V IHPSS+ PE++++ EL+ T++ YM+ ++ IDP W
Sbjct: 1089 NAAKRD-PQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKW 1147
Query: 163 ITEMVPGY 170
+ E P +
Sbjct: 1148 LVEFAPSF 1155
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 261 (96.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 57/118 (48%), Positives = 72/118 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ GI YVID G VKQ ++P TG++ L V S+A A QR GRAGR
Sbjct: 504 IVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRV 563
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKE 116
G C+R++++ F ++ N PEIQR N IN F+FMD P KE
Sbjct: 564 GPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKE 621
Score = 74 (31.1 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 125 IHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITE 165
IHPSS + P+Y+L+ EL+ TS+ YM+ ++D I E
Sbjct: 821 IHPSSCIYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKE 863
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 255 (94.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 51/117 (43%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR A
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTA 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS+E + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 77 (32.2 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 650 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 307 (113.1 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 783 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 842
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 843 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 901
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 902 ---LITAMEQLYTLGALDDEGLLTRL 924
Score = 132 (51.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1066 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1125
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1126 PAFFK----VSDPT 1135
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 307 (113.1 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 894
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 895 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 953
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 954 ---LITAMEQLYTLGALDDEGLLTRL 976
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 253 (94.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 50/117 (42%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR A
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTA 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 77 (32.2 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 650 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 804 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 863
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 864 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 922
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 923 ---LITAMEQLYTLGALDDEGLLTRL 945
Score = 132 (51.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1087 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1146
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1147 PAFFK----VSDPT 1156
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 825 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 884
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 885 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 943
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 944 ---LITAMEQLYTLGALDDEGLLTRL 966
Score = 132 (51.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1108 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1167
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1168 PAFFK----VSDPT 1177
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 827 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 886
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 887 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 945
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 946 ---LITAMEQLYTLGALDDEGLLTRL 968
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1110 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1169
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1170 PAFFK----VSDPT 1179
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 831 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 890
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 891 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 949
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 950 ---LITAMEQLYTLGALDDEGLLTRL 972
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1114 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1173
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1174 PAFFK----VSDPT 1183
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 894
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 895 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 953
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 954 ---LITAMEQLYTLGALDDEGLLTRL 976
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1118 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1177
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1178 PAFFK----VSDPT 1187
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 307 (113.1 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 845 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 904
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 905 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 963
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 964 ---LITAMEQLYTLGALDDEGLLTRL 986
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1128 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1187
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1188 PAFFK----VSDPT 1197
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 307 (113.1 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 857 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 916
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 917 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 975
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 976 ---LITAMEQLYTLGALDDEGLLTRL 998
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1140 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1199
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1200 PAFFK----VSDPT 1209
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 307 (113.1 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 70/146 (47%), Positives = 87/146 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQAQA QR GRAGR
Sbjct: 859 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 918
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M VPEIQRTN IN +FDFMD PP E
Sbjct: 919 GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET- 977
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
L++ G+L + L T L
Sbjct: 978 ---LITAMEQLYTLGALDDEGLLTRL 1000
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + +Q+V IHPSS+L PE++++ EL+ T++ YM+ ++ IDP W+ E
Sbjct: 1142 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1201
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1202 PAFFK----VSDPT 1211
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 250 (93.1 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 265 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 324
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 325 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 380
Score = 77 (32.2 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 573 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 620
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 250 (93.1 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 294 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 353
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 354 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 409
Score = 77 (32.2 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 602 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 649
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 225 (84.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 51/123 (41%), Positives = 69/123 (56%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNIAETS+T+ G+ +VID G KQK ++P ++ L V IS+A A QR GRAGR
Sbjct: 362 VISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTK 421
Query: 62 EGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G C+R+Y+E + M T PEI R+N + FDFMD P E
Sbjct: 422 PGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLM 481
Query: 120 RQL 122
R L
Sbjct: 482 RAL 484
Score = 102 (41.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ QLV++HPS+ L PE+ L+ E + T++ +++T++ + P W+ ++ P Y
Sbjct: 657 VKDNQLVNLHPSTVLDHK-PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQY 709
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 225 (84.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 51/123 (41%), Positives = 69/123 (56%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNIAETS+T+ G+ +VID G KQK ++P ++ L V IS+A A QR GRAGR
Sbjct: 362 VISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTK 421
Query: 62 EGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G C+R+Y+E + M T PEI R+N + FDFMD P E
Sbjct: 422 PGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLM 481
Query: 120 RQL 122
R L
Sbjct: 482 RAL 484
Score = 102 (41.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 117 IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
++ QLV++HPS+ L PE+ L+ E + T++ +++T++ + P W+ ++ P Y
Sbjct: 657 VKDNQLVNLHPSTVLDHK-PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQY 709
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 250 (93.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 77 (32.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 650 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 250 (93.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 77 (32.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 650 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 250 (93.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 77 (32.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 650 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 250 (93.1 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 420 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 479
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 480 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 535
