RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17779
(141 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 57.4 bits (138), Expect = 6e-13
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
++ Y C CGKSFT + RH +H GLRPY C CGKKF K HL H++ H
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 39.7 bits (92), Expect = 3e-06
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
K + C C +F++ Q H+ +H G RPY C CGK F L H +IH
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIH 53
Score = 27.7 bits (61), Expect = 0.11
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY 125
+ YPC CGK F K +H+ H Y
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY 31
Score = 26.6 bits (58), Expect = 0.33
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 23 KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIH 61
KS + + + + C C F L GH++IH
Sbjct: 15 KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 52.2 bits (126), Expect = 4e-11
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Query: 60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
IH+GE+PY C CGK+F+R+ L +H+R+H+G
Sbjct: 1 IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTG 32
Score = 47.6 bits (114), Expect = 2e-09
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
IHSG +PY C CGK F R L +H R H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 35.3 bits (82), Expect = 9e-05
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
K + C C AFS + L H R+HTGE
Sbjct: 6 KPYGCVECGKAFSRSSILVQHQRVHTGE 33
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 50.9 bits (122), Expect = 1e-10
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
G R TG +P++C +C +SF+R++ L H++ H
Sbjct: 1 GSTRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRH 34
Score = 47.4 bits (113), Expect = 3e-09
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
R +G++P+ C C + F R DHL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 26.2 bits (58), Expect = 0.24
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTG 63
K F CP C+ +FS + L H + H
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRKRHML 36
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 49.2 bits (118), Expect = 5e-10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+RPY CD C K+F RN +L RHK+ H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 38.1 bits (89), Expect = 9e-06
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
RPY C H C K F R L +H ++H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 31.1 bits (71), Expect = 0.004
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
RP + P C+ AF N L H + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 48.9 bits (117), Expect = 8e-10
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
R HTGE+PY C +C K+F + + L H + +
Sbjct: 1 RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD 33
Score = 47.0 bits (112), Expect = 5e-09
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
R H+G +PY C+HC K F +K L H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 31.2 bits (71), Expect = 0.004
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
K + C HC+ F L H + +
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHDP 34
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 47.3 bits (113), Expect = 3e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
RPY C E+C + F+R+ +LTRH RIH+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 36.5 bits (85), Expect = 3e-05
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
RPY C C ++F R L +H+R H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 30.8 bits (70), Expect = 0.005
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTG 63
RP C+ FS + L HIRIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 47.1 bits (112), Expect = 3e-09
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
R YKC + CGKSF+ + +L++H+R H+G
Sbjct: 3 SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTG 37
Score = 46.7 bits (111), Expect = 6e-09
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
R + R Y C CGK F L KH RTH
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 32.1 bits (73), Expect = 0.002
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
+++ C C +FS++ L H R HTGE
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 47.0 bits (112), Expect = 3e-09
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 67 YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
+ C CGKSF + L H ++HS R Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 42.8 bits (101), Expect = 2e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 40 NCPHCNVAFSNNGQLKGHIRIHTGERPYKCD 70
P C +F+ LK H+++H+ R Y C+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 30.8 bits (70), Expect = 0.005
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 97 YPCTH--CGKKFGRKDHLKKHLRTH 119
+ C CGK F K HLK+H++ H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLH 26
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 46.9 bits (112), Expect = 4e-09
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+P+KC E C KS++R E L H R H+G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 36.9 bits (86), Expect = 2e-05
