Query psy17761
Match_columns 92
No_of_seqs 100 out of 253
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 22:12:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ly8_A Budding yeast chaperone 99.9 3.7E-25 1.3E-29 154.8 5.9 58 27-85 58-115 (121)
2 2hue_C Histone H4; mini beta s 99.9 2E-24 7E-29 140.9 6.0 64 20-84 13-77 (84)
3 1id3_B Histone H4; nucleosome 99.9 1.2E-23 3.9E-28 142.3 6.3 64 20-84 31-95 (102)
4 2l5a_A Histone H3-like centrom 99.9 3.6E-23 1.2E-27 157.9 5.0 62 22-84 166-228 (235)
5 2yfw_B Histone H4, H4; cell cy 99.8 1.4E-21 4.9E-26 131.6 6.3 64 20-84 32-96 (103)
6 1tzy_D Histone H4-VI; histone- 99.8 1.6E-21 5.6E-26 131.2 6.5 64 20-84 32-96 (103)
7 3b0c_T CENP-T, centromere prot 99.8 1.7E-21 5.8E-26 133.3 6.7 65 20-85 10-75 (111)
8 1ku5_A HPHA, archaeal histon; 99.7 1.8E-18 6E-23 108.7 6.2 59 21-80 10-69 (70)
9 1f1e_A Histone fold protein; a 99.7 6.5E-18 2.2E-22 121.7 6.7 64 20-84 85-149 (154)
10 1f1e_A Histone fold protein; a 99.7 1.2E-16 4.1E-21 115.2 7.0 66 21-87 8-75 (154)
11 1taf_A TFIID TBP associated fa 99.6 1.4E-15 4.7E-20 97.0 7.0 60 21-81 6-65 (68)
12 1b67_A Protein (histone HMFA); 99.5 4.7E-14 1.6E-18 87.5 6.1 61 21-82 6-67 (68)
13 1taf_B TFIID TBP associated fa 99.5 1.1E-13 3.7E-18 88.7 6.5 60 20-80 9-69 (70)
14 4dra_A Centromere protein S; D 99.5 4.1E-14 1.4E-18 98.0 4.4 58 24-82 35-95 (113)
15 3b0b_B CENP-S, centromere prot 99.4 9E-14 3.1E-18 95.2 4.7 58 24-82 27-87 (107)
16 1n1j_A NF-YB; histone-like PAI 99.3 4E-12 1.4E-16 83.3 7.7 67 18-85 8-78 (93)
17 3v9r_A MHF1, uncharacterized p 99.3 1.5E-12 5.3E-17 86.7 4.7 49 33-82 32-80 (90)
18 3vh5_A CENP-S; histone fold, c 99.2 8.5E-12 2.9E-16 89.1 4.8 49 33-82 39-87 (140)
19 3b0c_W CENP-W, centromere prot 99.0 9E-10 3.1E-14 70.0 6.3 61 21-82 8-70 (76)
20 2hue_B Histone H3; mini beta s 98.9 3.8E-09 1.3E-13 68.6 6.9 54 30-84 22-75 (77)
21 1jfi_B DR1 protein, transcript 98.8 1.9E-08 6.5E-13 73.9 7.8 67 18-85 15-84 (179)
22 2byk_B Chrac-14; nucleosome sl 98.8 2E-08 6.9E-13 69.8 7.0 67 18-85 9-79 (128)
23 3nqj_A Histone H3-like centrom 98.7 2.3E-08 8E-13 65.6 6.6 54 31-85 25-78 (82)
24 1n1j_B NF-YC; histone-like PAI 98.7 2.1E-08 7.3E-13 66.3 6.2 61 21-82 23-85 (97)
25 2f8n_G Core histone macro-H2A. 98.6 4.9E-08 1.7E-12 67.4 6.2 57 23-80 29-86 (120)
26 2nqb_C Histone H2A; nucleosome 98.6 5.7E-08 1.9E-12 67.3 6.3 56 24-80 31-87 (123)
27 1tzy_A Histone H2A-IV; histone 98.6 1E-07 3.5E-12 66.6 6.3 56 24-80 33-89 (129)
28 2f8n_K Histone H2A type 1; nuc 98.6 1.2E-07 4.2E-12 67.9 6.1 57 23-80 51-108 (149)
29 4g92_C HAPE; transcription fac 98.5 2.9E-07 9.8E-12 63.0 7.5 71 10-82 34-107 (119)
30 1jfi_A Transcription regulator 98.5 6.8E-08 2.3E-12 64.1 4.2 59 22-81 16-76 (98)
31 1id3_C Histone H2A.1; nucleoso 98.5 1.4E-07 4.8E-12 66.0 5.8 57 23-80 32-89 (131)
32 2yfv_A Histone H3-like centrom 98.5 1.8E-07 6.3E-12 63.1 5.9 49 31-80 50-98 (100)
33 1tzy_C Histone H3; histone-fol 98.5 2.7E-07 9.1E-12 65.4 6.8 54 30-84 81-134 (136)
34 3nqu_A Histone H3-like centrom 98.5 4E-07 1.4E-11 64.9 6.8 53 31-84 83-135 (140)
35 1f66_C Histone H2A.Z; nucleoso 98.4 4.3E-07 1.5E-11 63.3 6.3 57 24-81 35-93 (128)
36 3r45_A Histone H3-like centrom 98.4 2.9E-07 1E-11 66.7 5.2 52 31-83 99-150 (156)
37 2jss_A Chimera of histone H2B. 98.3 1E-06 3.4E-11 64.4 6.0 57 23-80 112-170 (192)
38 2nqb_D Histone H2B; nucleosome 98.2 4.1E-06 1.4E-10 58.7 6.2 58 23-81 40-98 (123)
39 1tzy_B Histone H2B; histone-fo 98.1 6.9E-06 2.4E-10 57.7 6.2 57 24-81 44-101 (126)
40 2byk_A Chrac-16; nucleosome sl 97.9 2.5E-05 8.5E-10 55.0 5.6 60 22-82 24-86 (140)
41 2jss_A Chimera of histone H2B. 97.6 0.00013 4.6E-09 53.1 6.7 61 21-82 7-69 (192)
42 1h3o_B Transcription initiatio 97.4 0.00063 2.2E-08 43.8 6.5 64 18-82 6-71 (76)
43 2l5a_A Histone H3-like centrom 96.6 0.0049 1.7E-07 47.0 6.2 57 32-89 35-93 (235)
44 4dra_E Centromere protein X; D 88.6 1.3 4.5E-05 28.7 5.7 58 21-79 16-77 (84)
45 3b0b_C CENP-X, centromere prot 85.3 2.2 7.5E-05 27.3 5.4 58 21-79 12-73 (81)
46 3ksy_A SOS-1, SON of sevenless 83.3 2.4 8.1E-05 37.0 6.3 58 22-81 109-168 (1049)
47 3kw6_A 26S protease regulatory 79.7 2 6.9E-05 25.5 3.4 32 50-82 42-73 (78)
48 3k1j_A LON protease, ATP-depen 78.5 7.3 0.00025 31.3 7.3 50 31-81 312-374 (604)
49 1g8p_A Magnesium-chelatase 38 78.0 5.8 0.0002 28.3 6.0 49 33-82 267-322 (350)
50 3aji_B S6C, proteasome (prosom 78.0 4 0.00014 24.4 4.4 34 50-84 40-73 (83)
51 1lv7_A FTSH; alpha/beta domain 76.8 3.4 0.00011 28.7 4.3 35 49-84 220-254 (257)
52 3uk6_A RUVB-like 2; hexameric 76.7 9.4 0.00032 27.6 6.8 48 33-81 278-329 (368)
53 1bh9_B TAFII28; histone fold, 76.4 9.2 0.00031 24.6 6.0 62 20-82 19-82 (89)
54 3vlf_B 26S protease regulatory 74.7 3.9 0.00013 25.2 3.8 34 50-84 40-73 (88)
55 1h3o_A Transcription initiatio 72.2 5.3 0.00018 25.3 4.0 39 25-63 15-53 (75)
56 2dzn_B 26S protease regulatory 71.8 4.1 0.00014 24.6 3.3 32 50-82 37-68 (82)
57 2krk_A 26S protease regulatory 70.6 3.7 0.00013 25.4 3.0 34 49-83 49-82 (86)
58 2ly8_A Budding yeast chaperone 70.1 7.4 0.00025 26.6 4.6 40 31-70 24-63 (121)
59 3h4m_A Proteasome-activating n 61.6 8.9 0.0003 26.7 3.8 33 49-82 226-258 (285)
60 2v1u_A Cell division control p 61.5 19 0.00065 25.5 5.6 50 32-82 221-276 (387)
61 2lf3_A Effector protein hopab3 60.2 28 0.00096 23.5 5.9 46 22-88 37-82 (107)
62 3tl8_B Effector protein hopab2 60.0 23 0.0008 24.2 5.5 46 22-88 43-88 (117)
63 1ixz_A ATP-dependent metallopr 57.0 7.5 0.00026 26.8 2.7 30 49-79 224-253 (254)
64 2qz4_A Paraplegin; AAA+, SPG7, 56.6 7.1 0.00024 26.6 2.5 34 48-82 216-249 (262)
65 1iy2_A ATP-dependent metallopr 56.2 7.7 0.00026 27.4 2.7 30 49-79 248-277 (278)
66 3bos_A Putative DNA replicatio 55.5 26 0.00089 22.9 5.1 46 33-80 193-241 (242)
67 2lf6_A Effector protein hopab1 54.3 28 0.00097 23.2 5.1 47 21-88 25-71 (101)
68 3or8_A Transcription elongatio 52.8 4 0.00014 29.8 0.7 55 33-88 75-130 (197)
69 2r62_A Cell division protease 52.4 6.7 0.00023 27.2 1.8 37 49-86 221-257 (268)
70 3f9v_A Minichromosome maintena 48.5 10 0.00035 30.9 2.6 31 50-81 556-586 (595)
71 3few_X Colicin S4; cell lysis, 48.3 26 0.00089 29.1 4.9 56 33-88 312-367 (505)
72 3d6i_A Monothiol glutaredoxin- 44.7 6.5 0.00022 23.3 0.7 37 14-51 71-109 (112)
73 2qby_A CDC6 homolog 1, cell di 43.8 65 0.0022 22.6 6.0 50 32-82 217-272 (386)
74 2es7_A Q8ZP25_salty, putative 43.7 5.2 0.00018 26.3 0.1 49 14-63 86-137 (142)
75 4b4t_I 26S protease regulatory 41.1 25 0.00086 28.3 3.8 34 48-82 390-423 (437)
76 4b4t_H 26S protease regulatory 40.0 24 0.00083 28.6 3.6 33 49-82 418-450 (467)
77 3v9r_B MHF2, uncharacterized p 40.0 29 0.001 22.6 3.3 29 31-59 19-47 (88)
78 2dhr_A FTSH; AAA+ protein, hex 39.3 37 0.0013 27.2 4.5 34 49-83 239-272 (499)
79 4b4t_J 26S protease regulatory 39.3 28 0.00096 27.6 3.8 34 48-82 356-389 (405)
80 3f8t_A Predicted ATPase involv 39.2 22 0.00077 29.4 3.3 30 50-80 452-481 (506)
81 2r44_A Uncharacterized protein 37.7 32 0.0011 24.6 3.6 31 51-82 267-297 (331)
82 1col_A Colicin A; antibacteria 37.7 59 0.002 24.0 5.1 53 36-88 20-72 (204)
83 2xp1_A SPT6; transcription, IW 37.5 14 0.00048 26.2 1.6 52 33-88 71-122 (178)
84 4b4t_L 26S protease subunit RP 35.2 36 0.0012 27.0 3.8 33 49-82 390-422 (437)
85 3fes_A ATP-dependent CLP endop 34.7 42 0.0014 21.7 3.5 34 49-83 85-118 (145)
86 2chg_A Replication factor C sm 34.4 74 0.0025 20.1 4.6 41 34-80 181-224 (226)
87 1a87_A Colicin N; bacteriocin, 34.4 59 0.002 25.6 4.8 52 36-87 138-189 (321)
88 1fnn_A CDC6P, cell division co 33.9 1.2E+02 0.0043 21.4 6.6 52 33-85 214-277 (389)
89 2qby_B CDC6 homolog 3, cell di 33.7 98 0.0033 22.0 5.6 48 32-82 217-270 (384)
90 3nbx_X ATPase RAVA; AAA+ ATPas 33.4 55 0.0019 26.2 4.6 46 33-80 225-283 (500)
91 4b4t_M 26S protease regulatory 33.3 34 0.0012 27.1 3.4 35 49-84 390-424 (434)
92 2lhi_A Calmodulin, serine/thre 31.9 32 0.0011 22.6 2.6 25 62-87 21-45 (176)
93 4b4t_K 26S protease regulatory 31.3 46 0.0016 26.3 3.8 33 49-82 382-414 (428)
94 1o13_A Probable NIFB protein; 30.9 5.8 0.0002 26.4 -1.3 38 19-57 86-123 (136)
95 1in4_A RUVB, holliday junction 30.4 70 0.0024 23.3 4.5 35 50-85 219-253 (334)
96 2ygg_A Sodium/hydrogen exchang 30.3 81 0.0028 19.7 4.1 31 33-63 3-33 (70)
97 1rdu_A Conserved hypothetical 30.1 10 0.00035 23.9 -0.2 32 19-51 72-103 (116)
98 3kp1_E D-ornithine aminomutase 29.8 85 0.0029 21.5 4.5 50 32-86 12-61 (121)
99 3fh2_A Probable ATP-dependent 29.1 59 0.002 20.9 3.5 34 49-83 85-118 (146)
100 2ce7_A Cell division protein F 28.8 53 0.0018 26.2 3.8 34 49-83 224-257 (476)
101 1rh1_A Colicin B; FEPA, cytoto 27.5 1.2E+02 0.0042 25.2 5.8 26 63-88 357-382 (511)
102 3dml_A Putative uncharacterize 26.4 17 0.00059 23.8 0.5 40 12-55 69-110 (116)
103 2yx6_A Hypothetical protein PH 25.8 10 0.00036 24.1 -0.7 33 19-52 73-105 (121)
104 3f3q_A Thioredoxin-1; His TAG, 25.7 11 0.00036 22.6 -0.6 35 14-49 72-108 (109)
105 1k6k_A ATP-dependent CLP prote 25.4 75 0.0026 20.0 3.5 31 50-81 84-114 (143)
106 2di4_A Zinc protease, cell div 24.7 1.3E+02 0.0044 22.0 5.0 57 23-83 147-203 (238)
107 1u5t_A Appears to BE functiona 24.3 1.6E+02 0.0055 21.7 5.5 23 67-90 127-150 (233)
108 1khy_A CLPB protein; alpha hel 24.2 75 0.0026 20.0 3.3 31 49-80 86-116 (148)
109 2lv7_A Calcium-binding protein 23.2 92 0.0031 18.9 3.5 43 31-86 27-69 (100)
110 3tco_A Thioredoxin (TRXA-1); d 22.9 13 0.00043 21.4 -0.7 36 14-50 70-108 (109)
111 1gh2_A Thioredoxin-like protei 22.8 19 0.00065 21.0 0.1 33 14-47 69-103 (107)
112 3gnj_A Thioredoxin domain prot 22.4 16 0.00055 21.2 -0.3 38 13-51 70-110 (111)
113 3zri_A CLPB protein, CLPV; cha 22.3 90 0.0031 21.3 3.6 31 50-81 103-134 (171)
114 3m9j_A Thioredoxin; oxidoreduc 21.9 12 0.00043 21.5 -0.8 34 14-48 68-103 (105)
115 2c9o_A RUVB-like 1; hexameric 21.5 75 0.0026 24.3 3.3 29 52-81 408-436 (456)
116 3pm8_A PFCDPK2, calcium-depend 21.4 1.8E+02 0.006 19.0 6.1 32 54-86 59-90 (197)
117 3aps_A DNAJ homolog subfamily 21.2 22 0.00075 21.2 0.2 38 14-51 70-113 (122)
118 2y1q_A CLPC N-domain, negative 21.2 1E+02 0.0035 19.4 3.5 33 49-82 83-115 (150)
119 1eo1_A Hypothetical protein MT 20.7 13 0.00046 23.6 -1.0 31 20-51 76-106 (124)
120 3cuq_A Vacuolar-sorting protei 20.2 2.7E+02 0.0091 20.6 6.2 54 36-90 70-137 (234)
No 1
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.7e-25 Score=154.83 Aligned_cols=58 Identities=48% Similarity=0.620 Sum_probs=55.5
Q ss_pred hhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 27 VEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 27 ar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
.++||||||+++|+|+|++||+|+++|++||++||+||+||||| ++||++|||+||+.