Score = 77 (32.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 123 VSIHPSSSL--AGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
V IHPSS+L + E+I+F E+L T++ Y + + I W+ +++P
Sbjct: 728 VHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 775
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 304 (112.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 68/154 (44%), Positives = 92/154 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I ATNIAETS+T+PG+KYVIDSG+VK+ + P TG+ +L+V +SQ+ A QR GRAGR
Sbjct: 573 VIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRT 632
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G CYR+YS+ DF MN N PEI+R + I N A F+F+D P E +
Sbjct: 633 EPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIA 692
Query: 120 RQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMK 153
++I L G++ E EL Q C +K
Sbjct: 693 ---MAIQNLVQL-GAVVEKNGVLELTQEGHCLVK 722
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 228 (85.3 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 50/89 (56%), Positives = 59/89 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETSITV G+KYVIDSGL K K GL L T ISQA A QR GRAGRE
Sbjct: 451 VILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRE 510
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTN 89
+EG +R+Y E + + K EI+R +
Sbjct: 511 SEGKVFRLYPESTYMALPKQQESEIKRND 539
Score = 98 (39.6 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 111 DKPPKEIESRQLVSIHPSSSLAGSLP--EYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
D+ + + QL+S+HPSS+L G P + I++ E + T++ Y + +S I+ +W+ E+ P
Sbjct: 761 DRSFRTFNTGQLISVHPSSTLFGK-PNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAP 819
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 212 (79.7 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
++ATN+AETS+T+PGIKYV+D G VK++ + TG+ +VT ISQA A QR GRAGR
Sbjct: 609 VVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTE 668
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+YS F + + EI R
Sbjct: 669 PGHCYRLYSSAVFGDFSLFSEAEITR 694
Score = 116 (45.9 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
V IHPSS+L +LPE++++ E+++T++ YM+ + + WI +++P Y
Sbjct: 956 VFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQY 1003
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 299 (110.3 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 66/154 (42%), Positives = 92/154 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I ATNIAETS+T+PG+KYVIDSG+VK+ + P TG+ +L+V +SQ+ A QR GRAGR
Sbjct: 576 VIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRT 635
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIES 119
G CYR+YS+ DF MN N PEI+R + +N A F+F+D P E +
Sbjct: 636 EPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIA 695
Query: 120 RQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMK 153
+++ L G++ E EL Q C +K
Sbjct: 696 ---MAVQNLVQL-GAVVEKNGVHELTQEGHCLVK 725
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 243 (90.6 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 54/116 (46%), Positives = 69/116 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGIKYVID G + + T + L + ISQA A QR GR GR
Sbjct: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPK 115
+EG C R+YSE+DF + T PEI RTN + + A F F++ P K
Sbjct: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459
Score = 83 (34.3 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 124 SIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRI 176
SI P S L P++++ EL++TSR + + + IDP W+ E V AQH I
Sbjct: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV-EPV----AQHLI 700
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 244 (91.0 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 51/114 (44%), Positives = 71/114 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGIKYVID G + + T + L + +SQA A QR+GR GR
Sbjct: 378 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRV 437
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP 113
+EG C R+YSE+D++ + T PEI RTN ++ + A F F++ P
Sbjct: 438 SEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAP 491
Score = 81 (33.6 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 125 IHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRI 176
I P S+L P++++ EL++TSR + + + IDP W+ + AQH +
Sbjct: 724 IFPGSALTKKSPKWLMSAELVETSRLFARMNAKIDPLWLEPL-----AQHLV 770
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 226 (84.6 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 44/89 (49%), Positives = 62/89 (69%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++ +TNIAETS+T+ G+K+V+DSGL K K GL L ISQA A QR+GRAGRE
Sbjct: 356 VVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRE 415
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTN 89
+EG +R+Y E D+ ++ K + PEI R++
Sbjct: 416 SEGKSFRLYCESDYVKLPKQSEPEIARSD 444
Score = 89 (36.4 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 111 DKPPKEIESRQLVSIHPSSSLA--GSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
D+ + + + + +SIHPSS L S P I++TE + T++ Y + +S I+ +W+ E+V
Sbjct: 663 DRSYRTVSTGEPISIHPSSMLFMNKSCPG-IMYTEYVFTTKGYARNVSRIELSWLQEVVT 721
Query: 169 GYAA 172
AA
Sbjct: 722 NAAA 725
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 292 (107.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 66/133 (49%), Positives = 80/133 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQK ++ TG+D L VT ISQA A QR GRAGR
Sbjct: 856 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRT 915
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G YR+Y+E +R M VPEIQRTN IN FDFMD PP E
Sbjct: 916 GPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESL 975
Query: 119 SRQLVSIHPSSSL 131
L +H S+L
Sbjct: 976 VMALEQLHSLSAL 988
Score = 137 (53.3 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAW 162
NAA D + ++S Q+V IHPSS+L PE++++ EL+QT++ YM+ ++ IDP W
Sbjct: 1135 NAAKKDPQEGYRTLVDS-QVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKW 1193
Query: 163 ITEMVPGYAAQHRIVTDPT 181
+ E P + R +DPT
Sbjct: 1194 LVEFAPSF---FRF-SDPT 1208
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 288 (106.4 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAETSIT+PGI+YVID G VK +++ P G++ L V S+AQ QR+GRAGRE
Sbjct: 353 VILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGRE 412
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIES 119
G +R+Y E +F ++ +T PEI+R N I+ FDF+DKP +
Sbjct: 413 GPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAII 472
Query: 120 RQLVSIHPSSSLA 132
+ L +H +LA
Sbjct: 473 KALAELHSLGALA 485
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 110 MDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+D + +ES ++V IHP+S L + PE ++F EL+QTS+ Y+K L++ID W++E+ P
Sbjct: 652 LDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAP 710
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 291 (107.5 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 69/146 (47%), Positives = 85/146 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YVID G KQK +P G+D L V ISQA A QR+GRAGR
Sbjct: 778 VVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRT 837
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E F+ M +++PEIQRTN IN FDFMD PP +
Sbjct: 838 GPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQT- 896
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
LVS G+L E L T L
Sbjct: 897 ---LVSAMEQLYSLGALDEEGLLTRL 919
Score = 120 (47.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGY 170
K + Q V IHPSS+L P+++++ EL+ T++ YM+ + IDP W+ E+ P +
Sbjct: 1068 KTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKF 1123
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 250 (93.1 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 49/117 (41%), Positives = 78/117 (66%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 401
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKE 116
G C+R+YS++ + + M + +PEI+RT+ I+ F ++D PP E
Sbjct: 402 SGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD-PPNE 457
Score = 64 (27.6 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 106 TFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITE 165
TF MD + Q +H + E+I+F E+L T++ Y + + I W+ +
Sbjct: 639 TFCTMDGRGSPVHIHQNCKLHEQETKL----EWIIFHEVLVTTKVYARIVCPIRYEWVRD 694
Query: 166 MVP 168
++P
Sbjct: 695 LLP 697
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 290 (107.1 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 63/133 (47%), Positives = 81/133 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETS+T+ GI YV+D G VKQ P G+D L VT ISQAQA QR+GRAGR
Sbjct: 781 VVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRT 840
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M + +PEIQR N IN FDFMD PP +
Sbjct: 841 GPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTM 900
Query: 119 SRQLVSIHPSSSL 131
L +++ S+L
Sbjct: 901 IAALQNLYALSAL 913
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAW 162
N A D + K I V +HPS L G E++++ EL+QTS+ YM T+S ++P W
Sbjct: 1060 NVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKW 1119
Query: 163 ITEMVPGY 170
+ E+ P +
Sbjct: 1120 LVEVAPTF 1127
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 240 (89.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 54/116 (46%), Positives = 67/116 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGIKYVID G + + T + L + ISQA A QR GR GR
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRT 414
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPK 115
EG C R+YSEEDF + T PEI RTN + + F F++ P K
Sbjct: 415 EEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDK 470
Score = 78 (32.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 124 SIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
+I P+S L P++++ EL++TS+ + + ++ I+P WI
Sbjct: 664 NIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWI 703
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 240 (89.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 54/116 (46%), Positives = 67/116 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGIKYVID G + + T + L + ISQA A QR GR GR
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRT 414
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPK 115
EG C R+YSEEDF + T PEI RTN + + F F++ P K
Sbjct: 415 EEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDK 470
Score = 78 (32.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 124 SIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
+I P+S L P++++ EL++TS+ + + ++ I+P WI
Sbjct: 664 NIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWI 703
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 231 (86.4 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 55/141 (39%), Positives = 76/141 (53%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATN+AETS+T+PGIKYV+D+G VK K + TG++ +V ISQA A QR GRAGR