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
+P+ CT C K + R ++LK HLR+H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 33.8 bits (78), Expect = 4e-04
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
+P K C ++S LK H+R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 46.2 bits (110), Expect = 7e-09
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
RP+ C CGK FTR++EL RHKR H+G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 36.9 bits (86), Expect = 3e-05
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
RP+ CT CGK+F R D L++H RTH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 36.1 bits (84), Expect = 6e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
RP +C F+ + +L+ H R HTGE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.1 bits (110), Expect = 8e-09
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHK-RIHSG 93
R H+GE+PY+C C FT++ + H + H+
Sbjct: 1 RTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTE 34
Score = 45.4 bits (108), Expect = 2e-08
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
R HSG +PY C C +F + +K H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 28.8 bits (65), Expect = 0.030
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHI-RIHTGE 64
K + C C+ F+ +G +K HI + HT
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKHTEN 35
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 44.9 bits (106), Expect = 3e-08
Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 52 GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
G + +++ ++ ++C C K+F R + H + H
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 33.4 bits (76), Expect = 9e-04
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 24 SHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
S ++ +K + + P C F ++ HI+ H +R
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 31.1 bits (70), Expect = 0.005
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 79 TRNEELTRHKRIHSGLRPYPCTHC--GKKFGRKDHLKKHLRTH 119
T + + C K F R+ +++ H++TH
Sbjct: 1 TLPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 44.6 bits (106), Expect = 4e-08
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIR-IHTGERPYKCD 70
K + C C FS L GHI+ +HT ERP+KC
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 44.2 bits (105), Expect = 5e-08
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 62 TGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPYPC 99
+ +PY C ++CGK F+R + L H K++H+ RP+ C
Sbjct: 1 SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 35.4 bits (82), Expect = 1e-04
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 92 SGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
S +PY C CGK F R DHL H++
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQV 28
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 44.3 bits (105), Expect = 4e-08
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHS 92
RPY C + C K F ++ L H H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 38.1 bits (89), Expect = 8e-06
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
RPY C C KKF + +LK H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 28.1 bits (63), Expect = 0.051
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 37 KKFNCPH--CNVAFSNNGQLKGHIRIHT 62
+ + CP CN F+ + LK HI H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 43.9 bits (104), Expect = 5e-08
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+P++C E CGK F+ + L H RIH+G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 34.7 bits (80), Expect = 2e-04
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
+P+ CT CGK+F +L+ H+R H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 31.2 bits (71), Expect = 0.004
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
+P + C FS + L+ H+RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 35
Score = 43.2 bits (102), Expect = 1e-07
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+G+RP+ C C +FT RH ++H+
Sbjct: 2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTD 32
Score = 41.3 bits (97), Expect = 6e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
SG RP+ C C F K + +HL+ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (67), Expect = 0.013
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
+ F C C AF+ H+++HT
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDT 33
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 42.2 bits (100), Expect = 2e-07
Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
++P++C C ++F+R++ LT H R H+G
Sbjct: 1 QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28
Score = 39.9 bits (94), Expect = 2e-06
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
+P+ C C + F R DHL H+RTH
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 33.4 bits (77), Expect = 5e-04
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTG 63
K F C C FS + L HIR HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 41.5 bits (98), Expect = 5e-07
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