T Consensus 58 ~~gGvkRIS~~iy~e~r~vl~~~l~~i~rdav~yaehA~RKTVt-a~DV~~Alkr~G~~ 115 (121)
T 2ly8_A 58 VPRGSKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVT-SLDVVYALKRQGRT 115 (121)
T ss_dssp CCCCSSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBC-HHHHHHHHHHTTCG
T ss_pred CccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCc-HHHHHHHHHhCCCc
Confidence 45679999999999999999999999999999999999999999 99999999999983
No 2
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=99.90 E-value=2e-24 Score=140.95 Aligned_cols=64 Identities=52% Similarity=0.658 Sum_probs=61.4
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+|+|++|+++| ++|||+++|+++++++++|+++|++||++||+||+||||+ ++||.+|||++|.
T Consensus 13 ~~~I~Riar~~Gv~rIs~da~~~l~~~l~~~~~~I~~dA~~~a~ha~RKTvt-~~DV~~Alk~~g~ 77 (84)
T 2hue_C 13 KPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVT-AMDVVYALKRQGR 77 (84)
T ss_dssp HHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHTTTTCE
T ss_pred HHHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCc-HHHHHHHHHHcCC
Confidence 48999999996 9999999999999999999999999999999999999999 9999999999984
No 3
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=99.89 E-value=1.2e-23 Score=142.35 Aligned_cols=64 Identities=42% Similarity=0.563 Sum_probs=61.5
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+|+|++|++++ ++|||+++|+++++++++|+++|++||++||+||+||||+ ++||.+||+++|.
T Consensus 31 ~~~I~Rlar~~Gv~rIS~da~~~l~~~le~fi~~I~~dA~~~a~HakRKTVt-~~DV~~ALkr~g~ 95 (102)
T 1id3_B 31 KPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVT-SLDVVYALKRQGR 95 (102)
T ss_dssp HHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCc-HHHHHHHHHHcCC
Confidence 48999999985 9999999999999999999999999999999999999999 9999999999984
No 4
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.6e-23 Score=157.92 Aligned_cols=62 Identities=44% Similarity=0.509 Sum_probs=58.5
Q ss_pred hhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 22 SVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 22 aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+|++|+++| |+|||+++|+|++++|+.|+++|++||++||+||+||||| ++||++|||++|.
T Consensus 166 ~~~RlaRrgGVkRIS~~iyeelr~vLe~fle~IirdAv~yaeHA~RKTVt-a~DV~~ALKr~gr 228 (235)
T 2l5a_A 166 SDEEDGDKGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVT-SLDVVYALKRQGR 228 (235)
T ss_dssp TCCTTSCCTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCC-HHHHHHHHHHHHH
T ss_pred cHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCc-HHHHHHHHHhcCC
Confidence 467788775 9999999999999999999999999999999999999999 9999999999983
No 5
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=99.84 E-value=1.4e-21 Score=131.63 Aligned_cols=64 Identities=44% Similarity=0.574 Sum_probs=61.0
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+++|++|++++ ++|||+++|++++++|++|+++|++||++||+||+||||+ ++||.+||+++|.
T Consensus 32 ~~~I~Rlar~~G~~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktvt-~~DV~~Alr~~g~ 96 (103)
T 2yfw_B 32 KPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVT-SLDVVYALKRQGR 96 (103)
T ss_dssp HHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCc-HHHHHHHHHHcCC
Confidence 38999999886 9999999999999999999999999999999999999999 9999999999984
No 6
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=99.84 E-value=1.6e-21 Score=131.22 Aligned_cols=64 Identities=52% Similarity=0.658 Sum_probs=61.4
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+|+|++|++++ ++|||+++|++++++|++|+++|++||++||+||+||||+ ++||.+||+++|.
T Consensus 32 ~~~I~Rlar~~G~~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktIt-~~DV~~Alr~~g~ 96 (103)
T 1tzy_D 32 KPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVT-AMDVVYALKRQGR 96 (103)
T ss_dssp HHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHHHcCC
Confidence 38999999986 9999999999999999999999999999999999999999 9999999999984
No 7
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=99.84 E-value=1.7e-21 Score=133.35 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=62.3
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
+++|++|+++| ++|||+++|+++++++++|+++|++||++||+|||||||+ ++||++|++++|.-
T Consensus 10 ~a~I~Ri~r~~g~~rIS~~a~~~l~e~l~~f~~~v~~da~~~A~HA~RKTV~-~eDV~lalrr~g~~ 75 (111)
T 3b0c_T 10 SSLIKQIFSHYVKTPVTRDAYKIVEKCSERYFKQISSDLEAYSQHAGRKTVE-MADVELLMRRQGLV 75 (111)
T ss_dssp CHHHHHHHHHHHCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHHHCCCc
Confidence 58999999997 9999999999999999999999999999999999999999 99999999999853
No 8
>1ku5_A HPHA, archaeal histon; histone fold, DNA binding protein; 2.30A {Pyrococcus horikoshii} SCOP: a.22.1.2
Probab=99.75 E-value=1.8e-18 Score=108.71 Aligned_cols=59 Identities=20% Similarity=0.173 Sum_probs=54.4
Q ss_pred chhHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 21 PSVVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 21 ~aIRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
+.|++|.+. |++|||++++++++++++.|+++|++||..||+|||||||+ ++||.+|++
T Consensus 10 a~v~Rl~r~~g~~ris~~a~~~l~e~~~~~~~~v~~dA~~~a~hakRkTI~-~~DV~lA~~ 69 (70)
T 1ku5_A 10 APVDRLIRKAGAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVK-VEDIKLAIK 69 (70)
T ss_dssp HHHHHHHHHTTCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEC-HHHHHHHHT
T ss_pred HHHHHHHHHcCcceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHH
Confidence 566665555 69999999999999999999999999999999999999999 999999986
No 9
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=99.72 E-value=6.5e-18 Score=121.74 Aligned_cols=64 Identities=14% Similarity=0.036 Sum_probs=58.4
Q ss_pred CchhHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 20 PPSVVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 20 ~~aIRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
.+.|+||.+. |++|||+++|++++++|++|++.|+++|++||+|++||||+ ++||.+|++++=+
T Consensus 85 ~a~V~Ri~k~~g~~RVS~~A~~~l~~~le~f~~~I~~~A~~~a~ha~RKTIt-~eDV~~Al~~~~~ 149 (154)
T 1f1e_A 85 RATVRRILKRAGIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQ-GEDVEKAITYSMP 149 (154)
T ss_dssp HHHHHHHHHHTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHHSG
T ss_pred ccHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHhcCC
Confidence 3667776665 59999999999999999999999999999999999999999 9999999999754
No 10
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=99.66 E-value=1.2e-16 Score=115.16 Aligned_cols=66 Identities=8% Similarity=-0.069 Sum_probs=59.4
Q ss_pred chhHHhhh-c-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCc
Q psy17761 21 PSVVWRVE-V-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPC 87 (92)
Q Consensus 21 ~aIRrlar-~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~ 87 (92)
+.|+||.+ + |++|||+++++++++++++|++.|+++|++||+|+|||||+ ++||..|+..+|...+
T Consensus 8 a~V~Riik~~lg~~rVS~dA~~~l~~~l~~f~~~i~~~A~~~a~ha~RKTv~-a~DV~~a~~~lg~~~v 75 (154)
T 1f1e_A 8 AAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLM-EEHLKALADVLMVEGV 75 (154)
T ss_dssp HHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEC-HHHHHHHHHHHTCTTS
T ss_pred cHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHHhcccccC
Confidence 56666554 4 69999999999999999999999999999999999999999 9999999999886554
No 11
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=99.61 E-value=1.4e-15 Score=97.01 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=57.2
Q ss_pred chhHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 21 PSVVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 21 ~aIRrlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
+=.|+|+..|++|+|+++-..+.+.++.|.++|++||+.|++|||||||+ ++||.+|++.
