BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17775
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383856703|ref|XP_003703847.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Megachile rotundata]
Length = 421
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 131/270 (48%), Gaps = 68/270 (25%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----RPGPLLPEPPR-RLPTPSGPPSM 55
+ PTKLNVYKND+ESWDYT PTLG + + RP PLL EP P P G
Sbjct: 60 FAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGNGRPAPLLAEPRYGAAPQPYGSTPQ 119
Query: 56 PNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSG------------------ 97
+ G D Y F +Y P ++++ G SG
Sbjct: 120 VTFPPGAGHDRY---EENFNGPATYAEPYVERY-GIKSDFSGREPLHPTPPRPNYVPTLG 175
Query: 98 --PPSGPEGCCM---------------------------------------VQMGDTLSA 116
PPS +G M +QMGD+++
Sbjct: 176 QTPPSSTQGSVMMVYGLQPDKVNTDKLFNLFCLYGNVTKVKFLKTKEGCAMIQMGDSIAV 235
Query: 117 ERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKM 176
ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKDFTGS+ NRF+NP M
Sbjct: 236 ERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKDFTGSKNNRFLNPAM 295
Query: 177 AMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
A KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 296 ANKNRIQPPSKIVHFFNTPPDLTEETVHRV 325
>gi|328792476|ref|XP_003251730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Apis
mellifera]
Length = 394
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 131/270 (48%), Gaps = 68/270 (25%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----RPGPLLPEPPR-RLPTPSGPPSM 55
+ PTKLNVYKND+ESWDYT PTLG + + RP PLL EP P P G
Sbjct: 33 FAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGNGRPAPLLAEPRYGAAPQPYGSTPQ 92
Query: 56 PNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSG------------------ 97
+ G D Y F +Y P ++++ G SG
Sbjct: 93 VTFPPGAGHDRY---EENFNGPATYAEPYVERY-GIKSDFSGREPLHPTPPRPGYVPTLG 148
Query: 98 --PPSGPEGCCM---------------------------------------VQMGDTLSA 116
PPS +G M +QMGD+++
Sbjct: 149 QTPPSSTQGSVMMVYGLQPDKVNTDKLFNLFCLYGNVTKVKFLKTKEGCAMIQMGDSIAV 208
Query: 117 ERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKM 176
ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKDFTGS+ NRF+NP M
Sbjct: 209 ERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKDFTGSKNNRFLNPAM 268
Query: 177 AMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
A KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 269 ANKNRIQPPSKIVHFFNTPPDLTEETVHRV 298
>gi|340708741|ref|XP_003392980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
terrestris]
Length = 479
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 130/270 (48%), Gaps = 68/270 (25%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----RPGPLLPEPPR-RLPTPSGPPSM 55
+ PTKLNVYKND+ESWDYT PTLG + + RP PLL EP P P G
Sbjct: 118 FAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGNGRPAPLLAEPRYGAAPQPYGSTPQ 177
Query: 56 PNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSG------------------ 97
+ G D Y F +Y P ++++ G SG
Sbjct: 178 VTFPPGAGHDRY---EENFNGPATYPEPYVERY-GIKSDFSGREPIHPTPPRPGYVPTLG 233
Query: 98 --PPSGPEGCCM---------------------------------------VQMGDTLSA 116
PPS +G M +QMGD ++
Sbjct: 234 QTPPSSTQGSVMMVYGLQPDKVNTDKLFNLFCLYGNVTKVKFLKTKEGCAMIQMGDNIAV 293
Query: 117 ERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKM 176
ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKDFTGS+ NRF+NP M
Sbjct: 294 ERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKDFTGSKNNRFLNPAM 353
Query: 177 AMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
A KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 354 ANKNRIQPPSKIVHFFNTPPDLTEETVHRV 383
>gi|350413134|ref|XP_003489890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
impatiens]
Length = 479
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 130/270 (48%), Gaps = 68/270 (25%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----RPGPLLPEPPR-RLPTPSGPPSM 55
+ PTKLNVYKND+ESWDYT PTLG + + RP PLL EP P P G
Sbjct: 118 FAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGNGRPAPLLAEPRYGAAPQPYGSTPQ 177
Query: 56 PNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSG------------------ 97
+ G D Y F +Y P ++++ G SG
Sbjct: 178 VTFPPGAGHDRY---EENFNGPATYPEPYVERY-GIKSDFSGREPLHPTPPRPGYVPTLG 233
Query: 98 --PPSGPEGCCM---------------------------------------VQMGDTLSA 116
PPS +G M +QMGD ++
Sbjct: 234 QTPPSSTQGSVMMVYGLQPDKVNTDKLFNLFCLYGNVTKVKFLKTKEGCAMIQMGDNIAV 293
Query: 117 ERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKM 176
ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKDFTGS+ NRF+NP M
Sbjct: 294 ERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKDFTGSKNNRFLNPAM 353
Query: 177 AMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
A KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 354 ANKNRIQPPSKIVHFFNTPPDLTEETVHRV 383
>gi|328724092|ref|XP_001949062.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Acyrthosiphon pisum]
Length = 428
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 126/230 (54%), Gaps = 39/230 (16%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY--- 58
+ P+KLNVYKNDSE+WDYT P G K PLLP+PPR P S P+ P +
Sbjct: 129 AKPSKLNVYKNDSETWDYTTPNPGEKK------TAPLLPDPPRA-PLISTRPTFPRFDFE 181
Query: 59 -RGGY-------PDDDY---------------YGAPP-AFEFERSYNSPVLDKFIGKPRG 94
RGG P+++Y YG P R +N L + K +
Sbjct: 182 CRGGLLSTPHDLPNNNYGDSYPATPGRCVLMVYGLDPDKANCNRLFNLFCLYGNVVKIKF 241
Query: 95 MSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP 154
+ EGC MVQM + +S +R M NL+K L +G L + SKQ++LSD+ PY+LP
Sbjct: 242 LKSK----EGCAMVQMDNEMSVDRCMDNLNKLTLISGNVLQLQVSKQMYLSDIMVPYDLP 297
Query: 155 DGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
DG+ SFKD++ S+ NR+ + KNR Q PS +LHFFNAPP+I+E L+
Sbjct: 298 DGTPSFKDYSNSKNNRYHSNSNG-KNRRQTPSSVLHFFNAPPNISEADLS 346
>gi|307214686|gb|EFN89615.1| Heterogeneous nuclear ribonucleoprotein L [Harpegnathos saltator]
Length = 235
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 81/104 (77%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EGC M+QMGD+++ ER + NL+ + RL +A+SKQ FLSDV++PY LPD + SFKD
Sbjct: 36 EGCAMIQMGDSIAVERCLQNLNNVTIGTDGRLQLAFSKQAFLSDVTNPYILPDKTASFKD 95
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
FTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 96 FTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVNRV 139
>gi|322792288|gb|EFZ16272.1| hypothetical protein SINV_02525 [Solenopsis invicta]
Length = 354
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 37 PLLPEPPRRLPTPSGPPSMPNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMS 96
PL P PPR P+ + P+ G Y P ++ +N L + K + +
Sbjct: 62 PLHPTPPRPGYVPTLGQTPPSSTQGSVMMVYGLQPDKVNTDKLFNLFCLYGNVTKVKFLK 121
Query: 97 GPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDG 156
EGC M+QMGD+++ ER + NL+ + RL + +SKQ FLSDV++PY LPD
Sbjct: 122 TK----EGCAMIQMGDSIAVERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDK 177
Query: 157 SESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ SFKDFTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 178 TASFKDFTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVNRV 227
>gi|380022117|ref|XP_003694900.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Apis florea]
Length = 337
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 80/104 (76%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EGC M+QMGD+++ ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKD
Sbjct: 138 EGCAMIQMGDSIAVERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKD 197
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
FTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 198 FTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVHRV 241
>gi|307166549|gb|EFN60616.1| Heterogeneous nuclear ribonucleoprotein L [Camponotus floridanus]
Length = 274
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 80/104 (76%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EGC M+QMGD+++ ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKD
Sbjct: 36 EGCAMIQMGDSIAVERCLQNLNNVTIGTDGRLQLGFSKQAFLSDVTNPYILPDKTASFKD 95
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
FTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 96 FTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVNRV 139
>gi|332023719|gb|EGI63943.1| Heterogeneous nuclear ribonucleoprotein L [Acromyrmex echinatior]
Length = 363
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 80/104 (76%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EGC M+QMGD+++ ER + NL+ + RL + +SKQ FLSDV++PY LPD + SFKD
Sbjct: 164 EGCAMIQMGDSIAVERCLQNLNNVTIGPDGRLQLGFSKQAFLSDVTNPYILPDKTASFKD 223
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
FTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 224 FTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVNRV 267
>gi|345494580|ref|XP_001604099.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Nasonia
vitripennis]
Length = 520
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 79/104 (75%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EGC M+QMGD ++ ER + NL+ + +L + +SKQ FLSDV++PY LPD + SFKD
Sbjct: 320 EGCAMIQMGDGIAVERCLQNLNNVTIGQDGKLQLGFSKQAFLSDVTNPYVLPDKTPSFKD 379
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
FTGS+ NRF+NP MA KNRIQPPS+++HFFN PPD+TEE + +
Sbjct: 380 FTGSKNNRFLNPAMANKNRIQPPSKIVHFFNTPPDLTEETVNRV 423
>gi|195431604|ref|XP_002063826.1| GK15699 [Drosophila willistoni]
gi|194159911|gb|EDW74812.1| GK15699 [Drosophila willistoni]
Length = 478
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 119/241 (49%), Gaps = 41/241 (17%)
Query: 2 SAPTKLNVYKND-SESWDYT----------------------QPTLGRTKDGPPSRPGPL 38
+ P KLNVYKN+ SWDYT PT G P L
Sbjct: 159 AKPEKLNVYKNEPDTSWDYTLSTEPPLLGPGTAFPPFGAPEYHPTTPENWKGAAIHPTGL 218
Query: 39 LPEPPRRLPTPSGPPSMP---NYRGGYP-----DDDYYGAPPAFEFERSYNSPVLDKFIG 90
+ EP +P + P + +GG D D F Y + KF+
Sbjct: 219 MKEPTGVVPGRNAPVAFTPQGQAQGGVMMVYGLDHDTSNTDKLFNLVCLYGNVARIKFL- 277
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +P
Sbjct: 278 ---------KTKEGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINP 328
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
+ LPD + SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I
Sbjct: 329 FLLPDHTPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIK 388
Query: 211 D 211
D
Sbjct: 389 D 389
>gi|443732513|gb|ELU17197.1| hypothetical protein CAPTEDRAFT_161728, partial [Capitella teleta]
Length = 546
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 129/279 (46%), Gaps = 80/279 (28%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTK----------------------DGPPSRPGPLL 39
+ PT+LNV +NDSE WDYT P+ ++ DGP SRP L
Sbjct: 203 AKPTRLNVSRNDSEMWDYTTPSGPKSDFNSKSAPLLAEPRYGSAPMPFGDGPRSRPA-LQ 261
Query: 40 PEPPR------------------RLPTPSGPPSMPNYRGGYP---DDDYYGAPPA----- 73
P PP+ R PPS ++ GG P + D YG PP+
Sbjct: 262 PAPPQSSMDYGQSDSYDSYSRNDRYQEQYSPPSRHDHYGGGPPMRNHDPYGPPPSNFSDG 321
Query: 74 --------------------------FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCM 107
+R +N L + + + + EG M
Sbjct: 322 GSQAGGPPGLYQQGSVLMVYGLDADKMNCQRVFNLFCLYGNVVRIKFLKSK----EGTAM 377
Query: 108 VQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSR 167
VQ+GD S ERA+ NLS GK+L +A+SKQV+L DV +P+EL D S SF DF GSR
Sbjct: 378 VQLGDPASCERAIKNLSNCFFF-GKKLQLAFSKQVYLQDVHNPHELIDCSPSFVDFMGSR 436
Query: 168 KNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF NP A KNRI PP + LH+FNAP ++TEEQ+ +
Sbjct: 437 NNRFTNPDAASKNRINPPYKCLHYFNAPANLTEEQINQL 475
>gi|17136488|ref|NP_476731.1| smooth, isoform A [Drosophila melanogaster]
gi|78707266|ref|NP_001027440.1| smooth, isoform E [Drosophila melanogaster]
gi|1321808|emb|CAA66282.1| smooth [Drosophila melanogaster]
gi|7302450|gb|AAF57535.1| smooth, isoform A [Drosophila melanogaster]
gi|71911687|gb|AAZ52802.1| smooth, isoform E [Drosophila melanogaster]
Length = 475
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 116/241 (48%), Gaps = 41/241 (17%)
Query: 2 SAPTKLNVYKND-SESWDYTQ----PTLG------------------RTKDGPPSRPGPL 38
+ P KLNVYKN+ SWDYT P LG G P L
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLSTEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGL 215
Query: 39 LPEPPRRLP--------TPSGPPSMPNYRGGYPDDDYYGAPPAFEFERSYNSPVLDKFIG 90
+ EP +P TP G D D F Y + KF+
Sbjct: 216 MKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARIKFL- 274
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P
Sbjct: 275 ---------KTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINP 325
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I
Sbjct: 326 FLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIK 385
Query: 211 D 211
D
Sbjct: 386 D 386
>gi|195056920|ref|XP_001995181.1| GH22768 [Drosophila grimshawi]
gi|193899387|gb|EDV98253.1| GH22768 [Drosophila grimshawi]
Length = 482
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 1 MSAPTKLNVYKNDSE-SWDYT----------------------QPTLGRTKDGPPSRPGP 37
+ P KLNVYKN+S+ SWDYT PT G P
Sbjct: 162 FAKPEKLNVYKNESDTSWDYTLSTEPPLLGPGTAFPPFGAPEYHPTQPDNWKGAAIHPTG 221
Query: 38 LLPEPPRRLPTPSGPPSMPNY---RGGYP-----DDDYYGAPPAFEFERSYNSPVLDKFI 89
L+ EP + + P + +G D D F Y + KF+
Sbjct: 222 LMKEPTGVVAGRNAPVAFAQQGQAQGAVMMVYGMDHDTSNTDKLFNLVCLYGNVARIKFL 281
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +
Sbjct: 282 ----------KTKEGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVIN 331
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
P+ LPD + SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I
Sbjct: 332 PFLLPDHTPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGI 388
>gi|281363805|ref|NP_001027439.2| smooth, isoform H [Drosophila melanogaster]
gi|40882465|gb|AAR96144.1| RE74969p [Drosophila melanogaster]
gi|272432576|gb|AAZ52803.2| smooth, isoform H [Drosophila melanogaster]
Length = 480
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 126/249 (50%), Gaps = 52/249 (20%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G +LP+PP P + PP P Y
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLST------------GEILPKPPLLGPGAAFPPFGAPEYH 203
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 204 TTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 262
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 263 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 322
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 323 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 382
Query: 203 LTDISGRTD 211
L I D
Sbjct: 383 LIGIFNIKD 391
>gi|386768315|ref|NP_725913.2| smooth, isoform P [Drosophila melanogaster]
gi|383302600|gb|AAM68420.2| smooth, isoform P [Drosophila melanogaster]
Length = 434
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 126/249 (50%), Gaps = 52/249 (20%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G +LP+PP P + PP P Y
Sbjct: 110 AKPEKLNVYKNEPDTSWDYTLST------------GEILPKPPLLGPGAAFPPFGAPEYH 157
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 158 TTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 216
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 217 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 276
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 277 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 336
Query: 203 LTDISGRTD 211
L I D
Sbjct: 337 LIGIFNIKD 345
>gi|195380768|ref|XP_002049133.1| GJ21415 [Drosophila virilis]
gi|194143930|gb|EDW60326.1| GJ21415 [Drosophila virilis]
Length = 480
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 1 MSAPTKLNVYKNDSE-SWDYT----------------------QPTLGRTKDGPPSRPGP 37
+ P KLNVYKN+++ SWDYT PT G P
Sbjct: 161 FAKPEKLNVYKNETDTSWDYTLSTEPPLLGPGTAFPPFGAPEYHPTQPDNWKGAAIHPTG 220
Query: 38 LLPEPPRRLPTPSGPPSMPNY---RGGYP-----DDDYYGAPPAFEFERSYNSPVLDKFI 89
L+ EP + + P + +G D D F Y + KF+
Sbjct: 221 LMKEPTGVVAGRNAPVAFAQQGQAQGAVMMVYGMDHDTSNTDKLFNLVCLYGNVARIKFL 280
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +
Sbjct: 281 ----------KTKEGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVIN 330
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
P+ LPD + SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I
Sbjct: 331 PFLLPDHTPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGI 387
>gi|195123985|ref|XP_002006482.1| GI18546 [Drosophila mojavensis]
gi|193911550|gb|EDW10417.1| GI18546 [Drosophila mojavensis]
Length = 481
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 1 MSAPTKLNVYKNDSE-SWDYT----------------------QPTLGRTKDGPPSRPGP 37
+ P KLNVYKN+++ SWDYT PT G P
Sbjct: 161 FAKPEKLNVYKNETDTSWDYTLSTEPPLLGPGTAFPPFGAPEYHPTQPDNWKGAAIHPTG 220
Query: 38 LLPEPPRRLPTPSGPPSMPNY---RGGYP-----DDDYYGAPPAFEFERSYNSPVLDKFI 89
L+ EP + + P + +G D D F Y + KF+
Sbjct: 221 LMKEPTGVVAGRNAPVAFAQQGQAQGAVMMVYGMDHDTSNTDKLFNLVCLYGNVARIKFL 280
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +
Sbjct: 281 ----------KTKEGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVIN 330
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
P+ LPD + SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I
Sbjct: 331 PFLLPDHTPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGI 387
>gi|386768309|ref|NP_001246425.1| smooth, isoform L [Drosophila melanogaster]
gi|383302597|gb|AFH08178.1| smooth, isoform L [Drosophila melanogaster]
Length = 492
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 126/249 (50%), Gaps = 40/249 (16%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T+ +G L EPP P + PP P Y
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLSTVKEIGNGRSPLLQEPLYEPPLLGPGAAFPPFGAPEYH 215
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 216 TTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 274
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 275 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 334
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 335 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 394
Query: 203 LTDISGRTD 211
L I D
Sbjct: 395 LIGIFNIKD 403
>gi|386768327|ref|NP_001246433.1| smooth, isoform Z [Drosophila melanogaster]
gi|383302606|gb|AFH08186.1| smooth, isoform Z [Drosophila melanogaster]
Length = 491
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 127/249 (51%), Gaps = 41/249 (16%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G++ P L +PP P + PP P Y
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLST-GKSLFSIPENVVMLESQPPLLGPGAAFPPFGAPEYH 214
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 215 TTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 273
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 274 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 333
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 334 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 393
Query: 203 LTDISGRTD 211
L I D
Sbjct: 394 LIGIFNIKD 402
>gi|198459570|ref|XP_001361426.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
gi|198136733|gb|EAL26004.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
Length = 369
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 128/249 (51%), Gaps = 41/249 (16%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G++ P L +PP P + PP P Y
Sbjct: 34 AKPEKLNVYKNEPDTSWDYTLST-GKSLFSIPENVVMLESQPPLLGPGAAFPPFGAPEYH 92
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
PD+ + GA P E + N+PV G+ +G G
Sbjct: 93 PTTPDN-WKGASIHPTGLMKEPTGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 151
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ
Sbjct: 152 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQN 211
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD + SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 212 FLSEVINPFLLPDHTPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 271
Query: 203 LTDISGRTD 211
L I D
Sbjct: 272 LIGIFNIKD 280
>gi|195487089|ref|XP_002091762.1| GE13838 [Drosophila yakuba]
gi|194177863|gb|EDW91474.1| GE13838 [Drosophila yakuba]
Length = 491
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 127/249 (51%), Gaps = 41/249 (16%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G++ P L +PP P + PP P Y
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLST-GKSLFSIPENVVMLESQPPLLGPGAAFPPFGAPEYH 214
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 215 PTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 273
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 274 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 333
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+Q
Sbjct: 334 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 393
Query: 203 LTDISGRTD 211
L I D
Sbjct: 394 LIGIFNIKD 402
>gi|432889398|ref|XP_004075257.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryzias latipes]
Length = 526
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 121/262 (46%), Gaps = 66/262 (25%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGR---TKDGPPSRPGPLLPEPPRRLPTPSGPPSM--- 55
+ PT+LNV+KND ++WDYT P LG DG S + P +R P P +
Sbjct: 204 AKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSSAEDMNANPNKR---PRQPALLGDH 260
Query: 56 -PNYRGGYPD-DDYYGAPP----------------------------------------- 72
P Y GGY D+ YG+PP
Sbjct: 261 PPEYGGGYHGYDENYGSPPYEGRRMGPTMRGRGGRSYGPNYGPPPPPPGEYGAHADSPVV 320
Query: 73 --------AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLS 124
+R +N L + + + M P G CMV+MGD + +RA+ +L+
Sbjct: 321 MVYGLDPVKMNADRVFNIFCLYGNVERVKFMKSKP----GACMVEMGDCYAVDRAITHLN 376
Query: 125 KTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQP 184
L G++L V SKQ + YEL DGS SFKDF GSR NRF +P+ A KNRIQ
Sbjct: 377 NNFLF-GQKLNVCVSKQQAIVP-GQSYELEDGSSSFKDFHGSRNNRFTSPEQAAKNRIQH 434
Query: 185 PSQLLHFFNAPPDITEEQLTDI 206
PS +LHFFNA PD+T E ++I
Sbjct: 435 PSNVLHFFNAQPDVTTEIFSEI 456
>gi|432889396|ref|XP_004075256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryzias latipes]
Length = 519
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 120/260 (46%), Gaps = 73/260 (28%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD---GPPSRPG--PLLPEPPRRLPTPSGPPSMP 56
+ PT+LNV+KND ++WDYT P LG +D P RP LL + P P
Sbjct: 204 AKPTRLNVFKNDQDTWDYTNPNLGGPEDMNANPNKRPRQPALLGDHP------------P 251
Query: 57 NYRGGYPD-DDYYGAPP------------------------------------------- 72
Y GGY D+ YG+PP
Sbjct: 252 EYGGGYHGYDENYGSPPYEGRRMGPTMRGRGGRSYGPNYGPPPPPPGEYGAHADSPVVMV 311
Query: 73 ------AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
+R +N L + + + M P G CMV+MGD + +RA+ +L+
Sbjct: 312 YGLDPVKMNADRVFNIFCLYGNVERVKFMKSKP----GACMVEMGDCYAVDRAITHLNNN 367
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
L G++L V SKQ + YEL DGS SFKDF GSR NRF +P+ A KNRIQ PS
Sbjct: 368 FLF-GQKLNVCVSKQQAIVP-GQSYELEDGSSSFKDFHGSRNNRFTSPEQAAKNRIQHPS 425
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNA PD+T E ++I
Sbjct: 426 NVLHFFNAQPDVTTEIFSEI 445
>gi|47087069|ref|NP_998548.1| heterogeneous nuclear ribonucleoprotein L2 [Danio rerio]
gi|32451940|gb|AAH54655.1| Heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|182891832|gb|AAI65353.1| Hnrnpl protein [Danio rerio]
Length = 481
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 113/209 (54%), Gaps = 11/209 (5%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGG 61
+ PT+LNV+KND ++WDYT P+LG T+ G P P RR+ P P P G
Sbjct: 208 AKPTRLNVFKNDQDTWDYTNPSLG-TQGGYPGYPDESYGYEGRRMGPPMSAPPPPGEYGA 266
Query: 62 YPDD---DYYGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAE 117
+ D YG P +R +N L + + + M P G MV+MGD + +
Sbjct: 267 HADSPVIMVYGLDPVKINADRVFNIFCLYGNVERMKFMKSKP----GAAMVEMGDCYAVD 322
Query: 118 RAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMA 177
RA+ +L+ L N ++L + SKQ + YEL DG+ SFKD+ GSR NRF P+ A
Sbjct: 323 RAISHLNNNFLFN-QKLNLCVSKQQAIMP-GQSYELDDGTNSFKDYHGSRNNRFATPEQA 380
Query: 178 MKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
KNRIQ PS +LHFFNA P+ T E T +
Sbjct: 381 AKNRIQHPSNVLHFFNAVPEATPEMFTRL 409
>gi|432889400|ref|XP_004075258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Oryzias latipes]
Length = 490
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 114/223 (51%), Gaps = 24/223 (10%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLG---------RTKDGPP---SRPGPLLPEPPRRLPTP 49
+ PT+LNV+KND ++WDYT P LG PP R GP + R P
Sbjct: 204 AKPTRLNVFKNDQDTWDYTNPNLGGPGGYHGYDENYGSPPYEGRRMGPTMRGRGGRSYGP 263
Query: 50 SGPPSMPNYRGGYPDDD-----YYGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPE 103
+ P P D YG P +R +N L + + + M P
Sbjct: 264 NYGPPPPPPGEYGAHADSPVVMVYGLDPVKMNADRVFNIFCLYGNVERVKFMKSKP---- 319
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G CMV+MGD + +RA+ +L+ L G++L V SKQ + YEL DGS SFKDF
Sbjct: 320 GACMVEMGDCYAVDRAITHLNNNFLF-GQKLNVCVSKQQAIVP-GQSYELEDGSSSFKDF 377
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
GSR NRF +P+ A KNRIQ PS +LHFFNA PD+T E ++I
Sbjct: 378 HGSRNNRFTSPEQAAKNRIQHPSNVLHFFNAQPDVTTEIFSEI 420
>gi|427796049|gb|JAA63476.1| Putative heteroproteinous nuclear ribonucleoprotein l, partial
[Rhipicephalus pulchellus]
Length = 523
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
+GC MVQMGD L+ ERA+G+L+ + K + + YSKQ FL+DV P+ELPDG+ SFKD
Sbjct: 352 DGCAMVQMGDPLAVERAVGHLNNAQFFDSK-MQLGYSKQAFLNDVQLPFELPDGTPSFKD 410
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F G+R NRF NP+ A KNRIQPPS++LHFFN P ITE+ L +
Sbjct: 411 FMGNRNNRFTNPEAASKNRIQPPSRVLHFFNTPFGITEDDLKKL 454
>gi|386768311|ref|NP_001246426.1| smooth, isoform M [Drosophila melanogaster]
gi|383302598|gb|AFH08179.1| smooth, isoform M [Drosophila melanogaster]
Length = 497
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 126/254 (49%), Gaps = 45/254 (17%)
Query: 2 SAPTKLNVYKND-SESWDYTQPT-----LGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-S 54
+ P KLNVYKN+ SWDYT T + +G L EPP P + PP
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYEPPLLGPGAAFPPFG 215
Query: 55 MPNYRGGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG----- 101
P Y P++ + GA P E + N+PV G+ +G G
Sbjct: 216 APEYHTTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDT 274
Query: 102 ------------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVA 137
EG MVQMGD ++ ER + +L+ + G ++ +A
Sbjct: 275 SNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIA 334
Query: 138 YSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPD 197
+SKQ FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP
Sbjct: 335 FSKQNFLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPG 394
Query: 198 ITEEQLTDISGRTD 211
+TE+QL I D
Sbjct: 395 LTEDQLIGIFNIKD 408
>gi|386768313|ref|NP_001246427.1| smooth, isoform O [Drosophila melanogaster]
gi|383302599|gb|AFH08180.1| smooth, isoform O [Drosophila melanogaster]
Length = 494
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 126/253 (49%), Gaps = 44/253 (17%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTL----GRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SM 55
+ P KLNVYKN+ SWDYT T ++ P L +PP P + PP
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLSTGEILPSKSLFSIPENVVMLESQPPLLGPGAAFPPFGA 215
Query: 56 PNYRGGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG------ 101
P Y P++ + GA P E + N+PV G+ +G G
Sbjct: 216 PEYHTTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTS 274
Query: 102 -----------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAY 138
EG MVQMGD ++ ER + +L+ + G ++ +A+
Sbjct: 275 NTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAF 334
Query: 139 SKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDI 198
SKQ FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNRIQPPS++LHFFN PP +
Sbjct: 335 SKQNFLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGL 394
Query: 199 TEEQLTDISGRTD 211
TE+QL I D
Sbjct: 395 TEDQLIGIFNIKD 407
>gi|405962643|gb|EKC28300.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 551
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG M+QMGD+L+ ER++ NLS L G +L +A SKQ FL DV +PYELPDG+ SFKD
Sbjct: 379 EGSAMIQMGDSLAVERSIQNLSHVTLF-GSKLTLAVSKQAFLQDVPNPYELPDGTPSFKD 437
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F GSR NR+ NP+ A KNRI P+++LH+FN PP+++E+ L ++
Sbjct: 438 FMGSRNNRYANPEQASKNRIMAPTKVLHYFNVPPELSEKVLEEV 481
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLP 47
KLNV+KND SWDYT P L + P R PLLPEP P
Sbjct: 199 KLNVFKNDQSSWDYTNPNL--NSEAAPPRNMPLLPEPSGGFP 238
>gi|194755565|ref|XP_001960054.1| GF13176 [Drosophila ananassae]
gi|190621352|gb|EDV36876.1| GF13176 [Drosophila ananassae]
Length = 421
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 80/109 (73%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 224 EGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 283
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 284 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 332
>gi|386768329|ref|NP_001246434.1| smooth, isoform AA [Drosophila melanogaster]
gi|383302607|gb|AFH08187.1| smooth, isoform AA [Drosophila melanogaster]
Length = 508
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 128/270 (47%), Gaps = 61/270 (22%)
Query: 2 SAPTKLNVYKND-SESWDYT---------------------QPTLGRTKDGPPSRPGPLL 39
+ P KLNVYKN+ SWDYT +P G++ P L
Sbjct: 151 AKPEKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYGKSLFSIPENVVMLE 210
Query: 40 PEPPRRLPTPSGPP-SMPNYRGGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIG 90
+PP P + PP P Y P++ + GA P E + N+PV G
Sbjct: 211 SQPPLLGPGAAFPPFGAPEYHTTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQG 269
Query: 91 KPRGMSGPPSG-----------------------------PEGCCMVQMGDTLSAERAMG 121
+ +G G EG MVQMGD ++ ER +
Sbjct: 270 QAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQ 329
Query: 122 NLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNR 181
+L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK++TGS+ NRF++P A KNR
Sbjct: 330 HLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNR 389
Query: 182 IQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
IQPPS++LHFFN PP +TE+QL I D
Sbjct: 390 IQPPSKILHFFNTPPGLTEDQLIGIFNIKD 419
>gi|386768307|ref|NP_001246424.1| smooth, isoform J [Drosophila melanogaster]
gi|294610694|gb|ADF27164.1| MIP20740p [Drosophila melanogaster]
gi|383302596|gb|AFH08177.1| smooth, isoform J [Drosophila melanogaster]
Length = 464
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 267 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 326
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 327 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 375
>gi|281363807|ref|NP_725915.2| smooth, isoform I [Drosophila melanogaster]
gi|25009665|gb|AAN71009.1| AT01055p [Drosophila melanogaster]
gi|272432577|gb|AAM68422.2| smooth, isoform I [Drosophila melanogaster]
Length = 420
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 223 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 282
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 283 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 331
>gi|194881391|ref|XP_001974831.1| GG20899 [Drosophila erecta]
gi|190658018|gb|EDV55231.1| GG20899 [Drosophila erecta]
Length = 423
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 80/109 (73%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + +G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 226 EGTAMVQMGDAVAVERCVQHLNNIPVGSGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 285
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 286 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 334
>gi|24655867|ref|NP_725914.1| smooth, isoform B [Drosophila melanogaster]
gi|21626941|gb|AAM68421.1| smooth, isoform B [Drosophila melanogaster]
gi|257286259|gb|ACV53076.1| FI03683p [Drosophila melanogaster]
Length = 404
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 207 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 266
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 267 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 315
>gi|195335917|ref|XP_002034609.1| GM19822 [Drosophila sechellia]
gi|194126579|gb|EDW48622.1| GM19822 [Drosophila sechellia]
Length = 420
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 223 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 282
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 283 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 331
>gi|442624275|ref|NP_001261094.1| smooth, isoform AC [Drosophila melanogaster]
gi|440214534|gb|AGB93626.1| smooth, isoform AC [Drosophila melanogaster]
Length = 301
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 104 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 163
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 164 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 212
>gi|312376998|gb|EFR23934.1| hypothetical protein AND_11838 [Anopheles darlingi]
Length = 331
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + N ++ +A+SKQ FLS+V++PY LPD + SFK+
Sbjct: 129 EGTAMVQMGDAIAVERCVQHLNNIPIGNDGKIQIAFSKQNFLSEVTNPYTLPDHTPSFKE 188
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++ A KNRIQPPS++LHFFN PP +T+EQL G D
Sbjct: 189 YTGSKNNRFLSLTQASKNRIQPPSKILHFFNTPPGLTDEQLIQAFGMND 237
>gi|386768321|ref|NP_001246430.1| smooth, isoform V [Drosophila melanogaster]
gi|383302603|gb|AFH08183.1| smooth, isoform V [Drosophila melanogaster]
Length = 540
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 343 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 402
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 403 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 451
>gi|386768319|ref|NP_001246429.1| smooth, isoform U [Drosophila melanogaster]
gi|383302602|gb|AFH08182.1| smooth, isoform U [Drosophila melanogaster]
Length = 515
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 318 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 377
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 378 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 426
>gi|386768317|ref|NP_001246428.1| smooth, isoform T [Drosophila melanogaster]