R + C C + F R++HLK+H R+H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 39.9 bits (94), Expect = 2e-06
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
R + C E C ++F R E L RH R H+
Sbjct: 1 RSFVC--EVCTRAFARQEHLKRHYRSHTN 27
Score = 37.2 bits (87), Expect = 2e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
+ F C C AF+ LK H R HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 38.0 bits (89), Expect = 1e-05
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHS 92
+PYKC CGK+F++N L H+RIH+
Sbjct: 1 KPYKC--LECGKAFSQNSGLINHQRIHT 26
Score = 36.4 bits (85), Expect = 3e-05
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
+PY C CGK F + L H R H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 27.9 bits (63), Expect = 0.047
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHT 62
K + C C AFS N L H RIHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 37.7 bits (88), Expect = 1e-05
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
+ + C C K+F R DHL KH++TH
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 36.2 bits (84), Expect = 5e-05
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+ + C C K F R++ L++H + H
Sbjct: 1 KKFAC--PECPKRFMRSDHLSKHIKTHQN 27
Score = 35.8 bits (83), Expect = 8e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
KKF CP C F + L HI+ H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 33.3 bits (76), Expect = 5e-04
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIH 91
E+P+ CD CG+ F R++E RH +IH
Sbjct: 1 EKPFACDI--CGRKFARSDERKRHTKIH 26
Score = 32.9 bits (75), Expect = 9e-04
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTHF 120
+P+ C CG+KF R D K+H + H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHL 27
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 33.3 bits (76), Expect = 7e-04
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIH 91
++P+ C A CG+ FT + L HK H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
Score = 25.2 bits (55), Expect = 0.54
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
+P+ CT CG++F +DHL H H
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 29.8 bits (67), Expect = 0.009
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 38 KFNCPHCNVAFSNNGQLKGHIRIHTGER 65
K+ C C + LK HIR HT R
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 24.8 bits (54), Expect = 0.63
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 97 YPCTHCGKKFGRKDHLKKHLRTH 119
Y C CG + + LKKH+RTH
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTH 24
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 29.7 bits (66), Expect = 0.013
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 96 PYPCTHCGKKFGRKDHLKKHLRTH 119
P+ C CGK F RKD LK H+R H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 26.6 bits (58), Expect = 0.18
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 66 PYKCDAENCGKSFTRNEELTRHKRIHSG 93
P+KC+ CGK F+R ++L H R H+G
Sbjct: 1 PHKCEV--CGKCFSRKDKLKTHMRCHTG 26
Score = 25.0 bits (54), Expect = 0.68
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 41 CPHCNVAFSNNGQLKGHIRIHTG 63
C C FS +LK H+R HTG
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 29.7 bits (67), Expect = 0.016
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
P+ + C C F + L GH+ +H +R
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 29.3 bits (65), Expect = 0.018
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHS 92
+ PY+C E C K F+ L RH+++H+
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVHA 29
Score = 23.1 bits (49), Expect = 2.9
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 96 PYPCTH--CGKKFGRKDHLKKHLRTH 119
PY C H C K+F LK+H + H
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVH 28
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 28.9 bits (64), Expect = 0.027
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
+PY C CG +F RKD + H+R+H
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 23.8 bits (51), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
E+PY C CG F R + ++ H R H G
Sbjct: 1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG 28
Score = 23.5 bits (50), Expect = 2.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTG 63
K ++CP C + F ++ H+R H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 28.5 bits (63), Expect = 0.033
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+P+ C E C K FT LTRH H+G
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG 29
Score = 23.9 bits (51), Expect = 1.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 95 RPYPCTH--CGKKFGRKDHLKKHLRTH 119
+P+PC C K F HL +H TH
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTH 27
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 28.6 bits (63), Expect = 0.041
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 92 SGLRPYPCTHCGKKFGRKDHLKKH 115
+G++PY C C K+F +D +H
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRH 24
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 27.9 bits (62), Expect = 0.051
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
+PY C C K +T L +H + G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 27.1 bits (60), Expect = 0.13