T Consensus 6 ~i~~iLk~~G~~~~~~~v~~~L~e~~~ry~~~il~dA~~~a~HAgrktv~-~eDVkLAi~~ 65 (68)
T 1taf_A 6 VIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTID-LDDVRLATEV 65 (68)
T ss_dssp HHHHHHHHTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHH
T ss_pred HHHHHHHHCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHh
Confidence 44689999999999999999999999999999999999999999999999 9999999975
No 12
>1b67_A Protein (histone HMFA); DNA binding protein; 1.48A {Methanothermus fervidus} SCOP: a.22.1.2 PDB: 1hta_A 1a7w_A 1b6w_A 1bfm_A
Probab=99.49 E-value=4.7e-14 Score=87.51 Aligned_cols=61 Identities=20% Similarity=0.131 Sum_probs=55.2
Q ss_pred chhHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 21 PSVVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 21 ~aIRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..|++|.+. |..|||.++++.+.++++.|++.+..||..+|.|++||||+ ++||.+|++++
T Consensus 6 a~v~Ri~k~~~~~ris~~A~~~l~~a~e~fi~~l~~~A~~~a~~~kRkTI~-~~Di~~A~~~l 67 (68)
T 1b67_A 6 APIGRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIK-AEDIELARKMF 67 (68)
T ss_dssp HHHHHHHHHTTCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHGGGG
T ss_pred cHHHHHHhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHhc
Confidence 446666555 59999999999999999999999999999999999999999 99999999864
No 13
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=99.46 E-value=1.1e-13 Score=88.66 Aligned_cols=60 Identities=22% Similarity=0.210 Sum_probs=55.4
Q ss_pred CchhHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 20 PPSVVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 20 ~~aIRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
+-+|+++++. |++|+|+++.++|.+.++.++.+|+++|+.++.|+||||++ ++||.+|||
T Consensus 9 ~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI~qeA~kfmrHakRk~Lt-~~DI~~Alk 69 (70)
T 1taf_B 9 AESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLS-VRDIDMSLK 69 (70)
T ss_dssp HHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeec-HHHHHHHHc
Confidence 3566666666 89999999999999999999999999999999999999999 999999996
No 14
>4dra_A Centromere protein S; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_A
Probab=99.46 E-value=4.1e-14 Score=98.02 Aligned_cols=58 Identities=28% Similarity=0.247 Sum_probs=54.7
Q ss_pred HHhhhccccc---chhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 24 VWRVEVESSV---FAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 24 Rrlar~GakR---IS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
|++.+.|++| +|+++..++.+++.+|+++|++|+..||+|||||||+ ++||.++++|+
T Consensus 35 rIvke~gaer~~~vS~~ai~aL~El~~~~~~~ia~Dl~~fAkHAgRkTI~-~eDV~La~Rr~ 95 (113)
T 4dra_A 35 CLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTIN-TEDVKLLARRS 95 (113)
T ss_dssp HHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHTTTC
T ss_pred HHHHHHHHHcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccC-HHHHHHHHHhC
Confidence 6677778888 9999999999999999999999999999999999999 99999999875
No 15
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=99.43 E-value=9e-14 Score=95.18 Aligned_cols=58 Identities=28% Similarity=0.278 Sum_probs=53.2
Q ss_pred HHhhhccc---ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 24 VWRVEVES---SVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 24 Rrlar~Ga---kRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
|++.+.|+ .|+|+++...+.+++..|+++|++|+..||+|||||||+ ++||.++++|+
T Consensus 27 rI~~~~g~~~~~~vs~~~i~aL~E~~~~~~~~ia~Da~~fA~HAgRkTI~-~eDV~La~Rrn 87 (107)
T 3b0b_B 27 CLCQDVAEDKGVLFSKQTVAAISEITFRQCENFARDLEMFARHAKRSTIT-SEDVKLLARRS 87 (107)
T ss_dssp HHHHHHHHHHTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHTTTC
T ss_pred HHHHHHhhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCcCC-HHHHHHHHHhC
Confidence 44555576 699999999999999999999999999999999999999 99999999875
No 16
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=99.34 E-value=4e-12 Score=83.28 Aligned_cols=67 Identities=15% Similarity=0.031 Sum_probs=59.8
Q ss_pred CCC-chhHHhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 18 SGP-PSVVWRVEVE---SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 18 ~~~-~aIRrlar~G---akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
..| ..|++|.+.. ..|||.++...+.++.+.|+..+..+|..+|+|++||||+ .+||..|++++|.-
T Consensus 8 ~LP~a~i~ri~K~~~~~~~~is~dA~~~l~~a~e~Fi~~l~~~A~~~a~~~kRkTI~-~~Dv~~Al~~l~F~ 78 (93)
T 1n1j_A 8 YLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN-GEDILFAMSTLGFD 78 (93)
T ss_dssp CCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHTTCG
T ss_pred cCChhHHHHHHHHhCCccceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHHcCcH
Confidence 445 5577776664 4899999999999999999999999999999999999999 99999999999864
No 17
>3v9r_A MHF1, uncharacterized protein YOL086W-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.5e-12 Score=86.72 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=47.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.+|+++..++.+.+..|++++++|+..||+|||||||+ ++||.++++|+
T Consensus 32 ~vs~~~i~aL~e~~~~~~~~ia~Dl~~fA~HAgRkTI~-~eDV~L~~Rrn 80 (90)
T 3v9r_A 32 KYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVN-KSDLMLYLRKQ 80 (90)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHTTTC
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHhC
Confidence 49999999999999999999999999999999999999 99999999874
No 18
>3vh5_A CENP-S; histone fold, chromosome segregation, DNA binding, nucleus, binding protein; 2.40A {Gallus gallus} PDB: 3vh6_A
Probab=99.22 E-value=8.5e-12 Score=89.14 Aligned_cols=49 Identities=31% Similarity=0.325 Sum_probs=47.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.||+++..+|.+++.+|+++|++|+..||+|||||||+ ++||.++++|+
T Consensus 39 ~vS~~ai~aL~El~~~~~e~ia~DLe~FAkHAGRKTI~-~eDVkLa~Rrn 87 (140)
T 3vh5_A 39 LFSKQTVAAISEITFRQAENFARDLEMFARHAKRSTIT-SEDVKLLARRS 87 (140)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHhC
Confidence 49999999999999999999999999999999999999 99999999875
No 19
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=98.99 E-value=9e-10 Score=70.00 Aligned_cols=61 Identities=11% Similarity=-0.067 Sum_probs=53.9
Q ss_pred chhHHhhh-c-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 21 PSVVWRVE-V-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 21 ~aIRrlar-~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..|.++.+ . +..+||.++.+.+....++|++.|..+|...|.+++||||+ ++||..|++..
T Consensus 8 A~V~rI~K~~~p~~~is~~A~~~i~~~~~~Fi~~la~eA~~~a~~~~rKTI~-~~dI~~A~~~l 70 (76)
T 3b0c_W 8 GTLRKIIKKHKPHLRLAANTDLLVHLSFLLFLHRLAEEARTNAFENKSKIIK-PEHTIAAAKVI 70 (76)
T ss_dssp HHHHHHHHHHCTTCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSBC-HHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHH
Confidence 34555544 5 67799999999999999999999999999999999999999 99999999864
No 20
>2hue_B Histone H3; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis}
Probab=98.91 E-value=3.8e-09 Score=68.60 Aligned_cols=54 Identities=19% Similarity=0.102 Sum_probs=51.3
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 30 ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 30 GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
|..|+++++..++.++.|.|+..+.+|+...|.||||+||+ +.|+.+|.+--|.
T Consensus 22 ~~~R~q~~Al~aLQea~Eaylv~lfeda~l~A~HAkRvTi~-~kDiqLa~rirg~ 75 (77)
T 2hue_B 22 TDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIM-PKDIQLARRIRGE 75 (77)
T ss_dssp SSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCc-HhhHHHHHHHhCc
Confidence 67899999999999999999999999999999999999999 9999999977664
No 21
>1jfi_B DR1 protein, transcription regulator NC2 beta chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=98.78 E-value=1.9e-08 Score=73.93 Aligned_cols=67 Identities=9% Similarity=-0.118 Sum_probs=59.5
Q ss_pred CCC--chhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 18 SGP--PSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 18 ~~~--~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
.+| +--|+++..+ ..|||.|+.+.+.++.++|+..|...|...|+|++||||+ ++||..||+.+|..
T Consensus 15 ~LP~A~V~RImK~alp~~rISkDA~~al~ec~~eFI~~LtseA~e~a~~~~RKTI~-~eDVl~Al~~LgF~ 84 (179)
T 1jfi_B 15 TIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS-PEHVIQALESLGFG 84 (179)
T ss_dssp CCCHHHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHTTG
T ss_pred hcCHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHHhcChH
Confidence 566 3345666666 4899999999999999999999999999999999999999 99999999999864
No 22
>2byk_B Chrac-14; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_B
Probab=98.76 E-value=2e-08 Score=69.80 Aligned_cols=67 Identities=9% Similarity=-0.057 Sum_probs=58.8
Q ss_pred CCC-chhHHhhh-cc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 18 SGP-PSVVWRVE-VE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 18 ~~~-~aIRrlar-~G--akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
++| .-|++|.+ .+ ..+||.++...+.++.+.|+..|...|...|++.+||||+ .+||..|++..|.-
T Consensus 9 ~LP~A~I~rImK~~~pd~~~iS~dA~~~l~ka~e~FI~~lt~~A~~~a~~~kRKTI~-~~Dv~~Al~~l~f~ 79 (128)
T 2byk_B 9 NLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTIT-AKDILQTLTELDFE 79 (128)
T ss_dssp --CCSHHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC-HHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHhCcccceECHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHHcCcH
Confidence 344 45666666 56 8999999999999999999999999999999999999999 99999999998853
No 23
>3nqj_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.10A {Homo sapiens}
Probab=98.75 E-value=2.3e-08 Score=65.57 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=49.8
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
..|+++++..++.++.|.|+..+.+|+.-+|.||||+||. +.|+.+|.+--|.+
T Consensus 25 ~~R~q~~Al~aLQea~E~ylv~Lfeda~lcAiHAkRvTi~-~kDiqLa~rirg~~ 78 (82)
T 3nqj_A 25 DFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF-PKDVQLARRIRGLE 78 (82)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHC--
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCc-HHHHHHHHHHcccc
Confidence 5699999999999999999999999999999999999999 99999999777754
No 24
>1n1j_B NF-YC; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=98.74 E-value=2.1e-08 Score=66.26 Aligned_cols=61 Identities=10% Similarity=0.039 Sum_probs=55.3
Q ss_pred chhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 21 PSVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 21 ~aIRrlar~G--akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.-|+++-+.+ +.|||.++...+..++|.|+..++..|...|++.+||||+ ..||..|++..
T Consensus 23 arIkrImK~~~~~~~is~eA~~~laka~E~Fi~~l~~~A~~~a~~~krktI~-~~di~~Av~~~ 85 (97)
T 1n1j_B 23 ARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQ-RNDIAMAITKF 85 (97)
T ss_dssp HHHHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHTTC
T ss_pred HHHHHHHccCccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-HHHHHHHHhcC
Confidence 3476766665 7999999999999999999999999999999999999999 99999999764
No 25
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} SCOP: a.22.1.1 PDB: 1u35_C
Probab=98.65 E-value=4.9e-08 Score=67.40 Aligned_cols=57 Identities=12% Similarity=-0.013 Sum_probs=53.3
Q ss_pred hHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 23 VVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 23 IRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
-|+|++.+ ++|||+++-..+..+||.+.++|++.|..+|.|++||||+ ++|+.+|++
T Consensus 29 ~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~~rIt-p~hi~lAI~ 86 (120)
T 2f8n_G 29 LRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVT-PRHILLAVA 86 (120)
T ss_dssp HHHHHHHSSSCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEc-HHHHHHHHh
Confidence 36677777 9999999999999999999999999999999999999999 999999986
No 26
>2nqb_C Histone H2A; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_C*
Probab=98.64 E-value=5.7e-08 Score=67.34 Aligned_cols=56 Identities=11% Similarity=-0.064 Sum_probs=52.1
Q ss_pred HHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 24 VWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 24 Rrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
|+|++. +++|||+++-..+..+||.+.++|++.|..+|.|++||||+ ++|+.+|++
T Consensus 31 R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krIt-p~hi~lAI~ 87 (123)
T 2nqb_C 31 RLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII-PRHLQLAIR 87 (123)
T ss_dssp HHHHHTTSCSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-HHHHHHHHh
Confidence 556665 59999999999999999999999999999999999999999 999999986
No 27
>1tzy_A Histone H2A-IV; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_A 1hq3_A 2aro_A 2hio_A 3c9k_A 3azg_C 3a6n_C 3an2_C 3av1_C 3av2_C 3ayw_C 3aze_C 3azf_C 3afa_C 3azh_C 3azi_C 3azj_C 3azk_C 3azl_C 3azm_C ...
Probab=98.58 E-value=1e-07 Score=66.60 Aligned_cols=56 Identities=11% Similarity=-0.059 Sum_probs=51.9
Q ss_pred HHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 24 VWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 24 Rrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
|+|++. +++|||+++-..+..+||.+..+|+..|..+|.|++|+||+ ++|+.+|++
T Consensus 33 R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krIt-p~hi~lAI~ 89 (129)
T 1tzy_A 33 RLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRII-PRHLQLAIR 89 (129)
T ss_dssp HHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEc-HHHHHHHHh
Confidence 556554 69999999999999999999999999999999999999999 999999986
No 28
>2f8n_K Histone H2A type 1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Mus musculus} SCOP: a.22.1.1
Probab=98.55 E-value=1.2e-07 Score=67.91 Aligned_cols=57 Identities=12% Similarity=-0.063 Sum_probs=52.7
Q ss_pred hHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 23 VVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 23 IRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
-|+|++. +++|||+++-..+..+||.+..+|++.|..+|.+++|+||+ ++||.+|++
T Consensus 51 ~R~LK~~~~a~RVs~~A~VyLAAVLEYL~aEILelAgn~A~~~krkrIt-prhI~lAI~ 108 (149)
T 2f8n_K 51 HRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRII-PRHLQLAIR 108 (149)
T ss_dssp HHHHHHTTSCSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHHccccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCc-HHHHHHHHh
Confidence 3666665 59999999999999999999999999999999999999999 999999986
No 29
>4g92_C HAPE; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Aspergillus nidulans} PDB: 4g91_C*
Probab=98.54 E-value=2.9e-07 Score=63.01 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=62.7
Q ss_pred cCCccCCCCCC-chhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 10 AHGLRTPVSGP-PSVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 10 ~hg~~~~v~~~-~aIRrlar~G--akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.+-++++ +.| .-|+++.+.+ +.+||.++..-+..+++.|+..++..|...|+..+||||+ ..||..|++..
T Consensus 34 ~~d~k~~-~lPvaRIkrImK~d~~~~~is~eA~v~la~a~E~Fi~~L~~~A~~~a~~~krktI~-~~di~~Av~~~ 107 (119)
T 4g92_C 34 NHDYKIH-QLPLARIKKVMKADPEVKMISAEAPILFAKGCDVFITELTMRAWIHAEDNKRRTLQ-RSDIAAALSKS 107 (119)
T ss_dssp CCCSSCC-SSCHHHHHHHHHTSTTCCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHTTC
T ss_pred ccccccC-CCCHHHHHHHHhhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccC-HHHHHHHHhcC
Confidence 3445666 677 5588888876 9999999999999999999999999999999999999999 99999999753
No 30
>1jfi_A Transcription regulator NC2 alpha chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=98.54 E-value=6.8e-08 Score=64.10 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=50.6
Q ss_pred hhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 22 SVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 22 aIRrlar~G--akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
=|+++-+.+ +.|||.++...+..++|.|+++++..|...|++.+||||+ ..|+..|++.