gi|383302601|gb|AFH08181.1| smooth, isoform T [Drosophila melanogaster]
Length = 552
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 355 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 414
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 415 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 463
>gi|386768305|ref|NP_001246423.1| smooth, isoform K [Drosophila melanogaster]
gi|383302595|gb|AFH08176.1| smooth, isoform K [Drosophila melanogaster]
Length = 535
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 338 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 397
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 398 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 446
>gi|442624264|ref|NP_001261093.1| smooth, isoform AB [Drosophila melanogaster]
gi|440214533|gb|AGB93625.1| smooth, isoform AB [Drosophila melanogaster]
Length = 509
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 312 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 371
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 372 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 420
>gi|158300590|ref|XP_320470.4| AGAP012054-PA [Anopheles gambiae str. PEST]
gi|157013233|gb|EAA00310.4| AGAP012054-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + N ++ +A+SKQ FLS+V++PY LPD + SFK+
Sbjct: 112 EGTAMVQMGDAIAVERCVQHLNNIPIGNDGKIQIAFSKQNFLSEVTNPYTLPDHTPSFKE 171
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++ A KNRIQPPS++LHFFN PP +T+EQL G D
Sbjct: 172 YTGSKNNRFLSLTQASKNRIQPPSKILHFFNTPPGLTDEQLIAAFGSND 220
>gi|116007726|ref|NP_001036561.1| smooth, isoform G [Drosophila melanogaster]
gi|386768323|ref|NP_001246431.1| smooth, isoform W [Drosophila melanogaster]
gi|386768325|ref|NP_001246432.1| smooth, isoform Y [Drosophila melanogaster]
gi|113194667|gb|ABI31106.1| smooth, isoform G [Drosophila melanogaster]
gi|383302604|gb|AFH08184.1| smooth, isoform W [Drosophila melanogaster]
gi|383302605|gb|AFH08185.1| smooth, isoform Y [Drosophila melanogaster]
Length = 260
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 79/109 (72%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 63 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 122
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 123 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 171
>gi|195151594|ref|XP_002016724.1| GL11734 [Drosophila persimilis]
gi|194110571|gb|EDW32614.1| GL11734 [Drosophila persimilis]
Length = 325
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 80/109 (73%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD+++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD + SFK+
Sbjct: 130 EGTAMVQMGDSVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHTPSFKE 189
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+TGS+ NRF++P A KNRIQPPS++LHFFN PP +TE+QL I D
Sbjct: 190 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKD 238
>gi|321459460|gb|EFX70513.1| hypothetical protein DAPPUDRAFT_328086 [Daphnia pulex]
Length = 439
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 126/276 (45%), Gaps = 73/276 (26%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP----SMPN 57
+ PT+LNV+KNDSE+WDYT PT G D RP PLLPEP G P ++
Sbjct: 92 AKPTRLNVHKNDSETWDYTTPTPG--ADSQRQRPAPLLPEPAGGPQGFRGSPEYGRTVER 149
Query: 58 YRGGY-PDDDYYGAPPAFEFERSYNSPVL-----------------DKFIGK-------- 91
+ G+ GA P F++E S +F G+
Sbjct: 150 HENGFGVRQGRDGATPRFDYEESAGGAGGRFGGEPSRSIGGGRAPGQRFGGQSGGPPVQS 209
Query: 92 --PRGMSGPPSGP-EGCCMVQMG---DTLSAERAM------GNLSKTLLCNGK------- 132
RG+ GP EG ++ G + ++A+R GN+ K K
Sbjct: 210 RGSRGVVDATDGPQEGAVLMVYGLNMEKMNADRLFNLLCLYGNVFKIKFLKTKEGSAMVQ 269
Query: 133 ----------------------RLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNR 170
++ V YSKQ FL+DVS PY+LPDG+ SFK + S+ NR
Sbjct: 270 MGDAPSVDRAIFYLNGLDFFNTKMNVNYSKQAFLADVSMPYDLPDGTPSFKSYVNSKNNR 329
Query: 171 FMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F+N MA KNR+QPP ++LHF+N PP +TEE L +
Sbjct: 330 FLNSDMASKNRLQPPCKVLHFYNTPPGLTEEDLRKV 365
>gi|410910584|ref|XP_003968770.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Takifugu rubripes]
Length = 514
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 118/252 (46%), Gaps = 60/252 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGG 61
+ PT+LNV+KND E+WDYT P LG +D + P +R P G P Y GG
Sbjct: 204 AKPTRLNVFKNDQETWDYTNPNLGGPEDVNAN------PNKRQRQPALLGDHP-PEYGGG 256
Query: 62 YP--DDDY--------------------------------------------YGA-PPAF 74
Y D++Y YG P
Sbjct: 257 YHGYDENYGYEGRRMGPPMRGRGGRSYGPGYGPPPPPPGEYGSHAESPVVMLYGLDPQKM 316
Query: 75 EFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRL 134
+R +N L + + + M P G MV+MGD + +RA+ +L+ T L G+++
Sbjct: 317 NADRIFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYAVDRAITHLNNTYLF-GQKI 371
Query: 135 AVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNA 194
V SKQ + YEL DGS SFKDF GSR NRF +P+ A KNRIQ PS +LHFFNA
Sbjct: 372 NVCVSKQQAIVP-GQCYELEDGSSSFKDFHGSRNNRFASPEQAAKNRIQHPSNVLHFFNA 430
Query: 195 PPDITEEQLTDI 206
PD+T E + I
Sbjct: 431 QPDVTPELFSQI 442
>gi|410035018|ref|XP_003949838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Pan
troglodytes]
Length = 513
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY----- 58
PT+LNV +ND++SWDYT+P LGR GPLLP P R P + Y
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRR-----GSHGPLLPLPSRYRMGSRDTPELVAYPLPQA 293
Query: 59 -----RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQ 109
GG P + + R +N L I K + M P G +V+
Sbjct: 294 SSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIP----GTALVE 349
Query: 110 MGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKDFTGSRK 168
MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KDF S+
Sbjct: 350 MGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKDFAMSKN 406
Query: 169 NRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 407 NRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 444
>gi|343961675|dbj|BAK62427.1| heterogeneous nuclear ribonucleoprotein L-like protein [Pan
troglodytes]
Length = 513
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY----- 58
PT+LNV +ND++SWDYT+P LGR GPLLP P R P + Y
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRR-----GSHGPLLPLPSRYRMGSRDTPELVAYPLPQA 293
Query: 59 -----RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQ 109
GG P + + R +N L I K + M P G +V+
Sbjct: 294 SSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIP----GTALVE 349
Query: 110 MGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKDFTGSRK 168
MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KDF S+
Sbjct: 350 MGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKDFAMSKN 406
Query: 169 NRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 407 NRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 444
>gi|417401975|gb|JAA47851.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 502
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY----- 58
PT+LNV +ND++SWDYT+P LGR GPLLP P R P + Y
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRR-----GSHGPLLPLPSRYRMGSRDTPELVAYPLPQA 298
Query: 59 -----RGGYPDDDYYGA----PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQ 109
GG P P R +N L I K + M P G +V+
Sbjct: 299 SSSYMHGGNPSGSVVMVSGLHPLKMNCSRVFNLFCLYGNIEKVKFMKTIP----GTALVE 354
Query: 110 MGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKDFTGSRK 168
MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KDF S+
Sbjct: 355 MGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKDFAMSKN 411
Query: 169 NRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 412 NRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 449
>gi|402890610|ref|XP_003908576.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Papio anubis]
Length = 413
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY----- 58
PT+LNV +ND++SWDYT+P LGR GPLLP P R P + Y
Sbjct: 139 PTRLNVIRNDNDSWDYTKPYLGRR-----GSHGPLLPLPSRYRMGSRDTPELVAYPLPQA 193
Query: 59 -----RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQ 109
GG P + + R +N L I K + M P G +V+
Sbjct: 194 SSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIP----GTALVE 249
Query: 110 MGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKDFTGSRK 168
MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KDF S+
Sbjct: 250 MGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKDFAMSKN 306
Query: 169 NRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 307 NRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 345
>gi|431912753|gb|ELK14771.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Pteropus
alecto]
Length = 484
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 111/220 (50%), Gaps = 27/220 (12%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY--- 58
+ PT+LNV +ND++SWDYT+P LGR GPLLP P R P + Y
Sbjct: 208 AMPTRLNVIRNDNDSWDYTKPYLGRR-----GSHGPLLPLPSRYRMGSRDTPELVAYPLP 262
Query: 59 -------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKPRGMSGPPSGPEGCCM 107
GG P + + R +N L I K + M P G +
Sbjct: 263 QASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIP----GTAL 318
Query: 108 VQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKDFTGS 166
V+MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KDF S
Sbjct: 319 VEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKDFAMS 375
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 376 KNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 415
>gi|47224789|emb|CAG06359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 117/253 (46%), Gaps = 60/253 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGG 61
+ PT+LNV+KND E+WDYT P LG +D + P +R P G P Y GG
Sbjct: 207 AKPTRLNVFKNDQETWDYTNPNLGGPEDVNAN------PNKRQRQPALLGDHP-PEYGGG 259
Query: 62 YP--DDDY--------------------------------------------YGA-PPAF 74
Y D+ Y YG P
Sbjct: 260 YHGYDESYGYEGRRMGPPMRGRGGRSYGPGYGPPPPPPGEYGSHAESPVVMLYGLDPQKM 319
Query: 75 EFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRL 134
+R +N L + + + M P G MV+MGD + +RA+ +L+ T L G+++
Sbjct: 320 NADRIFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYAVDRAITHLNNTYLF-GQKI 374
Query: 135 AVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNA 194
V SKQ + YEL DGS SFKDF GSR NRF +P+ A KNRIQ PS +LHFFNA
Sbjct: 375 NVCVSKQQAIVP-GQCYELEDGSSSFKDFHGSRNNRFASPEQAAKNRIQHPSNVLHFFNA 433
Query: 195 PPDITEEQLTDIS 207
PD+T E + +
Sbjct: 434 QPDVTPELFSQVC 446
>gi|59323997|gb|AAW84264.1| heterogeneous nuclear ribonucleoprotein L, partial [Aplysia
californica]
Length = 237
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG M+Q+GD +S ERA+ NL+ G +L ++ SKQ FL +V +P+EL DG+ S+KD
Sbjct: 66 EGSAMIQLGDPISVERAIANLNNVFFF-GNKLQLSMSKQAFLQEVPNPHELADGTLSYKD 124
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F G+R NRF NP+ A KNRIQ PS++LHFFNAPP ITE ++ ++
Sbjct: 125 FMGNRNNRFTNPEAAQKNRIQSPSKVLHFFNAPPTITESEVFEM 168
>gi|432895625|ref|XP_004076081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 529
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 121/260 (46%), Gaps = 61/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLG-RTKDGPPSRPGPLLPE--PPRRLPTPS----GPPS 54
+ PT+LNV+KND ++WDYT P L + DG + P P +R P+ PP
Sbjct: 207 AKPTRLNVFKNDQDTWDYTNPNLSSQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPD 266
Query: 55 MPNYRGGYP--DDDYYGAPPAFEFERSY-------------------------NSPVL-- 85
+G Y +DD YG PP S +SPVL
Sbjct: 267 YGGPQGSYHAYNDDAYGPPPPHRLNSSMGGRGRGGQRYGAGYGPPPPDYGPHADSPVLMV 326
Query: 86 ----------DKF---------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
DK + + + M P G MV+MGD S +RA+ +L+
Sbjct: 327 YGLEPSKINADKVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYSVDRAITHLNNN 382
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
L G++L V SKQ + Y+L D + SFKDF GSR NRF +P+ A KNRIQ PS
Sbjct: 383 FLF-GQKLNVCVSKQQAIVP-GQSYQLEDNTSSFKDFHGSRNNRFTSPEQAAKNRIQHPS 440
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNA PDI+EE + I
Sbjct: 441 NVLHFFNAQPDISEETFSQI 460
>gi|348522987|ref|XP_003449005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 527
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 117/259 (45%), Gaps = 60/259 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGR---TKDGPPSRPGPLLPEPPRRLPTPSGPPSMP-N 57
+ PT+LNV+KND ++WDYT P LG DG S + P +R P+ P
Sbjct: 204 AKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSNADDVNANPNKRQRQPALLGDHPPE 263
Query: 58 YRGGYPD-DDYYGAPP-------------------------------------------- 72
Y GGY D+ YG+PP
Sbjct: 264 YGGGYHGYDESYGSPPYEGRRMGPPMRGRGGRSYGPGYGPPPPPPGEYGAHADSPVVMVY 323
Query: 73 -----AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTL 127
+R +N L + + + M P G MV+MGD + +RA+ +L+
Sbjct: 324 GLDPVKMNADRVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYAVDRAITHLNNNF 379
Query: 128 LCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQ 187
L G++L V SKQ + YEL DG+ SFK+F GSR NRF +P+ A KNRIQ PS
Sbjct: 380 LF-GQKLNVCVSKQQAIVP-GQCYELEDGTSSFKEFHGSRNNRFTSPEQAAKNRIQHPSN 437
Query: 188 LLHFFNAPPDITEEQLTDI 206
+LHFFNA P+ T E + I
Sbjct: 438 VLHFFNAQPEATPEIFSQI 456
>gi|149050610|gb|EDM02783.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 410
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 113/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR------------TKDGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR D P S GPLLP P R
Sbjct: 112 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 171
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 172 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 231
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 232 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 284
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 285 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 342
>gi|426226432|ref|XP_004007347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Ovis
aries]
Length = 507
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 209 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 268
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 269 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 328
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 329 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 381
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 382 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 439
>gi|354488933|ref|XP_003506620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 576
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------------DGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR D P S GPLLP P R
Sbjct: 278 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 337
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 338 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 397
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 398 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 450
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 451 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 507
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 346 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 405
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGA----PPAFEFERSYNSPVLDKFIG 90
P + Y GG P P R +N L I
Sbjct: 406 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHPLKMNCSRVFNLFCLYGNIE 465
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 466 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 518
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 519 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 575
>gi|417402541|gb|JAA48116.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 542
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGA----PPAFEFERSYNSPVLDKFIG 90
P + Y GG P P R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHPLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|149641747|ref|XP_001507993.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L, partial
[Ornithorhynchus anatinus]
Length = 360
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 62 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 121
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 122 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 181
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 182 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 234
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 235 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 292
>gi|37514843|gb|AAH12849.2| Hnrpll protein [Mus musculus]
Length = 594
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------------DGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR D P S GPLLP P R
Sbjct: 296 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 355
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 356 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 415
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 416 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 468
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 469 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 525
>gi|110347535|ref|NP_659051.3| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|62286942|sp|Q921F4.3|HNRLL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------------DGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR D P S GPLLP P R
Sbjct: 293 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 352
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 353 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 412
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 413 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 465
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 466 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 522
>gi|13435822|gb|AAH04763.1| Hnrpll protein, partial [Mus musculus]
Length = 340
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 42 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 101
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 102 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 161
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 162 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 214
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 215 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 271
>gi|355565619|gb|EHH22048.1| hypothetical protein EGK_05237 [Macaca mulatta]
Length = 542
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|293347913|ref|XP_001063027.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
gi|293359746|ref|XP_233805.5| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
Length = 591
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------------DGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR D P S GPLLP P R
Sbjct: 293 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 352
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 353 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 412
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 413 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 465
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 466 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 522
>gi|291386911|ref|XP_002709958.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryctolagus cuniculus]
Length = 541
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 243 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 302
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 303 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 362
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 363 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 415
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 416 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 472
>gi|395846042|ref|XP_003795724.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Otolemur
garnettii]
Length = 536
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 238 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 297
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 298 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 357
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 358 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 410
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 411 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 467
>gi|217416379|ref|NP_001136122.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo
sapiens]
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]
gi|67005958|gb|AAQ20084.2| stromal RNA regulating factor [Homo sapiens]
gi|383409737|gb|AFH28082.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|384950354|gb|AFI38782.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|410214348|gb|JAA04393.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289228|gb|JAA23214.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 537
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 298
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 299 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 358
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 359 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 411
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 412 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 468
>gi|351715514|gb|EHB18433.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Heterocephalus glaber]
Length = 479
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 181 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 240
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 241 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 300
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 301 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 353
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 354 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 411
>gi|410035016|ref|XP_001168474.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 4
[Pan troglodytes]
gi|426335280|ref|XP_004029156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gorilla
gorilla gorilla]
gi|119620773|gb|EAX00368.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_a [Homo
sapiens]
Length = 537
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 298
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 299 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 358
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 359 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 411
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 412 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 468
>gi|344288860|ref|XP_003416164.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Loxodonta
africana]
Length = 489
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 191 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 250
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 251 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 310
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 311 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 363
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 364 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 420
>gi|291386909|ref|XP_002709957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryctolagus cuniculus]
Length = 547
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 249 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 308
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 309 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 368
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 369 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 421
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 422 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 478
>gi|119620776|gb|EAX00371.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
gi|119620777|gb|EAX00372.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
Length = 542
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|332227246|ref|XP_003262804.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Nomascus leucogenys]
Length = 542
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|335775957|gb|AEH58745.1| heterogeneous nuclear ribonucleoprotein L-lik-like protein [Equus
caballus]
Length = 424
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 126 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 185
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 186 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 245
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 246 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 298
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 299 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 355
>gi|390474560|ref|XP_002757889.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Callithrix jacchus]
Length = 543
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 245 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 304
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 305 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 364
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 365 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 417
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 418 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 474
>gi|410955434|ref|XP_003984358.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Felis catus]
Length = 544
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 246 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 305
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 306 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 365
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 366 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 418
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 419 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 475
>gi|348574608|ref|XP_003473082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Cavia
porcellus]
Length = 541
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 243 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 302
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 303 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 362
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 363 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 415
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 416 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 472
>gi|116004021|ref|NP_001070368.1| heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|115305250|gb|AAI23452.1| Heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|296482596|tpg|DAA24711.1| TPA: heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
Length = 541
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 243 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 302
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 303 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 362
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 363 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 415
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 416 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 472
>gi|355694958|gb|AER99845.1| heteroproteinous nuclear ribonucleoprotein L-like protein [Mustela
putorius furo]
Length = 380
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 83 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 142
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 143 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 202
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 203 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 255
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 256 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 313
>gi|338714336|ref|XP_001918049.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Equus caballus]
Length = 543
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 245 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 304
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 305 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 364
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 365 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 417
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 418 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 474
>gi|67972328|dbj|BAE02506.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 139 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 198
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 199 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 258
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 259 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 311
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 312 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 368
>gi|440907649|gb|ELR57769.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Bos
grunniens mutus]
Length = 541
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 243 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 302
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 303 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 362
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 363 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 415
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 416 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 472
>gi|20149709|ref|NP_612403.2| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo
sapiens]
gi|62286941|sp|Q8WVV9.1|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like;
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating
factor
gi|17028350|gb|AAH17480.1| Heterogeneous nuclear ribonucleoprotein L-like [Homo sapiens]
gi|62988915|gb|AAY24302.1| unknown [Homo sapiens]
gi|158256360|dbj|BAF84151.1| unnamed protein product [Homo sapiens]
gi|380784945|gb|AFE64348.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|383409735|gb|AFH28081.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|410214350|gb|JAA04394.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410253266|gb|JAA14600.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289230|gb|JAA23215.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410329931|gb|JAA33912.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 542
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|359321615|ref|XP_003639639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
Length = 545
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 247 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 306
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 307 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 366
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 367 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 419
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 420 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 476
>gi|397493589|ref|XP_003817686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pan paniscus]
Length = 539
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 241 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 300
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 301 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 360
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 361 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQ 413
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 414 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 470
>gi|402890606|ref|XP_003908574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Papio anubis]
gi|119620774|gb|EAX00369.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b [Homo
sapiens]
Length = 437
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 139 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 198
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 199 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 258
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 259 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 311
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 312 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLC 369
>gi|74147193|dbj|BAE27500.1| unnamed protein product [Mus musculus]
Length = 670
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 111/236 (47%), Gaps = 39/236 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 372 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 431
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 432 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 491
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ + S
Sbjct: 492 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQHSVVP-SQI 545
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 546 FELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 601
>gi|158254346|gb|AAI54329.1| Hnrnpl protein [Danio rerio]
Length = 522
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 118/257 (45%), Gaps = 66/257 (25%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSG--PPSMPNYR 59
+ PT+LNV+KND ++WDYT P+LG T+D + P +R P G PP Y
Sbjct: 208 AKPTRLNVFKNDQDTWDYTNPSLG-TQDMNAN------PNKRQRQPALLGDHPPEYGGY- 259
Query: 60 GGYPDDDY-------------------------------------YGA------------ 70
GYPD+ Y YGA
Sbjct: 260 PGYPDESYGYEGRRMGPPMSAPRRGGASQRYSAQYGGPPPPPPGEYGAHADSPVIMVYGL 319
Query: 71 -PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLC 129
P +R +N L + + + M P G MV+MGD + +RA+ +L+ L
Sbjct: 320 DPVKINADRVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYAVDRAISHLNNNFLF 375
