Query psy17765
Match_columns 475
No_of_seqs 364 out of 1023
Neff 4.9
Searched_HMMs 13730
Date Fri Aug 16 22:17:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17765.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17765hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q9ca_ a.22.1.3 (A:) Histone 100.0 1.2E-47 8.7E-52 354.6 14.0 162 29-218 11-172 (172)
2 d1tzya_ a.22.1.1 (A:) Histone 100.0 1.7E-42 1.2E-46 297.3 8.9 105 134-238 2-106 (106)
3 d1u35c1 a.22.1.1 (C:814-919) m 100.0 3.2E-42 2.3E-46 295.7 8.6 105 135-239 2-106 (106)
4 d1f66c_ a.22.1.1 (C:) Histone 100.0 8.3E-40 6.1E-44 279.7 8.9 101 135-236 2-103 (103)
5 d1tzyb_ a.22.1.1 (B:) Histone 100.0 1.5E-36 1.1E-40 254.1 8.6 92 32-123 1-92 (92)
6 d1tzyb_ a.22.1.1 (B:) Histone 100.0 8.3E-33 6E-37 231.4 0.9 68 386-453 1-69 (92)
7 d1f1ea_ a.22.1.2 (A:) Archaeal 99.9 4.5E-23 3.3E-27 186.1 13.1 139 38-209 5-143 (151)
8 d1jfia_ a.22.1.3 (A:) Negative 99.2 8.6E-12 6.3E-16 96.9 6.3 65 144-208 2-66 (66)
9 d1f1ea_ a.22.1.2 (A:) Archaeal 99.1 1E-11 7.4E-16 111.1 2.1 59 394-452 7-66 (151)
10 d1n1jb_ a.22.1.3 (B:) Nuclear 98.9 1.8E-09 1.3E-13 85.8 8.2 73 145-217 1-73 (78)
11 d1q9ca_ a.22.1.3 (A:) Histone 98.7 2.1E-09 1.5E-13 97.9 3.2 56 387-452 15-71 (172)
12 d1htaa_ a.22.1.2 (A:) Archaeal 98.1 3.7E-06 2.7E-10 64.5 7.1 64 144-208 3-66 (68)
13 d1ku5a_ a.22.1.2 (A:) Archaeal 98.0 4.2E-06 3.1E-10 64.0 6.8 65 144-209 2-66 (66)
14 d1n1ja_ a.22.1.3 (A:) Nuclear 97.8 1.4E-05 1E-09 64.1 6.7 71 143-213 1-72 (87)
15 d1htaa_ a.22.1.2 (A:) Archaeal 97.6 9.6E-05 7E-09 56.3 7.9 62 38-100 7-68 (68)
16 d1dbha1 a.87.1.1 (A:198-404) S 97.4 5.2E-06 3.8E-10 74.1 -1.5 71 286-356 28-103 (207)
17 d1jfib_ a.22.1.3 (B:) Negative 97.3 0.00021 1.5E-08 61.7 6.8 69 142-210 2-70 (135)
18 d1ku5a_ a.22.1.2 (A:) Archaeal 97.3 0.00025 1.8E-08 53.7 6.5 60 38-98 6-65 (66)
19 d1n1ja_ a.22.1.3 (A:) Nuclear 96.8 0.0015 1.1E-07 52.0 7.5 63 38-100 6-69 (87)
20 d1jfia_ a.22.1.3 (A:) Negative 96.6 0.0013 9.4E-08 49.8 5.6 60 38-97 6-65 (66)
21 d1jfib_ a.22.1.3 (B:) Negative 96.6 0.0023 1.7E-07 54.9 7.4 63 38-100 8-70 (135)
22 d2bykb1 a.22.1.3 (B:11-99) Chr 96.6 0.0015 1.1E-07 52.1 5.8 65 146-210 1-66 (89)
23 d2byka1 a.22.1.3 (A:29-100) Ch 96.5 0.0013 9.4E-08 50.9 5.0 64 155-218 2-66 (72)
24 d2bykb1 a.22.1.3 (B:11-99) Chr 96.5 0.0026 1.9E-07 50.7 7.0 65 39-103 4-70 (89)
25 d1n1jb_ a.22.1.3 (B:) Nuclear 96.0 0.0072 5.2E-07 46.7 6.8 62 38-100 4-66 (78)
26 d2huec1 a.22.1.1 (C:20-101) Hi 96.0 0.0044 3.2E-07 49.0 5.4 63 36-99 11-73 (82)
27 d1tzyc_ a.22.1.1 (C:) Histone 95.6 0.013 9.4E-07 47.6 6.8 68 32-99 23-90 (95)
28 d2huec1 a.22.1.1 (C:20-101) Hi 95.6 0.018 1.3E-06 45.3 7.5 66 145-211 10-75 (82)
29 d1h3ob_ a.22.1.3 (B:) TAF(II)- 95.0 0.035 2.5E-06 43.1 7.3 61 39-99 8-68 (74)
30 d1tzya_ a.22.1.1 (A:) Histone 93.4 0.077 5.6E-06 43.7 6.6 70 37-108 15-84 (106)
31 d1u35c1 a.22.1.1 (C:814-919) m 93.3 0.06 4.4E-06 44.4 5.8 69 37-107 14-82 (106)
32 d1f66c_ a.22.1.1 (C:) Histone 90.8 0.24 1.8E-05 40.3 6.6 69 38-108 15-84 (103)
33 d1bh9b_ a.22.1.3 (B:) TAF(II)2 90.4 0.26 1.9E-05 39.3 6.2 63 145-208 17-80 (89)
34 d1ki1b1 a.87.1.1 (B:1229-1438) 90.4 0.024 1.7E-06 49.7 -0.1 135 286-422 34-192 (210)
35 d1tafb_ a.22.1.3 (B:) TAF(II)6 90.3 0.29 2.1E-05 37.4 6.1 48 52-99 23-70 (70)
36 d1tzyc_ a.22.1.1 (C:) Histone 89.0 0.51 3.7E-05 37.8 7.1 67 142-208 19-89 (95)
37 d2dfka1 a.87.1.1 (A:37-239) Rh 85.8 0.046 3.4E-06 47.7 -1.3 68 286-357 39-111 (203)
38 d2byka1 a.22.1.3 (A:29-100) Ch 83.7 1.3 9.5E-05 33.3 6.5 55 46-100 2-58 (72)
39 d1h3ob_ a.22.1.3 (B:) TAF(II)- 82.8 0.31 2.3E-05 37.5 2.5 55 394-448 9-63 (74)
40 d1fnna2 c.37.1.20 (A:1-276) CD 81.3 2.1 0.00015 36.7 7.9 66 36-101 197-274 (276)
41 d1f5xa_ a.87.1.1 (A:) RhoGEF V 78.7 0.095 6.9E-06 46.2 -2.1 63 286-357 52-119 (208)
42 d1k6ka_ a.174.1.1 (A:) N-termi 77.9 1.1 7.9E-05 36.3 4.5 39 180-218 7-45 (142)
43 d1tafb_ a.22.1.3 (B:) TAF(II)6 77.2 3.6 0.00026 31.0 7.0 65 143-208 5-69 (70)
44 d1w5sa2 c.37.1.20 (A:7-293) CD 70.8 5.6 0.00041 34.0 7.8 62 37-98 215-285 (287)
45 d1khya_ a.174.1.1 (A:) N-termi 67.7 2.2 0.00016 34.2 4.0 40 179-218 7-48 (139)
46 d1qvra1 a.174.1.1 (A:4-148) N- 63.0 2.9 0.00021 34.4 4.0 41 179-219 7-49 (145)
47 d1ntya1 a.87.1.1 (A:1231-1414) 59.5 1.1 8.3E-05 38.0 0.7 65 286-358 28-101 (184)
48 d1foea1 a.87.1.1 (A:1034-1239) 59.3 0.42 3E-05 41.1 -2.3 71 286-358 32-116 (206)
49 d1tafa_ a.22.1.3 (A:) TAF(II)4 57.8 13 0.00091 27.7 6.3 61 40-101 7-67 (68)
50 d1tafa_ a.22.1.3 (A:) TAF(II)4 55.6 21 0.0015 26.5 7.2 56 150-209 7-65 (68)
51 d1by1a_ a.87.1.1 (A:) beta-pix 50.0 0.8 5.8E-05 40.0 -2.0 67 286-357 38-109 (209)
52 d1xcga1 a.87.1.1 (A:714-941) R 48.9 1.2 9E-05 38.6 -0.9 69 286-357 46-122 (228)
53 d1k6ka_ a.174.1.1 (A:) N-termi 41.3 10 0.00074 30.1 3.8 40 180-219 85-126 (142)
54 d1bh9b_ a.22.1.3 (B:) TAF(II)2 40.5 48 0.0035 25.5 7.5 63 37-100 19-82 (89)
55 d1txda1 a.87.1.1 (A:766-999) R 38.7 2.2 0.00016 37.1 -1.0 70 286-357 47-125 (234)
56 d1khya_ a.174.1.1 (A:) N-termi 35.9 15 0.0011 28.9 3.9 40 180-219 85-125 (139)
57 d1w5sa2 c.37.1.20 (A:7-293) CD 35.1 12 0.00089 31.7 3.5 30 181-210 258-287 (287)
58 d1qvra1 a.174.1.1 (A:4-148) N- 33.5 15 0.0011 29.9 3.6 107 70-211 8-116 (145)
59 d2v7fa1 a.4.5.84 (A:2-150) Rib 28.4 17 0.0012 30.8 3.1 45 392-436 95-149 (149)
60 d1wwia1 a.22.1.4 (A:1-148) Hyp 25.1 53 0.0039 27.6 5.7 60 144-204 2-61 (148)
61 d1fnna2 c.37.1.20 (A:1-276) CD 24.3 29 0.0021 28.9 4.0 29 180-208 243-271 (276)
62 d1qdlb_ c.23.16.1 (B:) Anthran 20.6 19 0.0014 30.0 1.9 23 400-422 173-195 (195)
63 d1gpma2 c.23.16.1 (A:3-207) GM 20.0 18 0.0013 30.4 1.7 23 400-422 177-199 (205)
No 1
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-47 Score=354.59 Aligned_cols=162 Identities=24% Similarity=0.446 Sum_probs=147.5
Q ss_pred cccCchhHHHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHH
Q psy17765 29 KHRRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKH 108 (475)
Q Consensus 29 ~~k~~~sf~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKh 108 (475)
.++|++.|..||+|||+||||+++|+++|+++||+|++++|++|+. ..|.|++|||.+|+++||++|++|
T Consensus 11 ~~~w~g~f~~~i~KVl~qvhP~l~i~~~Al~~i~~~i~~ll~~L~~----------~~p~sv~dVe~~v~~~fp~~i~~~ 80 (172)
T d1q9ca_ 11 APKWRGLLVPALKKVQGQVHPTLESNDDALQYVEELILQLLNMLCQ----------AQPRSASDVEERVQKSFPHPIDKW 80 (172)
T ss_dssp HHHHTTSSHHHHHHHHHHHCSSSBCCHHHHHHHHHHHHHHHHHHHT----------TCCCSTTHHHHHHHHSSCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHc----------cCCccHHHHHHHHHHhCCchHHHH
Confidence 5689999999999999999999999999999999999999999762 456799999999999999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCCCCCccCcCCCCCcccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhH
Q psy17765 109 AVSEGTKAVTKYTSSKGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGN 188 (475)
Q Consensus 109 AvseG~kAV~ky~sSkg~~~k~~~~~~srSsRagL~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn 188 (475)
|++++.+++.+ +|+|+||+|||+||+|+||++ +++||+++|+|||+||||||++||||+|||
T Consensus 81 ai~~a~~~~~s-----------------rs~ragL~fPV~rv~rlLk~~-~a~RVs~~A~vyLaavLEyl~aeILelAgn 142 (172)
T d1q9ca_ 81 AIADAQSAIEK-----------------RKRRNPLSLPVEKIHPLLKEV-LGYKIDHQVSVYIVAVLEYISADILKLAGN 142 (172)
T ss_dssp HHHHHHHHHC-------------------------CCCHHHHHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-----------------cccccCceecHHHHHHHHHhc-cccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999864 688999999999999999986 899999999999999999999999999999
Q ss_pred HHHhcCCcccchhHHHHHHhccHHHHhhhc
