BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1778
(66 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C8V1|ZXDC_MOUSE Zinc finger protein ZXDC OS=Mus musculus GN=Zxdc PE=2 SV=1
Length = 858
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CP+ CGKSF R+EHL+ H + H KP F CP + C + A+SSLY H K
Sbjct: 387 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSK 441
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CPL CG +F S L+ H+ H++ +P F+CP C + +L AH+K
Sbjct: 207 RPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRP-FSCPVGGCGKKFTTVYNLKAHMK 261
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
R F C +CG +F L H +H++++ +FTCP + C S+ L H
Sbjct: 357 RPFICDSDSCGWTFTSMSKLLRHKRKHDDDR-RFTCPVEGCGKSFTRAEHLKGH 409
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHN--ENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
CP C SF + L+ H+L H + + F CP C ++ L HL+
Sbjct: 178 CPEPQCALSFAKKHQLKVHLLTHGSLQGRRPFKCPLDGCGWAFTTSYKLKRHLQ 231
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC 37
+R F CP+ CGK F +L+ HM H E + F C
Sbjct: 236 LRPFSCPVGGCGKKFTTVYNLKAHMKGH-EQESLFKC 271
>sp|Q2QGD7|ZXDC_HUMAN Zinc finger protein ZXDC OS=Homo sapiens GN=ZXDC PE=1 SV=2
Length = 858
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVH 60
R F CP+ CGKSF R+EHL+ H + H KP F CP + C + A+SSLY H KHV
Sbjct: 386 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHVQ 444
Query: 61 STN 63
Sbjct: 445 DVG 447
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CPL CG +F S L+ H+ H++ +P F CP C + +L AH+K
Sbjct: 206 RPFKCPLEGCGWAFTTSYKLKRHLQSHDKLRP-FGCPVGGCGKKFTTVYNLKAHMK 260
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
R F C +CG +F L H +H++++ +FTCP + C S+ L H
Sbjct: 356 RPFICDSDSCGWTFTSMSKLLRHRRKHDDDR-RFTCPVEGCGKSFTRAEHLKGH 408
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPK--FTCPYQDCLMSYVAKSSLYAHLK 57
CP C +F + L+ H+L H + + F CP + C ++ L HL+
Sbjct: 177 CPEPQCALAFAKKHQLKVHLLTHGGGQGRRPFKCPLEGCGWAFTTSYKLKRHLQ 230
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC 37
+R F CP+ CGK F +L+ HM H E + F C
Sbjct: 235 LRPFGCPVGGCGKKFTTVYNLKAHMKGH-EQESLFKC 270
>sp|A2CE44|ZXDAB_MOUSE Zinc finger X-linked protein ZXDA/ZXDB OS=Mus musculus GN=Zxda PE=2
SV=1
Length = 873
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CP+ CGKSF R+EHL+ H + H KP F CP + C + A+SSLY H K
Sbjct: 551 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 605
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CPL CG +F S L+ H+ H++ +P F CP Q C S+ +L AH+K
Sbjct: 371 RPFKCPLSGCGWTFTTSYKLKRHLQSHDKLRP-FGCPVQGCGKSFTTVYNLKAHMK 425
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPK--FTCPYQDCLMSYVAKSSLYAHLK 57
++ CP CG++F + L+ H+L H+ ++ + F CP C ++ L HL+
Sbjct: 339 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSGCGWTFTTSYKLKRHLQ 395
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
R F C CG +F L H +H +++ +FTCP + C S+ L H
Sbjct: 521 RPFLCDFDGCGWNFTSMSKLLRHKRKHEDDR-RFTCPVEGCGKSFTRAEHLKGH 573
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+R F CP+ CGKSF +L+ HM H E + F C + C S+ ++ L H +
Sbjct: 400 LRPFGCPVQGCGKSFTTVYNLKAHMKGH-EQENSFKC--EVCEESFPTQAKLSTHQR 453
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST 62
+F C C K + ++ L+ H+ H +P F C + C ++ + S L H +
Sbjct: 492 LFACSFPGCSKQYDKACRLKIHLRSHTGERP-FLCDFDGCGWNFTSMSKLLRHKRKHEDD 550
Query: 63 NKIT 66
+ T
Sbjct: 551 RRFT 554
>sp|P98168|ZXDA_HUMAN Zinc finger X-linked protein ZXDA OS=Homo sapiens GN=ZXDA PE=1 SV=2
Length = 799
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CP+ CGKSF R+EHL+ H + H KP F CP C + A+SSLY H K
Sbjct: 478 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 532
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CPL CG +F S L+ H+ H++ +P F CP + C S+ +L AH+K