Query: 130 NGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLL 189
N ++L + SKQ + YEL DG+ SFKD+ GSR NRF P+ A KNRIQ PS +L
Sbjct: 376 N-QKLNLCVSKQQAIMP-GQSYELDDGTNSFKDYHGSRNNRFATPEQAAKNRIQHPSNVL 433
Query: 190 HFFNAPPDITEEQLTDI 206
HFFNA P+ T E T +
Sbjct: 434 HFFNAVPEATPEMFTRL 450
>gi|327262697|ref|XP_003216160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 551
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 109/236 (46%), Gaps = 39/236 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 253 PTRLNVTQNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGTHGPLLPLPSR 312
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGA----PPAFEFERSYNSPVLDKFIG 90
P + Y GG P P R +N L I
Sbjct: 313 YRMASRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHPQKMNCSRVFNLFCLYGNIE 372
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ + S
Sbjct: 373 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQHSVVP-SQI 426
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 427 FELEDGTSSYKDFVMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKL 482
>gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 111/236 (47%), Gaps = 39/236 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 290 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPLPSR 349
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 350 YRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 409
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ + S
Sbjct: 410 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQHSVVP-SQI 463
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 464 FELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 519
>gi|348522989|ref|XP_003449006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 492
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 114/233 (48%), Gaps = 44/233 (18%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG--PLLPEPP---RRLPTPSGPPSMP 56
+ PT+LNV+KND ++WDYT P LG GP G PP RR+ GPP
Sbjct: 204 AKPTRLNVFKNDQDTWDYTNPNLG----GPGGYHGYDESYGSPPYEGRRM----GPPMRG 255
Query: 57 NYRGGY----------------------PDDDYYGAPPA-FEFERSYNSPVLDKFIGKPR 93
RGG P YG P +R +N L + + +
Sbjct: 256 --RGGRSYGPGYGPPPPPPGEYGAHADSPVVMVYGLDPVKMNADRVFNIFCLYGNVERVK 313
Query: 94 GMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYEL 153
M P G MV+MGD + +RA+ +L+ L G++L V SKQ + YEL
Sbjct: 314 FMKSKP----GAAMVEMGDCYAVDRAITHLNNNFLF-GQKLNVCVSKQQAIVP-GQCYEL 367
Query: 154 PDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
DG+ SFK+F GSR NRF +P+ A KNRIQ PS +LHFFNA P+ T E + I
Sbjct: 368 EDGTSSFKEFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNAQPEATPEIFSQI 420
>gi|109102685|ref|XP_001109971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Macaca mulatta]
Length = 537
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 298
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 299 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 358
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL + SKQ S V S
Sbjct: 359 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLIFSVSKQ--HSVVPSQ 411
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 412 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 468
>gi|363731463|ref|XP_414998.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gallus
gallus]
Length = 514
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 111/238 (46%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 216 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 275
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 276 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 335
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 336 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 388
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 389 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKLC 446
>gi|157123790|ref|XP_001660296.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l) [Aedes aegypti]
gi|108874222|gb|EAT38447.1| AAEL009659-PA [Aedes aegypti]
Length = 551
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCN-GKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
EG MVQMGD ++ ER++ +L+ + N G ++ +A+SKQ +LS+ ++PY LPD S SFK
Sbjct: 324 EGTAMVQMGDAIAVERSIQHLNNIPIGNDGSKIQIAFSKQNYLSESTNPYTLPDNSISFK 383
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
D++ S+ NRF++ A KNRIQPPS++LHFFN PP ++E+QL +
Sbjct: 384 DYSASKNNRFLSLTQASKNRIQPPSKILHFFNTPPGMSEDQLLN 427
>gi|109102683|ref|XP_001109932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Macaca mulatta]
Length = 542
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 303
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 304 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 363
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL + SKQ S V S
Sbjct: 364 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLIFSVSKQ--HSVVPSQ 416
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 417 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 473
>gi|449274548|gb|EMC83649.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Columba livia]
Length = 471
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 111/238 (46%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 173 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 232
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 233 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 292
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 293 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 345
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 346 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKLC 403
>gi|326915072|ref|XP_003203845.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Meleagris gallopavo]
Length = 489
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 111/238 (46%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 191 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPNR 250
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 251 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 310
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 311 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 363
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 364 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKLC 421
>gi|224046933|ref|XP_002199365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Taeniopygia guttata]
Length = 546
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 110/236 (46%), Gaps = 39/236 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 248 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 307
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 308 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 367
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ + S
Sbjct: 368 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQHSVVP-SQI 421
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 422 FELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKL 477
>gi|387018124|gb|AFJ51180.1| Heterogeneous nuclear ribonucleoprotein L-like [Crotalus
adamanteus]
Length = 539
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 241 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 300
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFE----FERSYNSPVLDKFIG 90
P + Y GG P + R +N L I
Sbjct: 301 YRMASRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQQKMNCSRVFNLFCLYGNIE 360
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 361 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 413
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE +
Sbjct: 414 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFVKL 470
>gi|170068929|ref|XP_001869049.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864924|gb|EDS28307.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 268
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCN-GKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
EG MVQMGD ++ ER++ +L+ + N G ++ +A+SKQ +LS+ ++PY LPD S SFK
Sbjct: 108 EGTAMVQMGDAIAVERSIQHLNNIPIGNDGSKIQIAFSKQNYLSESTNPYTLPDNSISFK 167
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D++ S+ NRF++ A KNRIQPPS++LHFFN PP ++E+QL
Sbjct: 168 DYSASKNNRFLSLTQASKNRIQPPSKILHFFNTPPGMSEDQL 209
>gi|348524681|ref|XP_003449851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 529
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 117/260 (45%), Gaps = 61/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTL-GRTKDGPPSRPGPLLPE--PPRRLPTPS----GPPS 54
+ P +LNV+KND ++WDYT P L G+ DG + P P +R P+ PP
Sbjct: 207 AKPARLNVFKNDQDTWDYTNPNLSGQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPD 266
Query: 55 MPNYRGGYP--DDDYYGAPP---------------------------------------- 72
+GGY +DD YG PP
Sbjct: 267 YGGPQGGYHGYNDDSYGPPPPHRMGPGMGGRGRGNQRYGPGYGPPPPEYGPHADSPVLMV 326
Query: 73 ------AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
++ +N L + + + M P G MV+MGD S +RA+ +L+
Sbjct: 327 YGLEPSKINADKVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYSVDRAITHLNNN 382
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
L G++L V SKQ + Y+L D + SFKDF GSR NRF +P+ A KNRIQ PS
Sbjct: 383 FLF-GQKLNVCVSKQQAIVP-GQCYQLEDNTSSFKDFHGSRNNRFTSPEQAAKNRIQHPS 440
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNA PDI+ E +
Sbjct: 441 NVLHFFNAQPDISAEIFNQV 460
>gi|170040282|ref|XP_001847933.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863860|gb|EDS27243.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 347
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCN-GKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
EG MVQMGD ++ ER++ +L+ + N G ++ +A+SKQ +LS+ ++PY LPD S SFK
Sbjct: 117 EGTAMVQMGDAIAVERSIQHLNNIPIGNDGSKIQIAFSKQNYLSESTNPYTLPDNSISFK 176
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D++ S+ NRF++ A KNRIQPPS++LHFFN PP ++E+QL
Sbjct: 177 DYSASKNNRFLSLTQASKNRIQPPSKILHFFNTPPGMSEDQL 218
>gi|395508191|ref|XP_003758397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Sarcophilus harrisii]
Length = 500
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 202 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 261
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 262 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 321
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 322 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 374
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TE+ + +
Sbjct: 375 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEDTFSKLC 432
>gi|47208707|emb|CAF90432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPP-------------------- 43
PT+LNV KND+ESWDYT+P L R G + +L E P
Sbjct: 200 PTRLNVIKNDNESWDYTKPYLVRRDRGKGRQRQAILGEHPASYSENGYGPPCPLLPLPSN 259
Query: 44 -RRLPTPSGPPSMPNY----------RGGYPDDDYYGA---PPAFEFERSYNSPVLDKFI 89
R +P P M +Y G P + P R +N L I
Sbjct: 260 SRYKLSPLDVPDMVSYPLPQSSSYSYSGHTPSSVAMVSGLHPSKMNCTRIFNLFCLYGNI 319
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
K + M P G +V+MGD + +RA+ +L+ ++ GKRL V SKQ + S
Sbjct: 320 EKVKFMKSVP----GTALVEMGDEYAVDRAITHLN-SIKVFGKRLNVCVSKQHAVIP-SQ 373
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGR 209
+EL DGS S+KDF +R NRF + A KN IQPPS +LH++N PP +++EQL +
Sbjct: 374 VFELEDGSSSYKDFAMTRNNRFSSAGQASKNIIQPPSAVLHYYNVPPCVSQEQLLRLCSE 433
Query: 210 TD 211
D
Sbjct: 434 HD 435
>gi|242021201|ref|XP_002431034.1| heterogeneous nuclear ribonucleoprotein L, putative [Pediculus
humanus corporis]
gi|212516263|gb|EEB18296.1| heterogeneous nuclear ribonucleoprotein L, putative [Pediculus
humanus corporis]
Length = 273
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGK-RLAVAYSKQVFLSDVSHPYELPDGSESFK 161
EG M+QMGD + ER + +L+ + + K RL + +SKQ FLSDV++P+ LPDGS SFK
Sbjct: 69 EGAAMIQMGDGSAVERCVQHLNNAPMFDSKNRLQLGFSKQPFLSDVTNPFVLPDGSPSFK 128
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
DF ++ NRF N M++KNRIQ PS++LHFFN PP +TE+ L D+
Sbjct: 129 DFIRNKYNRFANLAMSLKNRIQSPSRILHFFNTPPSLTEKMLLDL 173
>gi|154147563|ref|NP_001093751.1| heterogeneous nuclear ribonucleoprotein L [Xenopus (Silurana)
tropicalis]
gi|140832702|gb|AAI35425.1| hnrpl protein [Xenopus (Silurana) tropicalis]
Length = 538
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 120/264 (45%), Gaps = 70/264 (26%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD--GPPS---RPGPLLPEPPRRLPTPSGPPSMP 56
+ P++LNV+KND ++WDYT P L D G P+ R PLL + P P
Sbjct: 218 AKPSRLNVFKNDQDTWDYTNPALSGQGDAAGNPNKRQRNPPLLGDHPAEYGGPHA----- 272
Query: 57 NYRGGYPDDDYYGAPPAFEFER---------------------------------SYNSP 83
Y G Y ++ Y PP +E R +SP
Sbjct: 273 GYHGHYHEEAYGPPPPHYESRRMGPPPVGAPRRGPSRYAPQYGHPPPPPPPEYGPHADSP 332
Query: 84 VLDKF---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGN 122
VL + + K + M P G MV+M D + +RA+ +
Sbjct: 333 VLMVYGLDPSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITH 388
Query: 123 LSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRI 182
L+ + G++L+V SKQ + Y L DGS SFK F+GSR NRF +P+ A KNRI
Sbjct: 389 LNNNFMF-GQKLSVCVSKQQSIVP-GQSYGLEDGSCSFKVFSGSRNNRFTSPEQAAKNRI 446
Query: 183 QPPSQLLHFFNAPPDITEEQLTDI 206
Q PS +LHFFNAPP++TEE ++
Sbjct: 447 QQPSSVLHFFNAPPEVTEENFIEM 470
>gi|348524683|ref|XP_003449852.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 518
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 115/255 (45%), Gaps = 62/255 (24%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSG--PPSMPNYR 59
+ P +LNV+KND ++WDYT P L + G P+ P +R P G PP +
Sbjct: 207 AKPARLNVFKNDQDTWDYTNPNL--SGQGDPNAN----PNKRQRQPALLGDHPPDYGGPQ 260
Query: 60 GGYP--DDDYYGAPP--------------------------------------------- 72
GGY +DD YG PP
Sbjct: 261 GGYHGYNDDSYGPPPPHRMGPGMGGRGRGNQRYGPGYGPPPPEYGPHADSPVLMVYGLEP 320
Query: 73 -AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNG 131
++ +N L + + + M P G MV+MGD S +RA+ +L+ L G
Sbjct: 321 SKINADKVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYSVDRAITHLNNNFLF-G 375
Query: 132 KRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHF 191
++L V SKQ + Y+L D + SFKDF GSR NRF +P+ A KNRIQ PS +LHF
Sbjct: 376 QKLNVCVSKQQAIVP-GQCYQLEDNTSSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHF 434
Query: 192 FNAPPDITEEQLTDI 206
FNA PDI+ E +
Sbjct: 435 FNAQPDISAEIFNQV 449
>gi|195584911|ref|XP_002082247.1| GD25314 [Drosophila simulans]
gi|194194256|gb|EDX07832.1| GD25314 [Drosophila simulans]
Length = 388
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 117/234 (50%), Gaps = 41/234 (17%)
Query: 2 SAPTKLNVYKND-SESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPP-SMPNYR 59
+ P KLNVYKN+ SWDYT T G++ P L +PP P + PP P Y
Sbjct: 156 AKPEKLNVYKNEPDTSWDYTLST-GKSLFSIPENVVMLESQPPLLGPGAAFPPFGAPEYH 214
Query: 60 GGYPDDDYYGA---PPAFEFERS-----YNSPVLDKFIGKPRGMSGPPSG---------- 101
P++ + GA P E + N+PV G+ +G G
Sbjct: 215 TTTPEN-WKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDK 273
Query: 102 -------------------PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQV 142
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ
Sbjct: 274 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 333
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
FLS+V +P+ LPD S +FK++TGS+ NRF++P A KNRIQPPS++LHFF P
Sbjct: 334 FLSEVINPFLLPDHSPTFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFTHRP 387
>gi|226481403|emb|CAX73599.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 535
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 112/249 (44%), Gaps = 53/249 (21%)
Query: 4 PTKLNVYKNDSESWDYTQPTL---------GRTKDGPPSRPGPLLPEPPRRLPTPSGPPS 54
PT+L V +ND +SWD+ P L GR G S G R + S
Sbjct: 192 PTRLTVTRNDQDSWDFENPLLLSSPLNEADGR---GDISLLGRFERSRARHESSRSVNGG 248
Query: 55 MPNYRGGYPDDDYYGA---PPAFEFERSYNSPV----LDKFIGKPRGMSGPP-------- 99
Y G+ + G P +F + + N V LD G+P + P
Sbjct: 249 AFGYHDGFMKQNAVGISVPPASFLDQLALNYHVSRRGLDGLNGQPYTRAATPVIMVYNMD 308
Query: 100 -------------------------SGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRL 134
EG M QMGD LS +R + NLS+ L G L
Sbjct: 309 MDHMNCDRLFNLLCLYGNVVRIKFLRTKEGSAMAQMGDNLSVDRVITNLSEVPLM-GNAL 367
Query: 135 AVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNA 194
++ SKQ + DV PYELPDG+ SFKD++G R+NR++NP A KNRI PPS LH++N
Sbjct: 368 SIRPSKQQLILDVPKPYELPDGTPSFKDYSGCRENRYINPDKASKNRIYPPSNTLHYWNC 427
Query: 195 PPDITEEQL 203
PP+ T E+L
Sbjct: 428 PPNYTTEEL 436
>gi|158257950|dbj|BAF84948.1| unnamed protein product [Homo sapiens]
Length = 537
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 298
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 299 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 358
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 359 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 411
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +L ++N P +TEE T +
Sbjct: 412 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLRYYNVPLCVTEETFTKL 468
>gi|334313145|ref|XP_001365024.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 538
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 240 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 299
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 300 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 359
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 360 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQ 412
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TE+ +
Sbjct: 413 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEDTFAKL 469
>gi|391333478|ref|XP_003741140.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Metaseiulus occidentalis]
Length = 485
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 68 YGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTL 127
YG P +N L + + + + P GC MVQMGD S ERA+ N+ +
Sbjct: 263 YGLAPRINTSHLFNLFCLYGNVIRVKFLKSKP----GCAMVQMGDGPSVERAVQNVHNAV 318
Query: 128 LCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQ 187
+ + + + V +SKQ FL + Y+L DG+ SF++F+ SR NRF N ++A KNRI+PPS
Sbjct: 319 IFD-QTIQVNFSKQPFLHEEVKAYDLHDGTPSFREFSKSRNNRFTNTELAAKNRIRPPSN 377
Query: 188 LLHFFNAPPDITEEQLTDISGRTD 211
LHFFNAP DI+EE+L D+ + D
Sbjct: 378 TLHFFNAPNDISEERLKDVFKKED 401
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPP 43
+ P+KLNVYKND ++WDYT G+ KD P LL PP
Sbjct: 99 AKPSKLNVYKNDKDTWDYTGSLDGKEKD-PGRHKAALLGPPP 139
>gi|354483412|ref|XP_003503887.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 498
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGG 61
+ PT+LNV+KND ++WDYT P L + S +LP L S G
Sbjct: 223 AKPTRLNVFKNDQDTWDYTNPNLSGQGNPDGSFVLNILPCLFTGLVHFIDLGSGLCNAIG 282
Query: 62 YPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMG 121
P D P +R +N L + K + M P G MV+M D + +RA+
Sbjct: 283 LPVD---MGGPWMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAIT 335
Query: 122 NLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNR 181
+L+ + G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNR
Sbjct: 336 HLNNNFMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNR 393
Query: 182 IQPPSQLLHFFNAPPDITEEQLTDI 206
IQ PS +LHFFNAP ++TEE +I
Sbjct: 394 IQHPSNVLHFFNAPLEVTEENFFEI 418
>gi|335308902|ref|XP_003361415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Sus
scrofa]
Length = 552
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 42/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPR 44
PT+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 255 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSR 314
Query: 45 RLPTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIG 90
P + Y GG P + + R +N L I
Sbjct: 315 YRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIE 374
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL SKQ LS V S
Sbjct: 375 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNXX-SKQ--LSVVPSQ 426
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 427 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 483
>gi|296224059|ref|XP_002757888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Callithrix jacchus]
Length = 509
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 213 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 272
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 273 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 332
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +
Sbjct: 333 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIF 385
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 386 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 440
>gi|410955436|ref|XP_003984359.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Felis catus]
Length = 510
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 214 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 273
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 274 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 333
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +
Sbjct: 334 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIF 386
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 387 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 441
>gi|403269680|ref|XP_003926844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Saimiri
boliviensis boliviensis]
gi|33518884|gb|AAQ20083.1| stromal RNA regulating factor [Homo sapiens]
Length = 508
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 212 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 271
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 272 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 331
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +
Sbjct: 332 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIF 384
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 385 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 439
>gi|395731919|ref|XP_002812155.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pongo abelii]
Length = 509
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 213 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 272
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 273 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 332
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +
Sbjct: 333 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIF 385
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 386 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 440
>gi|397493591|ref|XP_003817687.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Pan paniscus]
Length = 505
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 109/234 (46%), Gaps = 39/234 (16%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 209 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 268
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 269 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 328
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE 152
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ + S +E
Sbjct: 329 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQHSVVP-SQIFE 382
Query: 153 LPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
L DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 383 LEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 436
>gi|189235383|ref|XP_001809748.1| PREDICTED: similar to smooth CG9218-PG [Tribolium castaneum]
Length = 321
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 78/124 (62%), Gaps = 20/124 (16%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLL--------------------CNGKRLAVAYSKQV 142
EG MVQMGD+++ ER + NL+ + + +L +A+SKQ
Sbjct: 109 EGTAMVQMGDSVAVERCVQNLNNVTVGLTGAAPLSHHNNVKDDKNNQSEHKLQLAFSKQP 168
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V++PY LPD S S+K++ ++ NRFMNP MA KNRIQPPS++LHFFN PP +TE +
Sbjct: 169 FLSEVTNPYPLPDKSPSYKEYITNKNNRFMNPAMASKNRIQPPSKILHFFNTPPQVTESE 228
Query: 203 LTDI 206
L +
Sbjct: 229 LVQV 232
>gi|402890608|ref|XP_003908575.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Papio anubis]
Length = 403
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 107 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 166
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 167 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 226
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +
Sbjct: 227 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQIF 279
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 280 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 334
>gi|270003599|gb|EFA00047.1| hypothetical protein TcasGA2_TC002855 [Tribolium castaneum]
Length = 393
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 78/124 (62%), Gaps = 20/124 (16%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLL--------------------CNGKRLAVAYSKQV 142
EG MVQMGD+++ ER + NL+ + + +L +A+SKQ
Sbjct: 181 EGTAMVQMGDSVAVERCVQNLNNVTVGLTGAAPLSHHNNVKDDKNNQSEHKLQLAFSKQP 240
Query: 143 FLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQ 202
FLS+V++PY LPD S S+K++ ++ NRFMNP MA KNRIQPPS++LHFFN PP +TE +
Sbjct: 241 FLSEVTNPYPLPDKSPSYKEYITNKNNRFMNPAMASKNRIQPPSKILHFFNTPPQVTESE 300
Query: 203 LTDI 206
L +
Sbjct: 301 LVQV 304
>gi|27820087|gb|AAO25069.1| GH05823p [Drosophila melanogaster]
Length = 311
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 71/96 (73%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ ER + +L+ + G ++ +A+SKQ FLS+V +P+ LPD S SFK+
Sbjct: 207 EGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKE 266
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDI 198
+TGS+ NRF++P A KNRIQPPS++LHFFN P +
Sbjct: 267 YTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPARL 302
>gi|109102687|ref|XP_001109883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Macaca mulatta]
Length = 508
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSR-------------------PGPLLPEPPRRL 46
+LNV +ND++SWDYT+P LGR G + GPLLP P R
Sbjct: 212 RLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYR 271
Query: 47 PTPSGPPSMPNY----------RGGYPDDDYYGAPPAFEFE----RSYNSPVLDKFIGKP 92
P + Y GG P + + R +N L I K
Sbjct: 272 MGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKV 331
Query: 93 RGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPY 151
+ M P G +V+MGD + ERA+ +L+ L GKRL + SKQ S V S +
Sbjct: 332 KFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLIFSVSKQ--HSVVPSQIF 384
Query: 152 ELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 385 ELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKL 439
>gi|297307105|ref|NP_001167465.1| heterogeneous nuclear ribonucleoprotein L [Xenopus laevis]
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xenopus laevis]
Length = 538
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 119/263 (45%), Gaps = 69/263 (26%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD--GPPS---RPGPLLPEPPRRLPTPSGPPSMP 56
+ P++LNV+KND ++WDYT P L D G P+ R PLL + P P
Sbjct: 218 AKPSRLNVFKNDQDTWDYTNPGLSGQGDAAGNPNKRQRNPPLLGDHPAEYGGPHA----- 272
Query: 57 NYRGGYPDDDYYGAPPAFEFER--------------------------------SYNSPV 84
Y G Y ++ Y PP +E R +SPV
Sbjct: 273 GYHGHYHEEAYGPPPPHYESRRMGPPPVGAPRRGPSRYAPQYGHPPPPPPEYAPHADSPV 332
Query: 85 LDKF---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNL 123
L + + K + M P G MV+M D + +RA+ +L
Sbjct: 333 LMVYGLDPSKLNCDRVFNIFCLYGNLEKVKFMKSKP----GAAMVEMADGYAVDRAVTHL 388
Query: 124 SKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQ 183
+ + G++L+V SKQ + Y L DGS SFK F+GSR NRF + + A KNRIQ
Sbjct: 389 NNNFMF-GQKLSVCVSKQQSIVP-GQSYGLEDGSCSFKVFSGSRNNRFTSAEQAAKNRIQ 446
Query: 184 PPSQLLHFFNAPPDITEEQLTDI 206
PS +LHFFNAPPD+TE+ ++
Sbjct: 447 QPSSVLHFFNAPPDVTEDNFIEM 469
>gi|256080365|ref|XP_002576452.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|238661720|emb|CAZ32689.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 544
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------DGPPSRPGPLLPEPPRRLPTPSGPPSMPN 57
PT+L V +ND +SWD+ P L T G S G R + S
Sbjct: 201 PTRLTVTRNDQDSWDFENPLLLSTSLNESDGRGDISLLGRFERSRARHESSRSVNGGSFG 260
Query: 58 YRGGYPDDDYYG--APPA-FEFERSYNSPV----LDKFIGKPRGMSGPP----------- 99
Y G+ + G PPA F + + N V LD G+P +
Sbjct: 261 YHDGFIKQNAVGLSVPPASFLDQLALNYHVSRRGLDGLNGQPYARASTAVIMVYNMDMDH 320
Query: 100 ----------------------SGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVA 137
EG M QMGD +S +R + NLS+ L G L++
Sbjct: 321 MNCDRLFNLLCLYGNVVRIKFLRTKEGSAMAQMGDNVSVDRVITNLSEVPLM-GNALSIR 379
Query: 138 YSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPD 197
SKQ + DV P+ELPDG+ SFKD++G R+NR++NP A KNRI PPS LH++N PP+
Sbjct: 380 PSKQQLILDVPKPFELPDGTPSFKDYSGCRENRYINPDKASKNRIYPPSHTLHYWNCPPN 439
Query: 198 ITEEQL 203
T E+L
Sbjct: 440 YTPEEL 445
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG M QMGDTLS +R + NLS L G +L + SKQ+ + DV P++LPDG+ SFKD
Sbjct: 675 EGSAMAQMGDTLSVDRVIRNLSDVPLL-GNQLQIRPSKQLVIVDVPKPFDLPDGTPSFKD 733
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+TG R+NR++NP+ A KNRI PPS LH++N PPD + +L I
Sbjct: 734 YTGCRENRYINPEKASKNRIYPPSNTLHYWNCPPDFSANELCQI 777
>gi|444525178|gb|ELV13969.1| Heterogeneous nuclear ribonucleoprotein L [Tupaia chinensis]
Length = 473
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 118/261 (45%), Gaps = 63/261 (24%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSGPPS 54
++ PT+LNV+KND ++WDYT P L D P S P PLL + P G PS
Sbjct: 152 ITTPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGEGRGFPS 210
Query: 55 MPNYRGG---------------------------------YPDDDY-------------- 67
+ + RG Y D+ Y
Sbjct: 211 VDS-RGSCAPARRPPRKFSPVLPLFPSHPPGGPHGGHHSHYHDEGYXTQVRTNTDSPVLL 269
Query: 68 -YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSK 125
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 270 VYGMDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNN 325
Query: 126 TLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPP 185
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ P
Sbjct: 326 NFMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHP 383
Query: 186 SQLLHFFNAPPDITEEQLTDI 206
S +LHFFNAP ++TEE +I
Sbjct: 384 SNVLHFFNAPLEVTEENFFEI 404
>gi|348538507|ref|XP_003456732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oreochromis
niloticus]
Length = 556
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 112/244 (45%), Gaps = 42/244 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR---TKDGPPSRPGPLLPEPP----------------- 43
PT+LNV KND+ESWDYT+P L R G + +L E P
Sbjct: 255 PTRLNVIKNDNESWDYTKPYLVRRDVHNRGKGRQRQAILGEHPSSYGDNGYGPPCPLLPL 314
Query: 44 ----RRLPTPSGPPSMPNYRGGYPDDDYYGAPPA------------FEFERSYNSPVLDK 87
R T P M +Y Y G P+ R +N L
Sbjct: 315 PGNSRYKLTSLDVPDMVSYPLPQSSSSYSGHAPSSVAMVSGLHPSKMNCTRIFNLFCLYG 374
Query: 88 FIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV 147
I K + M P G +V+MGD + +RA+ +L+ ++ GKRL V SKQ +
Sbjct: 375 NIEKVKFMKSVP----GTALVEMGDEYAVDRAITHLN-SIKVFGKRLNVCVSKQHAVIP- 428
Query: 148 SHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
S +EL DGS S+KDF +R NRF + A KN IQPPS +LH++N PP I+++ L +
Sbjct: 429 SQVFELEDGSSSYKDFAMTRNNRFSSAGQASKNIIQPPSAVLHYYNVPPCISQDHLLRLC 488
Query: 208 GRTD 211
D
Sbjct: 489 TEHD 492
>gi|126329101|ref|XP_001362792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 607
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 118/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 286 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 344
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 345 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 404
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 405 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 460
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+GSR NRF P+ A KNRIQ PS
Sbjct: 461 FMF-GQKLNVCVSKQQAIMP-GQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPS 518
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TE+ +I
Sbjct: 519 NVLHFFNAPLEVTEDNFFEI 538
>gi|395522271|ref|XP_003765161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Sarcophilus
harrisii]
Length = 510
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 118/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 189 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 247
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 248 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 307
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 308 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 363
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+GSR NRF P+ A KNRIQ PS
Sbjct: 364 FMF-GQKLNVCVSKQQAIMP-GQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPS 421
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TE+ +I
Sbjct: 422 NVLHFFNAPLEVTEDNFFEI 441
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 121/267 (45%), Gaps = 68/267 (25%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTL-GRTKDG---------PPSRPG------PLLPEPPRR 45
+ PT+LNV+KND ++WDYT P L G+ D P + P LL + P
Sbjct: 207 AKPTRLNVFKNDQDTWDYTNPNLSGQDADADGNWNNSQDPNANPNKRQRQPALLGDHPPE 266
Query: 46 LPTPSG------------------------PP-----SMPNYRG-----GYPDDDY---- 67
+P G PP +P Y G G P DY
Sbjct: 267 YGSPQGGYGHYDDTYGPPPPPPHYEGRRMGPPIGRGRGVPRYGGAQYGHGPPPPDYNAHA 326
Query: 68 -------YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERA 119
YG P +R +N L + + + M P G MV+MGD + +RA
Sbjct: 327 DSPVVMVYGLDPVKINADRVFNIFCLYGNVERVKFMKSKP----GAAMVEMGDCYAVDRA 382
Query: 120 MGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMK 179
+ +L+ T+L G++L V SKQ + Y+L DGS SFKDF G R NRF + A K
Sbjct: 383 VSHLNNTMLF-GQKLNVCVSKQQAIMP-GQSYQLEDGSCSFKDFHGYRNNRFTTSEQAAK 440
Query: 180 NRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRIQ PS +LHFFN+ PD + E ++I
Sbjct: 441 NRIQQPSNVLHFFNSQPDSSVEAFSEI 467
>gi|355755804|gb|EHH59551.1| hypothetical protein EGM_09690, partial [Macaca fascicularis]
Length = 501
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 180 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 238
Query: 52 --------------------PPSMPNYRGGYPDDDYYGAPPAFEFERSY----NSPVLDK 87