Q psy17765 189 AARDNKKTRIIPRHLQLAIRNDEELNKLLS 218 (475)
Q Consensus 189 ~A~~~k~~rItP~hI~lAI~nD~EL~~Lf~ 218 (475)
+|+++++++|+|+||++||+||+||++||+
T Consensus 143 ~a~~~krkrItp~dI~lAi~nD~eL~~Lf~ 172 (172)
T d1q9ca_ 143 YVRNIRHYEITKQDIKVAMCADKVLMDMFH 172 (172)
T ss_dssp HHHHHTCSBCCHHHHHHHHHTCHHHHHHCC
T ss_pred HHHHcCCceecHHHHHHHHhCCHHHHHhhC
Confidence 999999999999999999999999999994
No 2
>d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=100.00 E-value=1.7e-42 Score=297.29 Aligned_cols=105 Identities=89% Similarity=1.267 Sum_probs=103.1
Q ss_pred ccCcCCCCCcccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccHHH
Q psy17765 134 SKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 213 (475)
Q Consensus 134 ~~srSsRagL~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL 213 (475)
.+|||+|||||||||||||+||+++|++||+++|||||+||||||++||||||||+|++++++||+|+||++||+||+||
T Consensus 2 ~~Srs~rAgL~FpV~rv~r~Lk~~~~~~rv~~~apVylaAVLEYLtaEiLELAgn~a~~~k~~rItPrhi~lAirnDeeL 81 (106)
T d1tzya_ 2 AKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 81 (106)
T ss_dssp CCCHHHHHTCSSCHHHHHHHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHTSHHH
T ss_pred CccccccCCccCChHHHHHHHHcCccccccCCCchHHHHHHHHHHHHHHHHHhhHHHHhcCCceecchhhhhcccCHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCceecCCcccCCcccccccc
Q psy17765 214 NKLLSGVTIAQGGVLPNIQAVRVLE 238 (475)
Q Consensus 214 ~~Lf~~~tIa~gGV~p~i~~~ll~~ 238 (475)
++||+++||++|||+|+||++||||
T Consensus 82 ~~L~~~vtI~~GGv~P~Ih~~Llpk 106 (106)
T d1tzya_ 82 NKLLGKVTIAQGGVLPNIQAVLLPK 106 (106)
T ss_dssp HHHTTTEEETTCCCCCCCCGGGSCC
T ss_pred HHHHcCCeecCCCccCccCHhhcCC
Confidence 9999999999999999999999986
No 3
>d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.2e-42 Score=295.73 Aligned_cols=105 Identities=62% Similarity=0.982 Sum_probs=103.2
Q ss_pred cCcCCCCCcccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccHHHH
Q psy17765 135 KTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELN 214 (475)
Q Consensus 135 ~srSsRagL~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL~ 214 (475)
.|||+|||||||||||||+|++++|++||+++||||||||||||++||||||||+|++++++||+|+||++||+||+||+
T Consensus 2 ~srs~ragL~FpV~ri~r~Lk~~~~~~rv~~~apVylaAVLEYL~aEILELAgn~a~~~k~~rItprhi~lairnD~EL~ 81 (106)
T d1u35c1 2 TSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVANDEELN 81 (106)
T ss_dssp CCHHHHHTCSSCHHHHHHHHHHHSTTSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHSHHHH
T ss_pred CCccccCCcccCHHHHHHHHhCCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHcCCCeeecchhhhcccCHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCceecCCcccCCccccccccc
Q psy17765 215 KLLSGVTIAQGGVLPNIQAVRVLEQ 239 (475)
Q Consensus 215 ~Lf~~~tIa~gGV~p~i~~~ll~~~ 239 (475)
+||+++||++|||+|+||++|||+|
T Consensus 82 ~L~~~vtI~~GGv~p~Ih~~Ll~kk 106 (106)
T d1u35c1 82 QLLKGVTIASGGVLPNIHPELLAKK 106 (106)
T ss_dssp HHTTTEEETTCCCCCCCCGGGSCCC
T ss_pred HHHcCCeEeCCcccCCcCHHhcCCC
Confidence 9999999999999999999999986
No 4
>d1f66c_ a.22.1.1 (C:) Histone H2A {Human (Homo sapiens), variant H2A.Z [TaxId: 9606]}
Probab=100.00 E-value=8.3e-40 Score=279.72 Aligned_cols=101 Identities=63% Similarity=0.949 Sum_probs=97.7
Q ss_pred cCcCCCCCcccchhHHHHHHhhcCccc-ccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccHHH
Q psy17765 135 KTRSSRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 213 (475)
Q Consensus 135 ~srSsRagL~FPVsRi~r~Lke~~~~~-RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL 213 (475)
.|||+|||||||||||||||++++|++ ||+++|||||+||||||++||||+|||++++++++||||+||++||+||+||
T Consensus 2 ~Srs~rAgL~FpVgrv~r~L~~~~~~~~rv~~~A~VyLaAvLEYL~aEILelagn~a~~~~~~rItpr~l~lai~nD~EL 81 (103)
T d1f66c_ 2 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 81 (103)
T ss_dssp CCHHHHHTCSSCHHHHHHHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHSHHH
T ss_pred CCccccCCcccChHHHHHHHhccCccceecCCCceeeHHHHHHHHHHHHHHHhhhhhccCCCCeeechhhhccccCcHHH
Confidence 578999999999999999999999985 7999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCceecCCcccCCcccccc
Q psy17765 214 NKLLSGVTIAQGGVLPNIQAVRV 236 (475)
Q Consensus 214 ~~Lf~~~tIa~gGV~p~i~~~ll 236 (475)
|+||+ +||++|||+|+||++||
T Consensus 82 ~~L~~-vti~~GGv~p~I~~~Ll 103 (103)
T d1f66c_ 82 DSLIK-ATIAGGGVIPHIHKSLI 103 (103)
T ss_dssp HHHCC-SEETTCCCCCCCCGGGC
T ss_pred HHHhC-eEeeCCeecccccHhhC
Confidence 99995 99999999999999986
No 5
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=100.00 E-value=1.5e-36 Score=254.12 Aligned_cols=92 Identities=93% Similarity=1.267 Sum_probs=90.0
Q ss_pred CchhHHHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHHHHH
Q psy17765 32 RKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS 111 (475)
Q Consensus 32 ~~~sf~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKhAvs 111 (475)
|+++|+.||||||||||||+|||++||.+||+||+|+|||||.||++|+++++|+|||+||||+||+++|||||+|||++
T Consensus 1 R~esy~~Yi~kVLKqVhp~~giS~kam~imnsfvndiferIa~EA~~La~~~kr~TitsreIqtAvrL~LPgeLaKhAvs 80 (92)
T d1tzyb_ 1 RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS 80 (92)
T ss_dssp CCCCCHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHCcHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc
Q psy17765 112 EGTKAVTKYTSS 123 (475)
Q Consensus 112 eG~kAV~ky~sS 123 (475)
||++||++|++|
T Consensus 81 eGtkAv~ky~ss 92 (92)
T d1tzyb_ 81 EGTKAVTKYTSS 92 (92)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHhccC
Confidence 999999999865
No 6
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=99.97 E-value=8.3e-33 Score=231.36 Aligned_cols=68 Identities=79% Similarity=1.104 Sum_probs=65.6
Q ss_pred CCccceeehhhhhccccCCCCCchHHHHHHhhHHHHHHhHhHHhhhcccccCCCcCCCCCc-hhheehc
Q psy17765 386 RKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITKDL-CPSVCLY 453 (475)
Q Consensus 386 ~~esy~~Yi~kvLkqvhp~~giS~kam~imnsfv~Diferia~Eas~L~~~~kr~Tltsr~-~~~~~~~ 453 (475)
|+|+|++||||||||||||+|||++||+||||||||||||||.||++|++||||+|||+|| |+||+|+
T Consensus 1 R~esy~~Yi~kVLKqVhp~~giS~kam~imnsfvndiferIa~EA~~La~~~kr~TitsreIqtAvrL~ 69 (92)
T d1tzyb_ 1 RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL 69 (92)
T ss_dssp CCCCCHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999986 8899883
No 7
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=99.89 E-value=4.5e-23 Score=186.05 Aligned_cols=139 Identities=17% Similarity=0.227 Sum_probs=130.1
Q ss_pred HHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHHHHHHhhhhh
Q psy17765 38 IYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 117 (475)
Q Consensus 38 ~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKhAvseG~kAV 117 (475)
..|+||+||++|+.+||.+|+++|++++++++++|+.||..||.+++|+|++.+||+.|++.++++++.+
T Consensus 5 a~I~rilk~~~~~~ris~da~~~l~~~~~~~~~~Ia~eA~~l~~~~~rKTi~~edi~~a~~~~~~~~~~~---------- 74 (151)
T d1f1ea_ 5 AAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADVLMVEGVED---------- 74 (151)
T ss_dssp HHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHHTCTTSTT----------
T ss_pred cHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHhcccccccc----------
Confidence 4699999999999999999999999999999999999999999999999999999999999988766643
Q ss_pred hhccccCCCCCCCCCCccCcCCCCCcccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcc
Q psy17765 118 TKYTSSKGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 197 (475)
Q Consensus 118 ~ky~sSkg~~~k~~~~~~srSsRagL~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~r 197 (475)
++++.||+++|.|++++. -..||+..|..+|+.++||++.+|++.|.++|.+.+++.
