BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17767
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NWK2|AP2MA_DANRE AP-2 complex subunit mu-A OS=Danio rerio GN=ap2m1a PE=2 SV=1
Length = 436
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 359 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 405
>sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q5NVF7|AP2M1_PONAB AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|P84091|AP2M1_MOUSE AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q96CW1|AP2M1_HUMAN AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=1 SV=1
Length = 435
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 358 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 404
>sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1
Length = 433
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 356 MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 402
>sp|Q7ZW98|AP2MB_DANRE AP-2 complex subunit mu-B OS=Danio rerio GN=ap2m1b PE=2 SV=1
Length = 436
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 1 MAGMKETQLSAEIELLETDTKKKWTRPPISMNFEVPFAPSGFKVSHL 47
M GMKE+Q+SAEIELL T+ KKKW RPPISMNFEVPFAPSG KV +L
Sbjct: 359 MVGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYL 405
>sp|P35603|AP2M_CAEEL AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2
SV=2
Length = 441
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Query: 1 MAGMKETQLSAEIELLETDT--KKKWTRPPISMNFEVPFAPSGFKVSHL 47
MAGMKE+Q+SAEI+LL T KKKW RPP+SMNFEVPFAPSG KV +L
Sbjct: 362 MAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYL 410
>sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2
SV=2
Length = 439
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 3 GMKETQLSAEIELLETDT--KKKWTRPPISMNFEVP-FAPSGFKVSHL 47
G E L AE+EL+ + KK W+RPPISM F+V F SGF V L
Sbjct: 365 GDTEFTLRAEVELMASVNLDKKAWSRPPISMEFQVTMFTASGFSVRFL 412
>sp|Q09718|AP2M_SCHPO AP-2 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=apm4 PE=1 SV=1
Length = 446
Score = 36.6 bits (83), Expect = 0.041, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEV-PFAPSGFKVSHL 47
G E AE+EL T ++ W +PPIS++F + F SG V +L
Sbjct: 372 GETELIFYAEVELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYL 417
>sp|Q99186|AP2M_YEAST AP-2 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APM4 PE=1 SV=1
Length = 491
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 3 GMKETQLSAEIELLETDTKK----KWTRPPISMNFEV-PFAPSGFKVSHLS 48
G+ E LSA + + +DT + +WTRPPIS+ FEV F+ SG V + +
Sbjct: 415 GLTENTLSA-VTVSTSDTTQLNLQQWTRPPISLEFEVMMFSNSGLVVRYFT 464
>sp|P35585|AP1M1_MOUSE AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3
Length = 423
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE + A L + + K +PPIS+ FE+P F SG +V +L I
Sbjct: 350 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKII 398
>sp|Q32Q06|AP1M1_RAT AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3
Length = 423
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE + A L + + K +PPIS+ FE+P F SG +V +L I
Sbjct: 350 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKII 398
>sp|Q9BXS5|AP1M1_HUMAN AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3
Length = 423
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE + A L + + K +PPIS+ FE+P F SG +V +L I
Sbjct: 350 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKII 398
>sp|Q2KJ81|AP1M1_BOVIN AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3
Length = 423
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE + A L + + K +PPIS+ FE+P F SG +V +L I
Sbjct: 350 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKII 398
>sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101
PE=2 SV=2
Length = 422
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE L+A + L +++ RPPI + FE+P F SG +V +L I
Sbjct: 349 GGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKII 397
>sp|Q9WVP1|AP1M2_MOUSE AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3
Length = 423
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 3 GMKETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVSHLSEI 50
G KE + A L +T++ RPPI + FE+P F SG +V ++ I
Sbjct: 350 GGKEYLMRAHFGLPSVETEEVEGRPPIGVKFEIPYFTVSGIQVRYMKII 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,293,351
Number of Sequences: 539616
Number of extensions: 803026
Number of successful extensions: 942
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 24
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)