PP + RG P YG PP Y +SPVL
Sbjct: 239 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSPYGPQYGHPPPPPPPPEYGPHADSPVLMV 298
Query: 88 F---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
+ + K + M P G MV+M D + +RA+ +L+
Sbjct: 299 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 354
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 355 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 412
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 413 NVLHFFNAPLEVTEENFFEI 432
>gi|339233762|ref|XP_003381998.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316979122|gb|EFV61952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 820
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
MVQMG+ ++A R + NL L+ GKR+ VA S+Q L++V P E+PDGS S+KDFTGS
Sbjct: 566 MVQMGEPIAAGRVIENLHNALVF-GKRIHVAMSRQRQLNEVRDPTEMPDGSSSYKDFTGS 624
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF +P +A KNRI P + L+FFNAPP++TEE+L +
Sbjct: 625 RFQRFTSPDIAAKNRITNPQKYLYFFNAPPNVTEERLISL 664
>gi|426388622|ref|XP_004060732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Gorilla
gorilla gorilla]
Length = 589
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 268 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 326
Query: 52 ----------PPSMPNYRGGYPDDDYYGAPPAF--------------EFERSYNSPVLDK 87
PP R G P + P + E+ +SPVL
Sbjct: 327 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGXXXPPPPPPEYGPHADSPVLMV 386
Query: 88 F---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
+ + K + M P G MV+M D + +RA+ +L+
Sbjct: 387 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 442
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 443 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 500
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 501 NVLHFFNAPLEVTEENFFEI 520
>gi|213510846|ref|NP_001133491.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
gi|209154218|gb|ACI33341.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
Length = 548
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 4 PTKLNVYKNDSESWDYTQPTL----------GRTKDG----PPSRPG--------PLLPE 41
PT+LNV +ND+ESWDYT+P L GR + PS G PLLP
Sbjct: 249 PTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQRQAILGEHPSSYGDNGYGSHCPLLPL 308
Query: 42 P--PRRLPTPSGPPSMPNY---------RGGYPDDDYYGAPPA-FEFERSYNSPVLDKFI 89
P R + P + Y G G PA R +N L I
Sbjct: 309 PGNSRYKLSSHDIPEVVAYPLPQSSSYNHGSSSVAMVSGLHPAKMNCTRIFNLFCLYGNI 368
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
K + M P G +V+MGD + +RA+ +L+ ++ GKRL V SKQ + S
Sbjct: 369 EKVKFMKSVP----GTALVEMGDEYAVDRAITHLN-SIKVFGKRLNVCVSKQHAVIP-SQ 422
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGR 209
+EL DGS S+KDF +R NRF + A KN IQPPS +LH++N PP I+E+QL +
Sbjct: 423 VFELEDGSSSYKDFAMTRNNRFTSQGQASKNIIQPPSCVLHYYNVPPCISEDQLLRLCSE 482
Query: 210 TD 211
D
Sbjct: 483 HD 484
>gi|188528957|ref|NP_001120904.1| heterogeneous nuclear ribonucleoprotein L-like [Xenopus (Silurana)
tropicalis]
gi|183986223|gb|AAI66362.1| hnrpll protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 109/237 (45%), Gaps = 41/237 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTK------------DGPPS-------RPGPLLPEPPR 44
PT+LNV +ND++SWDY++P L R D P S GPLLP P
Sbjct: 233 PTRLNVIRNDNDSWDYSKPYLSRRDRGKGRQRQAILGDHPSSYRYDGYGNHGPLLPLPNL 292
Query: 45 RLPTPSGPPSMPNYRGGYPDDDY-YGAPPA-------------FEFERSYNSPVLDKFIG 90
P + Y Y +G PP R +N L I
Sbjct: 293 YRMGSRDTPELVAYPLPQASSSYMHGGPPVGSVAMVSGLHQQKMNCSRVFNLFCLYGNIE 352
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SH 149
K + M P G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S
Sbjct: 353 KVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKLF-GKRLNVCVSKQ--HSVVPSQ 405
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P + EE +
Sbjct: 406 IFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLSVEEEMFQKL 462
>gi|431909696|gb|ELK12854.1| Heterogeneous nuclear ribonucleoprotein L [Pteropus alecto]
Length = 629
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 308 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 366
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 367 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 426
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 427 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 482
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 483 FMF-GQKLKVCVSKQPAIMP-GQSYGLEDGSSSYKDFSESRNNRFSTPEQAAKNRIQHPS 540
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 541 NVLHFFNAPLEVTEENFFEI 560
>gi|327287724|ref|XP_003228578.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 553
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 119/259 (45%), Gaps = 60/259 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD--GPPS---RPGPLL----------------- 39
+ PT+LNV+KND ++WDYT P L + G P+ R PLL
Sbjct: 232 AKPTRLNVFKNDQDTWDYTNPNLSGQGEPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGH 291
Query: 40 -------PEPPRRLPTPSGPPSMPNYRG--------GY-----------PDDD-----YY 68
P PP GPP +RG G+ P D Y
Sbjct: 292 YHDEGYGPPPPHYEGRRMGPPVGGRHRGPGRYGPQYGHPPPPPPPPEYGPHADSPVLMVY 351
Query: 69 GAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTL 127
G + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 352 GLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNF 407
Query: 128 LCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQ 187
+ + ++L V SKQ + Y L DGS S+KDF+GSR NRF P+ A KNRIQ PS
Sbjct: 408 MFD-QKLNVCVSKQQAIMP-GQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSN 465
Query: 188 LLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TE+ +I
Sbjct: 466 VLHFFNAPLEVTEDNFYEI 484
>gi|211828181|gb|AAH69184.2| HNRNPL protein [Homo sapiens]
Length = 572
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 251 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 309
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 310 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 369
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 370 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 425
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 426 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 483
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 484 NVLHFFNAPLEVTEENFFEI 503
>gi|395859744|ref|XP_003802192.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Otolemur
garnettii]
Length = 557
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 236 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 294
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 295 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 354
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 355 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 410
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 411 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 468
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 469 NVLHFFNAPLEVTEENFFEI 488
>gi|343959210|dbj|BAK63460.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 558
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 237 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 295
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 296 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 355
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 356 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 411
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 412 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 469
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 470 NVLHFFNAPLEVTEENFFEI 489
>gi|119577230|gb|EAW56826.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Homo
sapiens]
Length = 557
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 236 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 294
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 295 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 354
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 355 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 410
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 411 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 468
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 469 NVLHFFNAPLEVTEENFFEI 488
>gi|441652820|ref|XP_004093177.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Nomascus leucogenys]
Length = 590
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 269 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 327
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 328 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 387
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 388 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 443
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 444 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 501
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 502 NVLHFFNAPLEVTEENFFEI 521
>gi|300796171|ref|NP_001178959.1| heterogeneous nuclear ribonucleoprotein L [Bos taurus]
gi|410983084|ref|XP_003997873.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Felis catus]
gi|296477716|tpg|DAA19831.1| TPA: heterogeneous nuclear ribonucleoprotein L [Bos taurus]
Length = 588
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 267 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 325
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 326 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 385
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 386 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 441
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 442 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 499
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 500 NVLHFFNAPLEVTEENFFEI 519
>gi|52632383|ref|NP_001524.2| heterogeneous nuclear ribonucleoprotein L isoform a [Homo sapiens]
gi|388452706|ref|NP_001252929.1| heterogeneous nuclear ribonucleoprotein L [Macaca mulatta]
gi|114676995|ref|XP_512642.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 6 [Pan
troglodytes]
gi|359318672|ref|XP_003638880.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
gi|402905454|ref|XP_003915534.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Papio anubis]
gi|215274006|sp|P14866.2|HNRPL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|119577232|gb|EAW56828.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_c [Homo
sapiens]
gi|306921585|dbj|BAJ17872.1| heterogeneous nuclear ribonucleoprotein L [synthetic construct]
gi|387542466|gb|AFJ71860.1| heterogeneous nuclear ribonucleoprotein L isoform a [Macaca
mulatta]
gi|410298568|gb|JAA27884.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 268 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 326
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 327 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 386
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 387 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 442
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 443 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 500
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 501 NVLHFFNAPLEVTEENFFEI 520
>gi|296233743|ref|XP_002807879.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Callithrix jacchus]
Length = 589
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 268 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 326
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 327 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 386
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 387 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 442
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 443 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 500
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 501 NVLHFFNAPLEVTEENFFEI 520
>gi|380799767|gb|AFE71759.1| heterogeneous nuclear ribonucleoprotein L isoform a, partial
[Macaca mulatta]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 146 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 204
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 205 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 264
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 265 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 320
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 321 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 378
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 379 NVLHFFNAPLEVTEENFFEI 398
>gi|410337383|gb|JAA37638.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 268 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 326
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 327 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 386
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 387 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 442
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 443 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 500
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 501 NVLHFFNAPLEVTEENFFEI 520
>gi|52632385|ref|NP_001005335.1| heterogeneous nuclear ribonucleoprotein L isoform b [Homo sapiens]
gi|332855272|ref|XP_001167265.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 4 [Pan
troglodytes]
gi|397482177|ref|XP_003812309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Pan paniscus]
gi|403305233|ref|XP_003943172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Saimiri
boliviensis boliviensis]
gi|158257662|dbj|BAF84804.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 135 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 193
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 194 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 253
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 254 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 309
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 310 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 367
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 368 NVLHFFNAPLEVTEENFFEI 387
>gi|426243770|ref|XP_004015721.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Ovis aries]
Length = 598
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 277 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 335
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 336 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 395
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 396 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 451
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 452 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 509
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 510 NVLHFFNAPLEVTEENFFEI 529
>gi|440910313|gb|ELR60121.1| Heterogeneous nuclear ribonucleoprotein L, partial [Bos grunniens
mutus]
Length = 512
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 191 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 249
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 250 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 309
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 310 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 365
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 366 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 423
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 424 NVLHFFNAPLEVTEENFFEI 443
>gi|67971924|dbj|BAE02304.1| unnamed protein product [Macaca fascicularis]
Length = 456
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLL---------------- 39
+ PT+LNV+KND ++WDYT P L D P S P PLL
Sbjct: 135 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDRPAEYGGPHGGYHS 193
Query: 40 --------PEPPRRLPTPSGPPSMPNYRG--------GY-----------PDDD-----Y 67
P PP GPP + RG G+ P D
Sbjct: 194 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 253
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 254 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 309
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 310 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 367
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 368 NVLHFFNAPLEVTEENFFEI 387
>gi|189053899|dbj|BAG36406.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 237 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 295
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 296 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 355
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 356 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GSAMVEMADGYAVDRAITHLNNN 411
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 412 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 469
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 470 NVLHFFNAPLEVTEENFFEI 489
>gi|32356|emb|CAA34261.1| unnamed protein product [Homo sapiens]
gi|226731|prf||1604358A nuclear RNP protein L
Length = 558
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 237 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 295
Query: 52 --------------------PPSMPNYRGGYPDDDYYGAPPAFEFERSY----NSPVLDK 87
PP + RG YG PP Y +SPVL
Sbjct: 296 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 355
Query: 88 F---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
+ + K + M P G MV+M D + +RA+ +L+
Sbjct: 356 YGLDQSKMNGDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 411
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 412 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 469
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 470 NVLHFFNAPLEVTEENFFEI 489
>gi|119577231|gb|EAW56827.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Homo
sapiens]
Length = 590
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 269 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 327
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 328 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 387
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 388 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 443
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 444 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 501
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 502 NVLHFFNAPLEVTEENFFEI 521
>gi|11527777|dbj|BAB18649.1| heterogeneous nuclear ribonucleoprotein L [Homo sapiens]
Length = 589
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 268 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 326
Query: 52 --------------------PPSMPNYRGGYPDDDYYGAPPAFEFERSY----NSPVLDK 87
PP + RG YG PP Y +SPVL
Sbjct: 327 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 386
Query: 88 F---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
+ + K + M P G MV+M D + +RA+ +L+
Sbjct: 387 YGLDQSKMNGDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 442
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 443 FMF-GQKLNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 500
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 501 NVLHFFNAPLEVTEENFFEI 520
>gi|149056441|gb|EDM07872.1| rCG53531, isoform CRA_b [Rattus norvegicus]
Length = 456
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 135 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 193
Query: 52 --------------------PPSMPNYRG-------------GYPDDDY----------- 67
PP + RG P DY
Sbjct: 194 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMV 253
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 254 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 309
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 310 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 367
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 368 NVLHFFNAPLEVTEENFFEI 387
>gi|197245939|gb|AAI69048.1| Hnrnpl protein [Rattus norvegicus]
Length = 571
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 250 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 308
Query: 52 --------------------PPSMPNYRG-------------GYPDDDY----------- 67
PP + RG P DY
Sbjct: 309 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMV 368
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 369 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 424
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 425 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 482
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 483 NVLHFFNAPLEVTEENFFEI 502
>gi|20072624|gb|AAH27206.1| Heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|148692161|gb|EDL24108.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Mus
musculus]
gi|149056440|gb|EDM07871.1| rCG53531, isoform CRA_a [Rattus norvegicus]
Length = 555
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 234 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 292
Query: 52 --------------------PPSMPNYRG-------------GYPDDDY----------- 67
PP + RG P DY
Sbjct: 293 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMV 352
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 353 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 408
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 409 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 466
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 467 NVLHFFNAPLEVTEENFFEI 486
>gi|194215401|ref|XP_001496787.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Equus
caballus]
Length = 509
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV++ND ++WDYT P L D P S P PLL + P P G
Sbjct: 188 AKPTRLNVFRNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 246
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 247 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 306
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 307 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 362
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G++L V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 363 FMF-GQKLKVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 420
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 421 NVLHFFNAPLEVTEENFFEI 440
>gi|183980004|ref|NP_796275.3| heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|197927209|ref|NP_116008.2| heterogeneous nuclear ribonucleoprotein L isoform b [Rattus
norvegicus]
gi|215273994|sp|Q8R081.2|HNRPL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|71119320|gb|AAH99683.1| Hnrpl protein [Mus musculus]
Length = 586
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 265 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 323
Query: 52 --------------------PPSMPNYRG-------------GYPDDDY----------- 67
PP + RG P DY
Sbjct: 324 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMV 383
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 384 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 439
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 440 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 497
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 498 NVLHFFNAPLEVTEENFFEI 517
>gi|348563003|ref|XP_003467298.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cavia
porcellus]
Length = 586
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 265 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 323
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 324 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 383
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 384 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 439
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 440 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 497
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 498 NVLHFFNAPLEVTEENFFEI 517
>gi|351695246|gb|EHA98164.1| Heterogeneous nuclear ribonucleoprotein L [Heterocephalus glaber]
Length = 539
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 113/238 (47%), Gaps = 39/238 (16%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD------------GPPSRPGPLLPEPPRRLPTP 49
+ PT+LNV+KND ++WDYT P L G P G + PT
Sbjct: 207 AKPTRLNVFKNDQDTWDYTNPNLSGQAHFINLGSGLCNAIGLPVDMGEGIGVTLAVTPTN 266
Query: 50 S-GPP-----SMPNYR-----------GGYPDD---DYYGAPPA-FEFERSYNSPVLDKF 88
+ G P ++ N R G + D YG + +R +N L
Sbjct: 267 AKGSPLSWEITLQNMRLKLQPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGN 326
Query: 89 IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVS 148
+ K + M P G MV+M D + +RA+ +L+ + G+++ V SKQ +
Sbjct: 327 VEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNVCVSKQPAIMP-G 380
Query: 149 HPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 381 QSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 438
>gi|291390016|ref|XP_002711505.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oryctolagus
cuniculus]
Length = 586
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG---- 51
+ PT+LNV+KND ++WDYT P L D P S P PLL + P P G
Sbjct: 265 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 323
Query: 52 --------------------PPSMPNYRG--------GY-----------PDDD-----Y 67
PP + RG G+ P D
Sbjct: 324 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMV 383
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 384 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 439
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 440 FMF-GQKMNVCVSKQPAIMP-RQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 497
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 498 NVLHFFNAPLEVTEENFFEI 517
>gi|148692162|gb|EDL24109.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Mus
musculus]
Length = 567
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 116/260 (44%), Gaps = 62/260 (23%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLL---------------- 39
+ PT+LNV+KND ++WDYT P L D P S P PLL
Sbjct: 246 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHGGYHS 304
Query: 40 --------PEPPRRLPTPSGPPSMPNYRG-------------GYPDDDY----------- 67
P PP GPP + RG P DY
Sbjct: 305 HYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMV 364
Query: 68 YGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
YG + +R +N L + K + M P G MV+M D + +RA+ +L+
Sbjct: 365 YGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNN 420
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPS 186
+ G+++ V SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS
Sbjct: 421 FMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPS 478
Query: 187 QLLHFFNAPPDITEEQLTDI 206
+LHFFNAP ++TEE +I
Sbjct: 479 NVLHFFNAPLEVTEENFFEI 498
>gi|74194841|dbj|BAE26011.1| unnamed protein product [Mus musculus]
Length = 592
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 125/297 (42%), Gaps = 99/297 (33%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPE-------------- 41
+ PT+LNV+KND ++WDYT P L D P S P PLL +
Sbjct: 234 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGEGRGFPSV 292
Query: 42 -----------PPRR----LPT-PSGPPSMPN--YRGGYPDDDYYGAPPAFEFER----- 78
PPR+ LP PS PP P+ Y Y D+ Y PP +E R
Sbjct: 293 DSRGSCAPARRPPRKFSPVLPLFPSHPPGGPHGGYHSHYHDEGYGPPPPHYEGRRMGPPV 352
Query: 79 ----------------------------SYNSPVLDKF---------------------I 89
+SPVL + +
Sbjct: 353 GGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNV 412
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
K + M P G MV+M D + +RA+ +L+ + G+++ V SKQ +
Sbjct: 413 EKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNVCVSKQPAIMP-GQ 466
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 467 SYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 523
>gi|197927211|ref|NP_001128232.1| heterogeneous nuclear ribonucleoprotein L isoform a [Rattus
norvegicus]
Length = 623
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 125/297 (42%), Gaps = 99/297 (33%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPE-------------- 41
+ PT+LNV+KND ++WDYT P L D P S P PLL +
Sbjct: 265 AKPTRLNVFKNDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGEGRGFPSV 323
Query: 42 -----------PPRR----LPT-PSGPPSMPN--YRGGYPDDDYYGAPPAFEFER----- 78
PPR+ LP PS PP P+ Y Y D+ Y PP +E R
Sbjct: 324 DSRGSCAPARRPPRKFSPVLPLFPSHPPGGPHGGYHSHYHDEGYGPPPPHYEGRRMGPPV 383
Query: 79 ----------------------------SYNSPVLDKF---------------------I 89
+SPVL + +
Sbjct: 384 GGHRRGPSRYGPQYGHPPPPPPPPDYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNV 443
Query: 90 GKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
K + M P G MV+M D + +RA+ +L+ + G+++ V SKQ +
Sbjct: 444 EKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNVCVSKQPAIMP-GQ 497
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 498 SYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 554
>gi|350854988|emb|CAZ32696.2| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 522
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L V SKQ + DVS P++LPDGS SFKD
Sbjct: 331 EGSAMVEMGDVESATRLIRNLSGVSFM-GNQLMVRTSKQDVILDVSSPFQLPDGSPSFKD 389
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
++ R NR+ MA KNRI PPS+ LH++NAPP I+ +L +
Sbjct: 390 YSKDRNNRYTTAIMAKKNRIHPPSRTLHYWNAPPKISNNELLEF 433
>gi|256080379|ref|XP_002576459.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 597
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L V SKQ + DVS P++LPDGS SFKD
Sbjct: 406 EGSAMVEMGDVESATRLIRNLSGVSFM-GNQLMVRTSKQDVILDVSSPFQLPDGSPSFKD 464
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
++ R NR+ MA KNRI PPS+ LH++NAPP I+ +L +
Sbjct: 465 YSKDRNNRYTTAIMAKKNRIHPPSRTLHYWNAPPKISNNELLEF 508
>gi|226481683|emb|CAX73739.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L + SKQ + DVS P++LPDGS SFKD
Sbjct: 330 EGSAMVEMGDADSATRLIRNLSGVSFM-GNQLMIRNSKQDVILDVSSPFQLPDGSPSFKD 388
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F+ R NR+ MA KNR+ PPS+ LH++NAPP I+ L ++
Sbjct: 389 FSKDRNNRYTTSIMAKKNRVYPPSRTLHYWNAPPKISNNALLEL 432
>gi|226481681|emb|CAX73738.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L + SKQ + DVS P++LPDGS SFKD
Sbjct: 330 EGSAMVEMGDADSATRLIRNLSGVSFM-GNQLMIRNSKQDVILDVSSPFQLPDGSPSFKD 388
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F+ R NR+ MA KNR+ PPS+ LH++NAPP I+ L ++
Sbjct: 389 FSKDRNNRYTTSIMAKKNRVYPPSRTLHYWNAPPKISNNALLEL 432
>gi|226481685|emb|CAX73740.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 356
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L + SKQ + DVS P++LPDGS SFKD
Sbjct: 168 EGSAMVEMGDADSATRLIRNLSGVSFM-GNQLMIRNSKQDVILDVSSPFQLPDGSPSFKD 226
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
F+ R NR+ MA KNR+ PPS+ LH++NAPP I+ L ++
Sbjct: 227 FSKDRNNRYTTSIMAKKNRVYPPSRTLHYWNAPPKISNNALLEL 270
>gi|260803908|ref|XP_002596831.1| hypothetical protein BRAFLDRAFT_99727 [Branchiostoma floridae]
gi|229282091|gb|EEN52843.1| hypothetical protein BRAFLDRAFT_99727 [Branchiostoma floridae]
Length = 525
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 67 YYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKT 126
Y P ER +N L + K + M P G MVQMGD + ER + NLS
Sbjct: 319 YGMVPNKMNCERLFNLLCLYGNVMKIKFMKSKP----GSAMVQMGDPSAVERCINNLSTC 374
Query: 127 LLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAM--KNRIQP 184
+L G++LA++YS+Q F+ + P+ L DG+ S+ DFT S+ N + ++ RIQ
Sbjct: 375 VLF-GQQLALSYSRQKFIDEKGQPFLLEDGTSSYTDFTNSKNNSAVEHVCSLTPHARIQQ 433
Query: 185 PSQLLHFFNAPPDITEEQLTDIS 207
PS++LHFFNAPPD TEE L ++
Sbjct: 434 PSKVLHFFNAPPDATEESLRQLT 456
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGR--TKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNY 58
++ PTKLNV+KNDSE+WDYT P LG P GPLL +PP + G PN+
Sbjct: 157 ITTPTKLNVHKNDSETWDYTNPNLGSGGGDQQPRKNQGPLLRDPPPQYGNGRGGAGPPNF 216
>gi|226467722|emb|CAX69737.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 562
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MV+MGD SA R + NLS G +L + SKQ + DVS P++LPDGS SFKD
Sbjct: 330 EGSAMVEMGDADSATRLIRNLSGVSFM-GNQLMIRNSKQDVILDVSSPFQLPDGSPSFKD 388
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGR 209
F+ R NR+ MA KNR+ PPS+ LH++NAPP I+ L ++ +
Sbjct: 389 FSKDRNNRYTTSIMAKKNRVYPPSRTLHYWNAPPKISNNALLELVKK 435
>gi|345311818|ref|XP_003429156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L
[Ornithorhynchus anatinus]
Length = 693
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G++L V
Sbjct: 336 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKLNV 390
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+GSR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 391 CVSKQQAIMP-GQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 449
Query: 197 DITEEQLTDI 206
++TE+ +I
Sbjct: 450 EVTEDNFFEI 459
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPR-RLPTPSGPPSMPNYR 59
+ PT+LNV+KND ++WDYT P L + G S L PP R P P P +P R
Sbjct: 182 AKPTRLNVFKNDQDTWDYTNPNL--SGQGNASARLVSLRRPPTPRGPCPCSAPPIPARR 238
>gi|324504296|gb|ADY41855.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 626
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
CM QMG+ + NL T + G+++A+ SKQ L ++ P+ LPDG+ SF+D+TG
Sbjct: 453 CMAQMGNVREVYTTIENLHGTTVF-GQKIALRPSKQQVLHEIRDPFTLPDGTPSFRDYTG 511
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
SR R+ P++A +NRI P+ +LH+FNAP +TEE+L ++
Sbjct: 512 SRNQRYTTPELAARNRIVKPTNVLHWFNAPVTMTEEKLKEL 552
>gi|324503755|gb|ADY41626.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 614
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
CM QMG+ + NL T + G+++A+ SKQ L ++ P+ LPDG+ SF+D+TG
Sbjct: 441 CMAQMGNVREVYTTIENLHGTTVF-GQKIALRPSKQQVLHEIRDPFTLPDGTPSFRDYTG 499
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
SR R+ P++A +NRI P+ +LH+FNAP +TEE+L ++
Sbjct: 500 SRNQRYTTPELAARNRIVKPTNVLHWFNAPVTMTEEKLKEL 540
>gi|156378504|ref|XP_001631182.1| predicted protein [Nematostella vectensis]
gi|156218218|gb|EDO39119.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 107/233 (45%), Gaps = 44/233 (18%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLP--------------------EPPRR 45
+LNV KNDSE++DYTQ PP + G L P PP