T Consensus 16 RIkrimK~~~~~~~vs~~A~v~la~a~E~Fi~el~~~A~~~a~~~krktI~-~~di~~av~~ 76 (98)
T 1jfi_A 16 RIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMT-TSHLKQCIEL 76 (98)
T ss_dssp HHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBC-HHHHHTTCC-
T ss_pred HHHHHHHcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeec-HHHHHHHHhc
Confidence 476777776 8999999999999999999999999999999999999999 9999988865
No 31
>1id3_C Histone H2A.1; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=98.53 E-value=1.4e-07 Score=66.04 Aligned_cols=57 Identities=11% Similarity=-0.067 Sum_probs=52.2
Q ss_pred hHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 23 VVWRVEV-ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 23 IRrlar~-GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
-|+|++. +++|||+++-..+..+||.+..+|+..|..+|.|++|+||+ ++|+.+|++
T Consensus 32 ~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krIt-p~hI~lAI~ 89 (131)
T 1id3_C 32 HRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRII-PRHLQLAIR 89 (131)
T ss_dssp HHHHHTTCSCSEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEc-HHHHHHHHh
Confidence 3555554 59999999999999999999999999999999999999999 999999986
No 32
>2yfv_A Histone H3-like centromeric protein CSE4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140} PDB: 2yfw_A
Probab=98.51 E-value=1.8e-07 Score=63.14 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=46.5
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
.-|+++++..++.++.|.|+..+.+|+...|-||||+||. +.|+.+|.+
T Consensus 50 ~~R~q~~Al~ALQeaaEayLv~Lfeda~l~A~HAkRvTi~-~kDiqLa~r 98 (100)
T 2yfv_A 50 PLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIM-RKDMQLARR 98 (100)
T ss_dssp -CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-HHHHHHHHH
Confidence 5699999999999999999999999999999999999999 999999974
No 33
>1tzy_C Histone H3; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_C 1hq3_C 2aro_C 2f8n_A 2hio_C 3av1_A 3lel_A 3afa_A 3azi_A 3azj_A 3azk_A 3azl_A 3azm_A 3azn_A 2cv5_A* 1u35_A* 2nqb_A 2io5_B 2pyo_A* 3c9k_C ...
Probab=98.51 E-value=2.7e-07 Score=65.35 Aligned_cols=54 Identities=19% Similarity=0.106 Sum_probs=51.0
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 30 ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 30 GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
|.-|+++++..+|.++.|.||..+.+|+..+|-||+|+||. +.||.+|.+--|.
T Consensus 81 ~~~R~q~~Al~aLQeaaEayLv~Lfeda~l~A~HAkRvTi~-~kDiqLa~rirg~ 134 (136)
T 1tzy_C 81 TDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM-PKDIQLARRIRGE 134 (136)
T ss_dssp TTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHHTC
T ss_pred hhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCc-HHhHHHHHHHhCc
Confidence 56899999999999999999999999999999999999999 9999999977664
No 34
>3nqu_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.50A {Homo sapiens} PDB: 3an2_A
Probab=98.46 E-value=4e-07 Score=64.89 Aligned_cols=53 Identities=17% Similarity=0.102 Sum_probs=49.7
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
..|+++++..+|.++.|.||..+.+|+..+|.||+|+||. +.||.+|.+--|.
T Consensus 83 ~~Rfq~~Al~ALQEAaEayLv~LFEdanlcAiHAkRVTIm-~kDiqLArrirg~ 135 (140)
T 3nqu_A 83 DFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF-PKDVQLARRIRGL 135 (140)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHHC-
T ss_pred cceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc-HHHHHHHHHhccc
Confidence 5699999999999999999999999999999999999999 9999999977664
No 35
>1f66_C Histone H2A.Z; nucleosome, chromatin, histone variant, protein DNA interaction, nucleoprotein, supercoiled DNA, complex (nucleosome core/DNA); 2.60A {Homo sapiens} SCOP: a.22.1.1
Probab=98.44 E-value=4.3e-07 Score=63.32 Aligned_cols=57 Identities=11% Similarity=-0.023 Sum_probs=52.6
Q ss_pred HHhhhcc-c-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 24 VWRVEVE-S-SVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 24 Rrlar~G-a-kRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
|+|++.+ + .|||+++-..+..+||.+..+|+..|..+|.+++||+|+ ++|+.+|++.
T Consensus 35 R~Lk~~~~a~~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krIt-prhi~lAI~n 93 (128)
T 1f66_C 35 RHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT-PRHLQLAIRG 93 (128)
T ss_dssp HHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEC-HHHHHHHHHH
T ss_pred HHHHHcccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEc-HHHHHHHHhc
Confidence 6777777 6 499999999999999999999999999999999999999 9999999863
No 36
>3r45_A Histone H3-like centromeric protein A; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=98.42 E-value=2.9e-07 Score=66.66 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=48.7
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
..|+++++..+|.++.|.||..+.+|+..+|.||+|+||. +.||.+|.+--|
T Consensus 99 ~lRfqs~Al~ALQEAaEayLV~LFEdanLcAiHAkRVTIm-~kDIqLArrIrg 150 (156)
T 3r45_A 99 DFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF-PKDVQLARRIRG 150 (156)
T ss_dssp CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEC-HHHHHHHHHHHH
T ss_pred cceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc-HHHHHHHHHHcc
Confidence 4699999999999999999999999999999999999999 999999986544
No 37
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=98.31 E-value=1e-06 Score=64.38 Aligned_cols=57 Identities=11% Similarity=-0.024 Sum_probs=52.0
Q ss_pred hHHhhhc-cc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 23 VVWRVEV-ES-SVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 23 IRrlar~-Ga-kRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
-|+|++. ++ .|||+++-..+..+||.+..+|++.|..+|.|++||||+ ++|+.+|.+
T Consensus 112 ~R~lk~~~~a~~Rv~~~A~vyLaavLEyl~~eIlelA~n~a~~~~~~~I~-p~~i~lAi~ 170 (192)
T 2jss_A 112 KRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRIT-PRHLQLAIR 170 (192)
T ss_dssp HHHHHHTTCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-HHHHHHHHH
T ss_pred HHHHHhcCccccccccChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccC-HHHHHHHHh
Confidence 4566665 56 699999999999999999999999999999999999999 999999986
No 38
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=98.16 E-value=4.1e-06 Score=58.67 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=52.1
Q ss_pred hHHhhhcccc-cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 23 VVWRVEVESS-VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 23 IRrlar~Gak-RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
-|.|++.+.. +||..+...+..++++++|.|+.+|..++.|.+|+|++ ..||..|.+-
T Consensus 40 yKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~Tit-sreIqtAvrL 98 (123)
T 2nqb_D 40 YTVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTIT-SREIQTAVRL 98 (123)
T ss_dssp HHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEC-HHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC-HHHHHHHHHH
Confidence 3556666755 99999999999999999999999999999999999999 9999999864
No 39
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=98.09 E-value=6.9e-06 Score=57.70 Aligned_cols=57 Identities=11% Similarity=0.056 Sum_probs=51.5
Q ss_pred HHhhhcccc-cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 24 VWRVEVESS-VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 24 Rrlar~Gak-RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
|.|++.+.. +||..+...+..++++++|.|+.+|..++.|.+|+||+ ..||..|.+-
T Consensus 44 KVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~Tit-sreIqtAvrL 101 (126)
T 1tzy_B 44 KVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTIT-SREIQTAVRL 101 (126)
T ss_dssp HHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHH
T ss_pred HHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHH
Confidence 555556755 89999999999999999999999999999999999999 9999999864
No 40
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=97.85 E-value=2.5e-05 Score=55.01 Aligned_cols=60 Identities=5% Similarity=-0.057 Sum_probs=51.6
Q ss_pred hhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCcccccchhHHHHHHhh
Q psy17761 22 SVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYP-RHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 22 aIRrlar~G--akRIS~~iy~elr~vLe~fle~Iirdavtya-eHA~RKTVt~~~DV~~alkr~ 82 (92)
=|++|-+.. +.+||.++..-+..+++.|+..++..|...| ...+||||+ ..||..|+...
T Consensus 24 RIKrIMK~dpdv~~Is~eA~vliakA~ElFI~~Lt~~A~~~a~~~~kRKtI~-~~Dl~~AV~~~ 86 (140)
T 2byk_A 24 RVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALK-YEHLSQVVNKN 86 (140)
T ss_dssp -----CCSSSSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEC-HHHHHHHHHTC
T ss_pred HHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-HHHHHHHHhcC
Confidence 467777776 8899999999999999999999999999999 999999999 99999999753
No 41
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=97.63 E-value=0.00013 Score=53.07 Aligned_cols=61 Identities=7% Similarity=0.022 Sum_probs=52.7
Q ss_pred chhHHhhhc-c-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 21 PSVVWRVEV-E-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 21 ~aIRrlar~-G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..|.+..++ + -.+||.++...+...+.++++.|+.+|..++.+.+|+|++ ..||..|.+..
T Consensus 7 ~yi~kvLkqv~p~~~iS~~Am~~m~s~v~di~~rIa~eA~~L~~~~~r~Tit-~~eIq~Avrl~ 69 (192)
T 2jss_A 7 SYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTIS-AREIQTAVRLI 69 (192)
T ss_dssp HHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCC-HHHHHHHHHHH
T ss_pred HHHHHHHcccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHh
Confidence 345554444 4 4789999999999999999999999999999999999999 99999998753
No 42
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=97.36 E-value=0.00063 Score=43.80 Aligned_cols=64 Identities=17% Similarity=0.095 Sum_probs=55.4
Q ss_pred CCCchhHHhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 18 SGPPSVVWRVEV--ESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 18 ~~~~aIRrlar~--GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..+..+.-|.+. +-..+.+++-+-+-++..+|+++|+..|+.+|+|-+=+|+. +.||.+.|+|.
T Consensus 6 l~k~~L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKhR~s~~le-~kDvql~Ler~ 71 (76)
T 1h3o_B 6 LTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLE-VKDVQLHLERQ 71 (76)
T ss_dssp SCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEC-HHHHHHHHHHH
T ss_pred ccHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-HHHHHHHHHhh
Confidence 344555555555 36788999999999999999999999999999999999999 99999999985
No 43
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.0049 Score=46.98 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=50.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC--CCCccc
Q psy17761 32 SVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR--PHPCTV 89 (92)
Q Consensus 32 kRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g--~~~~~~ 89 (92)
-|+.+.+..++.++.|.||-.+..|+.-+|-||+|-|+. +-|+.+|.+--| ..|..+
T Consensus 35 lRfqs~Al~ALQEAaEayLV~LFEd~nLcaiHAkRVTim-~kDiqLarrirg~~~~p~ev 93 (235)
T 2l5a_A 35 LRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIM-KKDMQLARRIRGQFLVPRGS 93 (235)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSGGG-TTHHHHHHTSSCSCCCCSSS
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhhhHHHHhcccccccc-hhhHHHHHHHhhccCCchhH
Confidence 489999999999999999999999999999999999999 999999986655 335443
No 44
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=88.58 E-value=1.3 Score=28.65 Aligned_cols=58 Identities=10% Similarity=-0.019 Sum_probs=46.7
Q ss_pred chhHHhhhcc----cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHH
Q psy17761 21 PSVVWRVEVE----SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRA 79 (92)
Q Consensus 21 ~aIRrlar~G----akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~al 79 (92)
.-|-+|-... -.|||+++-.-+.++++.|..+-+.-|+..++-.+-.+|. .+|..-.+
T Consensus 16 ~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le-~e~LEki~ 77 (84)
T 4dra_E 16 ELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVD-VDQLEKVL 77 (84)
T ss_dssp HHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-HHHHHHHH
Confidence 3455555554 4599999999999999999999888888888877778899 88877655
No 45
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=85.31 E-value=2.2 Score=27.27 Aligned_cols=58 Identities=10% Similarity=-0.001 Sum_probs=45.3
Q ss_pred chhHHhhhcc----cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHH
Q psy17761 21 PSVVWRVEVE----SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRA 79 (92)
Q Consensus 21 ~aIRrlar~G----akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~al 79 (92)
.-|.+|-... -.||++++-+-+.++|+.|..+-+.-|+.-++-.+-..|. .+|..-.+
T Consensus 12 ~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le-~~~LEki~ 73 (81)
T 3b0b_C 12 ETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREAAARAARQAQAEDLEKVD-IEHVEKVL 73 (81)
T ss_dssp HHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEC-HHHHHHHH
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-HHHHHHHH
Confidence 4455555544 5699999999999999999999888888777666777888 88876554
No 46
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=83.34 E-value=2.4 Score=37.00 Aligned_cols=58 Identities=10% Similarity=0.075 Sum_probs=51.0
Q ss_pred hhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 22 SVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 22 aIRrlar~G--akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
-|.++. .| +.||++.+-.-+..|||....+|++=|-.++...+++.|+ ..++..|+..
T Consensus 109 ~~~~~l-~~~~~~r~~~~~~~y~~avleyl~~~~l~la~~~~~~~~~~~i~-p~~~~~ai~~ 168 (1049)
T 3ksy_A 109 KIHPLL-KEVLGYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEIT-KQDIKVAMCA 168 (1049)
T ss_dssp HHHHHH-HHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC-HHHHHHHHHH
T ss_pred HHHHHh-hcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHcCCceec-CccccccccC
Confidence 355555 55 9999999888899999999999999999999999999999 9999988853
No 47
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=79.73 E-value=2 Score=25.53 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
+++++++|..++-..++..|+ .+|+..|+++.