T Consensus 75 ----------------------~~~~~fp~a~IkRi~k~~-g~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~~~kRkT 131 (151)
T d1f1ea_ 75 ----------------------YDGELFGRATVRRILKRA-GIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKT 131 (151)
T ss_dssp ----------------------CCSCCCCHHHHHHHHHHT-TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred ----------------------cccCccCHHHHHHHHHcC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 347899999999999975 467999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhc
Q psy17765 198 IIPRHLQLAIRN 209 (475)
Q Consensus 198 ItP~hI~lAI~n 209 (475)
|+|+||+.||+.
T Consensus 132 I~~~DI~~Av~~ 143 (151)
T d1f1ea_ 132 VQGEDVEKAITY 143 (151)
T ss_dssp ECHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999974
No 8
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=8.6e-12 Score=96.92 Aligned_cols=65 Identities=22% Similarity=0.449 Sum_probs=59.6
Q ss_pred ccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHh
Q psy17765 144 QFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIR 208 (475)
Q Consensus 144 ~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~ 208 (475)
+||++||+++||.+....+|+..|+++++.++|||+.++++.|++.++..++++|+|+||..||.
T Consensus 2 ~fP~srVkkimk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krktI~~~dl~~ai~ 66 (66)
T d1jfia_ 2 RFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIE 66 (66)
T ss_dssp CCCHHHHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTTCC
T ss_pred CCChHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999999998863
No 9
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=99.09 E-value=1e-11 Score=111.06 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=55.1
Q ss_pred hhhhhccccCCCCCchHHHHHHhhHHHHHHhHhHHhhhcccccCCCcCCCCCch-hheeh
Q psy17765 394 IYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITKDLC-PSVCL 452 (475)
Q Consensus 394 i~kvLkqvhp~~giS~kam~imnsfv~Diferia~Eas~L~~~~kr~Tltsr~~-~~~~~ 452 (475)
|+|+|||+||+.+||.+||.+||+|++|+|++||.||..|+.+++|.||+++++ .++++
T Consensus 7 I~rilk~~~~~~ris~da~~~l~~~~~~~~~~Ia~eA~~l~~~~~rKTi~~edi~~a~~~ 66 (151)
T d1f1ea_ 7 IERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADV 66 (151)
T ss_dssp HHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999874 44454
No 10
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=1.8e-09 Score=85.79 Aligned_cols=73 Identities=22% Similarity=0.377 Sum_probs=69.5
Q ss_pred cchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccHHHHhhh
Q psy17765 145 FPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL 217 (475)
Q Consensus 145 FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL~~Lf 217 (475)
+|++||.|+||......+|+..|+++++.++|+++.++.+.|++.|++.+++.|+++||..||+++++++.|-
T Consensus 1 LP~srVkrImK~~~~~~~is~ea~~~i~~a~E~Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~~~~~~FL~ 73 (78)
T d1n1jb_ 1 LPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 73 (78)
T ss_dssp CCHHHHHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGGGGGT
T ss_pred CCHHHHHHHHhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhcCChhHHHH
Confidence 6999999999988788999999999999999999999999999999999999999999999999999987765
No 11
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=2.1e-09 Score=97.95 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=48.4
Q ss_pred CccceeehhhhhccccCCCCCchHHHHHHhhHHHHHHhHhHHhhhcccccCCCcCCCCCc-hhheeh
Q psy17765 387 KESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITKDL-CPSVCL 452 (475)
Q Consensus 387 ~esy~~Yi~kvLkqvhp~~giS~kam~imnsfv~Diferia~Eas~L~~~~kr~Tltsr~-~~~~~~ 452 (475)
+..|..||+|||+||||++||+.+||.+||+|++++|++|+ ...+.|.+| +.+|++
T Consensus 15 ~g~f~~~i~KVl~qvhP~l~i~~~Al~~i~~~i~~ll~~L~----------~~~p~sv~dVe~~v~~ 71 (172)
T d1q9ca_ 15 RGLLVPALKKVQGQVHPTLESNDDALQYVEELILQLLNMLC----------QAQPRSASDVEERVQK 71 (172)
T ss_dssp TTSSHHHHHHHHHHHCSSSBCCHHHHHHHHHHHHHHHHHHH----------TTCCCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH----------ccCCccHHHHHHHHHH
Confidence 45899999999999999999999999999999999999997 255667776 555554
No 12
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=98.07 E-value=3.7e-06 Score=64.50 Aligned_cols=64 Identities=28% Similarity=0.431 Sum_probs=60.0
Q ss_pred ccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHh
Q psy17765 144 QFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIR 208 (475)
Q Consensus 144 ~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~ 208 (475)
.+|.++|.|+++.+ ...||+..+...++-++|++..+|.+-|..++.+.+++.|+++||..|+.
T Consensus 3 eLP~a~I~ri~k~~-~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk 66 (68)
T d1htaa_ 3 ELPIAPIGRIIKNA-GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARK 66 (68)
T ss_dssp CSCHHHHHHHHHHT-TCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHH
Confidence 37999999999986 45799999999999999999999999999999999999999999999985
No 13
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=98.04 E-value=4.2e-06 Score=63.98 Aligned_cols=65 Identities=32% Similarity=0.468 Sum_probs=61.2
Q ss_pred ccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhc
Q psy17765 144 QFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRN 209 (475)
Q Consensus 144 ~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~n 209 (475)
++|.++|.|+++.+. ..||+..|...+.-++|.+..++.+-|..++...+++.|+++||..|+.+
T Consensus 2 ~LP~a~I~rI~k~~~-~~ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~s 66 (66)
T d1ku5a_ 2 ELPIAPVDRLIRKAG-AERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIKS 66 (66)
T ss_dssp CSCHHHHHHHHHHTT-CSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHTC
T ss_pred CCCHHHHHHHHHhCc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhC
Confidence 689999999999874 47999999999999999999999999999999999999999999999875
No 14
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=1.4e-05 Score=64.14 Aligned_cols=71 Identities=10% Similarity=0.190 Sum_probs=64.9
Q ss_pred cccchhHHHHHHhhc-CcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccHHH
Q psy17765 143 LQFPVGRIHRLLRKG-NYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 213 (475)
Q Consensus 143 L~FPVsRi~r~Lke~-~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL 213 (475)
|.||.++|.|+||+. ....+|+..|...++...|.+...+.+.|.+.|.+.+++.|+|+||..|+.+.+-+
T Consensus 1 l~LP~a~v~ri~K~~~p~~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~~~~ 72 (87)
T d1n1ja_ 1 IYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFD 72 (87)
T ss_dssp CCCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTTCG
T ss_pred CCCcHhHHHHHHHHhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHcCcH
Confidence 579999999999965 35679999999999999999999999999999999999999999999999987643
No 15
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=97.60 E-value=9.6e-05 Score=56.35 Aligned_cols=62 Identities=26% Similarity=0.355 Sum_probs=56.7
Q ss_pred HHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHh
Q psy17765 38 IYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 38 ~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrll 100 (475)
..|+|+.|...+ ..||.++...+...+..++..|+.+|...+...+|+|++.+||..|++.+
T Consensus 7 a~I~ri~k~~~~-~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~~ 68 (68)
T d1htaa_ 7 APIGRIIKNAGA-ERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKMF 68 (68)
T ss_dssp HHHHHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHTC
T ss_pred HHHHHHHHHCCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHhC
Confidence 468889998755 57999999999999999999999999999999999999999999999863
No 16
>d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.45 E-value=5.2e-06 Score=74.13 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=64.1
Q ss_pred hhHHHHHHhcccccc-----ccccccccccccccccCCcchhhhhccccCCCCcccchhhhccccccchhhhhhhc
Q psy17765 286 VLEEHLENATGLLVD-----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSLTTADLLSITMA 356 (475)
Q Consensus 286 Vfre~l~~~~~l~~~-----~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~~~~~~~m~ 356 (475)
+|.++|.....++.. ||+|+-+|+++.+.++..|+++++..++..+.|.+|.||.+++....|++|..|..