Sbjct: 223 QLNVRKNDSETYDYTQDKGPGMLGHPPPKQGLLSPPPPAYGGGPPAYGGAPNYGGAPPMG 282
Query: 46 L-PTPSGPPSMPNYR----GGYP------DDDYYGAPPAFEFERSYNSPVLDKFI-GKPR 93
P P M YR GG D D F Y + + KF+ GKP
Sbjct: 283 YGAQPMQAPQMQTYRNHPSGGNVIMVYGLDKDKMNCDRLFNLLCCYGNVIKIKFLLGKP- 341
Query: 94 GMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYEL 153
G M ++ + ++ M NLSK L + ++L ++SKQ +L + ++ L
Sbjct: 342 ----------GTAMAELHEHVACNTVMENLSKMTLFD-QQLEFSFSKQDYLVEPANVPNL 390
Query: 154 PDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
PDGS SFK F S+ NRF + + KNR+ P ++LHFFNAP D TEEQ+ ++
Sbjct: 391 PDGSPSFKSFDNSKNNRFTSATASSKNRVFTPMKVLHFFNAPVDCTEEQIREM 443
>gi|355694931|gb|AER99834.1| heteroproteinous nuclear ribonucleoprotein L [Mustela putorius
furo]
Length = 239
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G++L V
Sbjct: 89 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKLNV 143
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 144 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 202
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 203 EVTEENFFEI 212
>gi|379318420|pdb|3TO8|A Chain A, Crystal Structure Of The Two C-Terminal Rrm Domains Of
Heterogeneous Nuclear Ribonucleoprotein L (Hnrnp L)
Length = 218
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G++L V
Sbjct: 26 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKLNV 80
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 81 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 139
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 140 EVTEENFFEI 149
>gi|348530603|ref|XP_003452800.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Oreochromis niloticus]
Length = 539
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 4 PTKLNVYKNDSESWDYTQPTL-------GRTKDG----PPSRPG----PLLPEPPRR--- 45
P +LNV N++ SWDYT+P L GR + PS G PLLP P +
Sbjct: 240 PNRLNVICNNNTSWDYTKPFLLHRERGKGRQRHAILGEHPSNGGGPHWPLLPLPAKSRNW 299
Query: 46 -------------LPTPSGPPSMPNYRGGYPDDDYYGA----PPAFEFERSYNSPVLDKF 88
L + P S ++ G P R +N L
Sbjct: 300 RYSEEVQERICYPLLQKTSPTSSSSFLGKSITSSVTMVSGLHPVKMNCSRIFNLFCLYGN 359
Query: 89 IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVS 148
+ K + M P G +V+MGD + +RA+ +L+ + GK+ V SKQ + S
Sbjct: 360 VEKVKFMKSIP----GTALVEMGDEYAVDRAVTHLNGIKV-FGKKFNVCVSKQQAVIP-S 413
Query: 149 HPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+EL DG+ S++DF+ +R NRF + + + +N IQPP+ +LHF+NAPP++ + QL +
Sbjct: 414 QVFELGDGTCSYQDFSLTRNNRFSSAQ-STRNIIQPPATVLHFYNAPPNLNQHQLQKL 470
>gi|55562839|gb|AAH86392.1| Hnrpl protein [Rattus norvegicus]
gi|208609538|dbj|BAG72209.1| heterogenous nuclear ribonucleoprotein L [Rattus norvegicus]
Length = 245
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G+++ V
Sbjct: 53 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNV 107
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 108 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 166
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 167 EVTEENFFEI 176
>gi|20987847|gb|AAH30461.1| Hnrpl protein, partial [Mus musculus]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G+++ V
Sbjct: 15 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNV 69
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 70 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 128
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 129 EVTEENFFEI 138
>gi|390341476|ref|XP_785931.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Strongylocentrotus purpuratus]
Length = 570
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 53 PSMPNYRGGYPDDDYYGAPPA-FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMG 111
P M G P Y P ++ +N L + K + M P GC M +M
Sbjct: 344 PQMHQLGNGNPVVMVYNMNPGQMNCDKLFNLLCLYGNVIKVKFMKSKP----GCAMAEMS 399
Query: 112 DTLSAERAMGNLSKTLLCNGKRLAVAYSKQ--VFLSDVSHPYELPDGSESFKDFTGSRKN 169
D LS ERA+ NLS G + +++SKQ V LS V P EL DGS S D+T SR N
Sbjct: 400 DALSVERAITNLSNIEFF-GSAVQLSFSKQNCVALSQV--PGELHDGSPSCMDYTKSRNN 456
Query: 170 RFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
RF N + A KNRIQ PS++LHFFNA P+ T + + +
Sbjct: 457 RFRNKEAASKNRIQQPSKVLHFFNAHPESTPQTIKQV 493
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSM 55
P L VYKND E++DYT P L G LL +PP P +GP +M
Sbjct: 232 PKTLTVYKNDGETYDYTNPGLNAAAQGR-----ALLDDPPE--PAYNGPTTM 276
>gi|2760632|dbj|BAA24237.1| protein L [Mus musculus]
Length = 199
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G+++ V
Sbjct: 7 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNV 61
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 62 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 120
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 121 EVTEENFFEI 130
>gi|357380735|pdb|3TYT|A Chain A, Crystal Structure Of A Heterogeneous Nuclear
Ribonucleoprotein L (Hnrpl) From Mus Musculus At 1.60 A
Resolution
Length = 205
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
+R +N L + K + M P G MV+M D + +RA+ +L+ + G+++ V
Sbjct: 20 DRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNV 74
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ + Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP
Sbjct: 75 CVSKQPAIMP-GQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPL 133
Query: 197 DITEEQLTDI 206
++TEE +I
Sbjct: 134 EVTEENFFEI 143
>gi|313228979|emb|CBY18131.1| unnamed protein product [Oikopleura dioica]
Length = 409
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 41/237 (17%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPG--PLLPE-PPRRLPTPSGPPSMP----NY 58
KLNVYKND +WDY+ + G+ + P G P++P P S PP +P N
Sbjct: 116 KLNVYKNDDTTWDYSVSSQGQVQKKPCGLLGDRPIIPNGAPFNAERESVPPQVPFPVYND 175
Query: 59 RGGYP--------DDD--------------------YYGAPPAFEFERSYNSPVLDKFIG 90
GYP D YG +R +N + +
Sbjct: 176 AHGYPPPRGMAPVDTQGFNQGFERYPQEVCTTSVVMVYGVDDNMNCQRLFNLLCVYGNVL 235
Query: 91 KPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHP 150
K + + + MVQ+GD + +R L+ + L L +A SKQ+ L D S
Sbjct: 236 KVKFLRSKNNTA----MVQLGDPQAVDRCCQLLTGSRLFEN-LLTLAPSKQLHLVDTSSA 290
Query: 151 -YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
++L DGS SF DF+ SR +RF + KMA NR Q P++ LH++NAP + E + +I
Sbjct: 291 IFDLNDGSPSFADFSSSRNHRFTSQKMAAMNRTQKPNKSLHYYNAPMEFAENDIQEI 347
>gi|432843758|ref|XP_004065651.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 582
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 44/240 (18%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR---TKDGPPSRPGPLLPEPPRRLPTPSGP----PSMP 56
P +LNV +ND+ SWDYT+P L K G + +L E P P P P+
Sbjct: 281 PNRLNVVRNDNTSWDYTKPFLLHRDVVKRGKGRQRQAILGEHPSNGYGPHCPLLTLPTNS 340
Query: 57 NYRGGYPD-DDYYGAPPAF-----------------------------EFERSYNSPVLD 86
YR D PP R +N L
Sbjct: 341 RYRRSSEQVQDMISYPPLLPKTFPSTSSSSLLGSSSVAMVSGLHPSKMNCSRIFNLFCLY 400
Query: 87 KFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSD 146
+ K + M P G +V+MGD + +RA+ +L+ + GK+L V SKQ +
Sbjct: 401 GNVEKVKFMKSVP----GTALVEMGDEYAVDRAVTHLNGIKV-FGKKLNVCVSKQQAVIP 455
Query: 147 VSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +EL D S S++DF+ +R NRF + + +N IQPP+ +LHF+N PP +T+ QL +
Sbjct: 456 -SQVFELADCSSSYQDFSLTRNNRFSSAHSS-RNIIQPPAAVLHFYNGPPTLTQHQLLKL 513
>gi|344236923|gb|EGV93026.1| Ras and Rab interactor-like protein [Cricetulus griseus]
Length = 651
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G MV+M D + +RA+ +L+ + G+++ V SKQ + Y L DGS S+KDF
Sbjct: 472 GAAMVEMADGYAVDRAITHLNNNFMF-GQKMNVCVSKQPAIMP-GQSYGLEDGSCSYKDF 529
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 530 SESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 572
>gi|405972820|gb|EKC37568.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 370
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
EG MVQMGD ++ +R M NL+ L + K + + +SKQ FL DV +PYELPDG+ SFKD
Sbjct: 220 EGSAMVQMGDAMAVDRCMQNLNYMTLFDNK-ITLGHSKQAFLQDVPNPYELPDGTPSFKD 278
Query: 163 FTGSRKNRFMNPKMAMKNRI 182
+ GSR NR+ NP+ A KN I
Sbjct: 279 YMGSRNNRYANPEAASKNHI 298
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEP 42
+ PT+LNV++ND+ESWDYTQ + KD R GPLL +P
Sbjct: 48 AKPTRLNVFRNDNESWDYTQSS--PEKDPANQRNGPLLADP 86
>gi|344237410|gb|EGV93513.1| Heterogeneous nuclear ribonucleoprotein L-like [Cricetulus griseus]
Length = 237
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 8/130 (6%)
Query: 78 RSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVA 137
R +N L I K + M P G +V+MGD + ERA+ +L+ L GKRL V
Sbjct: 46 RVFNLFCLYGNIEKVKFMKTIP----GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVC 100
Query: 138 YSKQVFLSDV-SHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP 196
SKQ S V S +EL DG+ S+KDF S+ NRF + A KN IQPPS +LH++N P
Sbjct: 101 VSKQ--HSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPL 158
Query: 197 DITEEQLTDI 206
+TEE T +
Sbjct: 159 CVTEETFTKL 168
>gi|312074919|ref|XP_003140185.1| hypothetical protein LOAG_04600 [Loa loa]
Length = 355
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
M QMG + NL T++ G +LA+ SKQ L ++ P+ LPDG+ S++D+T
Sbjct: 183 AMAQMGSVRQVYTTIDNLHGTIIF-GNKLALRPSKQQILHEIRDPFILPDGTPSYRDYTN 241
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
SR R+ P++A +NRI P+ +LH++NAP +TEE+L D+
Sbjct: 242 SRNQRYTTPELAARNRIVKPTHVLHWYNAPVTMTEEKLKDL 282
>gi|393907053|gb|EJD74501.1| serologically defined colon cancer antigen 1 [Loa loa]
Length = 1568
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M QMG + NL T++ G +LA+ SKQ L ++ P+ LPDG+ S++D+T S
Sbjct: 1397 MAQMGSVRQVYTTIDNLHGTIIF-GNKLALRPSKQQILHEIRDPFILPDGTPSYRDYTNS 1455
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R R+ P++A +NRI P+ +LH++NAP +TEE+L D+
Sbjct: 1456 RNQRYTTPELAARNRIVKPTHVLHWYNAPVTMTEEKLKDL 1495
>gi|198417515|ref|XP_002126298.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein L
[Ciona intestinalis]
Length = 293
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 71 PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCN 130
P +R +N L + K + + P G MVQMGD + RA+ NLS +
Sbjct: 92 PEKMTCDRVFNILCLYGNVMKVKFLKSKP----GTAMVQMGDPSAVGRAISNLSGMKFFD 147
Query: 131 GKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLH 190
++L +A SKQ++L+D +LP+G+ + DF SR NRF + A KNRIQ P+++LH
Sbjct: 148 -EKLVLAPSKQLYLTDTGPVGDLPNGTPAQVDFGNSRNNRFQTNEQAAKNRIQNPAKVLH 206
Query: 191 FFNAPPDITEEQLTDISGRTD 211
++NAP ++ EE++ +I D
Sbjct: 207 YYNAPLELNEEKMKEICQEFD 227
>gi|148706552|gb|EDL38499.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c [Mus
musculus]
Length = 175
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKD 162
G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KD
Sbjct: 6 GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKD 62
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
F S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 63 FAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLCN 108
>gi|301758080|ref|XP_002914884.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Ailuropoda melanoleuca]
Length = 175
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDV-SHPYELPDGSESFKD 162
G +V+MGD + ERA+ +L+ L GKRL V SKQ S V S +EL DG+ S+KD
Sbjct: 6 GTALVEMGDEYAVERAVTHLNNVKL-FGKRLNVCVSKQ--HSVVPSQIFELEDGTSSYKD 62
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
F S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 63 FAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLCN 108
>gi|291224827|ref|XP_002732404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Saccoglossus kowalevskii]
Length = 423
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 71 PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCN 130
P ++ +N L + K + M P GC MVQMGD L+ ERA+ NL+ ++
Sbjct: 311 PEKLNCDKLFNVLCLYGSVLKIKFMKSKP----GCAMVQMGDALAVERAITNLNNVVVFE 366
Query: 131 GKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRI 182
K++ + +SKQ++++D P +LPDG+ FKDF+ SR NRF +P+ A KN I
Sbjct: 367 -KKMQLGFSKQMYIADQMQPSDLPDGTTCFKDFSQSRNNRFSSPEAASKNHI 417
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEP 42
PT+LNVYKND+E++DYT PTLG G + LL EP
Sbjct: 165 PTRLNVYKNDNETYDYTNPTLGT---GAKEKGNALLEEP 200
>gi|156368306|ref|XP_001627636.1| predicted protein [Nematostella vectensis]
gi|156214551|gb|EDO35536.1| predicted protein [Nematostella vectensis]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 8/136 (5%)
Query: 77 ERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAV 136
ER +N L + K + ++ P G CMVQM D +++E + NLS + + K + +
Sbjct: 15 ERIFNLFCLYGNVIKVKFLTNKP----GACMVQMSDKIASEMIIRNLSGATIFDNK-INI 69
Query: 137 AYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRI---QPPSQLLHFFN 193
+SK F++D S LPD S S +F +R NRF M + + QPP+++LHFFN
Sbjct: 70 MFSKHPFIADSSVVTALPDSSPSAMNFADNRNNRFKYDNMPFLDSVVGYQPPTRMLHFFN 129
Query: 194 APPDITEEQLTDISGR 209
APP+ T +QL D+S +
Sbjct: 130 APPNCTVDQLRDVSTK 145
>gi|402594034|gb|EJW87961.1| hypothetical protein WUBG_01127 [Wuchereria bancrofti]
Length = 608
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M Q+G + NL T++ G +LA+ SKQ L ++ P+ LPDG+ S++D+T S
Sbjct: 437 MAQLGSVRQVYTTIDNLHGTMIF-GNKLALRPSKQQILHEIRDPFILPDGTPSYRDYTNS 495
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R R+ P++A +NRI P+ +LH++NAP +TEE+L ++
Sbjct: 496 RNQRYTTPELAARNRIVKPTHVLHWYNAPVTMTEEKLKEL 535
>gi|170582500|ref|XP_001896157.1| hypothetical protein [Brugia malayi]
gi|158596690|gb|EDP34992.1| conserved hypothetical protein [Brugia malayi]
Length = 370
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M Q+G + NL T++ G +LA+ SKQ L ++ P+ LPDG+ S++D+T S
Sbjct: 199 MAQLGSVRQVYTTIDNLHGTMIF-GNKLALRPSKQQILHEIRDPFILPDGTPSYRDYTNS 257
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R R+ P++A +NRI P+ +LH++NAP +TEE+L ++
Sbjct: 258 RNQRYTTPELAARNRIVKPTHVLHWYNAPVTMTEEKLKEL 297
>gi|170576159|ref|XP_001893522.1| RNA binding protein [Brugia malayi]
gi|158600425|gb|EDP37644.1| RNA binding protein, putative [Brugia malayi]
Length = 659
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M Q+G + NL T++ G +LA+ SKQ L ++ P+ LPDG+ S++D+T S
Sbjct: 488 MAQLGSVRQVYTTIDNLHGTMIF-GNKLALRPSKQQILHEIRDPFILPDGTPSYRDYTNS 546
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R R+ P++A +NRI P+ +LH++NAP +TEE+L ++
Sbjct: 547 RNQRYTTPELAARNRIVKPTHVLHWYNAPVTMTEEKLKEL 586
>gi|410931079|ref|XP_003978923.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Takifugu rubripes]
Length = 337
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 112/279 (40%), Gaps = 79/279 (28%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPR--------------------- 44
+LNV KND+ESWDYT+P L R G + +L E P
Sbjct: 1 RLNVIKNDNESWDYTKPYLVRRDRGKGRQRQAILGEHPSSYSENGYGPPCPLLPLPSNTR 60
Query: 45 -RLPTPSGPPSMPNYRGGYPDDDYYGAPPA------------FEFERSYNSPVLDKFIGK 91
+L + P + Y G P+ R +N L I K
Sbjct: 61 YKLASLDVPDMVSYPPPQSSSYSYSGHIPSSVAMVSGLHPSKMNCTRIFNLFCLYGNIEK 120
Query: 92 PRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKR------------------ 133
+ M P G +V+MGD + +RA+ +L+ ++ GKR
Sbjct: 121 VKFMKSVP----GTALVEMGDEYAVDRAITHLN-SIKVFGKRCPAPSEASCMVSCEQMPP 175
Query: 134 -------------LAVA--------YSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFM 172
L++A SKQ + S +EL DGS S+KDF +R NRF
Sbjct: 176 SPDMNRQLTFRHGLSMASGLVMGGLVSKQHAVIP-SQVFELDDGSSSYKDFAMTRNNRFS 234
Query: 173 NPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRTD 211
+ A KN IQPPS +LH++N PP I++EQL + D
Sbjct: 235 SAGQASKNIIQPPSAVLHYYNVPPCISQEQLLRLCTEHD 273
>gi|340708199|pdb|3S01|A Chain A, Crystal Structure Of A Heterogeneous Nuclear
Ribonucleoprotein L (Hnrpl) From Mus Musculus At 2.15 A
Resolution
Length = 212
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G V+ D + +RA+ +L+ G++ V SKQ + Y L DGS S+KDF
Sbjct: 43 GAAXVEXADGYAVDRAITHLNNNFXF-GQKXNVCVSKQPAIXP-GQSYGLEDGSCSYKDF 100
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 101 SESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 143
>gi|392339204|ref|XP_003753752.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Rattus norvegicus]
Length = 609
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 74/265 (27%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD-----GPPSRPGPLLPEPPRRLPTPSGPPSMP 56
+ PT+LNV KN+ ++WDYT P L D R PLL + P P G
Sbjct: 290 AKPTRLNVSKNNQDTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHG----- 344
Query: 57 NYRGGYPDDDYYGAPPAFEFER---------------------------------SYNSP 83
Y Y D+ Y PP +E R +SP
Sbjct: 345 GYHSHYHDEGY-XPPPHYEGRRMGPPVGGHRRGPSRYGPXYGHPSPPPPPPDYGPHADSP 403
Query: 84 VLDKF---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGN 122
VL + + K + M P G MV+M D + +RA+ +
Sbjct: 404 VLIVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITH 459
Query: 123 LSKTLLCNGKRLAVAYSKQ-VFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNR 181
L+ + G+++ V SKQ + S+ E S S+K F+ SR +R P+ A KN
Sbjct: 460 LNNNFMF-GQKMNVCVSKQPAIMPGQSYGLER---SCSYKHFSESRNSRLSTPEQAAKNH 515
Query: 182 IQPPSQLLHFFNAPPDITEEQLTDI 206
IQ PS +LHFF++ ++T+ + +I
Sbjct: 516 IQHPSNVLHFFSSTLEVTQXKFFEI 540
>gi|392346115|ref|XP_003749467.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like, partial [Rattus norvegicus]
Length = 582
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 74/265 (27%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD-----GPPSRPGPLLPEPPRRLPTPSGPPSMP 56
+ PT+LNV KN+ ++WDYT P L D R PLL + P P G
Sbjct: 263 AKPTRLNVSKNNQDTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHG----- 317
Query: 57 NYRGGYPDDDYYGAPPAFEFER---------------------------------SYNSP 83
Y Y D+ Y PP +E R +SP
Sbjct: 318 GYHSHYHDEGY-XPPPHYEGRRMGPPVGGHRRGPSRYGPXYGHPSPPPPPPDYGPHADSP 376
Query: 84 VLDKF---------------------IGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGN 122
VL + + K + M P G MV+M D + +RA+ +
Sbjct: 377 VLIVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKP----GAAMVEMADGYAVDRAITH 432
Query: 123 LSKTLLCNGKRLAVAYSKQ-VFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNR 181
L+ + G+++ V SKQ + S+ E S S+K F+ SR +R P+ A KN
Sbjct: 433 LNNNFMF-GQKMNVCVSKQPAIMPGQSYGLER---SCSYKHFSESRNSRLSTPEQAAKNH 488
Query: 182 IQPPSQLLHFFNAPPDITEEQLTDI 206
IQ PS +LHFF++ ++T+ + +I
Sbjct: 489 IQHPSNVLHFFSSTLEVTQXKFFEI 513
>gi|268530642|ref|XP_002630447.1| Hypothetical protein CBG11180 [Caenorhabditis briggsae]
Length = 604
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+++MG + + +L T LC G +L S Q + + P+ LPDG+ SFKD+T S
Sbjct: 353 IIEMGQPNQRQDVLDHLQGTELC-GLKLEFKPSHQECVHYLREPFLLPDGTPSFKDYTSS 411
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF +++MKNRI P+++LH+FNAP + E +L D+
Sbjct: 412 RNQRFTTEELSMKNRIVFPTKVLHWFNAPGTMDEAKLLDM 451
>gi|324504331|gb|ADY41870.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 536
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGP-------- 52
+ P +NV N S WDYT D P + L P+ P
Sbjct: 235 FAKPDHVNVTANTSMQWDYTTGLTPGFIDYPHTIQQSLAAASKGTFSLPTQPGVAHYGMA 294
Query: 53 PSMPNYRGGYPDDD----YYGA-PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCM 107
P + N G D +GA +F ++ +N L + + M P+ CM
Sbjct: 295 PCLNNTNSGLARDGCVVVIHGAHQSSFSCDKIFNLLCLYGNCYRIKFMKSKPN----VCM 350
Query: 108 VQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSR 167
VQMG A + NL+ L G L++ + ++ P LPDGS S++D++ SR
Sbjct: 351 VQMGSASEACAVVENLNGVTL-FGYTLSLRQCSYDVIHEIPEPLPLPDGSPSYRDYSSSR 409
Query: 168 KNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF + A +N+I P L++FNAP I+EE + +
Sbjct: 410 NHRFTSAARAGRNKIVKPGPALYWFNAPSTISEETMKQL 448
>gi|324510343|gb|ADY44324.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 400
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGP-------- 52
+ P +NV N S WDYT D P + L P+ P
Sbjct: 101 FAKPDHVNVTANTSMQWDYTTGLTPGFIDYPHTIQQSLAAASKGTFSLPTQPGVAHYGMA 160
Query: 53 PSMPNYRGGYPDDD----YYGA-PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCM 107
P + N G D +GA +F ++ +N L + + M P+ CM
Sbjct: 161 PCLNNTNSGLARDGCVVVIHGAHQSSFSCDKIFNLLCLYGNCYRIKFMKSKPN----VCM 216
Query: 108 VQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSR 167
VQMG A + NL+ L G L++ + ++ P LPDGS S++D++ SR
Sbjct: 217 VQMGSASEACAVVENLNGVTL-FGYTLSLRQCSYDVIHEIPEPLPLPDGSPSYRDYSSSR 275
Query: 168 KNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF + A +N+I P L++FNAP I+EE + +
Sbjct: 276 NHRFTSAARAGRNKIVKPGPALYWFNAPSTISEETMKQL 314
>gi|449687307|ref|XP_002155274.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Hydra
magnipapillata]
Length = 759
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G M+Q D +S + ++ NL+ L G++ +++SK F++D S L DGS S +
Sbjct: 524 GSAMIQYTDKVSTDISIRNLNNLTLF-GQKFQLSFSKHPFIADSSQVTPLFDGSPSAVSY 582
Query: 164 TGSRKNRF--MNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
SR NRF + + + +RI PPS++LH+FNAPPD TE+QL +
Sbjct: 583 ADSRNNRFKFIPGGVDVFSRIHPPSKVLHYFNAPPDCTEDQLNKV 627
>gi|9885344|gb|AAG01405.1|AF260436_1 heterogeneous nuclear ribonucleoprotein hnRNP-L [Rattus norvegicus]
Length = 140
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 151 YELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
Y L DGS S+KDF+ SR NRF P+ A KNRIQ PS +LHFFNAP ++TEE +I
Sbjct: 16 YGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEI 71
>gi|358256151|dbj|GAA57676.1| heterogeneous nuclear ribonucleoprotein L, partial [Clonorchis
sinensis]
Length = 196
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
+G MV+MGD S +R M NLS L G +L + SKQ + + + P++L DGS SF+D
Sbjct: 21 QGTAMVEMGDPESVDRLMDNLSGYTLM-GSQLVIRRSKQNEVLNNTLPHKLFDGSPSFQD 79
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAP 195
F+ SR NR+ A KNR+ PS LH++N P
Sbjct: 80 FSSSRNNRYTTMASASKNRLFKPSSTLHYWNCP 112
>gi|308502740|ref|XP_003113554.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
gi|308263513|gb|EFP07466.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
Length = 602
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+++MG T + + + C G +L S Q + + P++LPDG+ SFKD++ S
Sbjct: 354 IIEMG-TPDERHNVLDFLQGFECFGLKLEFKPSHQECVHYLRDPFQLPDGTPSFKDYSTS 412
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF P++A KNRI P+++LH+FNAP + E++L D+
Sbjct: 413 RNQRFTTPELAAKNRIIFPTKILHWFNAPGTMDEKKLLDM 452
>gi|341903711|gb|EGT59646.1| hypothetical protein CAEBREN_28309 [Caenorhabditis brenneri]
Length = 488
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M++MG T + + + G +L S Q + + P+ LPDGS SFKD+T S
Sbjct: 239 MIEMG-TPDERHNVLDFLQGFSIFGLKLEFKPSHQECVHFLRDPFLLPDGSPSFKDYTSS 297
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF P++A KNRI P+ +LH+FNAP + E L D+
Sbjct: 298 RNQRFTTPELASKNRIIFPTHVLHWFNAPGTMDENALLDL 337
>gi|341890178|gb|EGT46113.1| hypothetical protein CAEBREN_06779 [Caenorhabditis brenneri]
Length = 601
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
M++MG T + + + G +L S Q + + P+ LPDGS SFKD+T S
Sbjct: 352 MIEMG-TPDERHNVLDFLQGFSIFGLKLEFKPSHQECVHFLRDPFLLPDGSPSFKDYTSS 410
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF P++A KNRI P+ +LH+FNAP + E L D+
Sbjct: 411 RNQRFTTPELASKNRIIFPTHVLHWFNAPGTMDENALLDL 450
>gi|71983992|ref|NP_495411.2| Protein C44B7.2, isoform a [Caenorhabditis elegans]
gi|351065573|emb|CCD61555.1| Protein C44B7.2, isoform a [Caenorhabditis elegans]
Length = 597
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++++G + + L + L G L S Q + + P+ LPDGS SFKD++ S
Sbjct: 349 IIELGTPEERQNVLDFLQGSALF-GLTLEFKPSHQECVHHLRDPFLLPDGSPSFKDYSSS 407
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
R RF P++A KNRI P+ LH+FNAP + E+ L D+
Sbjct: 408 RNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDL 447
>gi|7497376|pir||T15805 hypothetical protein C44B7.2 - Caenorhabditis elegans
Length = 493
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 139 SKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDI 198
S Q + + P+ LPDGS SFKD++ SR RF P++A KNRI P+ LH+FNAP +
Sbjct: 363 SHQECVHHLRDPFLLPDGSPSFKDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTM 422
Query: 199 TEEQLTDI 206
E+ L D+
Sbjct: 423 DEQALLDL 430
>gi|330789887|ref|XP_003283030.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
gi|325087102|gb|EGC40483.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
Length = 488
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 5 TKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGGYPD 64
+KLNV +ND ++ DYT P + P + P G + G
Sbjct: 214 SKLNVKQNDEKTADYTTPDFYSQQ--LIQSPQGMQMYHHAAGSNPFGASHGAGFINGGGP 271
Query: 65 DDYYGAP---PAFEFERSYNSPVL-----------DKF---------IGKPRGMSGPPSG 101
Y GAP PA S N PV+ DK + K + +
Sbjct: 272 QQYGGAPYMYPAVGNPESVNQPVISVSKIPEDIDTDKLFNLFCLYGNVIKIKMLHNS--- 328
Query: 102 PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
+G MVQMGD++ AE A+ L+ + + G+++ ++K F+ D SE K
Sbjct: 329 -KGSAMVQMGDSIQAEIAVQCLNHSFIY-GQKINCYHTKHPFIVD----------SEKTK 376
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGR 209
D++ S NRF+N + KN +P S LHF N P +E+QL+D+ +
Sbjct: 377 DYSKSTLNRFLNSQPYGKNAYKPSST-LHFLNVPLHYSEKQLSDVFAK 423
>gi|328722647|ref|XP_003247624.1| PREDICTED: hypothetical protein LOC100571280 [Acyrthosiphon pisum]
Length = 487
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+V++ D +A R + NL L + + V YSK F+ D + +L DG+ + K + S
Sbjct: 129 LVELEDAEAARRCVSNLHMLQLDDEVHMKVKYSKHNFIHDQVNFNKLADGTPAQKVYLSS 188
Query: 167 RKNRFM-NPKMAMKNRIQPPSQLLHFFNAPPDI----TEEQLTDISGRTD 211
NRF+ N K RI PS++LHFFNAP D+ + ++D RTD
Sbjct: 189 TLNRFIPNVLSPDKRRIAAPSKILHFFNAPTDVCGIAVHKAVSDALCRTD 238
>gi|328875343|gb|EGG23708.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 404
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 7 LNVYKNDSESWDYT--QPTLGRTKDGPPSRPGPLLPEPPRRLPT---PSGPPSMPNYRGG 61
LNV +ND +++DYT P P +PG P + PT P+GP M +
Sbjct: 130 LNVKQNDDKTYDYTSEHPGFSLPSYSPFPQPGAPGVHPAQLDPTYAKPAGPYMMMGQQAA 189
Query: 62 Y-----PDDDYYGAPPAFEFE-------------------RSYNSPVLDKFIGKPRGMSG 97
P Y AP A E + +N L + K + + G
Sbjct: 190 TTMGIPPYGMYSAAPGAMGIEPPSQTVIMVHRLADSVTSDQLFNLFCLYGNVIKIKMLQG 249
Query: 98 PPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGS 157
SG MVQMGD + A+ A+ L+ + G+RL+V +SK +S+ S
Sbjct: 250 AKSG----AMVQMGDGIQADTAIHCLNGASIF-GQRLSVFHSKHPAISE----------S 294
Query: 158 ESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ KDFT S NRF + I PS L+F N P TE+ LT +
Sbjct: 295 DKTKDFTDSPLNRFTKGGLGSYKNIYKPSATLYFINVPTSFTEKDLTHL 343
>gi|320165836|gb|EFW42735.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 455
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++Q +A+ A+ NL++ ++ G L V +S+ +++ + +P + DF+
Sbjct: 336 AALLQFDQAHAADTALANLNRAVIF-GTSLEVTHSRNTYIAGAA-TAPIPGSPATLVDFS 393
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S NRF N + AMKNRI PP++ +HFF TEE + I
Sbjct: 394 DSPHNRFTNQRAAMKNRISPPTRNVHFFGLGVGATEEHIRSI 435
>gi|358256069|dbj|GAA57625.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 739
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
GC MVQ+G+ +A+ + + G + +SKQ L + + L DGS K++
Sbjct: 454 GCAMVQVGNAEAAD-FIHRYYNGISVFGHTIRFYHSKQPQLVEHDNLGTLDDGSPVMKNY 512
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF N +A K+RI PS+ LHFFNAP +I+ E + +
Sbjct: 513 MMDPNNRFRNAVVASKSRILEPSRTLHFFNAPLNISPEDMCRV 555
>gi|350034148|dbj|GAA34297.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 735
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 104 GCCMVQMGDTLSAERAMGNLS-KTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
G MVQ+G +AE + +T+ G ++ + SKQ L + + L DGS K+
Sbjct: 474 GSAMVQLGTAEAAEFVHQYYNGRTVF--GHKIRFSSSKQPQLVEYPNLGTLDDGSPVMKN 531
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+ NRF NP +A K+RI PS+ LHFFN P +I+ + + I
Sbjct: 532 YIDDPNNRFRNPAIAAKSRITAPSRTLHFFNLPLNISLQDVCRI 575
>gi|66816231|ref|XP_642125.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470245|gb|EAL68225.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 530
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
+G MVQMGD++ AE A+ L+++ + G+++ V ++K Y+ SE +D
Sbjct: 358 KGSAMVQMGDSVQAEIAIQCLNQSSVY-GQKIGVFHTK----------YQYIVESEKTRD 406
Query: 163 FTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
++ S NRF+N + KN +P S LHF N P + TE+QL D
Sbjct: 407 YSKSTLNRFLNNQPYGKNAYKP-SPTLHFLNVPLNFTEKQLID 448
>gi|146197802|dbj|BAF57617.1| hnRNP L protein [Dugesia japonica]
Length = 537
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 89/248 (35%), Gaps = 57/248 (22%)
Query: 9 VYKNDSESWDYTQPTLGR-TKDGPPSR-------------PGPLLPEPPRRLPTPSGPPS 54
V+KND ESWD+++ + + PPS P L P P P
Sbjct: 78 VFKNDDESWDFSKSQVKQGILKVPPSNGSVSSNNVNVFTPTNPQLYSPVYNFPPPMSYNH 137
Query: 55 MP----------NYRGGYPDDD-------------------------YYGAPPAFEFERS 79
MP N YP Y P +
Sbjct: 138 MPVPPIHGFPCHNLIYNYPSIQKNSKSKSKLDINKDAFVVEIGVVFMVYNLPFNICVDHL 197
Query: 80 YNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLS-KTLLCNGKRLAVAY 138
+N L + K + + P G MVQMG + E + + KTL L
Sbjct: 198 FNLFCLYGNVNKIKFTNQP-----GTAMVQMGSKAAVETCIQYYNNKTLFGQEMHLMKCN 252
Query: 139 SKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDI 198
++F S + LP+G+ FKDF+ NRF+N N+I P++ LHFFNAP
Sbjct: 253 KPEIFPS--KNIEFLPNGTPVFKDFSADANNRFLNDHGINSNKILEPNRTLHFFNAPYTF 310
Query: 199 TEEQLTDI 206
E L ++
Sbjct: 311 AEIDLNNM 318
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A AM +L L G L V SK S V P E D +DF+
Sbjct: 342 ALIQMNDNTQAHVAMKHLHGVKLF-GNSLQVVTSKH---SQVQMPREGQDIGNLTQDFSN 397
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS++LH N P D+TEE L D
Sbjct: 398 SPLHRFKKPGSKNFQNIYPPSEVLHLSNIPNDVTEEFLKD 437
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A AM +L L G L V SK S V P E D +DF+
Sbjct: 375 ALIQMNDNTQAHVAMKHLHGVKLF-GNSLQVVTSKH---SQVQMPREGQDIGNLTQDFSN 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS++LH N P D+TEE L D
Sbjct: 431 SPLHRFKKPGSKNFQNIYPPSEVLHLSNIPNDVTEEFLKD 470
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 89/234 (38%), Gaps = 36/234 (15%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRP---GPLLPEPPRRLPTPSGPPSMPNY 58
S LNV N+ +S DYT+P L PP P L + P L TPSG + +
Sbjct: 249 SKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSMAAALSKDSPSLLGTPSGMVTSYSS 308
Query: 59 RGGYPDD----------------------DYYGAPPAFEFERSYNSPVLD-KFIGKPRGM 95
GG+P + P + N ++ + + G+
Sbjct: 309 GGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSVPGGVLLVSNLNDEMVTPQSLFTLFGV 368
Query: 96 SGPPS------GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH 149
G + ++QM D A+ AM +L+ + GK + V SK V
Sbjct: 369 YGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMY-GKIIRVTLSKH---QTVQL 424
Query: 150 PYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
P E D KDFT S +RF P I PPS LH N P ++TEE L
Sbjct: 425 PREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDL 478
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++QM D A+ AM +L+ + GK + VA SK + V P + D KDFT
Sbjct: 366 SALIQMADASQAQLAMSHLNGQKMY-GKVIRVALSKH---TSVQLPRDGLDDQGLTKDFT 421
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P D+TEE L
Sbjct: 422 NSPLHRFKKPGSKNFQNIFPPSTTLHLSNIPTDVTEEDL 460
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPY-ELPDGSES------ 159
+VQM D A+ AM +L NG+RL +V LS HP +LP G
Sbjct: 414 LVQMSDATQAQLAMSHL------NGQRLH-GNVIRVMLSK--HPVVQLPRGGAGQEEQAL 464
Query: 160 FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
+DF+GS +RF P N I PPS LH N P ++EE L D+ T
Sbjct: 465 TRDFSGSSLHRFKKPGSKNFNNIFPPSATLHLSNIPSSVSEEDLKDLFSST 515
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPY-ELPDGSES----- 159
+VQM D A+ AM +L NG+RL + + ++ HP +LP G
Sbjct: 358 ALVQMSDATQAQLAMSHL------NGQRL---HGNVIRVTLSKHPVVQLPRGGAGQEEQA 408
Query: 160 -FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+DF+GS +RF P N I PPS LH N P ++EE L D+
Sbjct: 409 LTRDFSGSALHRFKKPGSKNFNNIFPPSATLHLSNIPSSVSEEALKDL 456
>gi|256071583|ref|XP_002572119.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645120|emb|CCD60181.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 710
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G MVQ+G+ + + S + G+ + +SK L + + L DGS K++
Sbjct: 444 GYAMVQVGNPETGDLIHRYFSGVCVF-GQVIQFHHSKITELKEHENLGTLADGSPVMKNY 502
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF N +A K+RI PS+ LHFFNAP + + + + +
Sbjct: 503 MTDPNNRFRNSMVAAKSRILEPSRTLHFFNAPLNFSPDDICRV 545
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPY-ELPDGSES----- 159
+VQM D A+ AM +L NG+RL +V LS HP +LP G
Sbjct: 325 ALVQMSDATQAQLAMSHL------NGQRLH-GNVIRVMLSK--HPVVQLPRGGAGQEEQV 375
Query: 160 -FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+DF+GS +RF P N I PPS LH N P ++EE L D+
Sbjct: 376 LTRDFSGSALHRFKKPGSKNFNNIFPPSATLHLSNIPSSVSEEDLKDL 423
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFTG 165
+VQM + A+ A+ +L K + GK + V SK V P E PD + KDFT
Sbjct: 612 LVQMAEPHQAQLAIAHLDKVKVW-GKNIRVTQSKHTL---VQMPKEGQPDAGLT-KDFTN 666
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS +LH N PP+I E+ L+D
Sbjct: 667 SPLHRFKRPGSKNCQNIFPPSAVLHLSNIPPNIEEDFLSD 706
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++Q D A + ++ K L GK + VA SK S V P E PD + KD+T
Sbjct: 340 ALIQFADAAQASCCLTHMDK-LKVWGKNIKVAPSKH---SVVQMPKEGQPDAGLT-KDYT 394
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P + I PPS LH N PP TEEQL D+
Sbjct: 395 NSPLHRFKKPNSKNHHNIFPPSATLHLSNIPPTTTEEQLQDL 436
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH-PYELP-DGSES---F 160
++QM D A+ AM +L NG+RL Y K + ++ H +LP +G E
Sbjct: 368 ALIQMADATQAQLAMSHL------NGQRL---YGKVIRVTISKHQTVQLPREGQEDQGLT 418
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
KDF+GS +RF P I PPS LH N PP T++ L D+
Sbjct: 419 KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDL 464
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +G+ L V+ SK + V P E + KD+
Sbjct: 420 ALVQMADGTQAQLAMSHLNGVRL-HGRSLRVSMSKH---TTVQLPREGHEDQGLTKDYAT 475
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P N I PPS LH N PP + EE L
Sbjct: 476 SPLHRFKKPGSKNYNNIYPPSGTLHLSNIPPAVGEEDL 513
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 846 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 901
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 902 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 942
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +G+ L V+ SK + V P E + KD+
Sbjct: 420 ALVQMADGTQAQLAMSHLNGVRL-HGRSLRVSMSKH---TTVQLPREGHEDQGLTKDYAT 475
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P N I PPS LH N PP + EE L