Sbjct: 675 VVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRT 734
Query: 61 AEGFCYRMYSEEDFRRM-NKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEI 117
G CYR+YS F + ++++PEI + I F F P P I
Sbjct: 735 GPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAI 794
Query: 118 ES--RQLVSIHPSSSLAGSLP 136
R L ++ S G P
Sbjct: 795 REAERCLKALEALDSNGGLTP 815
Score = 86 (35.3 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTDP 180
V +H SSL S PE ++++ELL T+R YM + + P W+ + + DP
Sbjct: 1038 VFLHRWSSLINSAPELLVYSELLLTNRPYMHGATRVRPEWLVKHAKSLCVFSAPLKDP 1095
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 284 (105.0 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 63/133 (47%), Positives = 79/133 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETSIT+ I YVID G VKQK + P G+D L VT ISQAQA QR GRAGR
Sbjct: 847 VVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRT 906
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E ++ M T+P+IQR N IN FDFMD PP
Sbjct: 907 GPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTM 966
Query: 119 SRQLVSIHPSSSL 131
L ++ S+L
Sbjct: 967 LTALEELYALSAL 979
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 280 (103.6 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 60/132 (45%), Positives = 82/132 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++L+TNIAETS+T+ GI+YVID+GL K K + GL+ L V ISQ+ A QR+GRAGRE
Sbjct: 366 VVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGRE 425
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIES 119
A G CYR+Y+E DF ++ K T+PEI+R + N F +MD P KE
Sbjct: 426 AAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLL 485
Query: 120 RQLVSIHPSSSL 131
R L ++ +L
Sbjct: 486 RALEHLYSIGAL 497
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 80 NTVPEIQRTNXXXXXXXXXXXEINAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYI 139
N+ PE+ N N A D + I Q +SIHPSSSL G E I
Sbjct: 626 NSSPEVNSENLLLSFLSGYIT--NTALLH-PDGSYRTIIGNQTISIHPSSSLFGKKVEAI 682
Query: 140 LFTELLQTSRCYMKTLSVIDPAWITEMVPGYAAQ 173
++ EL+ T++ Y++ +S I W+ + P Y A+
Sbjct: 683 MYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLAR 716
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 59/146 (40%), Positives = 88/146 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I +TNIAE S+T+ GI YV+DSG VK + ++P TG++ L IS+A A QR GRAGR
Sbjct: 308 VIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRT 367
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G C+R+Y+EE + ++ +PE+QR+N I N FDF+ PP E+ +
Sbjct: 368 KPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMT 427
Query: 120 RQLVSIHPSSSLAGSLPEYILFTELL 145
+ L ++ SL G+L +Y T+ L
Sbjct: 428 KALELLY---SL-GALDDYAKLTKPL 449
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 278 (102.9 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 64/146 (43%), Positives = 85/146 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAE S+T+ GI YV+D G KQ ++P GL+ L +T ISQA A QR GRAGR
Sbjct: 785 VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 844
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G CYR+Y+E +R M ++PEIQR N IN +FDFMD PP +
Sbjct: 845 GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMD-PP---Q 900
Query: 119 SRQLVSIHPSSSLAGSLPEYILFTEL 144
+ L+S G+L E L T+L
Sbjct: 901 PQALISAMEQLYSLGALDEEGLLTKL 926
Score = 127 (49.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 112 KPPKE----IESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
K P+E + Q V IHPSS+L P+++++ +L+ T++ YM+ ++VIDP W+ E+
Sbjct: 1068 KDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELA 1127
Query: 168 PGYAAQHRIVTDPT 181
P + V+DPT
Sbjct: 1128 PRFFK----VSDPT 1137
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 226 (84.6 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 52/119 (43%), Positives = 66/119 (55%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGI+YVID G + + T + L + ISQA A QR GR GR
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRV 401
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEI 117
G C R+Y E DF T PEI RTN + + A F F++ P P+ I
Sbjct: 402 GPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHI 460
Score = 77 (32.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 125 IHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
+ P S LA P++I+ EL++TS+ + + + I+P W+
Sbjct: 649 VFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWL 687
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 226 (84.6 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 52/119 (43%), Positives = 66/119 (55%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGI+YVID G + + T + L + ISQA A QR GR GR
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRV 401
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP-PKEI 117
G C R+Y E DF T PEI RTN + + A F F++ P P+ I
Sbjct: 402 GPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHI 460
Score = 77 (32.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 125 IHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
+ P S LA P++I+ EL++TS+ + + + I+P W+
Sbjct: 649 VFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWL 687
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 201 (75.8 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 40/86 (46%), Positives = 57/86 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATN+AETS+T+P IKYV+D+G VKQ+ ++ G+ +V S+A A QR GRAGR
Sbjct: 874 VVVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRT 933
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEI 85
G CYR+YS F + + PEI
Sbjct: 934 GPGHCYRIYSSAVFNDHFQQFSKPEI 959
Score = 102 (41.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 17/41 (41%), Positives = 32/41 (78%)
Query: 125 IHPSSSLAG--SLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
IHP+S+L G + EY+++ ++++TSR YMK ++ I+P+W+
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 272 (100.8 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 59/133 (44%), Positives = 80/133 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI YVID G VK+ +P TG++ L VT S+A A QR GRAGR
Sbjct: 752 VVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRV 811
Query: 61 AEGFCYRMYSE-EDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y++ + + ++T PEIQRTN I+ FDFMD PP E
Sbjct: 812 GPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETI 871
Query: 119 SRQLVSIHPSSSL 131
R L ++ +L
Sbjct: 872 IRALEQLYALGAL 884
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 272 (100.8 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 61/133 (45%), Positives = 78/133 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETSIT+ I YV+D G VKQ + P G+D L VT ISQAQA QR GRAGR
Sbjct: 812 VVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRT 871
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E ++ M ++PEIQR N IN FDFMD PP
Sbjct: 872 GPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTM 931
Query: 119 SRQLVSIHPSSSL 131
L ++ S+L
Sbjct: 932 LTALEELYALSAL 944
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 218 (81.8 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 50/117 (42%), Positives = 67/117 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATN+AETS+TVPGI+ VID+G + + + L L + IS+A A QR GR GR
Sbjct: 344 IVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRV 403
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G C R+YSE+DF + T PEI RTN + + F F++ PP E
Sbjct: 404 GPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVE-PPDE 459
Score = 82 (33.9 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 121 QLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWI 163
Q I P S L + P +I+ E ++TSR Y +T++ I+P WI
Sbjct: 645 QKFQIFPGSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWI 687
Score = 35 (17.4 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 152 MKTLSVIDPAWITEMVPG 169
+ L+ IDP ++ +VPG
Sbjct: 875 LHVLNQIDPEPLSWLVPG 892
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 269 (99.8 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 59/133 (44%), Positives = 78/133 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETSIT+ G+ +VIDSG VKQ ++P TG++ L S+A A QR GRAGR
Sbjct: 689 VVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRV 748
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIE 118
G C+R+Y+ + ++ T PEIQRTN IN FDFMD PP E
Sbjct: 749 GPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETL 808
Query: 119 SRQLVSIHPSSSL 131
R L ++ +L
Sbjct: 809 MRSLELLYALGAL 821
Score = 128 (50.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 103 NAATFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAW 162
NAA D + ++S Q V IHPSSS+A P+ I++ EL+ T++ Y + ++ I P W
Sbjct: 970 NAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEW 1029
Query: 163 ITEMVPGY 170
+ E+ P Y
Sbjct: 1030 LLEISPHY 1037
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 253 (94.1 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 52/118 (44%), Positives = 72/118 (61%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TN+AETS+T+ GI++VIDSG V H PGTG L +S+A A QR GRAGR
Sbjct: 350 ILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTG 409
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI--NAATFDFMDKPPKEI 117
G CYR+YS+E F +M+ TV EI R + + + TF F++KP +++
Sbjct: 410 PGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDV 467
Score = 42 (19.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 120 RQLVSIHPSSSLAGSLPEYI 139
+ IHP+SS+A PE I
Sbjct: 751 KPFTQIHPNSSIAQYHPETI 770
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 265 (98.3 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 58/145 (40%), Positives = 85/145 (58%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+TVPG++YVID+G K K + GL+ L V +IS++ A QR GRAGRE
Sbjct: 441 VVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGRE 500
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEIES 119
A G CYR+Y+E+ ++ M +PEI R N ++ TF MD P
Sbjct: 501 APGKCYRLYTEDVYKEMRDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRME 560
Query: 120 RQLVSIHPSSSLAGSLPEYILFTEL 144
+ +V ++ + G++ + TEL
Sbjct: 561 KAMVQLN----ILGAIDDEGAITEL 581
Score = 111 (44.1 bits), Expect = 0.00050, P = 0.00050
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMVPG 169
+ + +V+IHPSSSL G E I+F E + T + Y K ++VI WI E++ G
Sbjct: 750 QGKHVVAIHPSSSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEVLEG 801
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 250 (93.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 52/118 (44%), Positives = 75/118 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNI ETSIT+ I YVIDSGL KQK ++P +G++ L S+A QRTGRAGR+