T Consensus 42 i~~l~~eA~~~a~~~~~~~i~-~~d~~~Al~~v 73 (78)
T 3kw6_A 42 VKGVCTEAGMYALRERRVHVT-QEDFEMAVAKV 73 (78)
T ss_dssp HHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHH
Confidence 778888998888888999999 99999999875
No 48
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=78.50 E-value=7.3 Score=31.33 Aligned_cols=50 Identities=18% Similarity=0.033 Sum_probs=41.2
Q ss_pred cccchhhHHHHHHHHH-------------HHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 31 SSVFAGLIYEETRGVL-------------KVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 31 akRIS~~iy~elr~vL-------------e~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
...++.++.+++.... ...++++++.|..+|+..+++.|+ .+||..|+++
T Consensus 312 ~~~ls~eAl~~Li~~~~r~~g~r~~l~~~~R~l~~llr~A~~~A~~~~~~~I~-~edv~~A~~~ 374 (604)
T 3k1j_A 312 IPHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVE-REDVIEAVKM 374 (604)
T ss_dssp SCCBBHHHHHHHHHHHHHTTCSTTEEECCHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhhhhccccccccCHHHHHHHHHHHHHHHHhcCccccc-HHHHHHHHHh
Confidence 3468888887777654 345778999999999999999999 9999999975
No 49
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=78.02 E-value=5.8 Score=28.30 Aligned_cols=49 Identities=8% Similarity=-0.079 Sum_probs=39.4
Q ss_pred cchhhHHHHHHHHHHH-------HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 33 VFAGLIYEETRGVLKV-------VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 33 RIS~~iy~elr~vLe~-------fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.+|+++.+.+...... -+.++++.|.++|.-.+|++|+ .+||..++.-.
T Consensus 267 ~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~~~~~~~v~-~~~v~~a~~~~ 322 (350)
T 1g8p_A 267 EAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVG-RDHLKRVATMA 322 (350)
T ss_dssp BCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCC-HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHcCCCcCC-HHHHHHHHHHH
Confidence 6788887777666543 4667889999999999999999 99999888654
No 50
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B*
Probab=77.99 E-value=4 Score=24.42 Aligned_cols=34 Identities=12% Similarity=0.022 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
++.++++|...|=..++..|+ .+|...|+++..+
T Consensus 40 i~~l~~eA~~~a~~~~~~~i~-~~df~~Al~~~~p 73 (83)
T 3aji_B 40 INSICQESGMLAVRENRYIVL-AKDFEKAYKTVIK 73 (83)
T ss_dssp HHHHHHHHHHGGGTSCCSSBC-HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhccCCcC-HHHHHHHHHHHcc
Confidence 556788888888888889999 9999999998764
No 51
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=76.77 E-value=3.4 Score=28.71 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
-++++++.|..+|...++++|+ .+|+..|++..-.
T Consensus 220 dl~~l~~~a~~~a~~~~~~~i~-~~~~~~a~~~~~~ 254 (257)
T 1lv7_A 220 DLANLVNEAALFAARGNKRVVS-MVEFEKAKDKIMM 254 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCccc-HHHHHHHHHHHhc
Confidence 4667889999999998999999 9999999987643
No 52
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=76.72 E-value=9.4 Score=27.55 Aligned_cols=48 Identities=13% Similarity=-0.083 Sum_probs=39.3
Q ss_pred cchhhHHHHHHHHHH----HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 33 VFAGLIYEETRGVLK----VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 33 RIS~~iy~elr~vLe----~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
.+++++.+.+..... ..+.++++.|..+|...++++|+ .+||..+++.
T Consensus 278 ~~~~~~l~~l~~~~~~G~~r~~~~ll~~a~~~A~~~~~~~It-~~~v~~a~~~ 329 (368)
T 3uk6_A 278 EMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQ-VDDIKRVYSL 329 (368)
T ss_dssp CBCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCCCC-HHHHHHHHHH
Confidence 477887777776665 26677899999999888999999 9999999875
No 53
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=76.35 E-value=9.2 Score=24.57 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=50.5
Q ss_pred CchhHHhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CcccccchhHHHHHHhh
Q psy17761 20 PPSVVWRVEVE-SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAK-RQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 20 ~~aIRrlar~G-akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~-RKTVt~~~DV~~alkr~ 82 (92)
++.|++|.+.= -..+|.++...+.++-|.|+-+|+..|.+..+.-+ +.=+. +.-+..|.+++
T Consensus 19 k~~vKrl~~~~~~~~v~~~v~i~v~glaKvfVgelVE~A~~V~~~~~~~~Pl~-P~HireA~rrl 82 (89)
T 1bh9_B 19 KAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQ-PKHMREAVRRL 82 (89)
T ss_dssp HHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cHHHHHHHHHH
Confidence 47888887763 45799999999999999999999999998887654 44566 88888888774
No 54
>3vlf_B 26S protease regulatory subunit 7 homolog; heat repeat, chaperone, chaperone-protein binding complex; HET: DNA; 3.80A {Saccharomyces cerevisiae} PDB: 4a3v_B*
Probab=74.75 E-value=3.9 Score=25.15 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
+++++++|.-.|=+.++..|+ .+|...|+++.-.
T Consensus 40 l~~l~~eAa~~a~r~~~~~i~-~~df~~Al~~v~~ 73 (88)
T 3vlf_B 40 LRSVCTEAGMFAIRARRKVAT-EKDFLKAVDKVIS 73 (88)
T ss_dssp HHHHHHHHHHHHHHHSCSSBC-HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhccccCC-HHHHHHHHHHHhc
Confidence 667788888788777889999 9999999998643
No 55
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=72.16 E-value=5.3 Score=25.31 Aligned_cols=39 Identities=5% Similarity=-0.027 Sum_probs=32.0
Q ss_pred HhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy17761 25 WRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRH 63 (92)
Q Consensus 25 rlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeH 63 (92)
+.++.|++=+++|+..=+.-+-++.|.+++......++|
T Consensus 15 I~~k~gl~~~~~dv~~~iS~a~qeRLr~llekl~~~a~~ 53 (75)
T 1h3o_A 15 IGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQ 53 (75)
T ss_dssp HHHTTTCCEECTTHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHhcCCCcCChhHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 456778999999999999999999999999999999988
No 56
>2dzn_B 26S protease regulatory subunit 6B homolog; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} PDB: 2dzo_B
Probab=71.85 E-value=4.1 Score=24.57 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
+++++++|.-.|=..++..|+ .+|...|+++.
T Consensus 37 i~~l~~eAa~~ai~~~~~~i~-~~df~~Al~~v 68 (82)
T 2dzn_B 37 IAAIMQEAGLRAVRKNRYVIL-QSDLEEAYATQ 68 (82)
T ss_dssp HHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCcC-HHHHHHHHHHH
Confidence 445666776666666889999 99999999986
No 57
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=70.65 E-value=3.7 Score=25.39 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
=+++++++|.-.|=...+..|+ .+|...|+++..
T Consensus 49 DL~~l~~eAa~~alr~~~~~I~-~~df~~Al~~v~ 82 (86)
T 2krk_A 49 EVKGVCTEAGMYALRERRVHVT-QEDFEMAVAKVM 82 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHc
Confidence 3667888888777777789999 999999998864
No 58
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=70.11 E-value=7.4 Score=26.56 Aligned_cols=40 Identities=5% Similarity=0.034 Sum_probs=36.0
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccc
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGH 70 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt 70 (92)
--|..+.+...+.++.|.||-.+..|+.-.|-||.|-=|+
T Consensus 24 ~lRfq~~Al~ALQeAsEayLV~lFEd~nlcaiHA~~gGvk 63 (121)
T 2ly8_A 24 DLRWQSMAIMALQEASEAYLVGLLEHTNLLALHLVPRGSK 63 (121)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCSS
T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHhHHHHcCCccCcc
Confidence 3589999999999999999999999999999999776555
No 59
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=61.59 E-value=8.9 Score=26.71 Aligned_cols=33 Identities=15% Similarity=0.002 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
-++.+++.|..+|-..++++|+ .+|+..|+++.
T Consensus 226 ~i~~l~~~a~~~a~~~~~~~I~-~~d~~~al~~~ 258 (285)
T 3h4m_A 226 ELKAICTEAGMNAIRELRDYVT-MDDFRKAVEKI 258 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcCC-HHHHHHHHHHH
Confidence 5677889999999888999999 99999999874
No 60
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=61.47 E-value=19 Score=25.55 Aligned_cols=50 Identities=8% Similarity=-0.035 Sum_probs=39.4
Q ss_pred ccchhhHHHHHHHHHH------HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 32 SVFAGLIYEETRGVLK------VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 32 kRIS~~iy~elr~vLe------~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..+++++.+.+..... .++.++++.+..+++..++.+|+ .+|+.-+++..
T Consensus 221 ~~~~~~~~~~l~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~-~~~v~~a~~~~ 276 (387)
T 2v1u_A 221 GVLDPDVVPLCAALAAREHGDARRALDLLRVAGEIAERRREERVR-REHVYSARAEI 276 (387)
T ss_dssp TTBCSSHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHTTCSCBC-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHcCCCCcC-HHHHHHHHHHH
Confidence 3577777777766665 45668888898888888899999 99999888765
No 61
>2lf3_A Effector protein hopab3; type III effector, structural genomics, PSI-biology, protein structure initiative; NMR {Pseudomonas syringae PV}
Probab=60.25 E-value=28 Score=23.45 Aligned_cols=46 Identities=11% Similarity=0.007 Sum_probs=30.6
Q ss_pred hhHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 22 SVVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 22 aIRrlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
|.+.|+++|+. ++.+|.+|+.|+- | +.-+ .+|+..||.-.|.+|.+
T Consensus 37 aL~~L~qqGvd------merLraAle~~i~-----------~--~~pi--P~Di~raL~~VGI~p~i 82 (107)
T 2lf3_A 37 ALQALAQNGIN------MEDLRAALEAYIV-----------W--LRPI--PLDIANALEGVGITPRF 82 (107)
T ss_dssp HHHHHHHHTCC------HHHHHHHHHHHHH-----------T--CCCC--CHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHhCCC------HHHHHHHHHHHHH-----------h--cCCC--CHHHHHHHHcCCCCCCC
Confidence 45555555543 5666666666653 2 1222 79999999999999965
No 62
>3tl8_B Effector protein hopab2; plant immunity, solanum lycopersicum, triggered immunity, bacterial pathogenesis, transferase-LIG complex; HET: TPO; 2.50A {Pseudomonas syringae PV}
Probab=60.02 E-value=23 Score=24.19 Aligned_cols=46 Identities=15% Similarity=0.077 Sum_probs=30.5
Q ss_pred hhHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 22 SVVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 22 aIRrlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
|.+.|+++|+. ++.+|.+|+.|+- | +.-+ .+||.++|.-.|.+|.+
T Consensus 43 AL~~L~qqGvd------merLraAle~~im-----------~--~~pi--P~Di~raL~~VGI~P~i 88 (117)
T 3tl8_B 43 ALRGLVQQGVN------LEHLRTALERHVM-----------Q--RLPI--PLDIGSALQNVGINPSI 88 (117)
T ss_dssp HHHHHHHTTCC------HHHHHHHHHHHHT-----------T--CCCC--CHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHhCCC------HHHHHHHHHHHHH-----------h--cCCC--CHHHHHHHHhCCCCCCC
Confidence 45566666543 5666666666542 2 1222 79999999999999964
No 63
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=56.98 E-value=7.5 Score=26.84 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHH
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRA 79 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~al 79 (92)
-+++++++|..+|...++.+|+ .+|+..|+
T Consensus 224 dl~~~~~~a~~~a~~~~~~~I~-~~dl~~a~ 253 (254)
T 1ixz_A 224 DLENLLNEAALLAAREGRRKIT-MKDLEEAA 253 (254)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCcC-HHHHHHHh
Confidence 4678888998888888889999 99998876
No 64
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=56.62 E-value=7.1 Score=26.61 Aligned_cols=34 Identities=9% Similarity=0.136 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 48 VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 48 ~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.-++++++.|..+|-..++++|+ .+|+..|+++.
T Consensus 216 ~~l~~l~~~a~~~a~~~~~~~i~-~~d~~~a~~~~ 249 (262)
T 2qz4_A 216 ADIANICNEAALHAAREGHTSVH-TLNFEYAVERV 249 (262)
T ss_dssp HHHHHHHHHHHTC--------CC-BCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHh
Confidence 35667888888888888899999 99999999875
No 65
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=56.16 E-value=7.7 Score=27.38 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHH
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRA 79 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~al 79 (92)
-++++++.|..++...++.+|+ .+|+..|+
T Consensus 248 dl~~l~~~a~~~a~~~~~~~I~-~~dl~~a~ 277 (278)
T 1iy2_A 248 DLENLLNEAALLAAREGRRKIT-MKDLEEAA 277 (278)
T ss_dssp HHHHHHHHHHHHHHHTTCCSBC-HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCCcC-HHHHHHHh
Confidence 4677888898888888888999 99998876
No 66
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=55.47 E-value=26 Score=22.94 Aligned_cols=46 Identities=4% Similarity=-0.198 Sum_probs=31.9
Q ss_pred cchhhHHHHHHHHHH---HHHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 33 VFAGLIYEETRGVLK---VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 33 RIS~~iy~elr~vLe---~fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
.+++++.+.+..... ..+.++++.++.++...+ ++|+ .+||..+++
T Consensus 193 ~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~a~~~~-~~It-~~~v~~~l~ 241 (242)
T 3bos_A 193 QLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQ-RKLT-IPFVKEMLR 241 (242)
T ss_dssp CCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHT-CCCC-HHHHHHHHT
T ss_pred CCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhC-CCCc-HHHHHHHhh
Confidence 467777766665543 245567778888886655 4699 999988874
No 67
>2lf6_A Effector protein hopab1; type III effector, structural genomics, PSI-biology, protein structure initiative; NMR {Pseudomonas syringae PV}
Probab=54.32 E-value=28 Score=23.23 Aligned_cols=47 Identities=13% Similarity=0.012 Sum_probs=34.4
Q ss_pred chhHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 21 PSVVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 21 ~aIRrlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
.+.++|+++|+. ++.+|.+|+.|+- | +.-+ ..|+..+|.-.|.+|.+
T Consensus 25 aaL~~L~qqGvd------merLr~Al~~~i~-----------~--~~pi--P~Di~raL~~vGI~p~i 71 (101)
T 2lf6_A 25 EALRRLTQEGVD------MERLRTSLGRYIM-----------S--LEPL--PPDLRRALESVGINPFI 71 (101)
T ss_dssp HHHHHHHHHTCC------HHHHHHHHHHHHS-----------S--SCCC--CHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHhCCC------HHHHHHHHHHHHH-----------h--cCCC--CHHHHHHHHcCCCCCCC
Confidence 577888888865 6677777777652 2 1222 79999999999999964
No 68
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES; 1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A 2l3t_A 3gxw_A 3gxx_A
Probab=52.77 E-value=4 Score=29.78 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=46.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHh-hCCCCcc
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT-SRPHPCT 88 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr-~g~~~~~ 88 (92)
+|.+.-|+.|-+++..|++.+++.+-....|.+-+.-+ .+|+.-.|+. ...||.+
T Consensus 75 ~i~~~~y~DLDElI~~~V~pm~~~v~el~~h~kf~~g~-~~eve~~L~~ek~~nP~~ 130 (197)
T 3or8_A 75 VVEGQRYHDLDQIIVEYLQNKIRLLNELTSNEKFKAGT-KKEVVKFIEDYSKVNPKK 130 (197)
T ss_dssp EETTEEESSHHHHHHHTHHHHHHHHHHHHTSTTEECSC-HHHHHHHHHHHHHHCTTC
T ss_pred EECCeEECCHHHHHHHHHHHHHHHHHHHHhCccccCCC-HHHHHHHHHHHHHhCCCC
Confidence 67778999999999999999999999999999988877 8889888855 4456654
No 69
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=52.37 E-value=6.7 Score=27.17 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHP 86 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~ 86 (92)
-++++++.|..+|...+++.|+ .+|+..++++.-++.