Sbjct: 476 SPLHRFKKPGSKNYNNIYPPSGTLHLSNIPPAVGEEDL 513
>gi|56756296|gb|AAW26321.1| SJCHGC09002 protein [Schistosoma japonicum]
Length = 408
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDF 163
G +VQ+G+ + + + + G+ + +SK L + + L DGS K++
Sbjct: 141 GYALVQVGNPETGD-LIHRYFNGVCVFGQVIQFHHSKVTELKEHENLGTLSDGSPIMKNY 199
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF N +A K+RI PS+ LHFFNAP + + + + +
Sbjct: 200 MTDPNNRFRNQMVAAKSRILEPSRTLHFFNAPLNFSPDDICRV 242
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ + GK + V SK V P E D KDFT
Sbjct: 387 ALIQMSDGNQAQLAMSHLNGQKMY-GKIIRVTLSKH---QAVQLPREGLDDQGLTKDFTN 442
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P D+TEE L
Sbjct: 443 SPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEEDL 480
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++QM D A A+ +L+ +L + K + V +SK V P + + KDFT +
Sbjct: 630 LLQMADNHQATTALTHLNSRVL-HDKPIRVVFSKH---QQVQLPKDNHEACVLTKDFTNN 685
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF P I PPS+ LH N PP+I E+++ ++
Sbjct: 686 SLHRFKKPGSKNFQNIHPPSETLHLSNIPPEIEEDRIREL 725
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 706 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 761
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 762 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 802
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 385 ALVQMADAHQAQLAMNHLSGQRLY-GKVLRATLSKH---QTVQLPREGQEDQGLTKDFSN 440
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L +I
Sbjct: 441 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNI 481
>gi|281205212|gb|EFA79405.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 437
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 91/233 (39%), Gaps = 51/233 (21%)
Query: 6 KLNVYKNDSESWDYTQPTL-------GRTKDGPPSRPGPLLPEPPRR------------- 45
KLNV ND ++ DYT + G T G P P + P +
Sbjct: 178 KLNVKVNDEKTTDYTMDLIQPPGAPIGMTAHGYPFAPAHMDPTGFTKQSAYMMNPSAAAA 237
Query: 46 ---LPTPSGPPSMPNYRGGYPDD-------DYYGAPPAFEFERSYNSPVLDKFIGKPRGM 95
P P + G YP + + P ++ +N L + K + +
Sbjct: 238 APHPSAVGVQPHHPGFMG-YPMEPMTQSVIMVHKLPENITADQLFNIFCLYGTVLKIKML 296
Query: 96 SGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCN--GKRLAVAYSKQVFLSDVSHPYEL 153
SG MVQM D + A+ A+ L+ L N G+++ V +S+ ++D
Sbjct: 297 HNTKSG----AMVQMADGIQADSAIHCLN---LANIFGQKIQVFHSRHPSIAD------- 342
Query: 154 PDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
SE KD++ S NRF KN I PS LHF N P TE+ LT +
Sbjct: 343 ---SEKTKDYSESPLNRFKAGLGTYKN-IYKPSATLHFLNVPMTFTEKDLTHL 391
>gi|397485367|ref|XP_003813820.1| PREDICTED: polypyrimidine tract-binding protein 1 [Pan paniscus]
Length = 783
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+ S
Sbjct: 630 LVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGNS 685
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
+RF P I PPS LH N PP ++EE L
Sbjct: 686 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 722
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 534 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QTVQLPREGQEDQGLTKDFSN 589
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 590 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 630
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L GK L V SK V P E + KD++
Sbjct: 404 ALVQMADATQAQLAMNHLNGQKLY-GKMLRVTLSKH---QTVQLPREGQEDQGLTKDYSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP +T + L ++ T
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFADT 504
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGGYPDD 65
+L V N+ S DYT P L + G S PG + P + ++ GG
Sbjct: 179 ELQVNYNNDRSRDYTNPNLPAEQKGRSSHPG--YGDVGVAYPQMANTSAIAAAFGG---- 232
Query: 66 DYYGAPP-------------------AFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCC 106
G PP + + ++ +N L I + + + P
Sbjct: 233 ---GLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHA---- 285
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP P G++S D+ S
Sbjct: 286 LVQMGDGFQAELAVHFLKGAVLF-GKRLEVNFSK--------HPNITP-GTDS-HDYVNS 334
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTD 205
NRF + A KN P++++H P D+TEE++ +
Sbjct: 335 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMN 373
>gi|66820074|ref|XP_643683.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
gi|60471793|gb|EAL69748.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
Length = 695
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 100 SGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSES 159
S +G +VQM D AE + + L L + YSK + ++D SH E P S
Sbjct: 406 SSKKGAALVQMEDVQQAEAVIRFYHQMPLFK-DTLQINYSKHLSITD-SHNPESPTLS-- 461
Query: 160 FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
KDF S NRF +P K+ + PSQ L+F N P D TE +
Sbjct: 462 -KDFAQSNLNRFTHPINTYKH-LYKPSQTLYFSNVPKDFTETNFNQL 506
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +G+ L + SK V P E + KD+T
Sbjct: 365 ALVQMTDATQAQFAMSHLNGQRL-HGRVLRITLSKH---QSVQLPREGHEDQGLTKDYTN 420
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP +T+E L + T
Sbjct: 421 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFAST 465
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 489 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 544
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 545 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 585
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQ + A+ A+G+L+ + GK + V SK + VS P E D + + KD+ S
Sbjct: 319 LVQFANVHQAQTAIGHLNGVRVF-GKEMKVTNSKH---TSVSLPKEGEDTNLT-KDYMNS 373
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF P I PPS+ LH N P +TEE+LT +
Sbjct: 374 PLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSM 413
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri boliviensis
boliviensis]
Length = 1167
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+ S
Sbjct: 1014 LVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGNS 1069
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
+RF P I PPS LH N PP ++EE L
Sbjct: 1070 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 1106
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQ AE A+ NL++ L G+ L + +SK + ++ P E +G+ KD+TG
Sbjct: 401 ALVQFATPQQAETALANLNQAPLF-GRTLTINFSKH---NTIAMPREGTEGAHLTKDYTG 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF I PP +LH N P +EE + ++
Sbjct: 457 SPLHRFKVAGSKNFQHIFPPGSVLHVSNIPASASEEDIKNL 497
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 436 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 491
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 492 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 532
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 413 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 468
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 469 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 509
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D A+ AM +LS L GK L SK V P E + KDF+ S
Sbjct: 442 LVQMADANQAQLAMNHLSGQRL-YGKVLRATLSKH---QAVQLPREGQEDQGLTKDFSNS 497
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF P I PPS LH N PP +T + L ++
Sbjct: 498 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 537
>gi|47937813|gb|AAH71184.1| Hnrpll protein [Mus musculus]
Length = 100
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 2 SKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKV 42
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 407 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 462
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 463 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 503
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ A+ NL+ L GK + SK ++ P E + + KD++
Sbjct: 398 ALVQMADATQAQIAISNLNGQKLY-GKFIRATLSKH---QNIQLPREGEEDNGLTKDYSN 453
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF NP I PPS LH N PP ++ + L + RT
Sbjct: 454 SPLHRFKNPGSKNFQNIFPPSATLHLSNIPPSVSFDDLKSLFART 498
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +G+ + V +SK + V P E + KD++
Sbjct: 423 ALVQMSDGTQAQLAMSHLNGQRL-HGREMRVTFSKH---TTVQLPREGHEDQGLTKDYSN 478
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P + I PPS LH N PP + E+ L
Sbjct: 479 SPLHRFKKPGSKNYSNIFPPSATLHLSNIPPAVVEDDL 516
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDF 163
++QM + A+ AM +L K L GK+L SK V P E PD + KDF
Sbjct: 385 TALIQMAEPHQAQLAMTHLDK-LKLYGKQLRAMPSKH---QGVQMPKEGQPDAGLT-KDF 439
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP++TEE++ +
Sbjct: 440 INSALHRFKKPGSKNYQNIYPPSSTLHLSNIPPNVTEEEIKN 481
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L +GK + + SK +V P E + KD+
Sbjct: 428 ALVQMADANQAQLAMSHLSGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 483
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+EE L
Sbjct: 484 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDL 521
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +G+ + V +SK + V P E + KD++
Sbjct: 421 ALVQMSDGTQAQLAMSHLNGQRL-HGREMRVTFSKH---TTVQLPREGHEDQGLTKDYSN 476
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P + I PPS LH N PP + E+ L
Sbjct: 477 SPLHRFKKPGSKNYSNIFPPSATLHLSNIPPAVVEDDL 514
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
>gi|148706551|gb|EDL38498.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b [Mus
musculus]
gi|149050611|gb|EDM02784.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 111
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
S+ NRF + A KN IQPPS +LH++N P +TEE T +
Sbjct: 2 SKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLCN 44
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 402 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 498
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 387 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QTVQLPREGQEDQGLTKDFSN 442
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 443 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 483
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 427 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 482
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 483 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 523
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 500
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 465
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 500
>gi|260784453|ref|XP_002587281.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
gi|229272423|gb|EEN43292.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
Length = 304
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A AM +L+ L GK + V SK + V P E PD + KDFT
Sbjct: 149 ALIQMAEPHQANTAMQHLNN-LRVWGKNIRVTLSKH---NQVQLPKEGQPDAGLT-KDFT 203
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N P TEE+L D+
Sbjct: 204 SSPLHRFKKPGSKNFLNIYPPSDTLHLSNIPASTTEEELIDL 245
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 386 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 441
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 442 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 482
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 372 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 427
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 428 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 468
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 500
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 385 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 440
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 441 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 481
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D L AE A+ L LL GKRL V +SK HP P S+S D++G
Sbjct: 311 ALIQMADGLQAELAVNFLKGALLF-GKRLEVNFSK--------HPQIHP-SSDSI-DYSG 359
Query: 166 SRKNRFMNPKMAMKNR-IQPPSQLLHFFNAPPDITEE 201
S+ NRF N +A R P++++H + P D+TE+
Sbjct: 360 SKLNRF-NRNLAKNYRYCCSPTKMIHVSSLPGDVTED 395
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 366 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 421
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 422 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 462
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 401 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 497
>gi|281350475|gb|EFB26059.1| hypothetical protein PANDA_013339 [Ailuropoda melanoleuca]
Length = 368
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPP 43
PT+LNV +ND++SWDYT+P LGR G + +L E P
Sbjct: 247 PTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 286
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 90/235 (38%), Gaps = 37/235 (15%)
Query: 1 MSAPTKLNVYKNDSESWDYT---------QPTLGRTKDGPPSRPGPLLPEP--------P 43
S T LNV N+ +S DYT QP+L +T PG + P
Sbjct: 232 FSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAPGIISASPYAGAGFPPT 291
Query: 44 RRLPTPSGPPSMPNYRGGYPDDDYYGAPPAFE---------FERSYNSPVLDKFIGKPRG 94
+P +G S+PN G A A + NS +L + G
Sbjct: 292 FAIPQAAGL-SVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPEVG 350
Query: 95 MSGPPS------GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVS 148
+ G + +VQM D A+ AM +L+ L +GK + +A SK V
Sbjct: 351 VYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKL-HGKPIRIALSKH---QSVQ 406
Query: 149 HPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
P E + KD+ S +RF P I PPS LH N PP ++EE L
Sbjct: 407 LPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 461
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 397 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 452
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 453 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 493
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 401 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 497
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 500
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP P G++S D+ S
Sbjct: 284 LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HPNITP-GTDS-HDYVNS 332
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTD 205
NRF + A KN P++++H P D+TEE++ +
Sbjct: 333 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMN 371
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 401 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 497
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 465
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP P G++S D+ S
Sbjct: 286 LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HPNITP-GTDS-HDYVNS 334
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTD 205
NRF + A KN P++++H P D+TEE++ +
Sbjct: 335 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMN 373
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 344 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 399
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 400 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 440
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 466
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 398 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 453
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 454 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 494
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 367 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 422
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 423 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 463
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 367 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 422
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 423 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 463
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 553 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDRGLTKDYGN 608
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ITEE L
Sbjct: 609 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDL 646
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
+VQM + L A AM +L + + GK + V SK V P + PD + KD+
Sbjct: 359 ALVQMAEPLQAHIAMKHLDQIRVF-GKNITVVASKHTL---VQMPKDGQPDAGLT-KDYV 413
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP +TEE + +
Sbjct: 414 NSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPPTVTEEDIEE 454
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ L +G+ + V SK + V P E + KDF+
Sbjct: 421 ALIQMSDGTQAQLAMSHLNGQRL-HGRAMRVTLSKH---TTVQLPREGHEDQGLTKDFSN 476
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P + I PPS LH N PP + E+ L
Sbjct: 477 SPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDL 514
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 369 ALVQMADASQAQIAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 424
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 425 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 401 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 497
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D A+ AM +LS L GK L S+ V P E + KD++ S
Sbjct: 517 LVQMADANQAQLAMNHLSGQRL-YGKVLRATLSRH---QSVQLPREGQEDQGLTKDYSNS 572
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF P I PPS LH N PP +T + L ++
Sbjct: 573 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 612
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 456 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 511
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 512 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 552
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 360 ALVQMADASQAQIAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 415
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 416 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 456
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 328 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 383
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 384 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 424
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca mulatta]
Length = 456
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 302 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 357
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 358 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 398
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 380 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 435
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L +
Sbjct: 436 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKSL 476
>gi|358337425|dbj|GAA28121.2| regulator of differentiation 1 [Clonorchis sinensis]
Length = 757
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESF----- 160
M+Q+ D A+ A+ L K L GK++ SK + V+ P D SE+
Sbjct: 593 AMIQLADCNQAQMAVNYLDKVPLY-GKQMRCTLSKNM---AVTIPVPGKDDSEASAENIN 648
Query: 161 ---KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
+++ G R +RF P + PS++LH N P +TE+ LTD+ R
Sbjct: 649 QLNREYIGHRLHRFRRPNARYLQNLCAPSRVLHISNLPEQVTEDDLTDVFMRV 701
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 303 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 358
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 359 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 399
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 303 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 358
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 359 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 399
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 303 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 358
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 359 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 399
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDGLKNL 500
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGSQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP I+EE L +
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKSL 499
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 628 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 683
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 684 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 721
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D+ A+ AM +L+ L +GK + + SK + V P E + KD++ S
Sbjct: 501 LVQMSDSTQAQLAMSHLNGQRL-HGKPVRITLSKH---TSVQLPREGHEDQGLTKDYSNS 556
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
+RF P + I PPS LH N PP + E+ L
Sbjct: 557 PLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDL 593
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 84/234 (35%), Gaps = 30/234 (12%)
Query: 2 SAPTKLNVYKNDSESWDYT---------QPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGP 52
S LNV N+ +S DYT QPTL ++ LL P +P P
Sbjct: 255 SKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFAKETSLLGLPVAAVPGALSP 314
Query: 53 PSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS-- 100
++PN R G P G V + + G+ G
Sbjct: 315 LAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRV 373
Query: 101 ----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDG 156
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 374 KILYNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLSKH---QSVQLPREGLDD 429
Query: 157 SESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 430 QGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 483
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 404 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 459
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 460 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDGLKNL 500
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDGLKNL 466
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 404 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 462
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 463 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 521
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 522 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 577
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 578 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 632
>gi|328788959|ref|XP_625087.3| PREDICTED: polypyrimidine tract-binding protein 2 [Apis mellifera]
Length = 449
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 269 ALIQMAEPHQAHLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 323
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TEE++ D
Sbjct: 324 NSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTVTEEEIRD 364
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 323 ALIQMAEPHQAHLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 377
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TEE++ D
Sbjct: 378 NSPLHRFKKPGSKNYQNIYPPSATLHLSNIPTTVTEEEIRD 418
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A+ L +L GKRL V YSK ++ + +E +
Sbjct: 292 ALIQMGDGFQAELAVHFLKGAMLF-GKRLEVNYSKHANITQGADTHE----------YAN 340
Query: 166 SRKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTDI 206
S NRF + A KN P++++H P DITEE++ +
Sbjct: 341 SNLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSL 381
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L GK L SK + V P E + KD++
Sbjct: 420 ALVQMSDGTQAQLAMSHLNGQKLY-GKALRATLSKH---TTVQLPREGHEDQGLTKDYSN 475
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P + I PPS LH N PP +TE+ L
Sbjct: 476 SPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDDL 513
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 203 SKLVNLNVKYNNDKSRDYTRPDLP-SGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 261
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 262 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 320
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 321 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 376
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 377 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 431
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ + GK + V SK V+ P + D KDFT
Sbjct: 388 ALIQMCDPSQAQLAMSHLNGQKMY-GKIIRVTLSKH---QSVALPRDGLDDQGLTKDFTN 443
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N D+TEE L
Sbjct: 444 SSLHRFKKPGSKNFQNIFPPSATLHLSNVLQDVTEEDL 481
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 228 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 286
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 287 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 345
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 346 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 401
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 402 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 456
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP + G+++ ++ S
Sbjct: 287 LVQMGDGFQAELAVHFLKGAVLF-GKRLEVNFSK--------HP-NITQGADT-HEYVNS 335
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLT 204
NRF + A KN P++++H P DITEE++
Sbjct: 336 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIV 373
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 428 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKHQL---VQLPREGQEDQGLTKDFSN 483
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP + + L ++
Sbjct: 484 SPLHRFKKPGSKNFQNIYPPSATLHLSNIPPSVMVDDLKNL 524
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 219 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 277
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 278 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 336
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 337 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 392
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 393 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 447
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 377 ALVQMADGSQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 432
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP I+EE L +
Sbjct: 433 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKSL 473
>gi|307196190|gb|EFN77847.1| Polypyrimidine tract-binding protein 2 [Harpegnathos saltator]
Length = 312
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDF 163
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+
Sbjct: 157 SALIQMAEPHQALLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDY 211
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
T S +RF P I PPS LH N P + EE++ D
Sbjct: 212 TNSTLHRFKKPGSKNYQNIYPPSATLHLSNIPATVAEEEIKD 253
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 224 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 282
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 283 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 341
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 342 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 397
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 398 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 452
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH-PYELP-DGSES---FK 161
+VQM D+ A+ AM +L NG++L Y + V ++ H +LP +G E K
Sbjct: 381 LVQMSDSTQAQLAMSHL------NGQKL---YGRAVRITVSKHMSVQLPREGHEDQGLTK 431
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
DF+ S +RF P + I PPS LH N PP + E+ L
Sbjct: 432 DFSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPCVVEDDL 473
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 266 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 324
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 325 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 383
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 384 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 439
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 440 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 494
>gi|312090405|ref|XP_003146603.1| hypothetical protein LOAG_11032 [Loa loa]
Length = 184
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++Q + A+ A+ +L K + + K++ VA SK S+V P E PD + +D++
Sbjct: 30 ALIQYAEPQQAQLAIQHLDK-VRWHDKQIRVASSKH---SNVQMPKEGQPDAGLT-RDYS 84
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S +RF P I PPS LH N PP+ITEE LT
Sbjct: 85 QSSLHRFKKPGSKNYLNIYPPSSTLHLSNIPPNITEEFLT 124
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 255 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 313
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 314 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 372
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 373 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 428
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 429 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 483
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 286 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 344
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 345 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 403
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 404 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 459
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 460 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 514
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 266 SKLVNLNVKYNNDKSRDYTRPDLP-SGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 324
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 325 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 383
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 384 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 439
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 440 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 494
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 242 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 300
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 301 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 359
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 360 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 415
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 416 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 470
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 266 SKLVNLNVKYNNDKSRDYTRPDLP-SGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 324
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 325 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 383
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 384 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 439
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 440 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 494
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 255 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 313
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 314 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 372
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 373 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 428
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 429 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 483
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L GK L SK V P E + KDF+
Sbjct: 370 ALVQMADANQAQLAMNHLNGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 466
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 424 ALIQMAEPHQAHLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 478
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TEE++ D
Sbjct: 479 NSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTVTEEEIRD 519
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 255 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 313
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 314 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 372
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 373 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 428
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 429 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 483
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK L + SK V P E + KD++
Sbjct: 400 ALVQMADGNQAQLAMSHLNGQRL-HGKPLRITVSKH---QTVQLPREGQEDQGLTKDYST 455
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 456 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 493
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP-DGSESF---K 161
+VQM D A+ AM +L+ L +GK + + SK +LP DG E K
Sbjct: 371 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH-------QTVQLPRDGQEDHGLTK 422
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D+ S +RF P I PPS LH N PP ITEE L
Sbjct: 423 DYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDL 464
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 358 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 416
Query: 52 PPSMPNY----------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPS- 100
P ++PN R G P G V + + G+ G
Sbjct: 417 PLAIPNAAAAAAAAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQR 475
Query: 101 -----GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPD 155
+ ++QM D ++ AM +L+ + GK + V SK V P E D
Sbjct: 476 VKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLD 531
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 532 DQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 586
>gi|294461076|gb|ADE76105.1| unknown [Picea sitchensis]
Length = 218
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++QMGD AE A+ L +L + KR+ V YSK HP P + +D++ S
Sbjct: 69 LIQMGDGFQAELAVHYLKGAMLFD-KRMEVNYSK--------HPQITP--APDTRDYSSS 117
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
NRF + P++++H + PPD+TE+++
Sbjct: 118 NLNRFNRNVVKNYRYCCAPTKMIHVSSLPPDVTEDEII 155
>gi|358341535|dbj|GAA29842.2| polypyrimidine tract-binding protein 1, partial [Clonorchis
sinensis]
Length = 520
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++Q D A A+ LS L GK + +A S+ + V P E P+ + KD++
Sbjct: 389 ALIQFADAQQASTALQFLSGQRLW-GKPMKIAVSRH---NVVQLPREEPENGLT-KDYST 443
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPSQ+LH N PP I EE +