Sbjct: 805 IILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAGRK 864
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEI 117
+G C+R+++++ F ++ N++PEIQR ++ FDF+D PP I
Sbjct: 865 RDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLD-PPSPI 921
Score = 44 (20.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 115 KEIESRQLVSIHPSSSL-AGSLPEY-----ILFTELLQTSRCYMK 153
K I+ Q+VSI+P+S L ++ E I+F E+++ ++ Y++
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIR 1145
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 250 (93.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 52/118 (44%), Positives = 75/118 (63%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNI ETSIT+ I YVIDSGL KQK ++P +G++ L S+A QRTGRAGR+
Sbjct: 805 IILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAGRK 864
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEI 117
+G C+R+++++ F ++ N++PEIQR ++ FDF+D PP I
Sbjct: 865 RDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLD-PPSPI 921
Score = 44 (20.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 115 KEIESRQLVSIHPSSSL-AGSLPEY-----ILFTELLQTSRCYMK 153
K I+ Q+VSI+P+S L ++ E I+F E+++ ++ Y++
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIR 1145
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 218 (81.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 50/114 (43%), Positives = 66/114 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETSIT+ + VIDSGLVK +++P + L T ISQA QR GRAGR
Sbjct: 282 VVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRV 341
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKP 113
G CYR+YS +DF + T+ EI RT+ I+ FDF+ P
Sbjct: 342 RAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPP 395
Score = 68 (29.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 121 QLVSIHPSSSLAGSLPEYILFTELLQTSRCYMKTLSVIDPAWITEMV 167
+ + IHP S + P++I+ E+++TSR Y ++S + I E++
Sbjct: 577 ECIHIHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKK-IAELI 622
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 260 (96.6 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 64/173 (36%), Positives = 93/173 (53%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IILATNIAETS+TV G++YV+D G K K GLD L V IS++ A QR GRAGRE
Sbjct: 464 IILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGRE 523
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
A G CYR+Y+E+D+ +++ PEI R + + N F F+ +PP+E
Sbjct: 524 APGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALE 583
Query: 120 RQLVSIHPSSSL--AGSLPE---YILFTELLQTSRCYMKTLSVIDPAWITEMV 167
+ L+ + +L G + E +I L T + S P +T+++
Sbjct: 584 KALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVI 636
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 256 (95.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 54/146 (36%), Positives = 84/146 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAE S+T+ GI YV+D G K + + P TG++ L IS+A A QR GRAGR
Sbjct: 308 VVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRT 367
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G C+R+Y++ + ++ T+PEIQR+N I N FDF+ PP ++
Sbjct: 368 KPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVI 427
Query: 120 RQLVSIHPSSSLAGSLPEYILFTELL 145
R ++ SL G++ +Y T+ L
Sbjct: 428 RAFELLY---SL-GAIDDYAKLTKPL 449
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 186 (70.5 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 46/117 (39%), Positives = 64/117 (54%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATNIAETS+TV GI +VIDSG K K P G L++ I + Q TG +G +
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTS 861
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
C R+Y++ ++ + TVPEIQRTN + + F FMD PP++
Sbjct: 862 PRCC-RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 917
Score = 101 (40.6 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 125 IHPSSSLAGS--LPEYILFTELLQTSRCYMKTLSVIDPAWITEMVP 168
+HP+SSL G P+YI++ EL+ T++ YM+ ++ +D W+ E+ P
Sbjct: 1100 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1145
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 234 (87.4 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ ++ P L LQ ISQA A QR GRAGR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 497 PGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPP 550
Score = 51 (23.0 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 118 ESRQLVSIHPSSSLAGSLPEYILFTELLQTSRC 150
+++Q +HP+ AGS PE +L + L+ S C
Sbjct: 832 QAKQGAVLHPTCVFAGS-PE-VLHAQELEASNC 862
Score = 34 (17.0 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYM 152
+E+E+ S + + F LL+T++ Y+
Sbjct: 855 QELEASNCDGSRDDKDKMSSKHQLLSFVSLLETNKPYL 892
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 253 (94.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 384 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 443
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 444 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 503
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 504 MRALELLNYLAALNDDGDLTE 524
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 391 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 450
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 451 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 510
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 511 MRALELLNYLAALNDDGDLTE 531
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 213 (80.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 46/115 (40%), Positives = 65/115 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI+YVID G VK+ ++ P TG+ L S+A QR GRAGR
Sbjct: 497 VVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRV 556
Query: 61 AEGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKP 113
G C+R++++ + + PEI RTN + + F MDKP
Sbjct: 557 GPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKP 611
Score = 67 (28.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 123 VSIHPSSSL------AGSLP-EYILFTELLQTSRCYMKTLSVIDPA-WITEMVP 168
VS+HP+S L P +Y+L+ +L+ TS+ +++ VI W+ +MVP
Sbjct: 807 VSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVP 860
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETS+T+ G+ +VID G KQK ++P ++ L VT+IS+A A QR GRAGR
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQRTNXXXXXXXXXXXEINAAT-FDFMDKPPKEIE 118
G C+R+Y+E+ ++ M NT PEI R+N I+ FDFMD P E
Sbjct: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETL 536
Query: 119 SRQLVSIHPSSSLA--GSLPE 137
R L ++ ++L G L E
Sbjct: 537 MRALELLNYLAALNDDGDLTE 557
>UNIPROTKB|F5H625 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
IPI:IPI01010408 DNASU:79665 HGNC:HGNC:18018 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 EMBL:AC091271 EMBL:AC004167
Ensembl:ENST00000538926 UCSC:uc010woe.2 ArrayExpress:F5H625
Bgee:F5H625 Uniprot:F5H625
Length = 250
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 43/89 (48%), Positives = 69/89 (77%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TNI+ TS+T+ GI+YV+D G VKQ H+P GLD+L+V IS+++A QR+GRAGR +
Sbjct: 18 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTS 77
Query: 62 EGFCYRMYSEEDFRR-MNKNTVPEIQRTN 89
G C+R+YS++ + + M + +PEI+RT+
Sbjct: 78 SGKCFRIYSKDFWNQCMPDHVIPEIKRTS 106
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 246 (91.7 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 54/133 (40%), Positives = 79/133 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ G+ YV+D G VK K++ +GL+ L + S++ A QR GRAGR
Sbjct: 361 IIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRS 420
Query: 61 AEGFCYRMYSEEDFRRMNKN-TVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIE 118
G CYR+Y+E + ++ + T+PEIQR+N I N FDF+ +PP
Sbjct: 421 RAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSL 480
Query: 119 SRQLVSIHPSSSL 131
R L ++ +L
Sbjct: 481 IRGLEVLYGLGAL 493
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 225 (84.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VIDSG K+ +H + + L+ T +S+A A QR GRAGR
Sbjct: 928 IVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 987
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ + F + +VPEI R
Sbjct: 988 RDGFCFRMYTRDRFESFMEYSVPEILR 1014
Score = 52 (23.4 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 108 DFMDKPPKEIESRQ-LVSIHPSSSLAG-SLPEYILFTELLQTSRCYMKTLSVIDPAWITE 165
D +K +E+ Q +HPSS + ++L+ E ++ ++ Y++ ++I P I
Sbjct: 1240 DITEKLACLVETAQGKAQVHPSSVNRDLQVHGWLLYQEKVRYAKVYLRETTLISPFPILL 1299
Query: 166 MVPGYAAQHR 175
QHR
Sbjct: 1300 FGGDIEVQHR 1309
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 218 (81.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 986 RDGFCFRMYTRERFEGFMDYSVPEILR 1012
Score = 58 (25.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1229 IYTKSVDVTEKLACIVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKIRYARVYLRETTLI 1287
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1288 TPFSVLLFGGDIEVQHR 1304
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 218 (81.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 986 RDGFCFRMYTRERFEGFMDYSVPEILR 1012
Score = 58 (25.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1232 IYTKSVDVTEKLACIVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKIRYARVYLRETTLI 1290
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1291 TPFSVLLFGGDIEVQHR 1307
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 218 (81.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 986 RDGFCFRMYTRERFEGFMDYSVPEILR 1012
Score = 58 (25.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1232 IYTKSVDVTEKLACIVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKIRYARVYLRETTLI 1290
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1291 TPFSVLLFGGDIEVQHR 1307
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 218 (81.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 923 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 982
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 983 RDGFCFRMYTRERFEGFMDYSVPEILR 1009
Score = 56 (24.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1229 IYTKSVDITEKLACIVETAQGKAQVHPSS-VNRDLQIYGWLLYQEKIRYARVYLRETTLI 1287
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1288 TPFPVLLFGGDIEVQHR 1304
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 218 (81.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 923 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 982
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 983 RDGFCFRMYTRERFEGFMDYSVPEILR 1009
Score = 56 (24.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1229 IYTKSVDVTEKLACIVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKVRYTRVYLRETTLI 1287
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1288 TPFPVLLFGGDIEVQHR 1304