Sbjct: 298 RPFKCPLGGCGWTFTTSYKLKRHLQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMK 352
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPK--FTCPYQDCLMSYVAKSSLYAHLK 57
++ CP CG++F + L+ H+L H+ ++ + F CP C ++ L HL+
Sbjct: 266 LYLCPEALCGQTFAKKHQLKMHLLTHSSSQGQRPFKCPLGGCGWTFTTSYKLKRHLQ 322
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+R F CP CGKSF +L+ HM H E + F C + C S+ ++ L AH +
Sbjct: 327 LRPFGCPAEGCGKSFTTVYNLKAHMKGH-EQENSFKC--EVCEESFPTQAKLGAHQR 380
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST 62
+F C C K + ++ L+ H+ H +P F C + C ++ + S L H K H
Sbjct: 419 LFSCSFPGCSKQYDKACRLKIHLRSHTGERP-FLCDFDGCGWNFTSMSKLLRH-KRKHDD 476
Query: 63 NK 64
++
Sbjct: 477 DR 478
>sp|P98169|ZXDB_HUMAN Zinc finger X-linked protein ZXDB OS=Homo sapiens GN=ZXDB PE=2 SV=2
Length = 803
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CP+ CGKSF R+EHL+ H + H KP F CP C + A+SSLY H K
Sbjct: 482 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 536
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F CPL CG +F S L+ H+ H++ +P F CP + C S+ +L AH+K
Sbjct: 302 RPFKCPLGGCGWTFTTSYKLKRHLQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMK 356
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPK--FTCPYQDCLMSYVAKSSLYAHLK 57
++ CP CG++F + L+ H+L H+ ++ + F CP C ++ L HL+
Sbjct: 270 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGGCGWTFTTSYKLKRHLQ 326
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+R F CP CGKSF +L+ HM H E + F C + C S+ ++ L AH +
Sbjct: 331 LRPFGCPAEGCGKSFTTVYNLKAHMKGH-EQENSFKC--EVCEESFPTQAKLSAHQR 384
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+F C C K + ++ L+ H+ H +P F C + C ++ + S L H K H
Sbjct: 422 ELFSCSFPGCSKQYDKACRLKIHLRSHTGERP-FLCDFDGCGWNFTSMSKLLRH-KRKHD 479
Query: 62 TNK 64
++
Sbjct: 480 DDR 482
>sp|Q8JJC0|ZIC1_CHICK Zinc finger protein ZIC 1 OS=Gallus gallus GN=ZIC1 PE=1 SV=1
Length = 444
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+++
Sbjct: 299 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 356
Query: 64 K 64
K
Sbjct: 357 K 357
>sp|P46684|ZIC1_MOUSE Zinc finger protein ZIC 1 OS=Mus musculus GN=Zic1 PE=1 SV=2
Length = 447
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+++
Sbjct: 302 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 359
Query: 64 K 64
K
Sbjct: 360 K 360
>sp|Q15915|ZIC1_HUMAN Zinc finger protein ZIC 1 OS=Homo sapiens GN=ZIC1 PE=2 SV=2
Length = 447
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+++
Sbjct: 302 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 359
Query: 64 K 64
K
Sbjct: 360 K 360
>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2
Length = 532
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 331 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FQCEFEGCDRRFANSSDRKKHM-HVHT 388
Query: 62 TNK 64
++K
Sbjct: 389 SDK 391
>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis GN=zic1 PE=2 SV=1
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 296 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHT 353
Query: 62 TNK 64
++K
Sbjct: 354 SDK 356
>sp|Q62520|ZIC2_MOUSE Zinc finger protein ZIC 2 OS=Mus musculus GN=Zic2 PE=1 SV=2
Length = 530
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 331 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FQCEFEGCDRRFANSSDRKKHM-HVHT 388
Query: 62 TNK 64
++K
Sbjct: 389 SDK 391
>sp|Q62521|ZIC3_MOUSE Zinc finger protein ZIC 3 OS=Mus musculus GN=Zic3 PE=1 SV=2
Length = 466
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 325 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHT 382
Query: 62 TNK 64
++K
Sbjct: 383 SDK 385
>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1
Length = 497
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 348 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FQCEFEGCDRRFANSSDRKKHM-HVHT 405