T Consensus 221 dl~~l~~~a~~~a~~~~~~~i~-~~~~~~a~~~~~~~~ 257 (268)
T 2r62_A 221 DLANIINEAALLAGRNNQKEVR-QQHLKEAVERGIAGL 257 (268)
T ss_dssp HHHHHHHHHHHTTSSSCCCSCC-HHHHHTSCTTCCCCC
T ss_pred HHHHHHHHHHHHHHHhccCCcC-HHHHHHHHHHHhhcc
Confidence 4667888999999888899999 999999988765443
No 70
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=48.47 E-value=10 Score=30.86 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=28.2
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
++.+++-|.++|.-.+|.+|+ .+||..|++-
T Consensus 556 l~~lirla~a~A~l~~~~~V~-~~dv~~Ai~l 586 (595)
T 3f9v_A 556 LEALIRISEAYAKMALKAEVT-REDAERAINI 586 (595)
T ss_dssp TTHHHHHHHHHHHTTSSCCSS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCC-HHHHHHHHHH
Confidence 678999999999999999999 9999998864
No 71
>3few_X Colicin S4; cell lysis, Y-RAY, cell killing, immune system; 2.45A {Escherichia coli}
Probab=48.31 E-value=26 Score=29.08 Aligned_cols=56 Identities=11% Similarity=0.008 Sum_probs=35.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
-|-.|+|+++-+.+=+=..+++++...-++-.+=|||.+.+|-.-++.+...||.-
T Consensus 312 EIIsDfgkKItEkyGeKykklAkELAe~aKNFQGKKIRSvdDALaSfEKyksNlnk 367 (505)
T 3few_X 312 EVISDIGNKVGDYLGDAYKSLAREIADDVKNFQGKTIRSYDDAMASLNKVLSNPGF 367 (505)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccCCHHHHHHHHHHHhhChhh
Confidence 34445555554444333344555555445445679999999999999998888763
No 72
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=44.71 E-value=6.5 Score=23.25 Aligned_cols=37 Identities=14% Similarity=0.035 Sum_probs=23.6
Q ss_pred cCCCCCCchhHHhhhcc--cccchhhHHHHHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGLIYEETRGVLKVVLE 51 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~iy~elr~vLe~fle 51 (92)
++.|.+-|.+..+ +.| +.|+.+.-.+++.+.++.++.
T Consensus 71 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 71 LFEISAVPYFIII-HKGTILKELSGADPKEYVSLLEDCKN 109 (112)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEECSCCHHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-ECCEEEEEecCCCHHHHHHHHHHHHh
Confidence 4557788888777 466 677877655555555554443
No 73
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=43.84 E-value=65 Score=22.63 Aligned_cols=50 Identities=6% Similarity=-0.024 Sum_probs=35.3
Q ss_pred ccchhhHHHHHHHHHH------HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 32 SVFAGLIYEETRGVLK------VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 32 kRIS~~iy~elr~vLe------~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.-+++++.+.+..... ..+.++++.+...++..++++|+ .+||..+++..
T Consensus 217 ~~~~~~~~~~l~~~~~~~~G~~r~~~~ll~~a~~~a~~~~~~~i~-~~~v~~a~~~~ 272 (386)
T 2qby_A 217 GVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKDTKVK-EEYVYMAKEEI 272 (386)
T ss_dssp SCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCSSCC-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCccC-HHHHHHHHHHH
Confidence 3566666666655554 23445788888888877888999 99998877654
No 74
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=43.75 E-value=5.2 Score=26.32 Aligned_cols=49 Identities=12% Similarity=0.197 Sum_probs=25.9
Q ss_pred cCCCCCCchhHHhhhcc--cccchhh-HHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGL-IYEETRGVLKVVLENVIRDAVTYPRH 63 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~-iy~elr~vLe~fle~IirdavtyaeH 63 (92)
+|.|.+-|.+..+ +.| +.|+++. -.+++.+.++.++..-..+...--||
T Consensus 86 ~~~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~~~~~~ 137 (142)
T 2es7_A 86 RFNVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDTPAAQETVQLEH 137 (142)
T ss_dssp TTTCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC------------
T ss_pred hcCCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCCchhhc
Confidence 5678888999888 667 7788875 35677777776665544444443333
No 75
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.09 E-value=25 Score=28.35 Aligned_cols=34 Identities=9% Similarity=0.033 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 48 VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 48 ~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.-+++++++|.-+|-..+|..|+ .+|+..|+++.
T Consensus 390 ADI~~l~~eA~~~Air~~~~~It-~eDf~~Al~rv 423 (437)
T 4b4t_I 390 ADIQAMCTEAGLLALRERRMQVT-AEDFKQAKERV 423 (437)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHHH
Confidence 35778999998888888999999 99999999874
No 76
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.04 E-value=24 Score=28.64 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
-++.++++|.-+|-..+|+.|+ .+|+..|+++.
T Consensus 418 DI~~l~~eAa~~Air~~~~~it-~~Df~~Al~kV 450 (467)
T 4b4t_H 418 ELRSVCTEAGMFAIRARRKVAT-EKDFLKAVDKV 450 (467)
T ss_dssp HHHHHHHHHHHHHHHHTCSSBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccC-HHHHHHHHHHH
Confidence 4678899998888888999999 99999999874
No 77
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=39.96 E-value=29 Score=22.63 Aligned_cols=29 Identities=7% Similarity=0.163 Sum_probs=24.4
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHh
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVT 59 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~Iirdavt 59 (92)
-.|||.++...+.++++.|..+-+-.|+.
T Consensus 19 kTrIt~da~~lv~kY~diFVrEAv~Rs~e 47 (88)
T 3v9r_B 19 DMKIADEVVPMIQKYLDIFIDEAVLRSLQ 47 (88)
T ss_dssp CCEECTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56999999999999999999886666643
No 78
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=39.31 E-value=37 Score=27.23 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
-|++++++|..+|...+++.|+ .+|+..|+++.-
T Consensus 239 dL~~lv~~Aa~~A~~~~~~~It-~~dl~~al~~v~ 272 (499)
T 2dhr_A 239 DLENLLNEAALLAAREGRRKIT-MKDLEEAADRVM 272 (499)
T ss_dssp HHHHHHHHHHHHHTTTCCSSCC-SHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCccC-HHHHHHHHHHHh
Confidence 4678888998888888888999 999999999864
No 79
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.30 E-value=28 Score=27.59 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 48 VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 48 ~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
.-++.++++|.-+|-..+|..|+ .+|...|+++.
T Consensus 356 ADi~~l~~eA~~~Air~~~~~vt-~~Df~~Al~~v 389 (405)
T 4b4t_J 356 ADVKGVCTEAGMYALRERRIHVT-QEDFELAVGKV 389 (405)
T ss_dssp HHHHHHHHHHHHHHHHTTCSBCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcC-HHHHHHHHHHH
Confidence 35778899998888888999999 99999999863
No 80
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=39.21 E-value=22 Score=29.38 Aligned_cols=30 Identities=27% Similarity=0.159 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
++.+++-|-++|.-.+|..|+ .+||..|++
T Consensus 452 leaLiRlA~A~A~L~gR~~V~-~eDV~~Ai~ 481 (506)
T 3f8t_A 452 LESVERLAKAHARMRLSDDVE-PEDVDIAAE 481 (506)
T ss_dssp HHHHHHHHHHHHHHTTCSEEC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCC-HHHHHHHHH
Confidence 456899999999999999999 999887653
No 81
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=37.71 E-value=32 Score=24.56 Aligned_cols=31 Identities=19% Similarity=-0.047 Sum_probs=26.5
Q ss_pred HHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 51 ENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 51 e~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..+++-|.++|.-.+|..|+ .+||..+++..
T Consensus 267 ~~ll~~a~a~A~l~g~~~v~-~~dv~~~~~~v 297 (331)
T 2r44_A 267 INLNRVAKAMAFFNNRDYVL-PEDIKEVAYDI 297 (331)
T ss_dssp HHHHHHHHHHHHHTTCSBCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHH
Confidence 45778888899999999999 99999988764
No 82
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=37.70 E-value=59 Score=24.02 Aligned_cols=53 Identities=9% Similarity=0.027 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 36 GLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 36 ~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
.++|+++-+.+=+=..+++++...-.+-++=||+.+.+|-.-++++...||.-
T Consensus 20 ~~~~~kise~~G~Ky~~~A~eiA~~l~~~kGKkIRs~~dAl~s~eK~k~nlnk 72 (204)
T 1col_A 20 AGMGDKIGEHLGDKYKAIAKDIADNIKNFQGKTIRSFDDAMASLNKITANPAM 72 (204)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCHHHHHHHHHHHhhChhh
Confidence 34565554444333333444444333446889999999999999998888863
No 83
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=37.51 E-value=14 Score=26.17 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=43.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
.|.+.-|+.|-+++..|.+.+++..-....|.+=+. + .+++.-.|+.. ||.+
T Consensus 71 ~ig~~~fedLDElI~~yv~pm~~~~~~~~~h~kf~~-s-~~~~e~~L~~~--~p~~ 122 (178)
T 2xp1_A 71 TCSNKHFEDIDEVISVYVRPILRNLKSIKAHAKYFN-S-PEDAEKLLSSF--DGSK 122 (178)
T ss_dssp EETTEEESSHHHHHHHTHHHHHHHHHHHHHSTTBCS-C-TTTSHHHHHTC--CSSS
T ss_pred EECCcEECCHHHHHHHHHHHHHHHHHHHHhCCccCC-C-HHHHHHHHHHh--CCCC
Confidence 566667999999999999999998888888887666 6 88888888766 6654
No 84
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=35.18 E-value=36 Score=27.03 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
-+++++++|.-+|-..+|..|+ .+|+..|+++.
T Consensus 390 Di~~l~~eA~~~air~~~~~i~-~~d~~~Al~~v 422 (437)
T 4b4t_L 390 DIRNCATEAGFFAIRDDRDHIN-PDDLMKAVRKV 422 (437)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHH
Confidence 4677889998888888999999 99999999874
No 85
>3fes_A ATP-dependent CLP endopeptidase; alpha-helical bundles, structural genomics, PSI-2, protein S initiative; HET: PG4 EPE; 1.82A {Clostridium difficile}
Probab=34.72 E-value=42 Score=21.70 Aligned_cols=34 Identities=6% Similarity=-0.074 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
-+..++..|...|...+-..|+ .+.+.+||=..+
T Consensus 85 ~~~~vl~~A~~~A~~~~~~~v~-~eHlLlAll~~~ 118 (145)
T 3fes_A 85 RSKQILELSGMFANKLKTNYIG-TEHILLAIIQEG 118 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCccc-HHHHHHHHHhCC
Confidence 3567899999999999999999 999888875544
No 86
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=34.41 E-value=74 Score=20.07 Aligned_cols=41 Identities=7% Similarity=-0.201 Sum_probs=22.8
Q ss_pred chhhHHHHHHHHHHHH---HHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 34 FAGLIYEETRGVLKVV---LENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 34 IS~~iy~elr~vLe~f---le~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
+++++.+.+.....-- +.++++.+..++ ++|+ .+||..++.
T Consensus 181 ~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~~-----~~I~-~~~v~~~~~ 224 (226)
T 2chg_A 181 ITEDGLEALIYISGGDFRKAINALQGAAAIG-----EVVD-ADTIYQITA 224 (226)
T ss_dssp BCHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----SCBC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-----ceec-HHHHHHHhc
Confidence 5665555554433222 223444444433 6899 999988874
No 87
>1a87_A Colicin N; bacteriocin, toxin, pore-forming activity; 3.10A {Escherichia coli K12} SCOP: f.1.1.1
Probab=34.39 E-value=59 Score=25.64 Aligned_cols=52 Identities=10% Similarity=0.042 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCCc
Q psy17761 36 GLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHPC 87 (92)
Q Consensus 36 ~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~~ 87 (92)
.++|+++-+.+=+-..+++++...-.+-++=|||.+.+|-.-++++...||.