Sbjct: 444 SLLHRFRKPNSKNFLNIYPPSQILHLSNIPPTIAEEDI 481
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+EE L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDL 496
>gi|61806703|ref|NP_001013580.1| uncharacterized protein LOC541437 [Danio rerio]
gi|60649696|gb|AAH90482.1| Zgc:113074 [Danio rerio]
gi|182889494|gb|AAI65254.1| Zgc:113074 protein [Danio rerio]
Length = 183
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSH-PYELP-DGSES---F 160
++QM D A+ AM +L NG+++ +SK + ++ H +LP DG +
Sbjct: 30 ALIQMADMNQAQLAMSHL------NGQKM---FSKIIRVTMSKHQTVQLPRDGLDDQGLT 80
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KDFT S +RF P I PPS LH N P D+TEE L
Sbjct: 81 KDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEEDL 123
>gi|332027757|gb|EGI67824.1| Polypyrimidine tract-binding protein 2 [Acromyrmex echinatior]
Length = 308
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDF 163
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+
Sbjct: 153 SALIQMAEPHQALLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDY 207
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
T S +RF P I PPS LH N P + EE++ D
Sbjct: 208 TNSTLHRFKKPGSKNYQNIYPPSSTLHLSNIPATVAEEEIKD 249
>gi|324504709|gb|ADY42030.1| Regulator of differentiation 1 [Ascaris suum]
Length = 560
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++Q + A+ A+ +L K + + K++ VA SK S+V P E PD + +D++
Sbjct: 406 ALIQYAEPQQAQLAIQHLDK-VRWHDKQIRVATSKH---SNVQMPKEGQPDAGLT-RDYS 460
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S +RF P I PPS LH N PP+ITEE LT
Sbjct: 461 QSPLHRFKKPGSKNYMNIYPPSATLHLSNIPPNITEEYLT 500
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 371 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPRENQEDHGLTKDYGT 426
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP +TEE L
Sbjct: 427 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTEEDL 464
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 374 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 429
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L ++
Sbjct: 430 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKNL 470
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 437 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 492
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L ++
Sbjct: 493 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKNL 533
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 401 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 494
>gi|442756297|gb|JAA70308.1| Putative polypyrimidine tract-binding protein [Ixodes ricinus]
Length = 184
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP-DG---SESF 160
++QM + A+ AM +L K + +GK + V SK H +LP DG +
Sbjct: 29 SALIQMAEPQQAQLAMSHLDK-IKVHGKPVRVTPSKH-------HIVQLPKDGQPDAGLT 80
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
KD+ S +RF P I PPS LH N PP ++EEQ+ + +T
Sbjct: 81 KDYISSPLHRFKKPGSKNYQNIYPPSGTLHLSNIPPTVSEEQIREAFTQT 130
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 87/237 (36%), Gaps = 34/237 (14%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPS----------RPGPLLPEPPRRLPTPSG 51
S LNV N+ +S DYT+P L + DG P+ + LL P +P
Sbjct: 255 SKLVNLNVKYNNDKSRDYTRPDL-PSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALS 313
Query: 52 PPSMPNY------------RGGYPDDDYYGAPPAFEFERSYNSPVLDKFIGKPRGMSGPP 99
P ++PN R G P G V + + G+ G
Sbjct: 314 PLAIPNAXXXXXXXXAAAGRVGMPGVSA-GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDV 372
Query: 100 S------GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYEL 153
+ ++QM D ++ AM +L+ + GK + V SK V P E
Sbjct: 373 QRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREG 428
Query: 154 PDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
D KDF S +RF P I PPS LH N PP + EE L + T
Sbjct: 429 LDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 485
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 395 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 450
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 451 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 488
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++QMGD AE A+ L +L + KRL V +SK HP + G+++ D++ S
Sbjct: 261 LIQMGDGFQAELAVHFLKGAMLFD-KRLEVNFSK--------HP-NITQGADT-HDYSNS 309
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF P++++H P DITE+++ +
Sbjct: 310 NLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEDEIVTL 349
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 403 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+EE L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDL 496
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A+ L +L + KR+ V YSK HP P + +D++
Sbjct: 321 ALIQMGDGFQAELAVHYLKGAMLFD-KRMEVNYSK--------HPQITP--APDTRDYSS 369
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S NRF + P++++H + PPD+TE+++
Sbjct: 370 SNLNRFNRNVVKNYRYCCAPTKMIHVSSLPPDVTEDEII 408
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 402 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 495
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 402 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 495
>gi|307189437|gb|EFN73847.1| Polypyrimidine tract-binding protein 2 [Camponotus floridanus]
Length = 352
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 198 ALIQMAEPHQALLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 252
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P + EE++ D
Sbjct: 253 NSTLHRFKKPGSKNYQNIYPPSATLHLSNIPATVAEEEIKD 293
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A+ L +L + KRL V +SK HP + G+++ D++
Sbjct: 296 ALIQMGDGFQAELAVHFLKGAMLFD-KRLEVNFSK--------HP-NITQGADT-HDYSN 344
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S NRF P++++H P DITE+++ +
Sbjct: 345 SNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEDEIVTL 385
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 496
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 412 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 467
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 468 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 512
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 496
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQMGD AE A+ L +L G+RL V YSK +P + G E+ +D++
Sbjct: 297 ALVQMGDGFQAELAVHFLKGAMLF-GQRLEVNYSK--------YP-NINTGPET-RDYSN 345
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S NRF P++++H + P D+TEE++
Sbjct: 346 SNLNRFNRNAAKNYRYCCSPTKMIHVSSLPQDVTEEEIV 384
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 373 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 428
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 429 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 466
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 395 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 450
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 451 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 488
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 396 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 451
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 452 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 489
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D AE A+ +L+ L GK L + SK V P E + KD+
Sbjct: 434 ALVQMADGSQAELALRHLNGHKLY-GKALCILLSKH---QSVKLPREGKEDQGLTKDYAN 489
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N P ++EE+L ++
Sbjct: 490 SPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNL 530
>gi|393904664|gb|EJD73763.1| polypyrimidine tract-binding protein 1 [Loa loa]
Length = 546
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++Q + A+ A+ +L K + + K++ VA SK S+V P E PD + +D++
Sbjct: 392 ALIQYAEPQQAQLAIQHLDK-VRWHDKQIRVASSKH---SNVQMPKEGQPDAGLT-RDYS 446
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S +RF P I PPS LH N PP+ITEE LT
Sbjct: 447 QSSLHRFKKPGSKNYLNIYPPSSTLHLSNIPPNITEEFLT 486
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 384 ALIQMADGHQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 439
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 440 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 484
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 424 ALIQMAEPHQAHLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 478
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TE+++ D
Sbjct: 479 NSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTVTEDEIRD 519
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A A+ ++ K L GK++ V SK V P E PD + KD+T
Sbjct: 424 ALIQMAEPHQAHLALTHMDK-LRVFGKQIKVMLSKH---QTVQLPKEGQPDAGLT-KDYT 478
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TE+++ D
Sbjct: 479 NSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTVTEDEIRD 519
>gi|350583628|ref|XP_003125947.3| PREDICTED: polypyrimidine tract-binding protein 2-like [Sus scrofa]
Length = 345
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 191 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 246
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 247 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 291
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ L G+ L + SK + V P E + KD++
Sbjct: 410 ALIQMSDGTQAQLAMSHLNGQKLY-GRPLRITLSKH---TTVQMPREGHEDQGLTKDYSN 465
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P + I PPS LH N PP + E+ L + G +
Sbjct: 466 SPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFGSS 510
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 427 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 482
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 483 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 527
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 372 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDQGLTKDYGN 427
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I EE L
Sbjct: 428 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIAEEDL 465
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 366 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 421
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 422 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 459
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM + A+ A+ +L L GK++ V+ SK + V P E PD S +D++
Sbjct: 324 ALIQMAEPHQAQTAIAHLHGIQLY-GKKMFVSSSK---YAQVQLPKE-PDPSGLTQDYSQ 378
Query: 166 SRKNRFMNPKMAMKN--RIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF K+ +N I PPS LH N PP +TEE + ++
Sbjct: 379 SALHRF--KKVGSRNFQNIYPPSATLHLSNIPPSVTEEDIKEL 419
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ L G+ L + SK + V P E + KD++
Sbjct: 432 ALIQMSDGTQAQLAMSHLNGQKLY-GRPLRITLSKH---TTVQMPREGHEDQGLTKDYSN 487
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
S +RF P + I PPS LH N PP + E+ L + G
Sbjct: 488 SPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFG 530
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK L SK V P E + KD++
Sbjct: 398 ALVQMADGNQAQLAMSHLNGQRL-HGKPLRTTVSKH---QTVQLPREGQEDQGLTKDYST 453
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 454 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 491
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 386 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 441
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 442 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 486
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 376 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 431
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 432 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 469
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|349602796|gb|AEP98824.1| Regulator of differentiation 1-like protein, partial [Equus
caballus]
Length = 173
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 19 ALVQMADANQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 74
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP +T + L ++
Sbjct: 75 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 115
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 402 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 498
>gi|149025818|gb|EDL82061.1| polypyrimidine tract binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 322
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 169 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 224
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 225 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 269
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 442 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGS 497
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 498 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 535
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 452 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 507
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 508 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 552
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 386 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 441
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 442 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 486
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 386 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 441
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 442 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 486
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 375 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 475
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 341 SALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFG 396
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 397 NSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 442
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQ-VFLSDVSHPYELPDGSESFKDFT 164
++QM D L AE A+ L +L GK+L V YSK +D PD +D++
Sbjct: 296 ALIQMADGLQAELAVLYLKGAMLF-GKKLEVNYSKYPTVTAD-------PDA----RDYS 343
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
S NRF + + P++++H P DITE+ + + G
Sbjct: 344 TSHLNRFNSNVVKNYRHCCAPTKMIHISALPQDITEDTIHSLVG 387
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 372 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDQGLTKDYGN 427
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I EE L
Sbjct: 428 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIAEEDL 465
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 375 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 475
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 376 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 431
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 432 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 469
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4 [Canis
lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 326 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 381
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 382 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 426
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 375 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 475
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 386 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 441
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 442 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 486
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 377 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 432
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 433 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 470
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP-DG---SESFK 161
++QM + A+ AM +L K + +GK + V SK H +LP DG + K
Sbjct: 358 ALIQMAEPQQAQLAMSHLDK-IKVHGKPVRVTPSKH-------HIVQLPKDGQPDAGLTK 409
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D+ S +RF P I PPS LH N PP ++EEQ+
Sbjct: 410 DYISSPLHRFKKPGSKNYQNIYPPSGTLHLSNIPPTVSEEQI 451
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQ-VFLSDVSHPYELPDGSESFKDFT 164
++QM D L AE A+ L +L GK+L V YSK +D PD +D++
Sbjct: 292 ALIQMADGLQAELAVLYLKGAMLF-GKKLEVNYSKYPTVTAD-------PDA----RDYS 339
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
S NRF + + P++++H P DITE+ + + G
Sbjct: 340 TSHLNRFNSNVVKNYRHCCAPTKMIHISALPQDITEDTIHSLVG 383
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ A+ +LS L GK L SK V P E + KDF+
Sbjct: 351 ALVQMADANQAQLAINHLSGQRLY-GKVLRATLSKH---QSVQLPREGQEDQGLTKDFSN 406
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP + + L ++
Sbjct: 407 SPLHRFKKPGSKNFQNIYPPSATLHLSNIPPSVMVDDLKNL 447
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 347 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 402
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 403 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 447
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ +M +L+ L +G+ + V SK + V P E + KD++
Sbjct: 423 ALVQMSDGTQAQLSMSHLNGQRL-HGRAIRVTLSKH---TTVQLPREGHEDQGLTKDYSN 478
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P + I PPS LH N PP + E+ L + T
Sbjct: 479 SPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLRRLFAST 523
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 423 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 478
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 479 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 523
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 375 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 475
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ L +GK L SK V P E + KD++
Sbjct: 393 ALIQMADGNQAQLAMSHLNGQRL-HGKPLRTTVSKH---QTVQLPREGQEDQGLTKDYST 448
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 449 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 486
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 478
>gi|78101308|pdb|2ADC|A Chain A, Solution Structure Of Polypyrimidine Tract Binding Protein
Rbd34 Complexed With Cucucu Rna
gi|88192784|pdb|2EVZ|A Chain A, Structure Of Rna Binding Domains 3 And 4 Of Polypyrimidine
Tract Binding Protein
Length = 229
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 75 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 130
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 131 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 168
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D AE A+ +L+ L +GK L + SK + V P E + KD+
Sbjct: 421 ALVQMADGCQAELALKHLNGHKL-HGKSLCIMPSKHL---SVKLPREGKEDQGLTKDYVN 476
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N P + EE L +
Sbjct: 477 SPLHRFKKPGSKNFQNIFPPSATLHLSNLPTSVLEEDLKKL 517
>gi|328869052|gb|EGG17430.1| hypothetical protein DFA_08425 [Dictyostelium fasciculatum]
Length = 603
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 68 YGAPPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTL 127
YG + ++R +N L G + + SG MVQM D L A+ A+ N +
Sbjct: 335 YGLVESMSYDRIFN---LSCIYGNVQKIKIVKSG--HSVMVQMEDALQAD-AIINYYNQI 388
Query: 128 LCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQ 187
G+ L V SK ++D S+P + + +++T + RF + K+ + PSQ
Sbjct: 389 TLFGQPLNVMCSKHDTITDSSNPESVTNS----RNYTHTPFKRFSHSISTYKH-LYKPSQ 443
Query: 188 LLHFFNAPPDITE 200
L+F N P D TE
Sbjct: 444 TLYFSNVPKDFTE 456
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP-DG---SESFK 161
++QM + A+ AM +L K + GK + V SK H +LP DG + K
Sbjct: 405 ALIQMAEPQQAQLAMSHLDK-IKVYGKPIRVTPSKH-------HIVQLPKDGQPDAGLTK 456
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D+ S +RF P I PPS LH N PP ++EEQ+
Sbjct: 457 DYINSPLHRFKKPGSKNYQNIYPPSATLHLSNIPPTVSEEQI 498
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM ++ A+ AM +L+ + GK + V SK V+ P + D KDF
Sbjct: 358 ALIQMSESNQAQLAMSHLNGQKMY-GKIIRVTLSKH---QTVALPRDGLDDQGLTKDFAN 413
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P D+TE+ L
Sbjct: 414 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDL 451
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 347 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 402
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 403 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 440
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 45/230 (19%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG--------PLLPEPPRRLPTPSGP 52
S T+L V N+ S D+T P+L + G S+ G L P R P
Sbjct: 142 FSNLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR----PVAF 197
Query: 53 PSMPN-------YRGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRG 94
P M N + GG P +D P + ++ +N L I + +
Sbjct: 198 PQMGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKL 257
Query: 95 MSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP 154
+ P +VQMGD AE A+ L +L GKRL V +SK +P P
Sbjct: 258 LRSKPDHA----LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------YPNITP 304
Query: 155 DGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
+ D++ S NRF P++++H P DITEE++
Sbjct: 305 --APDTHDYSNSNLNRFNRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIV 352
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP-DG---SESFK 161
++QM + A+ AM +L K + GK + V SK H +LP DG + K
Sbjct: 400 ALIQMAEPQQAQLAMSHLDK-IKVYGKPIRVTPSKH-------HIVQLPKDGQPDAGLTK 451
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
D+ S +RF P I PPS LH N PP ++EEQ+
Sbjct: 452 DYINSPLHRFKKPGSKNYQNIYPPSATLHLSNIPPTVSEEQI 493
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 45/230 (19%)
Query: 1 MSAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG--------PLLPEPPRRLPTPSGP 52
S T+L V N+ S D+T P+L + G S+ G L P R P
Sbjct: 178 FSNLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR----PVAF 233
Query: 53 PSMPN-------YRGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRG 94
P M N + GG P +D P + ++ +N L I + +
Sbjct: 234 PQMGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKL 293
Query: 95 MSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELP 154
+ P +VQMGD AE A+ L +L GKRL V +SK +P P
Sbjct: 294 LRSKPDHA----LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------YPNITP 340
Query: 155 DGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
+ D++ S NRF P++++H P DITEE++
Sbjct: 341 --APDTHDYSNSNLNRFNRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIV 388
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF+
Sbjct: 378 ALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFSN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P +ITE+ L
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDL 471
>gi|350583630|ref|XP_003481556.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Sus scrofa]
Length = 255
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 101 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 156
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 157 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 201
>gi|119581560|gb|EAW61156.1| polypyrimidine tract binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 197
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 43 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 98
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 99 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 136
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A+ L +L KRL V +SK HP + G+++ ++
Sbjct: 296 ALIQMGDGFQAELAVHFLKGAMLFE-KRLEVNFSK--------HP-NITQGADT-HEYIN 344
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S NRF P++++H P DITEE++ +
Sbjct: 345 SNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSL 385
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 376 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 431
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 432 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 472
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP + G+++ ++ S
Sbjct: 296 LVQMGDGFQAELAVYFLKGAMLF-GKRLEVNFSK--------HP-NIIQGADT-HEYMNS 344
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF P++++H P DI EE++ +
Sbjct: 345 NLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDIIEEEIASL 384
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 351 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 406
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 407 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 444
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 375 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 471
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 376 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 431
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 432 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 472
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++Q D A A+ NL+ L G + V+ SK + V P +G E KD++
Sbjct: 340 ALIQFADAQQASTALQNLNNVTLF-GNEMRVSRSKHDY---VHMPKSDDEGKELTKDYSN 395
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I P Q LH N P +TE++L ++
Sbjct: 396 SPLHRFKKPGSKNFQNIFAPIQSLHLSNIPESVTEDELQEM 436
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 375 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 431 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 471
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 464 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 518
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 519 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 559
>gi|194389366|dbj|BAG61644.1| unnamed protein product [Homo sapiens]
Length = 204
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 49 SALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFG 104
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 105 NSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 150
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 403 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QSVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 496
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK L SK V P E + KD++
Sbjct: 318 ALVQMADGNQAQLAMSHLNGQRL-HGKPLRTTVSKH---QTVQLPREGQEDQGLTKDYST 373
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 374 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 411
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 509 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 563
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 564 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 604
>gi|355714185|gb|AES04922.1| polypyrimidine tract binding protein 2 [Mustela putorius furo]
Length = 172
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 18 SALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFG 73
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 74 NSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 119
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 496
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 340 ALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 395
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISGRT 210
S +RF P I PPS LH N PP + EE L + T
Sbjct: 396 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANT 440
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 336 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 391
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 392 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 432
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ + GK + V SK V+ P + D KD+
Sbjct: 429 ALIQMSDANQAQLAMSHLNGQKMY-GKIIRVTLSKH---QSVALPRDGLDDQGLTKDYAN 484
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ++TE+ L
Sbjct: 485 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNVTEDDL 522
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 335 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 390
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 391 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 431
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 506 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 560
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 561 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 601
>gi|31416927|gb|AAH08217.2| HNRPLL protein [Homo sapiens]
Length = 275
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGR 261
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 346 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 401
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 402 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 442
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 403 ALVQMADGNQAQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 496
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 345 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 400
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 401 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 441
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 396 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QSVQLPREGQEDQGLTKDYGN 451
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 452 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 489
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 396 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 451
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 452 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 489
>gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]
Length = 262
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 239 PTRLNVIRNDNDSWDYTKPYLGR 261
>gi|157879788|pdb|1QM9|A Chain A, Nmr, Representative Structure
Length = 198
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 44 ALVQMADGNQAQLAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 99
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++EE L
Sbjct: 100 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 137
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 403 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 458
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 459 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 496
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 496 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 550
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 551 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 591
>gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 293 PTRLNVIRNDNDSWDYTKPYLGR 315
>gi|56784770|dbj|BAD81991.1| polypirimidine tract binding protein-like [Oryza sativa Japonica
Group]
Length = 213
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQ-VFLSDVSHPYELPDGSESFKDFTG 165
++QM D L AE A+ L +L GK+L V YSK +D PD +D++
Sbjct: 67 LIQMADGLQAELAVLYLKGAMLF-GKKLEVNYSKYPTVTAD-------PDA----RDYST 114
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
S NRF + + P++++H P DITE+ + + G
Sbjct: 115 SHLNRFNSNVVKNYRHCCAPTKMIHISALPQDITEDTIHSLVG 157
>gi|52545658|emb|CAH56358.1| hypothetical protein [Homo sapiens]
Length = 216
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 178 PTRLNVIRNDNDSWDYTKPYLGR 200
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 394 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QSVQLPREGQEDQGLTKDYGN 449
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 450 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 487
>gi|417398360|gb|JAA46213.1| Putative heteroproteinous nuclear ribonucleoprotein l [Desmodus
rotundus]
Length = 285
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 244 PTRLNVIRNDNDSWDYTKPYLGR 266
>gi|301777342|ref|XP_002924098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Ailuropoda melanoleuca]
Length = 281
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 258 PTRLNVIRNDNDSWDYTKPYLGR 280
>gi|119620775|gb|EAX00370.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c [Homo
sapiens]
Length = 175
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 139 PTRLNVIRNDNDSWDYTKPYLGR 161
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D A+ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 465 ALIQMSDPNQAQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 519
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + E+ L +
Sbjct: 520 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEDTLKE 560
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 412 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 467
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 468 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 505
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQM D AE A+ +L+ L GK L + SK V P E + + K++ S
Sbjct: 406 LVQMADGSQAELALKHLNGHKL-YGKALCILPSKH---QSVKLPREGKEDQDLTKEYVNS 461
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+RF P I PPS LH N P +++E+L ++
Sbjct: 462 WLHRFKKPGSKNFQNIFPPSATLHLSNLPSSVSKEELKNL 501
>gi|74222755|dbj|BAE42243.1| unnamed protein product [Mus musculus]
Length = 172
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 139 PTRLNVIRNDNDSWDYTKPYLGR 161
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP + G+++ ++ S
Sbjct: 299 LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HP-NITQGADT-HEYANS 347
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF P++++H + ++TEE++ ++
Sbjct: 348 NLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVNL 387
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 402 ALVEMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 498
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD A+ A+ L +L KRL V +SK HP P G+++ ++
Sbjct: 296 ALIQMGDGFQAKLAVHFLRGAMLFE-KRLEVNFSK--------HPKITP-GADT-HEYIS 344
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S NRF PP++++H P DITEE++ +
Sbjct: 345 SNLNRFNRNAAKNYRYCCPPTKMIHLSTLPLDITEEEIVSL 385
>gi|253723235|pdb|2E5I|A Chain A, Solution Structure Of Rna Binding Domain 2 In
Heterogeneous Nuclear Ribonucleoprotein L-Like
Length = 124
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 4 PTKLNVYKNDSESWDYTQPTLGR 26