T Consensus 28 ~y~~pl~~~~~~~~~~~v~~iF~ni~~I~~~h~~fl~~Le~~~~~~~~~~~~~~ig~~f~~~~~~~~f~~Y~~Y~~ 103 (207)
T d1dbha1 28 VFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESYAR 103 (207)
T ss_dssp TTTHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCTTSSSCCCHHHHHHHHHTTTTHHHHHHHH
T ss_pred HHHHHHHhCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccccCCccchHHHHHHHHhHHhcccHHHHHHH
Confidence 788999887766654 99999999999999999999999999998899999999999998888999998864
No 17
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.27 E-value=0.00021 Score=61.75 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=64.8
Q ss_pred CcccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhcc
Q psy17765 142 GLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRND 210 (475)
Q Consensus 142 gL~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD 210 (475)
.|.||.++|.|+++..--..+|+..|...++-+.|.++..|...|...|...+++.|++.||..|+.+-
T Consensus 2 dl~LP~a~I~kI~K~~~~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~ 70 (135)
T d1jfib_ 2 DLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESL 70 (135)
T ss_dssp CCCCCHHHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHhhCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHc
Confidence 478999999999999776789999999999999999999999999999999999999999999999964
No 18
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=97.26 E-value=0.00025 Score=53.74 Aligned_cols=60 Identities=17% Similarity=0.335 Sum_probs=55.5
Q ss_pred HHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHH
Q psy17765 38 IYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVR 98 (475)
Q Consensus 38 ~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVr 98 (475)
..|+|+.|...| ..||.+|...+......++..|+.+|...+...+|+||+.+||..|++
T Consensus 6 a~I~rI~k~~~~-~ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 6 APVDRLIRKAGA-ERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp HHHHHHHHHTTC-SEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred HHHHHHHHhCcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 468899998765 589999999999999999999999999999999999999999999875
No 19
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.83 E-value=0.0015 Score=51.97 Aligned_cols=63 Identities=24% Similarity=0.370 Sum_probs=58.3
Q ss_pred HHHHHHhhccCCC-CCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHh
Q psy17765 38 IYIYKVLKQVHPD-TGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 38 ~yI~KVLKQVhPd-~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrll 100 (475)
..|.|+.|+.-|+ ..||.+|...|.....-+...|+.+|...+...+|+||+..||..|+..+
T Consensus 6 a~v~ri~K~~~p~~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~ 69 (87)
T d1n1ja_ 6 ANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTL 69 (87)
T ss_dssp HHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHT
T ss_pred hHHHHHHHHhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHc
Confidence 4589999988665 56999999999999999999999999999999999999999999999987
No 20
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.64 E-value=0.0013 Score=49.76 Aligned_cols=60 Identities=12% Similarity=0.209 Sum_probs=50.9
Q ss_pred HHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHH
Q psy17765 38 IYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAV 97 (475)
Q Consensus 38 ~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAV 97 (475)
..|+|++|.......||.+|...|.-....+...|+.+|...+..++|+||+.+||..||
T Consensus 6 srVkkimk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krktI~~~dl~~ai 65 (66)
T d1jfia_ 6 ARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCI 65 (66)
T ss_dssp HHHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTTC
T ss_pred HHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHh
Confidence 468999998744457999999999999999999999999999999999999999998775
No 21
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.57 E-value=0.0023 Score=54.93 Aligned_cols=63 Identities=19% Similarity=0.361 Sum_probs=60.1
Q ss_pred HHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHh
Q psy17765 38 IYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 38 ~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrll 100 (475)
.-|.|+.|..-|+..||.+|...|.....-++..|+.+|...|...+|+||+..||..|+..+
T Consensus 8 a~I~kI~K~~~~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~ 70 (135)
T d1jfib_ 8 AAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESL 70 (135)
T ss_dssp HHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHc
Confidence 458999999999999999999999999999999999999999999999999999999999987
No 22
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.56 E-value=0.0015 Score=52.12 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=59.4
Q ss_pred chhHHHHHHhhc-CcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhcc
Q psy17765 146 PVGRIHRLLRKG-NYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRND 210 (475)
Q Consensus 146 PVsRi~r~Lke~-~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD 210 (475)
|.++|.|+|++. .-..+|+..|...++-+.|.++..+.+.|...|...+++.|+++||..|+.+-
T Consensus 1 P~a~i~ri~K~~~p~~~~iskeA~~~i~~aae~FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~ 66 (89)
T d2bykb1 1 PNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTEL 66 (89)
T ss_dssp CCSHHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred CccHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHC
Confidence 789999999864 34579999999999999999999999999999999999999999999999853
No 23
>d2byka1 a.22.1.3 (A:29-100) Chrac-16 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.53 E-value=0.0013 Score=50.89 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=54.2
Q ss_pred hhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHh-cCCcccchhHHHHHHhccHHHHhhhc
Q psy17765 155 RKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARD-NKKTRIIPRHLQLAIRNDEELNKLLS 218 (475)
Q Consensus 155 ke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~-~k~~rItP~hI~lAI~nD~EL~~Lf~ 218 (475)
|-+.....|+..|++.++-..|.++.++.+.|.+.+.. .+++.|++.||..||.+++.|+.|-.
T Consensus 2 k~d~dv~~is~ea~~lvskAtElFi~~L~~~a~~~a~~~~~~ktl~~~dl~~aV~~~~~f~FL~d 66 (72)
T d2byka1 2 KSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLEFLLQ 66 (72)
T ss_dssp CSSSSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTCSTTGGGTT
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccHHHHHHHHccCchhhHHHH
Confidence 34455678999999999999999999999999877754 45578999999999999999887653
No 24
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.52 E-value=0.0026 Score=50.72 Aligned_cols=65 Identities=23% Similarity=0.324 Sum_probs=58.2
Q ss_pred HHHHHhhccCCC-CCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHh-CcH
Q psy17765 39 YIYKVLKQVHPD-TGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLL-LPG 103 (475)
Q Consensus 39 yI~KVLKQVhPd-~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrll-LPg 103 (475)
-|.|+.|+.-|+ ..||++|...+.....-++..|+.+|...+..++|+||+..||..|+..+ |..
T Consensus 4 ~i~ri~K~~~p~~~~iskeA~~~i~~aae~FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~~f~~ 70 (89)
T d2bykb1 4 VIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFES 70 (89)
T ss_dssp HHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHCCcHH
Confidence 478999987555 67999999999999999999999999999999999999999999999987 443
No 25
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.02 E-value=0.0072 Score=46.69 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=55.1
Q ss_pred HHHHHHhhccCCC-CCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHh
Q psy17765 38 IYIYKVLKQVHPD-TGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 38 ~yI~KVLKQVhPd-~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrll 100 (475)
..|+|+.|. .|+ ..+|++|...+.--..-+...|+.+|..-+..++|+||+.+||..||+..
T Consensus 4 srVkrImK~-~~~~~~is~ea~~~i~~a~E~Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~~ 66 (78)
T d1n1jb_ 4 ARIKKIMKL-DEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF 66 (78)
T ss_dssp HHHHHHHTT-STTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTC
T ss_pred HHHHHHHhc-CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhcC
Confidence 458899886 566 56999999999999999999999999999999999999999999998753
No 26
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=95.98 E-value=0.0044 Score=49.00 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=55.1
Q ss_pred HHHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHH
Q psy17765 36 YAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRL 99 (475)
Q Consensus 36 f~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrl 99 (475)
-...|.|+.+..- --.||.++.+.+...+.+.++.|+.+|..++...+|+|+|..||..|++.
T Consensus 11 ~k~~i~Riar~~G-v~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr 73 (82)
T d2huec1 11 TKPAIRRLARRGG-VKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 73 (82)
T ss_dssp CHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred CHHHHHHHHHHcC-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 3457888887752 23599999999999999999999999999999999999999999998874
No 27
>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=95.57 E-value=0.013 Score=47.62 Aligned_cols=68 Identities=21% Similarity=0.263 Sum_probs=63.4
Q ss_pred CchhHHHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHH
Q psy17765 32 RKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRL 99 (475)
Q Consensus 32 ~~~sf~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrl 99 (475)
++-.|+-.++.+.....+++.++.+|+..|..-..+.+..+-+.|..++.+.+|-|++++|++-|.++
T Consensus 23 pk~pF~RLVRei~~~~~~~~r~~~~Al~aLQea~E~yLv~lfeda~~~a~HakRvTl~~kD~~Larri 90 (95)
T d1tzyc_ 23 RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 90 (95)
T ss_dssp CHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCCCCEeeHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCcCCHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999999999999999999999998876
No 28
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=95.57 E-value=0.018 Score=45.30 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=58.9
Q ss_pred cchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccH
Q psy17765 145 FPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDE 211 (475)
Q Consensus 145 FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~ 211 (475)
+|-.-|.|+.+.+. ..||+..+.--|..++||...+|+.-|...+...+++.|+++||..|++...
T Consensus 10 I~k~~i~Riar~~G-v~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr~g 75 (82)
T d2huec1 10 ITKPAIRRLARRGG-VKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 75 (82)
T ss_dssp SCHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTTC
T ss_pred cCHHHHHHHHHHcC-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHhcC
Confidence 56667888888754 4699999999999999999999999999999999999999999999998653
No 29
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.98 E-value=0.035 Score=43.12 Aligned_cols=61 Identities=16% Similarity=0.369 Sum_probs=56.3
Q ss_pred HHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHH
Q psy17765 39 YIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRL 99 (475)
Q Consensus 39 yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrl 99 (475)
-|...++|+-|+..+..++-+.+-.+..++.+.++.-|++||.+.+..|+.++|||.....