T Consensus 138 a~fy~kIsE~~GeKYk~lAkeIA~~lknfKGKkIRs~dDALksfEKyk~nln 189 (321)
T 1a87_A 138 SGMGDKLGEYLGVKYKNVAKEVANDIKNFHGRNIRSYNEAMASLNKVLANPK 189 (321)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHTCCGGGCCCHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHhhChh
Confidence 4455555544444444455555444445688999999999999998888875
No 88
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=33.93 E-value=1.2e+02 Score=21.36 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=38.2
Q ss_pred cchhhHHHHHHHHH---------H---HHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 33 VFAGLIYEETRGVL---------K---VVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 33 RIS~~iy~elr~vL---------e---~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
.+++++.+.+.... . -++.++++.+...++..+..+|+ .+||..++.....+
T Consensus 214 ~~~~~~~~~l~~~~~~~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~-~~~v~~~~~~~~~~ 277 (389)
T 1fnn_A 214 SYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIA-PEDVRKSSKEVLFG 277 (389)
T ss_dssp SSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCC-HHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcC-HHHHHHHHHHHhhh
Confidence 46777766666655 1 33567788888888888889999 99999888776443
No 89
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=33.71 E-value=98 Score=22.02 Aligned_cols=48 Identities=6% Similarity=-0.078 Sum_probs=34.4
Q ss_pred ccchhhHHHHHHHHHH---H---HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 32 SVFAGLIYEETRGVLK---V---VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 32 kRIS~~iy~elr~vLe---~---fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
..+++++.+.+..... - .+.++++.+..+++ +..+|+ .+||..+++..
T Consensus 217 ~~~~~~~~~~i~~~~~~~~G~~r~a~~~l~~a~~~a~--~~~~i~-~~~v~~~~~~~ 270 (384)
T 2qby_B 217 GTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLAS--GGGIIR-KEHVDKAIVDY 270 (384)
T ss_dssp TSCCSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT--SSSCCC-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhc--CCCccC-HHHHHHHHHHH
Confidence 3567777666666554 1 35567788888887 678899 99999988765
No 90
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=33.45 E-value=55 Score=26.21 Aligned_cols=46 Identities=13% Similarity=0.010 Sum_probs=33.5
Q ss_pred cchhhHHHHHHHHHHH-------------HHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 33 VFAGLIYEETRGVLKV-------------VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 33 RIS~~iy~elr~vLe~-------------fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
.+++++.+-+...... .++.+++-|-++|...+|..|+ .+||. +++
T Consensus 225 ~v~d~v~e~i~~l~~~lr~~r~~~~iS~R~~~~llr~A~A~A~l~gr~~Vt-~eDv~-~a~ 283 (500)
T 3nbx_X 225 TLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVA-PVDLI-LLK 283 (500)
T ss_dssp BCCHHHHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHHHHHHHHHTTCSBCC-GGGGG-GGG
T ss_pred cCchHHHHHHHHHHHHhhcCCCCCccchhHHHHHHHHHHHHHhhcCCcccc-chHHH-HHH
Confidence 4566666555554432 3456888899999999999999 99998 443
No 91
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.34 E-value=34 Score=27.11 Aligned_cols=35 Identities=11% Similarity=-0.024 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRP 84 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~ 84 (92)
-++.++++|.-.|-..+++.|+ .+|...|+++..+
T Consensus 390 Di~~l~~eA~~~a~r~~~~~i~-~~Df~~Al~~v~~ 424 (434)
T 4b4t_M 390 QLKAVTVEAGMIALRNGQSSVK-HEDFVEGISEVQA 424 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCSSBC-HHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHcCCCCcC-HHHHHHHHHHHhC
Confidence 4778899998888888999999 9999999988643
No 92
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=31.88 E-value=32 Score=22.61 Aligned_cols=25 Identities=4% Similarity=-0.029 Sum_probs=17.0
Q ss_pred hhcCCcccccchhHHHHHHhhCCCCc
Q psy17761 62 RHAKRQTGHQRMDSRLRAKTSRPHPC 87 (92)
Q Consensus 62 eHA~RKTVt~~~DV~~alkr~g~~~~ 87 (92)
...+--+|+ .+++..+|+..|.+|-
T Consensus 21 D~d~dG~I~-~~El~~~l~~lg~~~~ 45 (176)
T 2lhi_A 21 DKDNNGSIS-SSELATVMRSLGLSPS 45 (176)
T ss_dssp CSSCSSCBC-HHHHHHHHHHHTCCCC
T ss_pred CCCCCCCCC-HHHHHHHHHHcCCChh
Confidence 444555777 7777777777777763
No 93
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=31.30 E-value=46 Score=26.31 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
-++.++++|.-.|-..+|+.|+ .+|+..|++++
T Consensus 382 di~~l~~eA~~~a~r~~~~~i~-~~d~~~A~~~~ 414 (428)
T 4b4t_K 382 VIAAIMQEAGLRAVRKNRYVIL-QSDLEEAYATQ 414 (428)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHh
Confidence 4777889998888888999999 99999999875
No 94
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=30.89 E-value=5.8 Score=26.39 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=23.4
Q ss_pred CCchhHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17761 19 GPPSVVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDA 57 (92)
Q Consensus 19 ~~~aIRrlar~GakRIS~~iy~elr~vLe~fle~Iirda 57 (92)
|+++..+|.++|++-+... ...+.++|+.|++.-+.+.
T Consensus 86 G~~a~~~L~~~GI~v~~~~-~g~i~eal~~~~~G~L~~~ 123 (136)
T 1o13_A 86 GRRAIAAFEAMGVKVIKGA-SGTVEEVVNQYLSGQLKDS 123 (136)
T ss_dssp CHHHHHHHHHTTCEEECSC-CSBHHHHHHHHHTTC----
T ss_pred CHHHHHHHHHCCCEEEecC-CCCHHHHHHHHHhCCCCCC
Confidence 4688899999997655532 2456777777776544443
No 95
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=30.39 E-value=70 Score=23.25 Aligned_cols=35 Identities=3% Similarity=-0.211 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCC
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPH 85 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~ 85 (92)
+..+++.+..+|.-.++..|+ .+++..+++....+
T Consensus 219 a~~ll~~~~~~a~~~~~~~It-~~~v~~al~~~~~~ 253 (334)
T 1in4_A 219 AIRLTKRVRDMLTVVKADRIN-TDIVLKTMEVLNID 253 (334)
T ss_dssp HHHHHHHHHHHHHHHTCSSBC-HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCCCcC-HHHHHHHHHHhCCC
Confidence 344666666777777788899 99999999887643
No 96
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=30.34 E-value=81 Score=19.70 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=28.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy17761 33 VFAGLIYEETRGVLKVVLENVIRDAVTYPRH 63 (92)
Q Consensus 33 RIS~~iy~elr~vLe~fle~IirdavtyaeH 63 (92)
++|.+=.+++|++|..=|-++=+....|..|
T Consensus 3 ~ls~~~~e~ir~IL~~NLykiRqr~~SYnRH 33 (70)
T 2ygg_A 3 ALSKDKEEEIRKILRNNLQKTRQRLRSYNRH 33 (70)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 5888889999999999999999999999777
No 97
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=30.07 E-value=10 Score=23.88 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=20.0
Q ss_pred CCchhHHhhhcccccchhhHHHHHHHHHHHHHH
Q psy17761 19 GPPSVVWRVEVESSVFAGLIYEETRGVLKVVLE 51 (92)
Q Consensus 19 ~~~aIRrlar~GakRIS~~iy~elr~vLe~fle 51 (92)
|+++...|.++|++=+.. ....+.++|+.|++
T Consensus 72 G~~a~~~L~~~GI~v~~~-~~~~i~eal~~~~~ 103 (116)
T 1rdu_A 72 GRNAFETLKAAGVKVYRF-EGGTVQEAIDAFSE 103 (116)
T ss_dssp CSSCHHHHHTTTCEEECC-CSCBHHHHHHHHHT
T ss_pred CHhHHHHHHHCCCEEEEC-CCCCHHHHHHHHHh
Confidence 568888888888665543 12345566666654
No 98
>3kp1_E D-ornithine aminomutase S component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_E* 3koy_E* 3koz_E* 3kp0_E* 3kox_E*
Probab=29.81 E-value=85 Score=21.48 Aligned_cols=50 Identities=14% Similarity=0.027 Sum_probs=37.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCC
Q psy17761 32 SVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHP 86 (92)
Q Consensus 32 kRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~ 86 (92)
+.+....-+|+.+-..+..++|+.+.+.+++.- .|++ .| ...|.++|.+.
T Consensus 12 ~hl~~l~d~el~~rar~LA~kIv~pv~el~~~h--TTvS-VE--RtVlr~mGidg 61 (121)
T 3kp1_E 12 AHLANLSDEELQTRFWEMAEKIVDPLLDLGKKN--TTPS-IE--RSVLLRMGFSS 61 (121)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHE--ECHH-HH--HHHHHHTTCCH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC--CccH-HH--HHHHHHhCCCc
Confidence 445556678899999999999999999998764 6777 44 34566677664
No 99
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=29.13 E-value=59 Score=20.92 Aligned_cols=34 Identities=6% Similarity=-0.203 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
-+..++..|..+|...+-.-|+ .+.+.+||=..+
T Consensus 85 ~~~~vL~~A~~~a~~~~~~~i~-~eHlLlall~~~ 118 (146)
T 3fh2_A 85 RAKKVLELSLREGLQMGHKYIG-TEFLLLGLIREG 118 (146)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCcCc-HHHHHHHHHhCC
Confidence 3566899999999999999999 888888875443
No 100
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=28.79 E-value=53 Score=26.17 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
-+++++++|..+|...+++.|+ .+|+..|+.+.-
T Consensus 224 dL~~lv~~Aal~A~~~~~~~I~-~~dl~~al~~v~ 257 (476)
T 2ce7_A 224 DLENLVNEAALLAAREGRDKIT-MKDFEEAIDRVI 257 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCeec-HHHHHHHHHHHh
Confidence 4678889998888888889999 999999998863
No 101
>1rh1_A Colicin B; FEPA, cytotoxic bacterial protein, TONB, antibiotic; 2.50A {Escherichia coli} SCOP: b.110.1.1 f.1.1.1
Probab=27.48 E-value=1.2e+02 Score=25.23 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=22.5
Q ss_pred hcCCcccccchhHHHHHHhhCCCCcc
Q psy17761 63 HAKRQTGHQRMDSRLRAKTSRPHPCT 88 (92)
Q Consensus 63 HA~RKTVt~~~DV~~alkr~g~~~~~ 88 (92)
-++=||+.+.+|-.-++++...||..
T Consensus 357 n~KGKkIRnvdDAL~sfeKyk~nlnk 382 (511)
T 1rh1_A 357 NFQGKTIRSYDDAMSSINKLMANPSL 382 (511)
T ss_dssp HCTTCCCCCHHHHHHHHHHHTTCTTC
T ss_pred hccCceecCHHHHHHHHHHHHhchhh
Confidence 47889999999999999999888863
No 102
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=26.36 E-value=17 Score=23.80 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=26.8
Q ss_pred CccCCCCCCchhHHhhhcc--cccchhhHHHHHHHHHHHHHHHHHH
Q psy17761 12 GLRTPVSGPPSVVWRVEVE--SSVFAGLIYEETRGVLKVVLENVIR 55 (92)
Q Consensus 12 g~~~~v~~~~aIRrlar~G--akRIS~~iy~elr~vLe~fle~Iir 55 (92)
..++.|.++|.+-.+. .| +.|+.+-.-+ +.+..+|++++.
T Consensus 69 a~~~~V~g~PT~i~f~-~G~ev~Ri~G~~~~---~~f~~~L~~~l~ 110 (116)
T 3dml_A 69 ELARPVTFTPTFVLMA-GDVESGRLEGYPGE---DFFWPMLARLIG 110 (116)
T ss_dssp BCSSCCCSSSEEEEEE-TTEEEEEEECCCCH---HHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEE-CCEEEeeecCCCCH---HHHHHHHHHHHh
Confidence 4677889999999888 77 8899876433 233444444443
No 103
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=25.77 E-value=10 Score=24.08 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=18.5
Q ss_pred CCchhHHhhhcccccchhhHHHHHHHHHHHHHHH
Q psy17761 19 GPPSVVWRVEVESSVFAGLIYEETRGVLKVVLEN 52 (92)
Q Consensus 19 ~~~aIRrlar~GakRIS~~iy~elr~vLe~fle~ 52 (92)
|+++...|.++|++=+... ...+.++|+.|++.