PT+LNV +ND++SWDYT+P LGR
Sbjct: 101 PTRLNVIRNDNDSWDYTKPYLGR 123
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 478 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 532
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 533 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 573
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 401 ALVEMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 456
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 457 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 377 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QSVQLPREGQEDQGLTKDYGN 432
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I+E+ L
Sbjct: 433 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 470
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 377 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 432
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 433 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 470
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 450 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 504
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 505 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 545
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D ++ AM +L+ + GK + V SK V P E D KDF
Sbjct: 378 ALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLSKH---QTVQLPREGLDDQGLTKDFGN 433
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 471
>gi|330801720|ref|XP_003288872.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
gi|325081065|gb|EGC34595.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
Length = 663
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 100 SGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSES 159
S +G +VQM D AE + + L L + YSK + ++D SH E P S++
Sbjct: 397 STKKGAALVQMEDPQQAELIIRFYHQMPLFK-DTLQITYSKHLSITD-SHNPESPSLSKN 454
Query: 160 FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITE 200
F D S +RF +P K+ + PSQ L+F N P D TE
Sbjct: 455 FSD---SSLHRFSHPINTYKH-LYKPSQTLYFSNVPKDFTE 491
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM D ++ AM +LS L GK++ V SK V P E PD + KDF+
Sbjct: 402 ALIQMSDPNQSQLAMKHLSGVKLY-GKQIRVTASKHQM---VQLPKEGQPDAGLT-KDFS 456
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N PP + EE L +
Sbjct: 457 TSPLHRFKKPGSKNFLNIYPPSSTLHLSNIPPTVDEETLKE 497
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 377 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 432
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 433 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 470
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDF 163
+VQ+ + A+ AM +L+ + GK L + SK V P E PD + KDF
Sbjct: 404 TALVQLAEPHQAQTAMTHLNGIKMF-GKPLRITLSKHQL---VQLPKEGQPDAGLT-KDF 458
Query: 164 TGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S +RF P I PPS LH N PP++TE+ +T
Sbjct: 459 QSSPLHRFKKPGSKNFMNIYPPSATLHLSNIPPNVTEQDIT 499
>gi|57004|emb|CAA43203.1| pyrimidine binding protein 2 [Rattus norvegicus]
Length = 367
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 213 ALVEMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 268
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 269 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 309
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 45/227 (19%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPG--------PLLPEPPRRLPTPSGPPSMPN 57
+L V N+ S D+T P+L G S+PG PL P R P G M N
Sbjct: 143 ELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPLQPSGAR----PVGFSQMAN 198
Query: 58 -------YRGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRGMSGPP 99
+ GG P +D P + ++ +N + I + + + P
Sbjct: 199 AAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKP 258
Query: 100 SGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSES 159
+VQMGD AE A+ L +L GKRL V +SK HP + G+++
Sbjct: 259 DHA----LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HP-NITQGADT 304
Query: 160 FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
++ S NRF P++++H + ++TEE++ +
Sbjct: 305 -HEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVSL 350
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQMGD AE A+ L +L GKRL V +SK +P P + D++
Sbjct: 329 ALVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------YPNITP--APDTHDYSN 377
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S NRF P++++H P DITEE++
Sbjct: 378 SNLNRFNRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIV 416
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 376 ALVEMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 431
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PPS LH N PP ++E+ L +
Sbjct: 432 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 472
>gi|345786845|ref|XP_868626.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Canis
lupus familiaris]
Length = 197
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 43 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 98
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 99 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 136
>gi|410933304|ref|XP_003980031.1| PREDICTED: polypyrimidine tract-binding protein 2-like, partial
[Takifugu rubripes]
Length = 345
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QM D A+ AM +L+ + GK + V SK V+ P + D KD+
Sbjct: 192 ALIQMSDANQAQLAMSHLNGQKMY-GKIIRVTLSKH---QSVALPRDGLDDQGLTKDYAN 247
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ++TE+ L
Sbjct: 248 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNVTEDDL 285
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP + G+++ ++ S
Sbjct: 286 LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HP-NITQGADT-HEYANS 334
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF P++++H + ++TEE++ +
Sbjct: 335 NLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVSL 374
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 400 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 455
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPD 197
S +RF P I PPS LH N P D
Sbjct: 456 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPKD 487
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKRL V +SK HP + G+++ ++ S
Sbjct: 288 LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK--------HP-NITQGADT-HEYANS 336
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
NRF P++++H + ++TEE++ +
Sbjct: 337 NLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVSL 376
>gi|355714179|gb|AES04920.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 181
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 28 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 83
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 84 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 121
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 400 ALVQMADASQAQIAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 455
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPD 197
S +RF P I PPS LH N P D
Sbjct: 456 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPKD 487
>gi|417408450|gb|JAA50776.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 185
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK +V P E + KD+
Sbjct: 31 ALVQMADGSQAQLAMSHLNGHKL-HGKPVRITLSKH---QNVQLPREGQEDQGLTKDYGN 86
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP ++E+ L
Sbjct: 87 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDL 124
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D ++ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 402 ALVQMADGNQSQLAMSHLNGQKL-HGKPIRITLSKH---QTVQLPREGQEDQGLTKDYGN 457
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N PP I E+ L
Sbjct: 458 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIIEDDL 495
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQ + A+ A+ +L+ +L GK+L + SK + V P + +DFT
Sbjct: 322 ALVQFREAQQAQNAVTHLNGCMLY-GKKLHLTLSKH---TQVQMPQPGSNEDALTEDFTN 377
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ITEE L
Sbjct: 378 SPLHRFKKPGSKNYQNIYPPSPTLHLSNIPDGITEEYL 415
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSE----SFK 161
++QM + A AM +L K L GK+L V SK H +LP + K
Sbjct: 433 ALIQMAEPQQAHVAMTHLDKIKLF-GKQLRVTPSKH-------HMVQLPKEGQPDAGLTK 484
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
D+ S +RF P I PPS LH N PP EE++ +
Sbjct: 485 DYISSPLHRFKKPGSKNYQNIYPPSATLHLSNIPPTCGEEKIQE 528
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKR+ V +SK HP + G+++ ++ S
Sbjct: 286 LVQMGDGFQAELAVHFLKGAMLF-GKRMEVNFSK--------HP-NITQGADT-HEYMHS 334
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTDI 206
NRF + A KN P++++H P ITEE++ ++
Sbjct: 335 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQVITEEEIGNL 374
>gi|156322331|ref|XP_001618332.1| hypothetical protein NEMVEDRAFT_v1g154871 [Nematostella vectensis]
gi|156198513|gb|EDO26232.1| predicted protein [Nematostella vectensis]
Length = 140
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 119 AMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAM 178
A+G+L+ + GK + V SK + VS P E D + + KD+ S +RF P
Sbjct: 1 AIGHLNGVRVF-GKEMKVTNSKH---TSVSLPKEGEDTNLT-KDYMNSPLHRFKKPGSKN 55
Query: 179 KNRIQPPSQLLHFFNAPPDITEEQLTDI 206
I PPS+ LH N P +TEE+LT +
Sbjct: 56 FQNIFPPSRTLHLSNIPESVTEEELTSM 83
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++Q+ + A AM ++ K L GK + V SK V P E PD + KD+T
Sbjct: 433 ALIQLAEPHQAHLAMTHMDK-LKVFGKPIRVMLSKH---QTVQLPREGQPDAGLT-KDYT 487
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P ++EE++ +
Sbjct: 488 NSPLHRFKKPGSKNYQNIYPPSATLHLSNIPATVSEEEIKE 528
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++Q+ D A+ AM +L+ + GK + V SK V+ P E D KDF G
Sbjct: 370 ALIQLSDGNQAQLAMSHLNGQKVF-GKVMRVTLSKH---QTVALPREGLDDQLLTKDFAG 425
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N + EE L
Sbjct: 426 SPLHRFKKPGSKNFQNIFPPSATLHLSNIREGVGEEDL 463
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 104 GCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA--VAYSKQVFLSDVSHPYELPDGSESFK 161
G +VQM D A+ A+ L NG+RL V ++ + P E + K
Sbjct: 332 GIALVQMADATQAQLAINYL------NGQRLYGRVMHATLSKYQTIQLPREGQEDKGLTK 385
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
D++ S +RF NP I PPS LH N P T + L ++
Sbjct: 386 DYSNSPLHRFKNPCSKNFQNIFPPSATLHLSNIPSSATVDDLKNL 430
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 46/225 (20%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSGPPSMPN-- 57
+L V N+ S D+T P+L + G S+ G +P R G P MPN
Sbjct: 179 ELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGAR---TVGFPQMPNAS 235
Query: 58 -----YRGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRGMSGPPSG 101
+ GG P +D P + ++ +N + I + + + P
Sbjct: 236 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDH 295
Query: 102 PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
+VQMGD AE A+ L +L GKRL V +SK S+++ G+++
Sbjct: 296 A----LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK---YSNIT------TGADT-H 340
Query: 162 DFTGSRKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLT 204
++ S NRF + A KN P++++H DITEE++
Sbjct: 341 EYMNSSLNRF--NRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIV 383
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +LS L GK L SK V P E + KDF+
Sbjct: 359 ALVQMADASQAQLAMNHLSGQRLY-GKVLRATLSKH---QAVQLPREGQEDQGLTKDFSN 414
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAP 195
S +RF P I PPS LH N P
Sbjct: 415 SPLHRFKKPGSKNFQNIFPPSATLHLSNIP 444
>gi|297713191|ref|XP_002833087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Pongo abelii]
Length = 339
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSG 51
+ PT+LNV+K+D ++WDYT P L D P S P PLL + P P G
Sbjct: 278 AKPTRLNVFKSDQDTWDYTNPNLSGQGD-PGSNPNKRQRQPPLLGDHPAEYGGPHG 332
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 46/225 (20%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPG------PLLPEPPRRLPTPSGPPSMPN-- 57
+L V N+ S D+T P+L + G S+ G +P R G P MPN
Sbjct: 181 ELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGAR---TVGFPQMPNAS 237
Query: 58 -----YRGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRGMSGPPSG 101
+ GG P +D P + ++ +N + I + + + P
Sbjct: 238 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDH 297
Query: 102 PEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFK 161
+VQMGD AE A+ L +L GKRL V +SK S+++ G+++
Sbjct: 298 A----LVQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK---YSNIT------TGADT-H 342
Query: 162 DFTGSRKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLT 204
++ S NRF + A KN P++++H DITEE++
Sbjct: 343 EYMNSSLNRF--NRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIV 385
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L L +GK + + SK +V P E + KD+
Sbjct: 392 ALVQMADGSRAQLAMSHLDGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 447
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP--DITEEQLTDI 206
S +RF P I PPS LH N PP I+EE L +
Sbjct: 448 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISISEEDLKSL 490
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + SK V P E + KD+
Sbjct: 375 ALVQMADGSQAQLAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQGLTKDYGS 430
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
S +RF P I PS LH N PP ++E+ L +
Sbjct: 431 SPLHRFKKPGSKNFQNIFLPSATLHLSNIPPSVSEDDLKSL 471
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A+ L T+L KR+ V +SK + + S+ D++
Sbjct: 289 ALIQMGDGYQAELAVYYLRGTMLFE-KRMEVNFSK----------HSQINPSQDTHDYSS 337
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + P++++H + P DITE L +
Sbjct: 338 SNLNRFNRNALKNYKYCCSPTKMIHVSSLPTDITEVDLMN 377
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM + A AM +L K L GK + V SK V P E S KD+T
Sbjct: 451 ALVQMAEPHQAHLAMLHLDKVRLY-GKYIRVMQSK---YQTVQLPKEGQPDSGLTKDYTS 506
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ++E+ L
Sbjct: 507 SPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTLSEDFL 544
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 45/219 (20%)
Query: 6 KLNVYKNDSESWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPN-------Y 58
+L V N+ S D+T P+L + G S+ G G P MPN +
Sbjct: 179 ELQVNYNNERSRDFTNPSLPSEQKGRSSQSG--------YGDAGVGFPQMPNASAIAAAF 230
Query: 59 RGGYP-----DDDYYGA------PPAFEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCM 107
GG P +D P + ++ +N + I + + + P +
Sbjct: 231 GGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHA----L 286
Query: 108 VQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSR 167
VQMGD AE A+ L +L GKRL V +SK S+++ G+++ ++ S
Sbjct: 287 VQMGDGFQAELAVHFLKGAMLF-GKRLEVNFSK---YSNIT------TGADT-HEYMNSS 335
Query: 168 KNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLT 204
NRF + A KN P++++H DITEE++
Sbjct: 336 LNRF--NRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIV 372
>gi|76156506|gb|AAX27703.2| SJCHGC04647 protein [Schistosoma japonicum]
Length = 213
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 14/144 (9%)
Query: 76 FERSYNSPVLDKFI--GKPRGMSGPP------SGPEGCCMVQMGDTLSAERAMGNLSKTL 127
F +S+N + +F K R + G +VQ D+ A RA+ L+
Sbjct: 12 FHKSFNVYLTSRFCIKFKYRSVYGDVLRVKILHNKRSTALVQFTDSTQALRAVNFLNGVS 71
Query: 128 LCNGKRLAVAYSKQVFLSD--VSHPYELPDGSESFK---DFTGSRKNRFMNPKMAMKNRI 182
L GK + SK F++ + PDG K D+TG + +RF I
Sbjct: 72 L-YGKIIRCVLSKNSFINMPPTNLQNLTPDGENEIKTTCDYTGHKLHRFRRANSRNHFNI 130
Query: 183 QPPSQLLHFFNAPPDITEEQLTDI 206
PS++LH N P I+++ L +
Sbjct: 131 CAPSKVLHITNLPESISDDTLKSV 154
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L L +GK + + SK +V P E + KD+
Sbjct: 366 ALVQMADGSRAQLAMSHLDGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGN 421
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPP--DITEEQLTDI 206
S +RF P I PPS LH N PP I+EE L +
Sbjct: 422 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISISEEDLKSL 464
>gi|194391004|dbj|BAG60620.1| unnamed protein product [Homo sapiens]
Length = 240
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 4 PTKLNVYKNDSESWDYTQPTL 24
PT+LNV+KND ++WDYT P L
Sbjct: 198 PTRLNVFKNDQDTWDYTNPNL 218
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM + A AM +L K L GK + V SK V P E S KD+T
Sbjct: 470 ALVQMAEPHQAHLAMLHLDKVRLY-GKYIRVMQSK---YQTVQLPKEGQPDSGLTKDYTS 525
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ++E+ L
Sbjct: 526 SPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTLSEDFL 563
>gi|256076159|ref|XP_002574381.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 639
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQ D A A+ +L+ L GK L +A S+ + V P E D + KD+T S
Sbjct: 487 LVQFSDPQQALTALYHLNGQPL-YGKPLKIAVSR---FNIVQLPKEDNDVGLT-KDYTNS 541
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
+RF P I P+ +LH N P ITEE++
Sbjct: 542 PLHRFRKPNSKNFTNIYAPNHVLHLSNIPSAITEEEV 578
>gi|26351857|dbj|BAC39565.1| unnamed protein product [Mus musculus]
Length = 329
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTL 24
+ PT+LNV+KND ++WDYT P L
Sbjct: 234 AKPTRLNVFKNDQDTWDYTNPNL 256
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM + A AM +L K L GK + V SK V P E S KD+T
Sbjct: 419 ALVQMAEPHQAHLAMLHLDKVRLY-GKYIRVMQSK---YQTVQLPKEGQPDSGLTKDYTS 474
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
S +RF P I PPS LH N P ++E+ L
Sbjct: 475 SPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTLSEDFL 512
>gi|355694928|gb|AER99833.1| heteroproteinous nuclear ribonucleoprotein L [Mustela putorius
furo]
Length = 249
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTL 24
+ PT+LNV+KND ++WDYT P L
Sbjct: 224 AKPTRLNVFKNDQDTWDYTNPNL 246
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+VQMGD AE A+ L +L GKR+ V +SK HP + G+++ ++ S
Sbjct: 284 LVQMGDGFQAELAVHFLKGAMLF-GKRMEVNFSK--------HP-NITQGADT-HEYMHS 332
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLTDI 206
NRF + A KN P++++H P ITE+++ +
Sbjct: 333 NLNRF--NRNAAKNYRYCCSPTKMIHLSTLPQVITEDEIVSL 372
>gi|194375115|dbj|BAG62670.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 4 PTKLNVYKNDSESWDYTQPTL 24
PT+LNV+KND ++WDYT P L
Sbjct: 137 PTRLNVFKNDQDTWDYTNPNL 157
>gi|226468142|emb|CAX76298.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 495
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 120 MGNLSKTLLCNGKRL-----AVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNP 174
+ NL NG+RL +A S+ + V P E + + KD+T S +RF P
Sbjct: 394 ITNLIALQFLNGQRLWDKPMKIAVSRH---NIVQLPKEDTENGLT-KDYTNSLLHRFRKP 449
Query: 175 KMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
I PPS +LH N PP +TE +
Sbjct: 450 NSKNFQNIYPPSHVLHLSNIPPSVTENDI 478
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++QMGD AE A+ L +L GKRL V YSK + G+++ ++ S
Sbjct: 293 LIQMGDGFQAELAVHFLKGAMLF-GKRLEVNYSKHA---------NITQGADT-HEYVNS 341
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITE 200
NRF + A KN P++++H P DITE
Sbjct: 342 NLNRF--NRNAAKNYRYCCSPTKMVHLSTLPQDITE 375
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFT 164
++Q+ D A+ AM +L+ + GK + V SK V+ P E D KDF+
Sbjct: 369 SALIQLSDGNQAQLAMSHLNGQKVF-GKVMRVTLSKH---QTVALPREGLDDQLLTKDFS 424
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
GS +RF P I PPS LH N + E+ L
Sbjct: 425 GSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDL 463
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
+V+M D L AE A+ L ++L GK+L V YSK ++ PD D+ S
Sbjct: 383 LVEMADGLQAELAVHYLKGSILF-GKKLEVNYSKYPNITPA------PDA----HDYLNS 431
Query: 167 RKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
NRF + + P++++H P DI+EE + +
Sbjct: 432 SINRFNSNVVKNYRHCCSPTKMIHISALPQDISEEAILN 470
>gi|226489713|emb|CAX75007.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 583
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSD--VSHPYELPDGSESFK--- 161
+VQ D+ A RA+ L+ L GK + SK F++ + PDG K
Sbjct: 421 LVQFTDSTQALRAVNFLNGVSLY-GKIIRCVLSKNSFINMPPTNLQNLTPDGENEIKTTC 479
Query: 162 DFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
D+TG + +RF I PS++LH N P I+++ L +
Sbjct: 480 DYTGHKLHRFRRANSRNHFNICAPSKVLHITNLPESISDDTLKSV 524
>gi|358332176|dbj|GAA36554.2| polypyrimidine tract-binding protein 1 [Clonorchis sinensis]
Length = 543
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 131 GKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLH 190
GK L +A S+ + V P E D + KD+ S +RF P I PS +LH
Sbjct: 433 GKPLKIAVSR---FNVVQMPKEDTDVGLT-KDYANSPLHRFRKPHSKNFQNIYAPSNVLH 488
Query: 191 FFNAPPDITEEQL 203
N PP+ITEE++
Sbjct: 489 LSNIPPNITEEEI 501
>gi|4929470|gb|AAD34009.1|AF148690_1 RNA-binding protein XlhnRNPL [Xenopus laevis]
Length = 273
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 2 SAPTKLNVYKNDSESWDYTQPTLGRTKD--GPPS---RPGPLLPEPPRRLPTP 49
+ P++LNV+KND ++WDYT P L D G P+ R PLL + P P
Sbjct: 218 AKPSRLNVFKNDQDTWDYTNPCLSGQGDLGGNPNKRQRNPPLLGDHPAEYGGP 270
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L ++L GK+L V YSK ++ PD D+
Sbjct: 297 ALVEMADGLQAELAVHYLKGSILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 345
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P DI+EE + +
Sbjct: 346 SSINRFNSNVVKNYRHCCSPTKMIHISALPQDISEEAILN 385
>gi|402576971|gb|EJW70928.1| hypothetical protein WUBG_18168, partial [Wuchereria bancrofti]
Length = 69
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
+D++ S +RF P I PPS LH N PP+ITEE LT+
Sbjct: 8 RDYSQSSLHRFKKPGSKNYLNIYPPSSTLHLSNIPPNITEEFLTN 52
>gi|340375987|ref|XP_003386515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Amphimedon queenslandica]
Length = 449
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 170 RFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
+F+ + KNRI P ++HF+N+PPD TE++L +
Sbjct: 362 KFLTAEGTSKNRIVGPGAIMHFYNSPPDSTEDKLKAV 398
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFT 164
++QM + A AM +L K + N K + V SK V P E PD + +D+
Sbjct: 385 ALIQMAEPHQAYLAMTHLDKLRIWN-KTIRVMASKH---QAVQLPKEGQPDAGLT-RDYA 439
Query: 165 GSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
+ +RF P I PPS LH N P +TEE++ +
Sbjct: 440 QNPLHRFKKPGSKNYQNIYPPSATLHLSNIPATVTEEEIKE 480
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 99 PSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSE 158
P P G + T++A AM +L+ L +GK + + SK V P E +
Sbjct: 293 PDLPSGDSQPSLDQTMAAAFAMSHLNGHKL-HGKSVRITLSKH---QSVQLPREGQEDQG 348
Query: 159 SFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
KD+ S +RF P I PPS LH N PP ++E+ L +
Sbjct: 349 LTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 396
>gi|256077460|ref|XP_002575022.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360043943|emb|CCD81489.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 597
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 495 KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 537
>gi|226472642|emb|CAX71007.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 520 KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 562
>gi|226472640|emb|CAX71006.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 596
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 494 KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 536
>gi|56755920|gb|AAW26138.1| unknown [Schistosoma japonicum]
Length = 219
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 105 CCMVQMGDTLSAERAMGNLSKTLLCNGKRL-----AVAYSKQVFLSDVSHPYELPDGSES 159
++Q D A A+ NG+RL +A S+ + V P E + +
Sbjct: 66 TALIQFTDPHQALTALQ------FLNGQRLWDKPMKIAVSRH---NIVQLPKEDTENGLT 116
Query: 160 FKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 117 -KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 159
>gi|226468146|emb|CAX76300.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 520 KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 562
>gi|226468148|emb|CAX76301.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 610
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 508 KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 550
>gi|258623638|ref|ZP_05718628.1| cobyric acid synthase [Vibrio mimicus VM573]
gi|258584073|gb|EEW08832.1| cobyric acid synthase [Vibrio mimicus VM573]
Length = 411
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 84 VLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA-----VAY 138
+L K++ P G+ G EG + M L+AE+ + N+ TL+ +G+ + +
Sbjct: 262 MLGKWVHDPLGIEGDAGSSEGLGLFAMETELTAEKRLTNVQGTLMLDGQEVIAQGYEIHA 321
Query: 139 SKQVFLSDVSHPYELPDGS 157
+ + D P L DGS
Sbjct: 322 GRSTWAEDQKSPILLSDGS 340
>gi|326428995|gb|EGD74565.1| hypothetical protein PTSG_05929 [Salpingoeca sp. ATCC 50818]
Length = 554
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 103 EGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKD 162
+G M Q D L +++ + + + G+R+ + YS+ L++ LP G + +D
Sbjct: 324 DGMAMAQFED-LDQAKSVLEMLEGVEVQGQRIELGYSRNQELTESPAEVTLPSGLPAMED 382
Query: 163 FTGSRKN--RFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDISG 208
F ++K+ RF + K + P+ L F++ P + +++ + I G
Sbjct: 383 FRDAQKHHMRFKDGKPEPGLEVSKPTATLKFYDVPDNFSKDDVNKILG 430
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFTG 165
++QM + A AM ++ K L GK + V SK V P E PD + +D++
Sbjct: 468 LIQMAEPHQAHLAMTHMDK-LRVFGKAMRVMLSKH---QTVQLPKEGQPDAGLT-RDYSQ 522
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P +TE+ + +
Sbjct: 523 SPLHRFKKPGSKNYQNIYPPSATLHLSNIPATVTEDDIKE 562
>gi|262173940|ref|ZP_06041617.1| cobyric acid synthase [Vibrio mimicus MB-451]
gi|261891298|gb|EEY37285.1| cobyric acid synthase [Vibrio mimicus MB-451]
Length = 487
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 84 VLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA-----VAY 138
+L K++ P G+ G EG + M L+AE+ + N+ TL+ +G+ + +
Sbjct: 338 MLGKWVHDPLGIEGEAGSSEGLGLFAMETELTAEKRLTNVQGTLMLDGQEVIAQGYEIHA 397
Query: 139 SKQVFLSDVSHPYELPDGS 157
+ + D P L DGS
Sbjct: 398 GRSTWAEDQKSPILLSDGS 416
>gi|262403774|ref|ZP_06080332.1| cobyric acid synthase [Vibrio sp. RC586]
gi|262350278|gb|EEY99413.1| cobyric acid synthase [Vibrio sp. RC586]
Length = 487
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 84 VLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA-----VAY 138
+L K++ P G+ G EG + M L+AE+ + N+ TL+ +G+ + +
Sbjct: 338 MLGKWVHDPLGIEGEAGSSEGLGLFAMETELTAEKRLTNVQGTLMLDGQEVIAQGYEIHA 397
Query: 139 SKQVFLSDVSHPYELPDGS 157
+ + D P L DGS
Sbjct: 398 GRSTWAEDQKSPILLSDGS 416
>gi|262164913|ref|ZP_06032651.1| cobyric acid synthase [Vibrio mimicus VM223]
gi|262027293|gb|EEY45960.1| cobyric acid synthase [Vibrio mimicus VM223]
Length = 487
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 84 VLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA-----VAY 138
+L K++ P G+ G EG + M L+AE+ + N+ TL+ +G+ + +
Sbjct: 338 MLGKWVHDPLGIEGDAGSSEGLGLFAMETELTAEKRLTNVQGTLMLDGQEVIAQGYEIHA 397
Query: 139 SKQVFLSDVSHPYELPDGS 157
+ + D P L DGS
Sbjct: 398 GRSTWAEDQKSPILLSDGS 416
>gi|424809114|ref|ZP_18234499.1| cobyric acid synthase CobQ [Vibrio mimicus SX-4]
gi|342323539|gb|EGU19323.1| cobyric acid synthase CobQ [Vibrio mimicus SX-4]
Length = 487
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 84 VLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRLA-----VAY 138
+L K++ P G+ G EG + M L+AE+ + N+ TL+ +G+ + +
Sbjct: 338 MLGKWVHDPLGIEGDAGSSEGLGLFAMETELTAEKRLTNVQGTLMLDGQEVIAQGYEIHA 397
Query: 139 SKQVFLSDVSHPYELPDGS 157
+ + D P L DGS
Sbjct: 398 GRSTWAEDQKSPILLSDGS 416
>gi|168012956|ref|XP_001759167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689480|gb|EDQ75851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
++QMGD AE A L L GKR+ V +SK ++ PD S DF+
Sbjct: 263 ALIQMGDGFQAELAFNYLKGVTLF-GKRMDVNFSKHAQINPS------PDTS----DFSS 311
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLT 204
S NRF P++++H + P DI E +T
Sbjct: 312 SPLNRFNRNAAKNYRYCCAPTKMIHVSSLPADIALEDIT 350
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFTG 165
+VQ+ + A A+ ++ K L GK + V SK V P E PD + KD++
Sbjct: 723 LVQLAEPHQAHLAITHMDK-LKVFGKTIRVMLSKH---QSVQMPKEGQPDAGLT-KDYSQ 777
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P I E+ + +
Sbjct: 778 SPLHRFKKPGSKNYQNIYPPSSTLHLSNIPATINEDDIKE 817
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYE-LPDGSESFKDFTG 165
+VQ+ + A A+ ++ K L GK + V SK V P E PD + KD++
Sbjct: 669 LVQLAEPHQAHLAITHMDK-LKVFGKTIRVMLSKH---QSVQMPKEGQPDAGLT-KDYSQ 723
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S +RF P I PPS LH N P I E+ + +
Sbjct: 724 SPLHRFKKPGSKNYQNIYPPSSTLHLSNIPATINEDDIKE 763
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 111 GDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNR 170
G T +A AM +L+ L +GK + + SK +V P E + KD+ S +R
Sbjct: 410 GHTGAAPPAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGNSPLHR 465
Query: 171 FMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
F P I PPS LH N PP ++EE L
Sbjct: 466 FKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 498
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+VQM D A+ AM +L+ L +GK + + +V P E + KD+
Sbjct: 384 ALVQMADGNQAQLAMSHLNWHKL-HGKPPHLIRITPLKHQNVQLPREGREDQGLTKDYGN 442
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDIS 207
S +RF P I PPS +H N PP ++EE L +S
Sbjct: 443 SPLHRFKKPGFKNFQNIFPPSATVHLSNIPPSVSEEDLKVLS 484
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L +L GK+L V YSK ++ PD D+
Sbjct: 250 ALVEMADGLQAELAVHYLKGAILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 298
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P +I+EE + +
Sbjct: 299 SSLNRFNSNMVKNYRHCCSPTKMIHISALPQEISEEAILN 338
>gi|56755978|gb|AAW26167.1| SJCHGC00591 protein [Schistosoma japonicum]
Length = 160
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 101 GPEGCCMVQMGDTLSAERAMGNLSKTLLCNGKRL-----AVAYSKQVFLSDVSHPYELPD 155
+ ++Q D A A+ NG+RL +A S+ + V P E +
Sbjct: 3 NKKDTALIQFTDPHQALTALQ------FLNGQRLWDKPMKIAVSRH---NIVQLPKEDTE 53
Query: 156 GSESFKDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
+ KD+T S +RF P I PPS +LH N PP +TE +
Sbjct: 54 NGLT-KDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDI 100
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 111 GDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNR 170
G T +A AM +L+ L +GK + + SK +V P E + KD+ S +R
Sbjct: 403 GHTGAAPPAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGNSPLHR 458
Query: 171 FMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
F P I PPS LH N PP ++EE L
Sbjct: 459 FKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 491
>gi|375137732|ref|YP_004998381.1| multidrug ABC transporter ATPase [Mycobacterium rhodesiae NBB3]
gi|359818353|gb|AEV71166.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium rhodesiae NBB3]
Length = 887
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 16 SWDYTQPTLGRTKDGPPSRPGPLLPEPPRRLPTPSGPPSMPNYRGGYPDDDYYGAP--PA 73
SW P+ P SRP +PP P P GP + P+ P Y AP PA
Sbjct: 126 SWPTQGPSHPPQASAPISRPQM---QPPPTGPRPQGPSAYPS----APQPRYPSAPQQPA 178
Query: 74 FEFERSYNSPVLDKFIGKPRGMSGPPSGPEGCCMVQMGDTLSAERAMGNLSKTLL 128
+ ++PV +P +S P S P + MG T + GNL+ ++L
Sbjct: 179 ARGQAYPSAPV------RPPQISQPISQPALESVTAMGPTAAPRAPEGNLATSML 227
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 107 MVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGS 166
++QMGD AE A L L GKR+ V +SK ++ PD S DF+ S
Sbjct: 295 LIQMGDGFQAELAFNYLKGVTLF-GKRMDVNFSKHAQINPS------PDTS----DFSSS 343
Query: 167 RKNRFMNPKMAMKNR--IQPPSQLLHFFNAPPDITEEQLT 204
NRF + A KN P++++H + P DI E +T
Sbjct: 344 PLNRF--NRNAAKNYRYCCAPTKMIHVSSLPADIALEDIT 381
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L +L GK+L V YSK ++ PD D+
Sbjct: 297 ALVEMADGLQAELAVHYLKGAILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 345
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P +I+EE + +
Sbjct: 346 SSLNRFNSNMVKNYRHCCSPTKMIHISALPQEISEEAILN 385
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L +L GK+L V YSK ++ PD D+
Sbjct: 297 ALVEMADGLQAELAVHYLKGAILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 345
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P +I+EE + +
Sbjct: 346 SSLNRFNSNVVKNYRHCCSPTKMIHISALPQEISEEAILN 385
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L +L GK+L V YSK ++ PD D+
Sbjct: 297 ALVEMADGLQAELAVHYLKGAILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 345
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P +I+EE + +
Sbjct: 346 SSLNRFNSNMVKNYRHCCSPTKMIHISALPQEISEEAILN 385
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 106 CMVQMGDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTG 165
+V+M D L AE A+ L +L GK+L V YSK ++ PD D+
Sbjct: 298 ALVEMADGLQAELAVHYLKGAILF-GKKLEVNYSKYPNITPA------PDA----HDYLN 346
Query: 166 SRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTD 205
S NRF + + P++++H P +I+EE + +
Sbjct: 347 SSLNRFNSNMVKNYRHCCSPTKMIHISALPQEISEEAILN 386
>gi|226487300|emb|CAX75515.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
gi|226487302|emb|CAX75516.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 603
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQLTDI 206
KD+T S +RF P + I P+ +LH N P DITEE++ I
Sbjct: 500 KDYTNSPLHRFRKPNSKNFSNIYAPNHVLHLSNIPSDITEEEVRMI 545
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 111 GDTLSAERAMGNLSKTLLCNGKRLAVAYSKQVFLSDVSHPYELPDGSESFKDFTGSRKNR 170
G T +A AM +L+ L +GK + + SK +V P E + KD+ S +R
Sbjct: 384 GHTGAAPPAMSHLNGHKL-HGKPIRITLSKH---QNVQLPREGQEDQGLTKDYGNSPLHR 439
Query: 171 FMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
F P I PPS LH N PP ++EE L
Sbjct: 440 FKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 472
>gi|226487296|emb|CAX75513.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 571
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 161 KDFTGSRKNRFMNPKMAMKNRIQPPSQLLHFFNAPPDITEEQL 203
KD+T S +RF P + I P+ +LH N P DITEE++
Sbjct: 468 KDYTNSPLHRFRKPNSKNFSNIYAPNHVLHLSNIPSDITEEEV 510
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,237,310,314
Number of Sequences: 23463169
Number of extensions: 218668743
Number of successful extensions: 757611
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 1407
Number of HSP's that attempted gapping in prelim test: 743637
Number of HSP's gapped (non-prelim): 13655
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)