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 96 PYPCTHCGKKFGRKDHLKKH 115
PYPC C + F R+D L +H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRH 20
Score = 22.5 bits (48), Expect = 5.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 66 PYKCDAENCGKSFTRNEELTRH-KRIHSGL 94
PY C C ++FTR + L RH ++IHSG
Sbjct: 1 PYPCGL--CNRAFTRRDLLIRHAQKIHSGN 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 26.9 bits (59), Expect = 0.16
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 72 ENCGKSFTRNEELTRHKRIHSGLRPY 97
E CGK F L RHK HSG +PY
Sbjct: 9 EICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.9 bits (51), Expect = 1.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPY 67
K+ C C F + L H H+GE+PY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 26.5 bits (58), Expect = 0.19
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 97 YPCTHCGKKFGRKDHLKKHLR 117
YPC C K+F RKD++ H++
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVK 22
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 26.4 bits (58), Expect = 0.21
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 65 RPYKCDAENCGKSFTRNEELTRH-KRIHS 92
+PY C+ E C K+F+ + +H R HS
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS 29
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.1 bits (57), Expect = 0.24
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 74 CGKSFTRNEELTRHKRIHSG 93
CGK+F + +L RH+ +H+G
Sbjct: 8 CGKAFVESSKLKRHQLVHTG 27
Score = 25.4 bits (55), Expect = 0.47
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 41 CPHCNVAFSNNGQLKGHIRIHTGE 64
C C AF + +LK H +HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 23.4 bits (50), Expect = 2.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
R + C CGK F LK+H H
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVH 25
>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate
dehydratase {Fungus (Filobasidiella neoformans) [TaxId:
5207]}
Length = 94
Score = 27.1 bits (60), Expect = 0.32
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 21 YFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTR 80
YF H + K H +F+ + HI GE + AE+ K+
Sbjct: 28 YFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDSIRGENNHHI-AESAFKALAL 86
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.8 bits (56), Expect = 0.33
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
+ F C C A N+ QL H+R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 27.2 bits (60), Expect = 0.66
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 97 YPCTHCGKKFGRKDHLKKHLRTH 119
Y C CG K+ ++L+ HLR H
Sbjct: 147 YKCEECG-KYVDIENLEAHLREH 168
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.7 bits (53), Expect = 0.76
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHT 62
K + C C+ A +++ L H+RIH+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 24.7 bits (53), Expect = 0.96
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 94 LRPYPCTHCGKKFGRKDHLKKHLRTH 119
++PY C C L KHLR H
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIH 26
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 24.3 bits (52), Expect = 1.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 67 YKCDAENCGKSFTRNEELTRHKRIHS 92
Y C ENCGK+F ++ +L H+ H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 25.4 bits (55), Expect = 1.1
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 97 YPCTHCGKKFGRKDHLKKHLRTH 119
Y C HC K L HL H
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIH 41
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 24.2 bits (52), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 37 KKFNC--PHCNVAFSNNGQLKGHIRIHTGE 64
K++ C C A++ N +L+ H+ HTGE
Sbjct: 2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor,
different fingers {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 36
Score = 23.9 bits (51), Expect = 1.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
+P +F C C +AFS+ L+ H + R
Sbjct: 5 KPARFMCLPCGIAFSSPSTLEAHQAYYCSHR 35
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 24.7 bits (54), Expect = 1.7
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 38 KFNCPHCNVAFSNNGQLKGHIR 59
C C F ++ LK H R
Sbjct: 15 LHRCLACARYFIDSTNLKTHFR 36
Score = 23.9 bits (52), Expect = 3.1
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 93 GLRPYPCTHCGKKFGRKDHLKKHLRT 118
G + C C + F +LK H R+
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRS 37
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 24.6 bits (53), Expect = 1.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 97 YPCTHCGKKFGRKDHLKKHLRTH 119
PC CGK F + L++H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1zupa1 c.55.3.11 (A:1-301) Hypothetical protein TM1739 {Thermotoga
maritima [TaxId: 2336]}
Length = 301
Score = 26.0 bits (57), Expect = 1.8
Identities = 3/18 (16%), Positives = 9/18 (50%)
Query: 110 DHLKKHLRTHFPQPRYVS 127
L+++L + Y++
Sbjct: 277 QFLEENLSYYLTDKNYMN 294
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 25.8 bits (55), Expect = 1.9
Identities = 22/112 (19%), Positives = 33/112 (29%), Gaps = 12/112 (10%)