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 218 (81.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 986 RDGFCFRMYTRERFEGFMDYSVPEILR 1012
Score = 56 (24.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVI 158
I + D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I
Sbjct: 1232 IYTKSVDVTEKLACIVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKVRYTRVYLRETTLI 1290
Query: 159 DPAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1291 TPFPVLLFGGDIEVQHR 1307
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 216 (81.1 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+R+Y+ E F + +VPEI R
Sbjct: 986 RDGFCFRLYTRERFEGFLEYSVPEILR 1012
Score = 56 (24.8 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 108 DFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVIDPAWIT 164
D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I P +
Sbjct: 1235 DVTEKLACMVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKVRYARVYLRETTLITPFPVL 1293
Query: 165 EMVPGYAAQHR 175
QHR
Sbjct: 1294 LFGGDIEVQHR 1304
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 218 (81.8 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 926 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 985
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+RMY+ E F +VPEI R
Sbjct: 986 RDGFCFRMYTRERFEGFMDYSVPEILR 1012
Score = 52 (23.4 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 102 INAATFDFMDKPPKEIESRQ-LVSIHPSSSLAGSLPE-YILFTELLQTSRCYMKTLSVID 159
I + D +K +E+ Q +HPSS ++L+ E ++ +R Y++ ++I
Sbjct: 1232 IYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTHGWLLYQEKIRYARVYLRETTLIT 1291
Query: 160 PAWITEMVPGYAAQHR 175
P + QHR
Sbjct: 1292 PFPVLLFGGDIEVQHR 1307
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 214 (80.4 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAET IT+P + +VID+G K+ +H + + L T +S+A A QR GRAGR
Sbjct: 925 IVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 984
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+GFC+R+Y+ E F +VPEI R
Sbjct: 985 RDGFCFRLYTRERFEGFLDYSVPEILR 1011
Score = 56 (24.8 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 108 DFMDKPPKEIESRQ-LVSIHPSSSLAGSLPEY--ILFTELLQTSRCYMKTLSVIDPAWIT 164
D +K +E+ Q +HPSS + L Y +L+ E ++ +R Y++ ++I P +
Sbjct: 1234 DVTEKLACMVETAQGKAQVHPSS-VNRDLQTYGWLLYQEKVRYTRVYLRETTLITPFPVL 1292
Query: 165 EMVPGYAAQHR 175
QHR
Sbjct: 1293 LFGGDIEVQHR 1303
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 217 (81.4 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G G++ L+ T +SQA A QR GRAGR
Sbjct: 861 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 920
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ + ++ K +PEIQR
Sbjct: 921 ASGVCFHLFTSHHYNHQLLKQQLPEIQR 948
Score = 52 (23.4 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+L+ E ++TSR +++ S++
Sbjct: 1214 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1252
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 240 (89.5 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 53/134 (39%), Positives = 75/134 (55%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ ++ P L LQ ISQA A QR GRAGR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIESR 120
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 497 PGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLET 556
Query: 121 QLVSIHPSSSLAGS 134
++ + +L GS
Sbjct: 557 AILYLRDQGALDGS 570
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 217 (81.4 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G G++ L+ T +SQA A QR GRAGR
Sbjct: 911 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 970
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ + ++ K +PEIQR
Sbjct: 971 ASGVCFHLFTSHHYNHQLLKQQLPEIQR 998
Score = 52 (23.4 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+L+ E ++TSR +++ S++
Sbjct: 1264 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1302
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 217 (81.4 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G G++ L+ T +SQA A QR GRAGR
Sbjct: 914 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 973
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ + ++ K +PEIQR
Sbjct: 974 ASGVCFHLFTSHHYNHQLLKQQLPEIQR 1001
Score = 52 (23.4 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+L+ E ++TSR +++ S++
Sbjct: 1267 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1305
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 211 (79.3 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G++ L+ T +SQA A QR GRAGR
Sbjct: 233 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 292
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ + ++ K +PEIQR
Sbjct: 293 ASGVCFHLFTSHHYNHQLLKQQLPEIQR 320
Score = 49 (22.3 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 114 PKEIESRQLVSIHPSSSLAGSLPE-YILFTELLQTSRCYMKTLSVI 158
PK I + +++P+ Y+L+ E ++TSR +++ S++
Sbjct: 534 PKLISAMLCAALYPNVVQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 579
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 239 (89.2 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 53/134 (39%), Positives = 74/134 (55%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ ++ P L LQ ISQA A QR GRAGR
Sbjct: 439 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 498
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIESR 120
G CYR+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 499 PGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVET 558
Query: 121 QLVSIHPSSSLAGS 134
++ + +L S
Sbjct: 559 AILYLQEQGALDSS 572
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 234 (87.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ ++ P L LQ ISQA A QR GRAGR
Sbjct: 352 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 411
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 412 PGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPP 465
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 230 (86.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 50/114 (43%), Positives = 67/114 (58%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ + P L LQ ISQA A QR GRAGR
Sbjct: 436 ILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTG 495
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 496 PGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPP 549
Score = 34 (17.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYM 152
+E E+R S + + F LL+T++ Y+
Sbjct: 848 QEQEARGSEGSQDDKDKMSSKHQLLTFVSLLETNKPYL 885
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 230 (86.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 50/114 (43%), Positives = 67/114 (58%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ + P L LQ ISQA A QR GRAGR
Sbjct: 441 ILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTG 500
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 501 PGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPP 554
Score = 34 (17.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 115 KEIESRQLVSIHPSSSLAGSLPEYILFTELLQTSRCYM 152
+E E+R S + + F LL+T++ Y+
Sbjct: 853 QEQEARGSEGSQDDKDKMSSKHQLLTFVSLLETNKPYL 890
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 217 (81.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETS+T+ + YVIDSG +K+K + P G++ L+ T +S+A A QR GRAGR
Sbjct: 902 IIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRV 961
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ ++S + ++ K +PEIQR
Sbjct: 962 ASGVCFHLFSSHHYNHQLIKQQLPEIQR 989
Score = 48 (22.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS Y+++ E ++TSR +++ S++
Sbjct: 1256 VHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMV 1294
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 226 (84.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 48/114 (42%), Positives = 66/114 (57%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I++TNIAETS+T+ G+++V+DSG VK+ + P + LQ IS+A + QR GRAGR
Sbjct: 437 IISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTG 496
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G CYR+YSE D+ VPEI R + + TF F+D PP
Sbjct: 497 PGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPP 550
Score = 36 (17.7 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 119 SRQLVSIHPSSSLAGSLPEYI 139
++Q V IHP+S A PE +
Sbjct: 842 NKQGVVIHPTSVFASD-PEVL 861
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 234 (87.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
IL+TNIAETS+T+ GI++V+DSG VK+ ++ P L LQ ISQA A QR GRAGR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G C+R+Y+E D+ VPEI+R + + TF F++ PP
Sbjct: 497 PGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPP 550
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 214 (80.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G++ L+ T +SQA A QR GRAGR
Sbjct: 904 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 963
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ F ++ K +PEIQR
Sbjct: 964 ASGVCFHLFTSHHFNHQLLKQQLPEIQR 991
Score = 49 (22.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+++ E ++TSR +++ S++
Sbjct: 1258 VHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMV 1296
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 214 (80.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G++ L+ T +SQA A QR GRAGR
Sbjct: 905 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 964
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ F ++ K +PEIQR
Sbjct: 965 ASGVCFHLFTSHHFNHQLLKQQLPEIQR 992
Score = 49 (22.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+++ E ++TSR +++ S++
Sbjct: 1258 VHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMV 1296
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 211 (79.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G++ L+ T +SQA A QR GRAGR
Sbjct: 909 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 968
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
A G C+ +++ + ++ K +PEIQR
Sbjct: 969 ASGVCFHLFTSHHYNHQLLKQQLPEIQR 996
Score = 52 (23.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS + Y+L+ E ++TSR +++ S++
Sbjct: 1262 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1300
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 193 (73.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TN+AETS+T+PG+KYVID G K++ + TG+ V ISQA QR GRAGR +
Sbjct: 604 VISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRIS 663
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEI 85
G YR+YS ++ K PEI
Sbjct: 664 AGHAYRLYSSAVYQDFVKFADPEI 687
Score = 68 (29.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTS-RCYMKTLSVIDPAWITEMVPGY 170
V I P S + PE++++ EL+Q + + M ++ +D W++ + Y