T Consensus 8 ~L~eLv~~idp~~~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s~~le~kDvql~LeR 68 (74)
T d1h3ob_ 8 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLER 68 (74)
T ss_dssp HHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHh
Confidence 3677889999999999999999999999999999999999999999999999999987765
No 30
>d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=93.35 E-value=0.077 Score=43.70 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=57.2
Q ss_pred HHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHH
Q psy17765 37 AIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKH 108 (475)
Q Consensus 37 ~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKh 108 (475)
...|+|.|++.+-...++..|--+|...+..+...|.+.|..-++.+++..||+++||-||+- ..||.+-
T Consensus 15 V~rv~r~Lk~~~~~~rv~~~apVylaAVLEYLtaEiLELAgn~a~~~k~~rItPrhi~lAirn--DeeL~~L 84 (106)
T d1tzya_ 15 VGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN--DEELNKL 84 (106)
T ss_dssp HHHHHHHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT--SHHHHHH
T ss_pred hHHHHHHHHcCccccccCCCchHHHHHHHHHHHHHHHHHhhHHHHhcCCceecchhhhhcccC--HHHHHHH
Confidence 456999999976666889999888888887777777777777888999999999999999986 4555543
No 31
>d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.30 E-value=0.06 Score=44.37 Aligned_cols=69 Identities=23% Similarity=0.244 Sum_probs=59.0
Q ss_pred HHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHH
Q psy17765 37 AIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAK 107 (475)
Q Consensus 37 ~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaK 107 (475)
...|+|.|++-+....|+..|--+|...+..+...|.+.|..-++.+++..||+++||-||+- ..||.+
T Consensus 14 V~ri~r~Lk~~~~~~rv~~~apVylaAVLEYL~aEILELAgn~a~~~k~~rItprhi~lairn--D~EL~~ 82 (106)
T d1u35c1 14 VGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAN--DEELNQ 82 (106)
T ss_dssp HHHHHHHHHHHSTTSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH--SHHHHH
T ss_pred HHHHHHHHhCCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHcCCCeeecchhhhcccC--HHHHHH
Confidence 356899999987777899999999999888888888888888899999999999999999987 455544
No 32
>d1f66c_ a.22.1.1 (C:) Histone H2A {Human (Homo sapiens), variant H2A.Z [TaxId: 9606]}
Probab=90.76 E-value=0.24 Score=40.30 Aligned_cols=69 Identities=20% Similarity=0.141 Sum_probs=56.2
Q ss_pred HHHHHHhhccCCC-CCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHH
Q psy17765 38 IYIYKVLKQVHPD-TGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKH 108 (475)
Q Consensus 38 ~yI~KVLKQVhPd-~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKh 108 (475)
..|+|.|+..+-. ..|+..|--+|...+..+...|.+.|..-+..+++..||+++|+-||+- ..||.+-
T Consensus 15 grv~r~L~~~~~~~~rv~~~A~VyLaAvLEYL~aEILelagn~a~~~~~~rItpr~l~lai~n--D~EL~~L 84 (103)
T d1f66c_ 15 GRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRG--DEELDSL 84 (103)
T ss_dssp HHHHHHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH--SHHHHHH
T ss_pred HHHHHHHhccCccceecCCCceeeHHHHHHHHHHHHHHHhhhhhccCCCCeeechhhhccccC--cHHHHHH
Confidence 4578888877654 3488889888888888888888888888888999999999999999997 5666553
No 33
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.40 E-value=0.26 Score=39.28 Aligned_cols=63 Identities=22% Similarity=0.379 Sum_probs=55.5
Q ss_pred cchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcC-CcccchhHHHHHHh
Q psy17765 145 FPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNK-KTRIIPRHLQLAIR 208 (475)
Q Consensus 145 FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k-~~rItP~hI~lAI~ 208 (475)
||=+.|.++++. ..++.|+....+.++++---+..||+|.|.......+ ...|.|.||..|.+
T Consensus 17 ~~K~~vkrl~~~-~~g~sv~~~v~i~v~giaKvFvGEiVE~A~~V~~~~~e~~PL~P~HireA~r 80 (89)
T d1bh9b_ 17 FPKAAIKRLIQS-ITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVR 80 (89)
T ss_dssp CCHHHHHHHHHH-HHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHH
Confidence 888999999986 5678999999999999999999999999988865544 45899999999876
No 34
>d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.36 E-value=0.024 Score=49.69 Aligned_cols=135 Identities=12% Similarity=0.104 Sum_probs=83.4
Q ss_pred hhHHHHHHhcccccc----ccccccccccccccccCCcchhhhhccccCCCCcccchhhhccccccchhhhhhhccCCcC
Q psy17765 286 VLEEHLENATGLLVD----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSLTTADLLSITMAAGKSS 361 (475)
Q Consensus 286 Vfre~l~~~~~l~~~----~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~~~~~~~m~~~~~~ 361 (475)
+|.++|....-+..+ +|+|+-+|.++...++..|+..++...+..++..+|.||..+.. .+++|..|++.-...
T Consensus 34 ~y~~~l~~~~~l~~~~~~~lF~~i~~l~~~h~~~l~~L~~~~~~~~~~~~~~~ig~~f~~~~~--~~~~Y~~Y~~~~~~~ 111 (210)
T d1ki1b1 34 IFQKPLMESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGDILSAQLP--HMQPYIRFCSRQLNG 111 (210)
T ss_dssp HTHHHHHHHTSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCHHHHHHHGG--GGTHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHH--HhhHHHHHHHcChHH
Confidence 567777664322222 99999999999999999999999988887788899999998865 478999887642111
Q ss_pred ccchhccccc--------cc-cccccCCcc--------CcCCCccceeehhhhhccc---cCCCCCchHHHHHHhhHHHH
Q psy17765 362 GKAVKKAGKA--------QK-NITKSDKKK--------KPRRKESYAIYIYKVLKQV---HPDTGVSSKAMSIMNSFVND 421 (475)
Q Consensus 362 ~k~~~~~~~~--------~~-~~~~~~~k~--------~~~~~esy~~Yi~kvLkqv---hp~~giS~kam~imnsfv~D 421 (475)
...-.+..+. +. ......++- --.|-..|...+-.++|.. |||...=..|...+..++..
T Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~PvqRl~rY~llL~~l~k~t~~~~~d~~~l~~a~~~~~~~~~~ 191 (210)
T d1ki1b1 112 AALIQQKTDEAPDFKEFVKRLEMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQ 191 (210)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHTTSCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHHhhCcccccCCHHHHHHhHHhHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHHHH
Confidence 1100000000 00 000000000 0012234667777777765 67766667777777777554
Q ss_pred H
Q psy17765 422 I 422 (475)
Q Consensus 422 i 422 (475)
+
T Consensus 192 v 192 (210)
T d1ki1b1 192 V 192 (210)
T ss_dssp H
T ss_pred H
Confidence 4
No 35
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=90.25 E-value=0.29 Score=37.38 Aligned_cols=48 Identities=19% Similarity=0.356 Sum_probs=42.2
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHH
Q psy17765 52 GVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRL 99 (475)
Q Consensus 52 ~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrl 99 (475)
.++.++...|..=+..=+..|.+||.++++..+|.++|.+||-.|.|+
T Consensus 23 ~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALkv 70 (70)
T d1tafb_ 23 SLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKV 70 (70)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHcC
Confidence 478888888888787778899999999999999999999999998764
No 36
>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=89.03 E-value=0.51 Score=37.84 Aligned_cols=67 Identities=25% Similarity=0.255 Sum_probs=58.7
Q ss_pred CcccchhHHHHHHhhc----CcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHh
Q psy17765 142 GLQFPVGRIHRLLRKG----NYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIR 208 (475)
Q Consensus 142 gL~FPVsRi~r~Lke~----~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~ 208 (475)
+|.+|-.-|.|+.++- ....|+.++|-..|=-..|....+++|-|...|.+.++..|+|.|+++|.+
T Consensus 19 ~lLIpk~pF~RLVRei~~~~~~~~r~~~~Al~aLQea~E~yLv~lfeda~~~a~HakRvTl~~kD~~Larr 89 (95)
T d1tzyc_ 19 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 89 (95)
T ss_dssp SCCSCHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHhcCCCCEeeHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCcCCHHHHHHHHH
Confidence 5889999999988872 123699999999999999999999999999999999999999999998864
No 37
>d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.75 E-value=0.046 Score=47.69 Aligned_cols=68 Identities=9% Similarity=-0.120 Sum_probs=50.9
Q ss_pred hhHHHHHHhcccccc-----ccccccccccccccccCCcchhhhhccccCCCCcccchhhhccccccchhhhhhhcc
Q psy17765 286 VLEEHLENATGLLVD-----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSLTTADLLSITMAA 357 (475)
Q Consensus 286 Vfre~l~~~~~l~~~-----~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~~~~~~~m~~ 357 (475)
+|.++|......+.+ +|+|+-+++++...++..|++.++- .+...+.+|.||..+.+ .+++|..|+..