Query: 32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERP-------YKCDAENCGKSFTRNEEL 84
KNQ +C C AFS ++G I+I TG CD + G +
Sbjct: 17 KNQG----SCGSC-WAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSA 71
Query: 85 TRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGY 136
+ + + G + + K R V Y Y
Sbjct: 72 LQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLY 123
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 23.5 bits (50), Expect = 2.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 41 CPHCNVAFSNNGQLKGHIRIHTGER 65
CP C+ F + LK H R HTGE+
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 85
Score = 24.7 bits (54), Expect = 2.1
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 30 KAKNQRPKKFNCPHCN 45
K +F CP CN
Sbjct: 15 KMTGTLETQFTCPFCN 30
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 23.5 bits (50), Expect = 2.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 39 FNCPHCNVAFSNNGQLKGHIRIHTGE 64
F C C F +L+ H+ HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 23.4 bits (50), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 96 PYPCTHCGKKFGRKDHLKKHLRT 118
PY CT+C F K +L KH+++
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKS 23
Score = 21.9 bits (46), Expect = 8.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 39 FNCPHCNVAFSNNGQLKGHIR 59
++C +CN +F G L H++
Sbjct: 2 YHCTYCNFSFKTKGNLTKHMK 22
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 23.5 bits (50), Expect = 2.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 97 YPCTHCGKKFGRKDHLKKH 115
+ C+ CGK F R++ + +H
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
Score = 23.1 bits (49), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 74 CGKSFTRNEELTRH 87
CGK+FTR + RH
Sbjct: 10 CGKTFTRRNTMARH 23
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.2 bits (49), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 67 YKCDAENCGKSFTRNEELTRHKRIH 91
YKC C +SF L+RH+R+H
Sbjct: 1 YKCGL--CERSFVEKSALSRHQRVH 23
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.1 bits (49), Expect = 3.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 38 KFNCPHCNVAFSNNGQLKGHIR 59
KF+CPHC+ + L H+R
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLR 23
Score = 23.1 bits (49), Expect = 3.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 97 YPCTHCGKKFGRKDHLKKHLR 117
+ C HC RK L HLR
Sbjct: 3 FHCPHCDTVIARKSDLGVHLR 23
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.0 bits (49), Expect = 3.4
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 98 PCTH--CGKKFGRKDHLKKHLRTHFP 121
C H C K F ++KHL TH P
Sbjct: 3 ACPHKGCTKMFRDNSAMRKHLHTHGP 28
>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 61
Score = 23.9 bits (51), Expect = 3.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKR 89
RPY+C + C +FT + L H +
Sbjct: 19 RPYRCVHQGCFAAFTIQQNLILHYQ 43
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 23.1 bits (49), Expect = 3.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 96 PYPCTHCGKKFGRKDHLKKH 115
P+ C CGK + RK++L +H
Sbjct: 1 PFECPKCGKCYFRKENLLEH 20
>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate
dehydratase {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 97
Score = 23.6 bits (51), Expect = 5.9
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 21 YFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTR 80
Y + + + H + N + HIR GE + E K+F R
Sbjct: 28 YLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGENSHHI-IEATFKAFAR 86
>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Bacteriophage T4 [TaxId: 10665]}
Length = 87
Score = 23.5 bits (50), Expect = 6.8
Identities = 13/84 (15%), Positives = 21/84 (25%), Gaps = 7/84 (8%)
Query: 36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
C C+ A L + + E LT+ R
Sbjct: 9 SNIHKCGPCDNAKR---LLTVKKQPFEFINIMPEKGVFDDE--KIAELLTKLGRDTQIGL 63
Query: 96 PYPCT--HCGKKFGRKDHLKKHLR 117
P G G D L+++ +
Sbjct: 64 TMPQVFAPDGSHIGGFDQLREYFK 87
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 22.0 bits (47), Expect = 8.0
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 40 NCPHCNVAFSNNGQLKGHIRIHTGE 64
C F L H+R HTGE
Sbjct: 9 GCSRELRPFKAQYMLVVHMRRHTGE 33
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 142
Score = 23.6 bits (51), Expect = 8.4
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 109 KDHLKKHLRTHFPQPRYVSCY 129
K + L FP PR++
Sbjct: 69 KLEAAELLVDRFPLPRFIDTE 89
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 22.0 bits (46), Expect = 8.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 41 CPHCNVAFSNNGQLKGHIRIH 61
C C+ + S+ L+ H RIH
Sbjct: 5 CSECSYSCSSKAALRIHERIH 25
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.469
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 578,981
Number of extensions: 26359
Number of successful extensions: 299
Number of sequences better than 10.0: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 179
Length of query: 141
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 64
Effective length of database: 1,350,386
Effective search space: 86424704
Effective search space used: 86424704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.0 bits)