Sbjct: 942 VFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESY 990
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 228 (85.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 47/87 (54%), Positives = 57/87 (65%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNI +TSIT+P + YVID+GL K KT+ L +T ISQA A QR GRAGR
Sbjct: 517 IILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRV 576
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CYR+Y + RMN T+PEI R
Sbjct: 577 CHGNCYRLYDNDRMARMNLYTIPEIMR 603
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 205 (77.2 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 48/118 (40%), Positives = 67/118 (56%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATN+AETS+T+PGI+YV+D G K++ ++ G+ +V +S+A A QR GRAGR
Sbjct: 800 IVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTG 859
Query: 62 EGFCYRMYSE---EDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINA-ATFDFMDKPPK 115
G CYR+YS EDF + +VPEI R I+ A F F P +
Sbjct: 860 PGHCYRLYSSAVFEDF--FPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDR 915
Score = 48 (22.0 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 113 PPKEIESRQLVSIHPSSSLA--GSLPE-YILFTEL 144
P IE V +HP+S +A G +P Y+++ L
Sbjct: 1134 PVMPIEDGPFVYLHPNSLIAESGQIPSSYLVYQSL 1168
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 185 (70.2 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
+++TN+AETS+T+P IKYV+D G K + + TG+ VT S+A A QR GRAGR +
Sbjct: 646 VVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRIS 705
Query: 62 EGFCYRMYSEEDFRRMNKN-TVPEIQR 87
G CYR+YS + ++ + P+IQ+
Sbjct: 706 AGHCYRLYSSAVYNDCFEDFSQPDIQK 732
Score = 67 (28.6 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 125 IHPSSSLAGSLPEYILFTEL--LQ---TSRCYMKTLSVIDPAWITEMVPGYAAQHRIVTD 179
+H SS L PE++++ E LQ +++ +++ ++ I+P W+ VP + D
Sbjct: 991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVPLLCNIREVRED 1050
Query: 180 P 180
P
Sbjct: 1051 P 1051
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 218 (81.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATN+AETS+T+PGI+YV DSG K++ + TG+ +V IS+A A QR GRAGR
Sbjct: 703 VVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRT 762
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE-- 116
G C+R+YS + R +++ +PE+ RT+ + + F F P ++
Sbjct: 763 GPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSL 822
Query: 117 IESRQLVSIHPSSSLAGSLPE 137
++S +L+ + S G + +
Sbjct: 823 VKSEKLLKYISAVSEEGRVTQ 843
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 195 (73.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETS+T+ + YVIDSG +K+K + ++ L+ +S+A A QR GRAGR
Sbjct: 952 IIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRV 1011
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQR 87
A G C+ +++ F +++ +PEIQR
Sbjct: 1012 ASGVCFHLFTSHRFEHHLSQQQLPEIQR 1039
Score = 52 (23.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 123 VSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVI 158
V IHPSS S+ Y+++ E ++TSR +++ S++
Sbjct: 1306 VHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMV 1344
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 185 (70.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I ATNIAETSIT+ + YVIDSG K+ ++P L + ISQA A QRTGRAGR
Sbjct: 975 VIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRV 1034
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQR 87
G C+ +Y+ F + M VPE+ R
Sbjct: 1035 KPGICFSLYTRYRFEKLMRPYQVPEMLR 1062
Score = 62 (26.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 118 ESRQLVSIHPSS---SLAGSLPEYILFTELLQTSRCYMKTLSVIDP 160
+ R+ V IHPSS + +++F E ++T++ Y++ +++ P
Sbjct: 1332 DGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II++TNIAETSIT+ + YVIDSG +K+K + G++ L+ T +SQA A QR GRAGR
Sbjct: 103 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 162
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
G C+ +++ F ++ K +PEIQR
Sbjct: 163 TSGVCFHLFTSHHFNHQLLKQQLPEIQR 190
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 215 (80.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 49/129 (37%), Positives = 72/129 (55%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATN+AETS+T+PG++YV+DSG K++ ++ G+ +V +S+A A QR+GRAGR
Sbjct: 758 IVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTG 817
Query: 62 EGFCYRMYS----EEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKE 116
G CYR+YS E DF + +K PEI R I N F F PP
Sbjct: 818 PGHCYRLYSSAVFEHDFEQFSK---PEILRMPVESIVLQMKSMAIHNIINFPF-PTPPDR 873
Query: 117 IESRQLVSI 125
+ + + +
Sbjct: 874 VALSKAIQL 882
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 213 (80.0 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 56/145 (38%), Positives = 79/145 (54%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I+ATN+AETSIT+P I+YV+D G K++ ++ T + +V IS+A A QR GRAGR
Sbjct: 731 IVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTG 790
Query: 62 EGFCYRMYSEEDF-RRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIES 119
G CYR+YS F +++PEI RT I N A F F P + S
Sbjct: 791 PGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGR---S 847
Query: 120 RQLVSIHPSSSLAGSLPEYILFTEL 144
R S+ S+L G++ + T+L
Sbjct: 848 RLEKSLKLLSNL-GAIDSEGVLTKL 871
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+L+TN+AE+S+T+ GI VIDSG +Q + +P TG+ L + ISQA A QR GRAGR
Sbjct: 273 IVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRL 332
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTN 89
A G C R++ +E+ +R+ K PEI + +
Sbjct: 333 AAGVCIRLWGQEEHQRLLKADEPEISQAD 361
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+L+TN+AE+S+T+ GI VIDSG +Q + +P TG+ L + ISQA A QR GRAGR
Sbjct: 273 IVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRL 332
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTN 89
A G C R++ +E+ +R+ K PEI + +
Sbjct: 333 AAGVCIRLWGQEEHQRLLKADEPEISQAD 361
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 210 (79.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAE+++T+ + YVIDSG +K+K++ P + LQ + +S+A A QR GRAGR
Sbjct: 611 IVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRC 670
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDK---PPKEI 117
G CY +YS M VPEI+R + N T DF+ K PP +
Sbjct: 671 QPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQ 730
Query: 118 ESRQLVSI 125
+SI
Sbjct: 731 SIANALSI 738
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 203 (76.5 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 47/128 (36%), Positives = 72/128 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAE+++T+ + YVIDSG +K+K++ P + LQ + +S+A A QR GRAGR
Sbjct: 635 IVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRC 694
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDK---PP--K 115
G CY +YS+ + + VPE+ R + N DF+ K PP +
Sbjct: 695 QAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQ 754
Query: 116 EIESRQLV 123
IE+ ++
Sbjct: 755 SIENALII 762
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 199 (75.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/87 (44%), Positives = 60/87 (68%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IILATNIAE SIT+ + +V+D+G VK+K+ L L V I+++ A QR+GRAGR
Sbjct: 705 IILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRV 764
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
A G+C R+Y+E+++ M + + E++R
Sbjct: 765 ANGYCIRLYTEQEYNSMPETQIAEMKR 791
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 197 (74.4 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 48/116 (41%), Positives = 67/116 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 683 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRC 742
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N A DF+ K P+
Sbjct: 743 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAPE 798
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 192 (72.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LAT+IAETS+T+P ++ V+D G ++ PG+G+ L +++A+A QR GRAGR
Sbjct: 271 VVLATSIAETSLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAEATQRAGRAGRV 330
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDKPPKEI--E 118
AEG CYR+++ + + EI+ + F+ +PP+ E
Sbjct: 331 AEGICYRLWTRGEEGALAAFPPAEIEAADLTGLALELALWGAEPGALGFVTQPPETALAE 390
Query: 119 SRQLVSIHPSSSLAGSLPEY 138
+R L+ + G + ++
Sbjct: 391 ARALLGFLGAIDAQGRITDH 410
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 177 (67.4 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATNIAETSIT+ ++ V+D G V Q T + TG V+ S+A QR GRAGR
Sbjct: 960 VVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRT 1019
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX---XXXXXXXEINAATFDFMDK---PP 114
+ G C++++++ ++ PEI RT+ N DF+++ PP
Sbjct: 1020 SSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEPP 1079
Query: 115 --KEIES--RQLVSI 125
++I+S +L+SI
Sbjct: 1080 SSEQIQSSINELISI 1094
Score = 45 (20.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 110 MDKPPKEIESRQL--VSIHPSSS--LAGS-LPEYILFTELLQTSRCYMKTLSVIDP 160
+ KPP + L V IHP S+ G + +I++ + ++TS+ ++ ++ + P
Sbjct: 1315 LTKPPNCGPGKPLERVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFLHHITNLSP 1370
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 192 (72.6 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 683 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 742
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N DF+ K P+
Sbjct: 743 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPE 798
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 192 (72.6 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 405 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRC 464
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N DF+ K P+
Sbjct: 465 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPE 520
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 193 (73.0 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 699 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRC 758
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N DF+ K P+
Sbjct: 759 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPE 814
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 190 (71.9 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 46/121 (38%), Positives = 65/121 (53%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETS+T+ GI VID GL K + ++ L IS+A A QR GRAGR
Sbjct: 274 IVLATNIAETSLTIDGIDLVIDCGLEKVAVFDSASLMNKLMQKQISKASAVQRAGRAGRL 333
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINA-ATFDFMDKPPKEIES 119
G C R+Y ++DF R ++V +IQ+ + + A A ++ P K E
Sbjct: 334 MHGQCIRLYGKDDFERRPLHSVNDIQQADLLPTLIEAARWGVTALAELPLLELPSKAKEQ 393
Query: 120 R 120
+
Sbjct: 394 Q 394