T Consensus 39 ~y~~~l~~~~~~l~~~~~~~lF~ni~~l~~~h~~~l~~L~~~~~~--~~~~~~~ig~~f~~~~~--~~~~Y~~Y~~~ 111 (203)
T d2dfka1 39 GYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNN--DDPHLSEIGPCFLEHQD--GFWIYSEYCNN 111 (203)
T ss_dssp HTHHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCS--SCGGGCCCHHHHHHTTT--GGGHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHcc--CCccHHHHHHHHHHHHH--hHHHHHHHHHh
Confidence 666667665555544 9999999999999988888776542 33345789999988765 57899999765
No 38
>d2byka1 a.22.1.3 (A:29-100) Chrac-16 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=83.73 E-value=1.3 Score=33.27 Aligned_cols=55 Identities=11% Similarity=0.169 Sum_probs=43.2
Q ss_pred ccCCCCC-cChHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCChHHHHHHHHHh
Q psy17765 46 QVHPDTG-VSSKAMSIMNSFVNDIFERIAAESSRLAH-YNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 46 QVhPd~~-IS~~Am~imns~v~diferIa~EA~~L~~-~~kr~TlT~rdIqtAVrll 100 (475)
|--||.+ ||++|.-.+.--..-+.+.++.+|...+. .++++|++..||..||...
T Consensus 2 k~d~dv~~is~ea~~lvskAtElFi~~L~~~a~~~a~~~~~~ktl~~~dl~~aV~~~ 58 (72)
T d2byka1 2 KSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKN 58 (72)
T ss_dssp CSSSSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTC
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccHHHHHHHHccC
Confidence 3467775 88888888877777778888999877664 5566899999999998753
No 39
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.75 E-value=0.31 Score=37.55 Aligned_cols=55 Identities=16% Similarity=0.340 Sum_probs=46.0
Q ss_pred hhhhhccccCCCCCchHHHHHHhhHHHHHHhHhHHhhhcccccCCCcCCCCCchh
Q psy17765 394 IYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITKDLCP 448 (475)
Q Consensus 394 i~kvLkqvhp~~giS~kam~imnsfv~Diferia~Eas~L~~~~kr~Tltsr~~~ 448 (475)
+...++||-|+..|...+-.++--+.+|--+.+..-|.+||++.+-.||..++++
T Consensus 9 L~eLv~~idp~~~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s~~le~kDvq 63 (74)
T d1h3ob_ 9 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQ 63 (74)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHH
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 5567899999999999998777666666666677889999999999999998865
No 40
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=81.35 E-value=2.1 Score=36.72 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=51.0
Q ss_pred HHHHHHHHhhccCCCCCcChHHHHHHHHHH------------HHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhC
Q psy17765 36 YAIYIYKVLKQVHPDTGVSSKAMSIMNSFV------------NDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLL 101 (475)
Q Consensus 36 f~~yI~KVLKQVhPd~~IS~~Am~imns~v------------~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllL 101 (475)
...++.+.++..+.+..++.++++.+.... -+-...++++|..++..+.+.++|.+||+.|.+.++
T Consensus 197 ~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~ 274 (276)
T d1fnna2 197 IFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVL 274 (276)
T ss_dssp HHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHh
Confidence 455667777777777788999988876553 123455677888899889999999999999998875
No 41
>d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.65 E-value=0.095 Score=46.17 Aligned_cols=63 Identities=11% Similarity=-0.131 Sum_probs=48.4
Q ss_pred hhHHHHHHhcccccc-----ccccccccccccccccCCcchhhhhccccCCCCcccchhhhccccccchhhhhhhcc
Q psy17765 286 VLEEHLENATGLLVD-----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSLTTADLLSITMAA 357 (475)
Q Consensus 286 Vfre~l~~~~~l~~~-----~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~~~~~~~m~~ 357 (475)
+|.++|.. ++++ +|+||-+|..+.+.|+..|++.++- .....+|.||-.+.+ .+++|..|...
T Consensus 52 ~y~~pL~~---~l~~~~~~~iF~ni~~i~~~h~~~l~~L~~~~~~----~~~~~ig~~f~~~~~--~~~~Y~~Y~~~ 119 (208)
T d1f5xa_ 52 HFMKPLQR---FLKPQDMETIFVNIEELFSVHTHFLKELKDALAG----PGATTLYQVFIKYKE--RFLVYGRYCSQ 119 (208)
T ss_dssp TTHHHHTT---TSCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHS----SCGGGHHHHHHSTHH--HHTHHHHHHHH
T ss_pred HHHHHHHh---hCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHcC----chhhHHHHHHHHHHH--HHHHHHHHHHc
Confidence 56666653 3333 9999999999999999999877653 344678999998876 68899988765
No 42
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=77.88 E-value=1.1 Score=36.29 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=34.2
Q ss_pred HHHHHHHhHHHHhcCCcccchhHHHHHHhccHHHHhhhc
Q psy17765 180 AEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLS 218 (475)
Q Consensus 180 aEILELAgn~A~~~k~~rItP~hI~lAI~nD~EL~~Lf~ 218 (475)
.++|..|-+.|...++..|+|+||-.|+-+|++...++.
T Consensus 7 ~~~l~~A~~~A~~~~h~~i~~EHLL~aLl~~~~~~~~l~ 45 (142)
T d1k6ka_ 7 ELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALE 45 (142)
T ss_dssp HHHHHHHHHHHHHHTBSEECHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcccHHHHHHHHHhchhHHHHHH
Confidence 567889999999999999999999999999988665554
No 43
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=77.24 E-value=3.6 Score=31.04 Aligned_cols=65 Identities=9% Similarity=0.132 Sum_probs=55.7
Q ss_pred cccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHh
Q psy17765 143 LQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIR 208 (475)
Q Consensus 143 L~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~ 208 (475)
-+||.+-|+-+-.. .-...++..++-.||-=.||=..||++-|.+..++.+++++|.+||..|++
T Consensus 5 S~~~~esik~iAeS-~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 5 SSISAESMKVIAES-IGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp CCCCHHHHHHHHHH-TTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred ccCCHHHHHHHHHH-cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 46787777766642 333578999999999999999999999999999999999999999999874
No 44
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=70.75 E-value=5.6 Score=34.00 Aligned_cols=62 Identities=10% Similarity=0.038 Sum_probs=45.8
Q ss_pred HHHHHHHhhccCCCCCcChHHHHHHHHHH---------HHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHH
Q psy17765 37 AIYIYKVLKQVHPDTGVSSKAMSIMNSFV---------NDIFERIAAESSRLAHYNKRSTITSREIQTAVR 98 (475)
Q Consensus 37 ~~yI~KVLKQVhPd~~IS~~Am~imns~v---------~diferIa~EA~~L~~~~kr~TlT~rdIqtAVr 98 (475)
...+.+.+++.+.+..++.+++..+..+. -+-...++.+|..++...++..||..+|+.|+.
T Consensus 215 ~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~ 285 (287)
T d1w5sa2 215 YTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVS 285 (287)
T ss_dssp HHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HHHHhhhHHHhhccCCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 34455555666677789999988876654 112335678888899888999999999999985
No 45
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=67.69 E-value=2.2 Score=34.23 Aligned_cols=40 Identities=30% Similarity=0.262 Sum_probs=33.5
Q ss_pred HHHHHHHHhHHHHhcCCcccchhHHHHHHhccHH--HHhhhc
Q psy17765 179 AAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEE--LNKLLS 218 (475)
Q Consensus 179 taEILELAgn~A~~~k~~rItP~hI~lAI~nD~E--L~~Lf~ 218 (475)
+.++|..|-..|...++..|+|+||-+|+-+|++ ...++.
T Consensus 7 ~~~~l~~A~~~A~~~~h~~v~~eHlL~all~~~~~~~~~iL~ 48 (139)
T d1khya_ 7 FQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLT 48 (139)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHTCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHHHHHhCcccHHHHHHH
Confidence 3578999999999999999999999999987664 455554
No 46
>d1qvra1 a.174.1.1 (A:4-148) N-terminal domain of ClpB (heat shock protein F84.1) {Thermus thermophilus [TaxId: 274]}
Probab=63.03 E-value=2.9 Score=34.45 Aligned_cols=41 Identities=32% Similarity=0.236 Sum_probs=35.4
Q ss_pred HHHHHHHHhHHHHhcCCcccchhHHHHHHhccHH--HHhhhcC
Q psy17765 179 AAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEE--LNKLLSG 219 (475)
Q Consensus 179 taEILELAgn~A~~~k~~rItP~hI~lAI~nD~E--L~~Lf~~ 219 (475)
+.++|+.|-+.|...++..|+|.||-.|+-+|++ +..++..
T Consensus 7 a~~~l~~A~~~A~~~~~~~i~~~HlL~all~~~~~~~~~iL~~ 49 (145)
T d1qvra1 7 AREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEK 49 (145)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHHHHCCSSSSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHHHHHcCCcchHHHHHHH
Confidence 4678999999999999999999999999987765 6777764
No 47
>d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.50 E-value=1.1 Score=38.01 Aligned_cols=65 Identities=5% Similarity=-0.173 Sum_probs=43.1
Q ss_pred hhHHHHHHhccccc--------cccccccccccccccc-cCCcchhhhhccccCCCCcccchhhhccccccchhhhhhhc
Q psy17765 286 VLEEHLENATGLLV--------DESGNTLDSTSTRQTT-DGGLGDSLDVVTEYFPVPLGASFSESLSSLTTADLLSITMA 356 (475)
Q Consensus 286 Vfre~l~~~~~l~~--------~~f~n~ld~~e~~~~~-~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~~~~~~~m~ 356 (475)
+|.++|........ .+|+|+-+++++..++ +..|+.. . .....+|.||..+.. .+++|..|+.
T Consensus 28 ~y~~pl~~~~~~~~~~~~~~~~~iF~ni~~i~~~h~~~ll~~l~~~----~--~~~~~ig~~fl~~~~--~~~~Y~~Y~~ 99 (184)
T d1ntya1 28 TYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKY----E--QLPEDVGHCFVTWAD--KFQMYVTYCK 99 (184)
T ss_dssp HHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHHHHTHHHHHHHT----T--TCGGGTHHHHHHTTT--TTHHHHHHHH
T ss_pred HHHHHHHhhcccCCccchhHHHHHHhhHHHHHHHHHHHHHHHHHHh----h--cCchHHHHHHHHHHH--HHHHHHHHHh
Confidence 56666665433221 1999999999987664 3333321 1 223579999999864 6899999977
Q ss_pred cC
Q psy17765 357 AG 358 (475)
Q Consensus 357 ~~ 358 (475)
..