T Consensus 73 G~~a~~~L~~~GI~v~~~~-~~~v~eal~~~~~g 105 (121)
T 2yx6_A 73 GRRAIEYFNSLGISVVTGV-YGRISDVIKAFIGG 105 (121)
T ss_dssp CHHHHHHHHHTTCEEECSB-CSBHHHHHHHHHTT
T ss_pred CHhHHHHHHHCCCEEEECC-CCCHHHHHHHHHcC
Confidence 4567777777775544431 23455556666543
No 104
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=25.68 E-value=11 Score=22.61 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=23.7
Q ss_pred cCCCCCCchhHHhhhcc--cccchhhHHHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGLIYEETRGVLKVV 49 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~iy~elr~vLe~f 49 (92)
++.|.+-|.+..+. .| +.|+.+.-.+++.+.++.+
T Consensus 72 ~~~v~~~Pt~~~~~-~G~~~~~~~G~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 72 KNEVSAMPTLLLFK-NGKEVAKVVGANPAAIKQAIAAN 108 (109)
T ss_dssp HTTCCSSSEEEEEE-TTEEEEEEESSCHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEE-CCEEEEEEeCCCHHHHHHHHHhh
Confidence 45577888988886 56 7788776556665555543
No 105
>1k6k_A ATP-dependent CLP protease ATP-binding subunit CLPA; chaperone, ATPase, adaptor binding, X-RAY, structure, N-domain, hydrolase; 1.80A {Escherichia coli} SCOP: a.174.1.1 PDB: 1r6c_X 1r6o_A* 1r6q_A* 1mg9_B* 1lzw_B* 1mbx_A* 1mbv_A 1mbu_A*
Probab=25.42 E-value=75 Score=19.95 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=25.0
Q ss_pred HHHHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 50 LENVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 50 le~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
+.+++..|..++...+-.-|. .+.+.+||=+
T Consensus 84 ~~~~l~~A~~~A~~~~~~~i~-~ehLLlall~ 114 (143)
T 1k6k_A 84 FQRVLQRAVFHVQSSGRNEVT-GANVLVAIFS 114 (143)
T ss_dssp HHHHHHHHHHHHHSSSCSCBC-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCccC-HHHHHHHHHh
Confidence 455788888888888889999 8888888744
No 106
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=24.71 E-value=1.3e+02 Score=22.04 Aligned_cols=57 Identities=11% Similarity=0.002 Sum_probs=44.2
Q ss_pred hHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhC
Q psy17761 23 VVWRVEVESSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSR 83 (92)
Q Consensus 23 IRrlar~GakRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g 83 (92)
.......-+++|-..+|+..+.+|+..-+.+-+-|-.+-++ +|++ .+|+.-.++...
T Consensus 147 ta~~iD~Ev~~il~~ay~~a~~iL~~nr~~L~~lA~~Lle~---EtL~-~~ei~~il~~~~ 203 (238)
T 2di4_A 147 LLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEK---ETIT-CEEFVEVFKLYG 203 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEEC-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CeeC-HHHHHHHHccCC
Confidence 34444455778888899999999998887777777777766 8999 999998887654
No 107
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=24.30 E-value=1.6e+02 Score=21.73 Aligned_cols=23 Identities=4% Similarity=-0.123 Sum_probs=18.4
Q ss_pred cccccchhHHHHHHhhCC-CCcccc
Q psy17761 67 QTGHQRMDSRLRAKTSRP-HPCTVL 90 (92)
Q Consensus 67 KTVt~~~DV~~alkr~g~-~~~~~~ 90 (92)
..|+ .+||..|+|.+.. +++.++
T Consensus 127 ~~IS-~dDi~rAik~L~~L~gf~v~ 150 (233)
T 1u5t_A 127 LNVG-LDDLEKSIDMLKSLECFEIF 150 (233)
T ss_dssp TTCC-HHHHHHHHHHHTTTCCCCEE
T ss_pred cCCC-HHHHHHHHHHhhhccCeEEE
Confidence 6899 9999999999875 555544
No 108
>1khy_A CLPB protein; alpha helix, chaperone; 1.95A {Escherichia coli} SCOP: a.174.1.1
Probab=24.23 E-value=75 Score=20.02 Aligned_cols=31 Identities=13% Similarity=-0.141 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHH
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAK 80 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alk 80 (92)
-+.+++..|..++...+-..|+ .+.+.+|+=
T Consensus 86 ~~~~vl~~A~~~a~~~~~~~i~-~ehlLlall 116 (148)
T 1khy_A 86 DLVRVLNLCDKLAQKRGDNFIS-SELFVLAAL 116 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCSSBC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCeec-HHHHHHHHH
Confidence 4566888899999888889999 888888774
No 109
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=23.24 E-value=92 Score=18.89 Aligned_cols=43 Identities=14% Similarity=0.003 Sum_probs=31.9
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccccchhHHHHHHhhCCCC
Q psy17761 31 SSVFAGLIYEETRGVLKVVLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHP 86 (92)
Q Consensus 31 akRIS~~iy~elr~vLe~fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~g~~~ 86 (92)
...+|.+-.+|++++.+. -...+--+|+ .+++..+|+..|.++
T Consensus 27 ~~~l~~~~~~el~~~F~~------------~D~d~~G~I~-~~El~~~l~~lg~~~ 69 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKV------------FDRDGNGFIS-KQELGTAMRSLGYMP 69 (100)
T ss_dssp CCCCCGGGHHHHHHHHHH------------TCSSCSSCBC-HHHHHHHHHHHTCCC
T ss_pred cccCCHHHHHHHHHHHHH------------HcCCCCCcCC-HHHHHHHHHHhCCCC
Confidence 456777777777655444 4666778888 999999999988765
No 110
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=22.94 E-value=13 Score=21.42 Aligned_cols=36 Identities=11% Similarity=0.064 Sum_probs=23.6
Q ss_pred cCCCCCCchhHHhhhcc--cccchhh-HHHHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGL-IYEETRGVLKVVL 50 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~-iy~elr~vLe~fl 50 (92)
++.|.+-|.+..+ +.| +.|..+. -.+++.+.++.++
T Consensus 70 ~~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 70 KYSVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred hcCcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 4567788998888 566 6676665 4566666555543
No 111
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=22.85 E-value=19 Score=20.99 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=20.6
Q ss_pred cCCCCCCchhHHhhhcc--cccchhhHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGLIYEETRGVLK 47 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~iy~elr~vLe 47 (92)
++.|.+-|.+..+ +.| +.|+.+.-.+++.+.++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~l~~~l~ 103 (107)
T 1gh2_A 69 TNNISATPTFQFF-RNKVRIDQYQGADAVGLEEKIK 103 (107)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESSCHHHHHHHHH
T ss_pred hcCCCcccEEEEE-ECCeEEEEEeCCCHHHHHHHHH
Confidence 4567788888777 456 67777754444443333
No 112
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=22.37 E-value=16 Score=21.18 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=24.1
Q ss_pred ccCCCCCCchhHHhhhcc--cccchhh-HHHHHHHHHHHHHH
Q psy17761 13 LRTPVSGPPSVVWRVEVE--SSVFAGL-IYEETRGVLKVVLE 51 (92)
Q Consensus 13 ~~~~v~~~~aIRrlar~G--akRIS~~-iy~elr~vLe~fle 51 (92)
-++.|.+-|.+..+ +.| +.|..+. -.+++.+.|+.+++
T Consensus 70 ~~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 70 QRFSLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp HHTTCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HhcCCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 34567788888888 455 6677765 45666655555543
No 113
>3zri_A CLPB protein, CLPV; chaperone, HSP100 proteins, AAA+ proteins, T6SS, secretion,; 1.80A {Vibrio cholerae} PDB: 3zrj_A
Probab=22.33 E-value=90 Score=21.30 Aligned_cols=31 Identities=16% Similarity=0.061 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhhh-hcCCcccccchhHHHHHHh
Q psy17761 50 LENVIRDAVTYPR-HAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 50 le~Iirdavtyae-HA~RKTVt~~~DV~~alkr 81 (92)
+.+++.+|..+|. ..|-..|. .+.+.+||=+
T Consensus 103 l~~vL~~A~~~A~l~~gd~~I~-teHLLLALl~ 134 (171)
T 3zri_A 103 LVELLQEAWLLSSTELEQAELR-SGAIFLAALT 134 (171)
T ss_dssp HHHHHHHHHHHHHTTTCCSSBC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEc-HHHHHHHHHh
Confidence 4568999999999 89999999 9999999843
No 114
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=21.93 E-value=12 Score=21.45 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=22.6
Q ss_pred cCCCCCCchhHHhhhcc--cccchhhHHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE--SSVFAGLIYEETRGVLKV 48 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G--akRIS~~iy~elr~vLe~ 48 (92)
++.|.+-|.+..+ +.| +.|+++.-.+++.+.++.
T Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~l~~~l~~ 103 (105)
T 3m9j_A 68 ESEVKSMPTFQFF-KKGQKVGEFSGANKEKLEATINE 103 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEEEESSCHHHHHHHHHH
T ss_pred HcCCCcCcEEEEE-ECCeEEEEEeCCCHHHHHHHHHH
Confidence 4557778898888 445 677877755556555544
No 115
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=21.46 E-value=75 Score=24.30 Aligned_cols=29 Identities=3% Similarity=0.003 Sum_probs=21.7
Q ss_pred HHHHHHHhhhhhcCCcccccchhHHHHHHh
Q psy17761 52 NVIRDAVTYPRHAKRQTGHQRMDSRLRAKT 81 (92)
Q Consensus 52 ~IirdavtyaeHA~RKTVt~~~DV~~alkr 81 (92)
++++.|..+|.-.++.+|+ .+||..++.-
T Consensus 408 ~ll~~a~~~A~~~~~~~v~-~~~v~~~~~~ 436 (456)
T 2c9o_A 408 QLLTPANLLAKINGKDSIE-KEHVEEISEL 436 (456)
T ss_dssp HTHHHHHHHHHHTTCSSBC-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCccC-HHHHHHHHHH
Confidence 3455555566666999999 9999988864
No 116
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=21.42 E-value=1.8e+02 Score=18.96 Aligned_cols=32 Identities=9% Similarity=-0.121 Sum_probs=21.6
Q ss_pred HHHHHhhhhhcCCcccccchhHHHHHHhhCCCC
Q psy17761 54 IRDAVTYPRHAKRQTGHQRMDSRLRAKTSRPHP 86 (92)
Q Consensus 54 irdavtyaeHA~RKTVt~~~DV~~alkr~g~~~ 86 (92)
++++.....-.+--+|+ .+++..+|+..|.++
T Consensus 59 l~~~F~~~D~d~~G~Is-~~El~~~l~~~g~~~ 90 (197)
T 3pm8_A 59 LRNIFIALDVDNSGTLS-SQEILDGLKKIGYQK 90 (197)
T ss_dssp HHHHHHHHCTTCSSEEC-HHHHHHHHHHHC---
T ss_pred HHHHHHHHCCCCCCcCC-HHHHHHHHHHhCCCC
Confidence 44455555556677899 999999999888654
No 117
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=21.23 E-value=22 Score=21.16 Aligned_cols=38 Identities=13% Similarity=-0.014 Sum_probs=24.2
Q ss_pred cCCCCCCchhHHhhhcc-cccchhh-----HHHHHHHHHHHHHH
Q psy17761 14 RTPVSGPPSVVWRVEVE-SSVFAGL-----IYEETRGVLKVVLE 51 (92)
Q Consensus 14 ~~~v~~~~aIRrlar~G-akRIS~~-----iy~elr~vLe~fle 51 (92)
++.|.+-|.+..+...| +.|+.+. -.+++.+.++..++
T Consensus 70 ~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 70 KAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp HTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred HcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 45677888888886666 6677663 45566555555443
No 118
>2y1q_A CLPC N-domain, negative regulator of genetic competence CLPC/MEC; transcription, proteolysis; 1.50A {Bacillus subtilis} PDB: 2y1r_A* 2k77_A
Probab=21.22 E-value=1e+02 Score=19.44 Aligned_cols=33 Identities=12% Similarity=-0.058 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhhhhcCCcccccchhHHHHHHhh
Q psy17761 49 VLENVIRDAVTYPRHAKRQTGHQRMDSRLRAKTS 82 (92)
Q Consensus 49 fle~IirdavtyaeHA~RKTVt~~~DV~~alkr~ 82 (92)
-+.+++..|...|...+-..|+ .+.+.++|=+.
T Consensus 83 ~~~~vL~~A~~~A~~~~~~~i~-~ehlLlall~~ 115 (150)
T 2y1q_A 83 RAKKVIELSMDEARKLGHSYVG-TEHILLGLIRE 115 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCeec-HHHHHHHHHhC
Confidence 3556888899999988999999 88888877543
No 119
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=20.65 E-value=13 Score=23.64 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=14.6
Q ss_pred CchhHHhhhcccccchhhHHHHHHHHHHHHHH
Q psy17761 20 PPSVVWRVEVESSVFAGLIYEETRGVLKVVLE 51 (92)
Q Consensus 20 ~~aIRrlar~GakRIS~~iy~elr~vLe~fle 51 (92)
+++...|.++|++=+.. ....+.++|+.|++
T Consensus 76 ~~a~~~L~~~GI~v~~~-~~~~i~eal~~~~~ 106 (124)
T 1eo1_A 76 PNAFEVLNELGIKIYRA-TGTSVEENLKLFTE 106 (124)
T ss_dssp HHHHHHHHHHTCEEEEC-CSCCHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEc-CCCCHHHHHHHHHh
Confidence 45666666666443332 11234444454443
No 120
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=20.25 E-value=2.7e+02 Score=20.55 Aligned_cols=54 Identities=13% Similarity=-0.031 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHHHHHHH---------HHHHhhhhhc---CCcccccchhHHHHHHhhCC--CCcccc
Q psy17761 36 GLIYEETRGVLKVVLENVI---------RDAVTYPRHA---KRQTGHQRMDSRLRAKTSRP--HPCTVL 90 (92)
Q Consensus 36 ~~iy~elr~vLe~fle~Ii---------rdavtyaeHA---~RKTVt~~~DV~~alkr~g~--~~~~~~ 90 (92)
+|.|-|+..-+-++...-. .|....-..+ .+..|+ .+||..|+|.+.. +++.|+
T Consensus 70 gdfy~eLavqIvEvC~~tr~~nGGli~L~el~~~~~r~Rg~~~~~IS-~dDi~rAik~L~~LG~g~~v~ 137 (234)
T 3cuq_A 70 GDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVS-QDDLIRAIKKLKALGTGFGII 137 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHTTTTCCSSCC-HHHHHHHHHHHGGGBTTCEEE
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHHhcCCccCccC-HHHHHHHHHHHHhcCCCeEEE
Confidence 5777777655555554422 2332222222 226899 9999999987532 455553
Done!