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 190 (71.9 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LAT IAETS+T+ G++ V+D G ++ + P +GL+ L +S A A QR GRAGR
Sbjct: 269 VVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRL 328
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPPKEI-- 117
G CYR++ E D + + PEI + ++ A+ ++D PP+
Sbjct: 329 GPGTCYRLWPEHDQQALLAADPPEILIADLAPLALDLAHWGVSDPASLAWLDPPPRGALE 388
Query: 118 ESRQLV 123
E+R L+
Sbjct: 389 EARNLL 394
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N DF+ K P+
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPE 799
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 192 (72.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG VK+K+ + +L++ IS+A A QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRC 743
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPPK 115
G C+R++S F+ M + PE+ R +N DF+ K P+
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPE 799
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 186 (70.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI+ V+DSGL + TG+ L+ I+Q+ A QR GRAGR
Sbjct: 267 VVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRL 326
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDKPPKEI--E 118
G C R+YSE ++ PE+ T+ + +++ PP +
Sbjct: 327 EPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGAQPSDLAWLNLPPSSAFAQ 386
Query: 119 SRQLV 123
++QL+
Sbjct: 387 AQQLL 391
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 186 (70.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI+ V+DSGL + TG+ L+ I+Q+ A QR GRAGR
Sbjct: 267 VVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRL 326
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFMDKPPKEI--E 118
G C R+YSE ++ PE+ T+ + +++ PP +
Sbjct: 327 EPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGAQPSDLAWLNLPPSSAFAQ 386
Query: 119 SRQLV 123
++QL+
Sbjct: 387 AQQLL 391
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 184 (69.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I +TNIAETSIT+ GI YV+DSG KQ+ ++P T L IS++ A QR+GRAGR
Sbjct: 298 VIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRT 357
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPP 114
G +R+Y+E+ + M + +I + + N F F +PP
Sbjct: 358 MRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPP 412
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 181 (68.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAE+S+TVP +KYVID LV+Q T L++T S+ QR GRAGR
Sbjct: 402 IILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRV 461
Query: 61 AEGFCYRMYSEEDFRRMNKN-TVPEIQRT 88
++GFCYR+ + + N ++PE+ R+
Sbjct: 462 SKGFCYRLVTRHFWENEIPNFSIPEMLRS 490
Score = 34 (17.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 110 MDKPPKEIESRQLVSIHPSSSLAGS 134
+++ P++ R LV+ S S +GS
Sbjct: 1147 VNENPQDWHERMLVAASVSLSASGS 1171
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 176 (67.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+L+TNIAET +T+P + VID+G+ ++ ++ L L T +S+A A QR+GRAGR
Sbjct: 963 IVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRV 1022
Query: 61 AEGFCYRMYSE--EDFRRMNKNTVPEIQRTN 89
EG CY ++S+ D + ++ T PEI R N
Sbjct: 1023 QEGICYHLFSKFKHDTQFLSYQT-PEILRLN 1052
Score = 39 (18.8 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 10/56 (17%), Positives = 29/56 (51%)
Query: 123 VSIHPSSSLAGSLPEYILFTELLQTSRC--YMKTLSVIDPAWITEMVPGYAAQHRI 176
VS++ S L +++ +T ++ ++R Y+ +++ + M+ G ++R+
Sbjct: 1302 VSVNNRSELPNMPSKFVAYTNMMSSTRASEYVNETTMVTLRQLL-MMCGLKVENRV 1356
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 187 (70.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 45/115 (39%), Positives = 65/115 (56%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAETSITV + +VIDSG +K+K+ + + +L+ IS+A A QR GRAGR
Sbjct: 595 IILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGRC 654
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXX-XXXXXXXEINAATFDFMDKPP 114
G C+ ++S F+ M + PE++R +N DF+ K P
Sbjct: 655 RPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAP 709
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 171 (65.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 539 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 598
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 599 QPGHCYHLYNGLRASLLDDYQLPEILRT 626
Score = 40 (19.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 118 ESRQLVSIHPSSSLAGSLP---EYILFTELLQTSRCYMKTLSVIDP 160
+S LVSIHP S ++++ ++TS Y+ + + P
Sbjct: 854 KSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSP 899
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 171 (65.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 540 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 599
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 600 QPGHCYHLYNGLRASLLDDYQLPEILRT 627
Score = 40 (19.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 118 ESRQLVSIHPSSSLAGSLP---EYILFTELLQTSRCYMKTLSVIDP 160
+S LVSIHP S ++++ ++TS Y+ + + P
Sbjct: 855 KSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSP 900
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 27 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 86
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 87 QPGHCYHLYNGLRASLLDDYQLPEILRT 114
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 162 (62.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL TNIAE+SITVP + YVID L K K + L++T S+A QR GR GR
Sbjct: 425 IILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRL 484
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQR 87
G YRM ++ ++R M + +PE+ R
Sbjct: 485 RSGRVYRMVNKHFYQREMPEFGIPEMLR 512
Score = 51 (23.0 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 106 TFDFMDKPPKEIESRQLVSIHPSSSLAGSLPEYILFTELLQT-SRCYMKTLSV 157
T + D PP+ E R L + PSS ++G+ ++L+T ++C + + V
Sbjct: 999 TEQYGDLPPRVFECR-LAMVQPSSVVSGNNRWSTAANDMLKTVAQCGLIDIEV 1050
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 168 (64.2 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 41/89 (46%), Positives = 53/89 (59%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
II ATNIAETSIT+ + VIDSG VKQ + L + T S+A QR GRAGR
Sbjct: 867 IICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRV 926
Query: 61 AEGFCYRMYSEE-DFRRMNKNTVPEIQRT 88
+G CY++Y+ + + M T PE+ RT
Sbjct: 927 KKGICYKLYTRGFEEKGMLGQTPPEVLRT 955
Score = 44 (20.5 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/47 (19%), Positives = 28/47 (59%)
Query: 118 ESRQLVSIHPSSSLAGSLPE-----YILFTELLQTSRCYMKTLSVID 159
++ Q + IHPSS++ + P ++ + + ++T++ +++ + I+
Sbjct: 1202 QNNQRLFIHPSSTMFVNSPNASRCTFVAYEQKVETTKPFLRNCTPIN 1248
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 171 (65.3 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 527 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 586
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 587 QPGHCYHLYNGLRASLLDDYQLPEILRT 614
Score = 36 (17.7 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 122 LVSIHPSSSLAGSLP---EYILFTELLQTSRCYMKTLSVIDP 160
LV+IHP S ++++ ++TS Y+ + + P
Sbjct: 846 LVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSP 887
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 183 (69.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 46/134 (34%), Positives = 64/134 (47%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETSIT+P VID+G K L + SQA+ QR GRAGR
Sbjct: 876 VVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRV 935
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT---NXXXXXXXXXXXEINAATFDFMDKPPKEI 117
G CY +Y++E F M K +PEI+RT N +N +D P K
Sbjct: 936 TAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSS 995
Query: 118 ESRQLVSIHPSSSL 131
+ +H +L
Sbjct: 996 LDKANQFLHEIGAL 1009
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 183 (69.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 46/134 (34%), Positives = 64/134 (47%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++++TNIAETSIT+P VID+G K L + SQA+ QR GRAGR
Sbjct: 876 VVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRV 935
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT---NXXXXXXXXXXXEINAATFDFMDKPPKEI 117
G CY +Y++E F M K +PEI+RT N +N +D P K
Sbjct: 936 TAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSS 995
Query: 118 ESRQLVSIHPSSSL 131
+ +H +L
Sbjct: 996 LDKANQFLHEIGAL 1009
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 182 (69.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 727 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 787 QSGFAYHLFPRSRLEKMVPFQVPEILRT 814
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 727 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 787 QSGFAYHLFPRSRLEKMVPFQVPEILRT 814
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 727 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 787 QSGFAYHLFPRSRLEKMVPFQVPEILRT 814
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 750 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 809
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 810 QSGFAYHLFPRSRLEKMVPFQVPEILRT 837
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 758 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 817
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 818 QSGFAYHLFPRSRLEKMVPFQVPEILRT 845
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 753 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 812
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 813 QSGFAYHLFPRSRLEKMAPFQVPEILRT 840
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 753 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 812
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 813 QSGFAYHLFPRSRLEKMAPFQVPEILRT 840
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 755 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 814
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 815 QSGFAYHLFPRSRLEKMVPFQVPEILRT 842
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSITV I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 755 IVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 814
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 815 QSGFAYHLFPRSRLEKMVPFQVPEILRT 842
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 165 (63.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/89 (41%), Positives = 55/89 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAE+S+TVP +KYVID L + T L+++ S+ QR GRAGR
Sbjct: 447 IILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAGRV 506
Query: 61 AEGFCYRMYSEEDF--RRMNKNTVPEIQR 87
++G+CYR+ +DF + + +PE+ R
Sbjct: 507 SKGYCYRLV-HKDFWDNSIPNHVIPEMLR 534
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 107 FDFMDKPPKEIESRQLVSIHPSSSLA-GSLPEY-ILFTELLQT 147
F F +P +EI +R+L P +++ +P Y L+ + LQ+