T Consensus 100 ~~ 101 (184)
T d1ntya1 100 NK 101 (184)
T ss_dssp HH
T ss_pred CH
Confidence 63
No 48
>d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.29 E-value=0.42 Score=41.08 Aligned_cols=71 Identities=17% Similarity=-0.025 Sum_probs=49.9
Q ss_pred hhHHHHHHhcccccc----ccccccccccccccccCCcchhhhhccccC----------CCCcccchhhhccccccchhh
Q psy17765 286 VLEEHLENATGLLVD----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYF----------PVPLGASFSESLSSLTTADLL 351 (475)
Q Consensus 286 Vfre~l~~~~~l~~~----~f~n~ld~~e~~~~~~g~leD~le~~~e~~----------~~p~~gs~fe~la~~~~~~~~ 351 (475)
+|.++|....-+..+ +|+|+-+|..+...++..|++.+....... .+..+|.||..++.. +.+|
T Consensus 32 ~y~~~l~~~~~l~~~~~~~lF~ni~~l~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~~~~~~ig~~f~~~~~~--~~~Y 109 (206)
T d1foea1 32 RYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADR--FKLY 109 (206)
T ss_dssp HTHHHHHTSSSSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSSCGGGCCSGGGGHHHHHHHHHHHHHHTTG--GGGH
T ss_pred HHHHHHHhCCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhccccchHhHHHHHHHHHHHH--HHHH
Confidence 566666543323222 999999999999999999998876543211 123589999887655 5799
Q ss_pred hhhhccC
Q psy17765 352 SITMAAG 358 (475)
Q Consensus 352 ~~~m~~~ 358 (475)
..|+..-
T Consensus 110 ~~Y~~~~ 116 (206)
T d1foea1 110 SAFCASH 116 (206)
T ss_dssp HHHHHHT
T ss_pred HHHHhCC
Confidence 8887753
No 49
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=57.80 E-value=13 Score=27.74 Aligned_cols=61 Identities=16% Similarity=0.270 Sum_probs=45.4
Q ss_pred HHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCChHHHHHHHHHhC
Q psy17765 40 IYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLL 101 (475)
Q Consensus 40 I~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~~~kr~TlT~rdIqtAVrllL 101 (475)
|+-+|+.-. =..-.......|=.|..+-.-.|..+|.-.+...++++++..||+.|+...+
T Consensus 7 i~~iL~~~G-V~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~~r~ 67 (68)
T d1tafa_ 7 IMSILKELN-VQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEVTL 67 (68)
T ss_dssp HHHHHHHTT-CCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTC
T ss_pred HHHHHHHcC-CccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhcc
Confidence 445555421 1123456667777777888888999999999999999999999999997643
No 50
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=55.63 E-value=21 Score=26.50 Aligned_cols=56 Identities=23% Similarity=0.277 Sum_probs=40.3
Q ss_pred HHHHHhhcCcccccCCChhHHHHHHHHHH---HHHHHHHHhHHHHhcCCcccchhHHHHHHhc
Q psy17765 150 IHRLLRKGNYAERVGAGAPVYLAAVMEYL---AAEVLELAGNAARDNKKTRIIPRHLQLAIRN 209 (475)
Q Consensus 150 i~r~Lke~~~~~RI~~~A~VYLaAVLEYL---taEILELAgn~A~~~k~~rItP~hI~lAI~n 209 (475)
|+.+|++.. |...-|-...-.||+. +.+||+=|--++.+.++..|+..|+++||..
T Consensus 7 i~~iL~~~G----V~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~~ 65 (68)
T d1tafa_ 7 IMSILKELN----VQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEV 65 (68)
T ss_dssp HHHHHHHTT----CCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHcC----CccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHh
Confidence 566676643 3343444444455544 6789999988999999999999999999974
No 51
>d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.05 E-value=0.8 Score=39.98 Aligned_cols=67 Identities=15% Similarity=-0.030 Sum_probs=46.5
Q ss_pred hhHHHHHHhcccc----ccccccccccccccccccCCcchhhhhccccCCCCcccchhhhccccccc-hhhhhhhcc
Q psy17765 286 VLEEHLENATGLL----VDESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSLTTA-DLLSITMAA 357 (475)
Q Consensus 286 Vfre~l~~~~~l~----~~~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~~~~-~~~~~~m~~ 357 (475)
+|.++|.....+. ..+|+|+-+|+++...++..|++..+. ....+.+|.||..++. .+ ++|..|...
T Consensus 38 ~y~~pl~~~~~l~~~~~~~lF~ni~~l~~~h~~~l~~L~~~~~~---~~~~~~ig~~fl~~~~--~~~~~Y~~Y~~~ 109 (209)
T d1by1a_ 38 TYLRPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKL---PEAQQRVGGCFLNLMP--QMKTLYLTYCAN 109 (209)
T ss_dssp HHHHHHTTTSSSSSSGGGTTHHHHHHHHHHHHHHHHHHHHHHHT---TCSSCCHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhC---CccHhHHHHHHHHHHH--HHHHHHHHHHHh
Confidence 5566665332221 129999999999999998888876553 3456789999987754 23 578888654
No 52
>d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.92 E-value=1.2 Score=38.61 Aligned_cols=69 Identities=3% Similarity=-0.166 Sum_probs=48.6
Q ss_pred hhHHHHHHhccccc----cccccccccccccccccCCcchhhhhccccCCCCcccchhhhcccc----ccchhhhhhhcc
Q psy17765 286 VLEEHLENATGLLV----DESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSL----TTADLLSITMAA 357 (475)
Q Consensus 286 Vfre~l~~~~~l~~----~~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~----~~~~~~~~~m~~ 357 (475)
+|.++|.....+.. .+|+|+.++.++...++..|++.+ +++...+.+|.||-..... .-+.+|..|...
T Consensus 46 ~y~~~l~~~~~l~~~~~~~lF~~i~~l~~~h~~fl~~L~~~~---~~~~~~~~ig~~~~~~~~~~~~~~~~~~Y~~Y~~~ 122 (228)
T d1xcga1 46 IFYQRMKKENLMPREELARLFPNLPELIEIHNSWCEAMKKLR---EEGPIIKEISDLMLARFDGPAREELQQVAAQFCSY 122 (228)
T ss_dssp HTHHHHHHTTSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHH---HTCSSCCCCHHHHHHHHSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---hcCCccccHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 66666665332222 299999999999999988888765 3456688999999765543 225678877654
No 53
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=41.30 E-value=10 Score=30.05 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHHHHHHhHHHHhcCCcccchhHHHHHHhccHH--HHhhhcC
Q psy17765 180 AEVLELAGNAARDNKKTRIIPRHLQLAIRNDEE--LNKLLSG 219 (475)
Q Consensus 180 aEILELAgn~A~~~k~~rItP~hI~lAI~nD~E--L~~Lf~~ 219 (475)
..+|+.|...|+..+...|+++|+-+|+.++++ ...+++.
T Consensus 85 ~~il~~A~~~a~~~~~~~i~~ehlLlall~~~~~~a~~lL~~ 126 (142)
T d1k6ka_ 85 QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK 126 (142)
T ss_dssp HHHHHHHHHHHHSSSCSCBCHHHHHHHHTTCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHccCcHHHHHHHH
Confidence 456788889999999999999999999986654 5667753
No 54
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.48 E-value=48 Score=25.54 Aligned_cols=63 Identities=16% Similarity=0.310 Sum_probs=51.3
Q ss_pred HHHHHHHhhccCCCCCcChHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCChHHHHHHHHHh
Q psy17765 37 AIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAESSRLAH-YNKRSTITSREIQTAVRLL 100 (475)
Q Consensus 37 ~~yI~KVLKQVhPd~~IS~~Am~imns~v~diferIa~EA~~L~~-~~kr~TlT~rdIqtAVrll 100 (475)
+.-|+|+..++. +.++|....-.|..+-.=+.-.|.++|..... .....+|.+.+|..|+|.+
T Consensus 19 K~~vkrl~~~~~-g~sv~~~v~i~v~giaKvFvGEiVE~A~~V~~~~~e~~PL~P~HireA~rrl 82 (89)
T d1bh9b_ 19 KAAIKRLIQSIT-GTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRL 82 (89)
T ss_dssp HHHHHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHH
Confidence 456888888886 57899988888988888888888888888875 3345689999999999876
No 55
>d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=38.72 E-value=2.2 Score=37.14 Aligned_cols=70 Identities=9% Similarity=-0.127 Sum_probs=47.7
Q ss_pred hhHHHHHHhcccccc-----ccccccccccccccccCCcchhhhhccccCCCCcccchhhhcccc----ccchhhhhhhc
Q psy17765 286 VLEEHLENATGLLVD-----ESGNTLDSTSTRQTTDGGLGDSLDVVTEYFPVPLGASFSESLSSL----TTADLLSITMA 356 (475)
Q Consensus 286 Vfre~l~~~~~l~~~-----~f~n~ld~~e~~~~~~g~leD~le~~~e~~~~p~~gs~fe~la~~----~~~~~~~~~m~ 356 (475)
+|.++|.... ++.+ +|+|+-+|+++.+.++..|++....- ++..++-+|.||-+.... .-+++|..|..
T Consensus 47 ~y~~~l~~~~-~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~Y~~Y~~ 124 (234)
T d1txda1 47 VFYQRVSREG-ILSPSELRKIFSNLEDILQLHIGLNEQMKAVRKRN-ETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCS 124 (234)
T ss_dssp HTHHHHHHHT-CSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTC-TTCCCCCCHHHHHHHHSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC-CCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcc-cCCccchHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 6677776532 3332 99999999999999998888765553 335567788888776532 23556776654
Q ss_pred c
Q psy17765 357 A 357 (475)
Q Consensus 357 ~ 357 (475)
.
T Consensus 125 ~ 125 (234)
T d1txda1 125 N 125 (234)
T ss_dssp T
T ss_pred H
Confidence 3
No 56
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=35.91 E-value=15 Score=28.87 Aligned_cols=40 Identities=23% Similarity=0.274 Sum_probs=31.0
Q ss_pred HHHHHHHhHHHHhcCCcccchhHHHHHHhccH-HHHhhhcC
Q psy17765 180 AEVLELAGNAARDNKKTRIIPRHLQLAIRNDE-ELNKLLSG 219 (475)
Q Consensus 180 aEILELAgn~A~~~k~~rItP~hI~lAI~nD~-EL~~Lf~~ 219 (475)
..+++.|...++..+...|+++||-+|+-.|+ ....++..
T Consensus 85 ~~vl~~A~~~a~~~~d~~I~~ehlLlall~~~~~~~~~L~~ 125 (139)
T d1khya_ 85 VRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKA 125 (139)
T ss_dssp HHHHHHHHHHHHHHTCSSBCHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeecHHHHHHHHHcCCcHHHHHHHH
Confidence 45666788888888999999999999997654 45566653
No 57
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=35.06 E-value=12 Score=31.68 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=25.2
Q ss_pred HHHHHHhHHHHhcCCcccchhHHHHHHhcc
Q psy17765 181 EVLELAGNAARDNKKTRIIPRHLQLAIRND 210 (475)
Q Consensus 181 EILELAgn~A~~~k~~rItP~hI~lAI~nD 210 (475)
++|..|...|...+...|+++|++.|+..|
T Consensus 258 ~~l~~a~~~A~~~~~~~It~~~V~~A~~e~ 287 (287)
T d1w5sa2 258 VALKMACEMAEAMGRDSLSEDLVRKAVSEN 287 (287)
T ss_dssp HHHHHHHHHHHHTTCSSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHhcC
Confidence 467778878878888999999999999764
No 58
>d1qvra1 a.174.1.1 (A:4-148) N-terminal domain of ClpB (heat shock protein F84.1) {Thermus thermophilus [TaxId: 274]}
Probab=33.46 E-value=15 Score=29.89 Aligned_cols=107 Identities=18% Similarity=0.113 Sum_probs=62.8
Q ss_pred HHHHHHHhhhhhcCCCCCCChHHHHHHHHHhCcHHHHHHHHHHhhhhhhhccccCCCCCCCCCCccCcCCCCCcccchhH
Q psy17765 70 ERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSKGKGGKAKTKSKTRSSRAGLQFPVGR 149 (475)
Q Consensus 70 erIa~EA~~L~~~~kr~TlT~rdIqtAVrllLPgeLaKhAvseG~kAV~ky~sSkg~~~k~~~~~~srSsRagL~FPVsR 149 (475)
..+..+|..++...+...+++..+-.|+-- -+..+....+ .+ +.+-+..
T Consensus 8 ~~~l~~A~~~A~~~~~~~i~~~HlL~all~-~~~~~~~~iL-------~~-----------------------~gvd~~~ 56 (145)
T d1qvra1 8 REALAQAQVLAQRMKHQAIDLPHLWAVLLK-DERSLAWRLL-------EK-----------------------AGADPKA 56 (145)
T ss_dssp HHHHHHHHHHHHHTTCSEECHHHHHHHHCC-SSSSHHHHHH-------HT-----------------------TSSCHHH
T ss_pred HHHHHHHHHHHHHcCCCcccHHHHHHHHHc-CCcchHHHHH-------HH-----------------------cCCCHHH
Confidence 455667888888889999999998665422 2333333322 21 1122233
Q ss_pred HHHHHhhcCc-ccccC-CChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHHHHHhccH
Q psy17765 150 IHRLLRKGNY-AERVG-AGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDE 211 (475)
Q Consensus 150 i~r~Lke~~~-~~RI~-~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~lAI~nD~ 211 (475)
+.+.+...-- ..++. ....+|++.- +.+||+.|..+|+..+..-|+++||-+|+..|.
T Consensus 57 l~~~l~~~l~~~p~~~~~~~~~~~s~~----l~~il~~A~~~a~~~gd~~Is~ehLllal~~~~ 116 (145)
T d1qvra1 57 LKELQERELARLPKVEGAEVGQYLTSR----LSGALNRAEGLMEELKDRYVAVDTLVLALAEAT 116 (145)
T ss_dssp HHHHHHHHHHTSCCCCGGGTTCEECHH----HHHHHHHHHHHHHTTTCSSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcccccCCCcccCCCCHH----HHHHHHHHHHHHHHcCCccccHHHHHHHHHhcc
Confidence 3333322100 01221 1222333332 356788899999999999999999999998774
No 59
>d2v7fa1 a.4.5.84 (A:2-150) Ribosomal protein S19e {Pyrococcus abyssi [TaxId: 29292]}
Probab=28.43 E-value=17 Score=30.85 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=36.8
Q ss_pred eehhhhhccc--------cCCC--CCchHHHHHHhhHHHHHHhHhHHhhhccccc
Q psy17765 392 IYIYKVLKQV--------HPDT--GVSSKAMSIMNSFVNDIFERIAAESSRLAHY 436 (475)
Q Consensus 392 ~Yi~kvLkqv--------hp~~--giS~kam~imnsfv~Diferia~Eas~L~~~ 436 (475)
.=|.++|+|- +|+- -||++.++.||.+-.+|++.++.+.=.|++|
T Consensus 95 ~iiR~~LQqLE~~glVek~~~~GR~lT~~G~~~LD~iA~~v~~~~~~~~P~L~kY 149 (149)
T d2v7fa1 95 SIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEEIIPELKKY 149 (149)
T ss_dssp HHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHhCCCeeEcCCCCcEECHHHHHHHHHHHHHHHHHHHHhCcccccC
Confidence 4456666653 6664 5999999999999999999999998888876
No 60
>d1wwia1 a.22.1.4 (A:1-148) Hypothetical protein TTHA1479 {Thermus thermophilus [TaxId: 274]}
Probab=25.12 E-value=53 Score=27.57 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred ccchhHHHHHHhhcCcccccCCChhHHHHHHHHHHHHHHHHHHhHHHHhcCCcccchhHHH
Q psy17765 144 QFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQ 204 (475)
Q Consensus 144 ~FPVsRi~r~Lke~~~~~RI~~~A~VYLaAVLEYLtaEILELAgn~A~~~k~~rItP~hI~ 204 (475)
..|++++++++|+. -.--|..+-.-=+..+.|-=..++|..|-..|+.+++.-|.|+||-
T Consensus 2 ~m~~~k~e~~FR~a-a~LdvdK~d~~r~~d~V~~Kl~DLllva~~~A~~n~RdvI~~~DLP 61 (148)
T d1wwia1 2 LMKVAEFERLFRQA-AGLDVDKNDLKRVSDFLRNKLYDLLAVAERNAKYNGRDLIFEPDLP 61 (148)
T ss_dssp CSCHHHHHHHHHHH-HCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECGGGSC
T ss_pred CCcHHHHHHHHHHH-hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccCC
Confidence 46899999999874 3345677777778888899999999999889999999999999975
No 61
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=24.26 E-value=29 Score=28.89 Aligned_cols=29 Identities=21% Similarity=0.374 Sum_probs=24.3
Q ss_pred HHHHHHHhHHHHhcCCcccchhHHHHHHh
Q psy17765 180 AEVLELAGNAARDNKKTRIIPRHLQLAIR 208 (475)
Q Consensus 180 aEILELAgn~A~~~k~~rItP~hI~lAI~ 208 (475)
-++++.|...|...+...|+++||+.|..
T Consensus 243 ~~ll~~a~~~A~~~~~~~I~~edv~~A~~ 271 (276)
T d1fnna2 243 IDILYRSAYAAQQNGRKHIAPEDVRKSSK 271 (276)
T ss_dssp HHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcCHHHHHHHHH
Confidence 35677888888888889999999999875
No 62
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.58 E-value=19 Score=30.04 Aligned_cols=23 Identities=30% Similarity=0.547 Sum_probs=20.7
Q ss_pred cccCCCCCchHHHHHHhhHHHHH
Q psy17765 400 QVHPDTGVSSKAMSIMNSFVNDI 422 (475)
Q Consensus 400 qvhp~~giS~kam~imnsfv~Di 422 (475)
|-||+..-|...+.|+..||+.|
T Consensus 173 QFHPE~~~s~~G~~il~nFl~~i 195 (195)
T d1qdlb_ 173 QFHPESVGTSLGYKILYNFLNRV 195 (195)
T ss_dssp SSBTTSTTCTTHHHHHHHHHHHC
T ss_pred EcCCCCCCCcchHHHHHHHHhhC
Confidence 88999888889999999999864
No 63
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=20.02 E-value=18 Score=30.42 Aligned_cols=23 Identities=35% Similarity=0.707 Sum_probs=20.7
Q ss_pred cccCCCCCchHHHHHHhhHHHHH
Q psy17765 400 QVHPDTGVSSKAMSIMNSFVNDI 422 (475)
Q Consensus 400 qvhp~~giS~kam~imnsfv~Di 422 (475)
|-||+...|..+..|++.|+++|
T Consensus 177 QFHPE~s~s~~G~~il~nFl~~i 199 (205)
T d1gpma2 177 QFHPEVTHTRQGMRMLERFVRDI 199 (205)
T ss_dssp SBCTTSTTSTTHHHHHHHHHHTT
T ss_pred EeecccCCCccHHHHHHHHHHHH
Confidence 88999888888999999999876
Done!