Sbjct: 762 FTF-GQPDEEIATRELAGKDPKTTIVLKHIPPYGFLYHQQLQS 803
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 181 (68.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 699 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 758
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 759 QSGFAYHLFPRSRLEKMVPFQVPEILRT 786
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 171 (65.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 661 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 720
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 721 QPGHCYHLYNGLRASLLDDYQLPEILRT 748
Score = 36 (17.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 122 LVSIHPSSSLAGSLP---EYILFTELLQTSRCYMKTLSVIDP 160
LV+IHP S ++++ ++TS Y+ + + P
Sbjct: 980 LVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSP 1021
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 727 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 787 QSGFAYHLFPRSRLEKMVPFQVPEILRT 814
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 755 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 814
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 815 QSGFAYHLFPRSRLEKMVPFQVPEILRT 842
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 178 (67.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 2 ILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGREA 61
I++TNIAETS+TV G+++V+DSG VK+ L+ +S++ A QR GRAGR
Sbjct: 431 IVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTG 490
Query: 62 EGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEI-NAATFDFMDKPPKEIESR 120
G C+R+Y+ E + PEI R + + F F++ P E +
Sbjct: 491 PGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQ 550
Query: 121 QLVSIHPSSSLA 132
++++ +L+
Sbjct: 551 TILALKQHCALS 562
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 179 (68.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 43/87 (49%), Positives = 53/87 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+IL+TNIAE+SITVP IKYVID L K P T LQ+ SQA QR GRAGR
Sbjct: 448 VILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRV 507
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQ 86
+ G YRM S E + + + +PE+Q
Sbjct: 508 SSGRAYRMVSREFYDIHLPEYGIPEMQ 534
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 178 (67.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 39/88 (44%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+I+ATNIAETSIT+ + YVIDSG K+ ++P L + +S+A A QR GRAGR
Sbjct: 942 VIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRV 1001
Query: 61 AEGFCYRMYSEEDFRR-MNKNTVPEIQR 87
G C+ +Y+ F + M VPE+ R
Sbjct: 1002 KPGHCFSLYTRHRFEKLMRPYQVPEMLR 1029
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 176 (67.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETS T+ I +V+DSGL K++ + T + L+ +S+A QR GRAGR
Sbjct: 727 IVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 787 QSGFAYHLFPRSRLEKMVPFQVPEILRT 814
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 163 (62.4 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+++ATN+AETSIT+ I V+D+G VK+ ++ + L+ T S A QR GRAGR
Sbjct: 941 VVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAGRV 1000
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQR 87
G CY++Y+ + +M + PE++R
Sbjct: 1001 QAGECYKLYTRKLESQMAERPEPEMRR 1027
Score = 41 (19.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 123 VSIHPSSSLAGSL-----PEYILFTELLQTSRCYMKTLS 156
V +HPSS+L S ++ + ++ TS+ +++ L+
Sbjct: 1283 VFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLT 1321
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 162 (62.1 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGR- 59
I+L+TNIAETSIT+ + YVIDS VK K H L + Q ++ QR GRAGR
Sbjct: 1009 IVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRAGRV 1068
Query: 60 EAEGFCYRMYSEEDFRRMNKNTVPEIQR 87
+G CY M S + + + + + E++R
Sbjct: 1069 RKDGVCYHMVSRDRYNTLEEFQLSEMRR 1096
Score = 41 (19.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 125 IHPSSSLAGSLPE------YILFTELLQTSRCYMKTLSVI 158
+HPSS + E +++F E +T ++KT++ I
Sbjct: 1345 LHPSSIVYNLFQELNPKENWVIFEEKFKTKLTFIKTITRI 1384
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 173 (66.0 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 549 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 608
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 609 QPGHCYHLYNSLRASLLDDYQLPEILRT 636
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 173 (66.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 41/90 (45%), Positives = 58/90 (64%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTS--ISQAQAWQRTGRAG 58
I++ATNIAETSIT+ + YVID G +K+ TH T ++ +T+ +S A A QR GRAG
Sbjct: 570 IVIATNIAETSITIDDVVYVIDGGKIKE-THFD-TQNNIRTMTAEWVSIANAKQRKGRAG 627
Query: 59 REAEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
R + G CY +Y+ ++ +PEIQRT
Sbjct: 628 RVSPGKCYHLYNGLRASLLDNYQLPEIQRT 657
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 171 (65.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 461 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 520
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 521 QPGHCYHLYNGLRASLLDDYQLPEILRT 548
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 173 (66.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSG K++ + T + L+ +S++ QR GRAGR
Sbjct: 770 IVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRC 829
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 830 QSGFAYHLFPRSRLDKMPTYQVPEILRT 857
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 173 (66.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAETSIT+ I +V+DSG K++ + T + L+ +S++ QR GRAGR
Sbjct: 770 IVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRC 829
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
GF Y ++ +M VPEI RT
Sbjct: 830 QSGFAYHLFPRSRLDKMPTYQVPEILRT 857
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 518 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 577
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 578 QPGHCYHLYNGLRASLLDDYQLPEILRT 605
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 533 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 592
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 593 QPGHCYHLYNGLRASLLDDYQLPEILRT 620
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+LATNIAE+SIT+ + YV+D G K+ ++ + L + IS+A A QR GRAGR
Sbjct: 563 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRV 622
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CYR+Y + + + +PEI RT
Sbjct: 623 QAGVCYRLYPKVIYDAFPQYQLPEIIRT 650
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + YVID G +K+ + + +S+A A QR GRAGR
Sbjct: 547 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 606
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 607 QPGHCYHLYNGLRASLLDDYQLPEILRT 634
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 172 (65.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I+L+TNIAETS+T+ +V+D GL+K+K ++ L + +S+A A QR GRAGR
Sbjct: 813 IVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRV 872
Query: 61 AEGFCYRMYSEEDFR-RMNKNTVPEIQR 87
G C +Y+ ++ + VPEIQR
Sbjct: 873 MPGVCIHLYTSYRYQYHILAQPVPEIQR 900
>TAIR|locus:2043413 [details] [associations]
symbol:AT2G47680 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0019243 "methylglyoxal catabolic process to D-lactate"
evidence=RCA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 GO:GO:0005524
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC005309 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 EMBL:AB493597
IPI:IPI00519204 PIR:C84918 PIR:T00416 RefSeq:NP_182290.1
UniGene:At.36329 ProteinModelPortal:O22243 SMR:O22243 PaxDb:O22243
PRIDE:O22243 EnsemblPlants:AT2G47680.1 GeneID:819381
KEGG:ath:AT2G47680 GeneFarm:1818 TAIR:At2g47680
HOGENOM:HOG000082976 InParanoid:O22243 OMA:AYVIDSC PhylomeDB:O22243
ProtClustDB:CLSN2683720 Genevestigator:O22243 GO:GO:0008026
Uniprot:O22243
Length = 1015
Score = 167 (63.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 46/134 (34%), Positives = 67/134 (50%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
+ILATNIAE+S+T+P + YVIDS Q P D +Q+ +S++QA QR GR GR
Sbjct: 324 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRT 383
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEI------QRTNXXXXXXXXXXXEINAATFDFMDKP- 113
+G YR+ F ++ ++ P I Q+ + NA MD P
Sbjct: 384 CDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDPPD 443
Query: 114 PKEIES--RQLVSI 125
P ++ R L+SI
Sbjct: 444 PDVVDDALRMLLSI 457
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 168 (64.2 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IILA+NIAETS+T+P + +V+D G + + + T + + ++++A QR GRAGR
Sbjct: 941 IILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQTKSKAMQRQGRAGRT 1000
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEINAATFDFM----DKPPKE 116
EG Y +YSE+ + M + +PE+ + + + DF+ PP
Sbjct: 1001 QEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSVKGFGFRDSVADFLAAAISPPPPS 1060
Query: 117 IESRQLVSIHPSSSLA 132
+ + S+ +LA
Sbjct: 1061 VVQDAVNSLKAMDALA 1076
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 166 (63.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
I++ATNIAETSIT+ + +VID G +K+ + + +S+A A QR GRAGR
Sbjct: 528 IVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRV 587
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRT 88
G CY +Y+ ++ +PEI RT
Sbjct: 588 QPGHCYHLYNGLRASLLDDYQLPEILRT 615
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 163 (62.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
IIL+TNIAE+S+TVP +KYVID L + T L+++ S+ QR GRAGR
Sbjct: 168 IILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRV 227
Query: 61 AEGFCYRMYSEEDF--RRMNKNTVPEIQR 87
+ G+CYR+ +DF + + VPE+ R
Sbjct: 228 SRGYCYRLV-HKDFWDNSIPDHVVPEMLR 255
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/115 (33%), Positives = 58/115 (50%)
Query: 1 IILATNIAETSITVPGIKYVIDSGLVKQKTHHPGTGLDVLQVTSISQAQAWQRTGRAGRE 60
++LATNIAETS+T+ GI+ V+D + P TGL L +SQA QR GRAGR
Sbjct: 268 VVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRL 327
Query: 61 AEGFCYRMYSEEDFRRMNKNTVPEIQRTNXXXXXXXXXXXEIN-AATFDFMDKPP 114
G + ++E R + PEI +++ + A ++D+PP
Sbjct: 328 EPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPP 382
WARNING: HSPs involving 42 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 182 171 0.00090 108 3 11 22 0.41 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 292
No. of states in DFA: 598 (64 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.47u 0.07s 14.54t Elapsed: 00:00:15
Total cpu time: 14.50u 0.08s 14.58t Elapsed: 00:00:16
Start: Thu Aug 15 12:00:12 2013 End: Thu Aug 15 12:00:28 2013
WARNINGS ISSUED: 2