Query: 62 TNK 64
++K
Sbjct: 406 SDK 408
>sp|O60481|ZIC3_HUMAN Zinc finger protein ZIC 3 OS=Homo sapiens GN=ZIC3 PE=1 SV=1
Length = 467
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 326 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHT 383
Query: 62 TNK 64
++K
Sbjct: 384 SDK 386
>sp|Q91689|ZIC2A_XENLA Zinc finger protein ZIC 2-A OS=Xenopus laevis GN=zic2-a PE=2 SV=2
Length = 503
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+
Sbjct: 352 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FQCEFEGCDRRFANSSDRKKHM-HVHT 409
Query: 62 TNK 64
++K
Sbjct: 410 SDK 412
>sp|Q6DJQ6|ZIC3_XENTR Zinc finger protein ZIC 3 OS=Xenopus tropicalis GN=zic3 PE=2 SV=1
Length = 441
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+++
Sbjct: 299 FPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 356
Query: 64 K 64
K
Sbjct: 357 K 357
>sp|O57311|ZIC3_XENLA Zinc finger protein ZIC 3 OS=Xenopus laevis GN=zic3 PE=2 SV=3
Length = 441
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H+ HVH+++
Sbjct: 299 FPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 356
Query: 64 K 64
K
Sbjct: 357 K 357
>sp|Q61467|ZIC4_MOUSE Zinc finger protein ZIC 4 OS=Mus musculus GN=Zic4 PE=1 SV=2
Length = 341
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C ++ C + S H HVH+++
Sbjct: 211 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FRCEFEGCERRFANSSDRKKH-SHVHTSD 268
Query: 64 K 64
K
Sbjct: 269 K 269
>sp|Q8N9L1|ZIC4_HUMAN Zinc finger protein ZIC 4 OS=Homo sapiens GN=ZIC4 PE=1 SV=3
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H HVH+
Sbjct: 202 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FRCEFEGCERRFANSSDRKKH-SHVHT 259
Query: 62 TNK 64
++K
Sbjct: 260 SDK 262
>sp|Q7TQ40|ZIC5_MOUSE Zinc finger protein ZIC 5 OS=Mus musculus GN=Zic5 PE=1 SV=1
Length = 622
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C + C + S H HVH+
Sbjct: 448 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFDGCDRKFANSSDRKKH-SHVHT 505
Query: 62 TNK 64
++K
Sbjct: 506 SDK 508
>sp|A0JC51|ZIC4_XENLA Zinc finger protein ZIC 4 OS=Xenopus laevis GN=zic4 PE=2 SV=1
Length = 530
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C ++ C + S H HVH+
Sbjct: 357 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKH-SHVHT 414
Query: 62 TNK 64
++K
Sbjct: 415 SDK 417
>sp|Q96T25|ZIC5_HUMAN Zinc finger protein ZIC 5 OS=Homo sapiens GN=ZIC5 PE=1 SV=2
Length = 663
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
+ FPCP CGK F RSE+L+ H H KP F C + C + S H HVH+
Sbjct: 489 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFDGCDRKFANSSDRKKH-SHVHT 546
Query: 62 TNK 64
++K
Sbjct: 547 SDK 549
>sp|Q5EAC5|ZN410_BOVIN Zinc finger protein 410 OS=Bos taurus GN=ZNF410 PE=2 SV=1
Length = 467
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F CP CGKSF + L+ HM HN KP F CP +C + +L HL+ +H+
Sbjct: 247 RSFICPAAGCGKSFYVLQRLKVHMRTHNGEKP-FVCPESNCGKQFTTAGNLKNHLR-IHT 304
Query: 62 TNK 64
K
Sbjct: 305 GEK 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
F CP CGK F + +L+ H+ H KP F C Q C S+ SSL HL VHS
Sbjct: 279 FVCPESNCGKQFTTAGNLKNHLRIHTGEKP-FLCEAQGCGRSFAEYSSLRKHLV-VHSGE 336
Query: 64 K 64
K
Sbjct: 337 K 337
>sp|Q9IB89|ZIC5_XENLA Zinc finger protein ZIC 5 OS=Xenopus laevis GN=zic5 PE=2 SV=1
Length = 515
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
FPCP CGK F RSE+L+ H H KP F C + C + S H HVH+++
Sbjct: 342 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFDGCDRKFANSSDRKKH-SHVHTSD 399
Query: 64 K 64
K
Sbjct: 400 K 400
>sp|Q92664|TF3A_HUMAN Transcription factor IIIA OS=Homo sapiens GN=GTF3A PE=1 SV=3
Length = 365
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C CGK+F+R HL H+L H KP F C C + KS+L H + H
Sbjct: 68 RPFVCDYEGCGKAFIRDYHLSRHILTHTGEKP-FVCAANGCDQKFNTKSNLKKHFERKHE 126
Query: 62 TNK 64
+
Sbjct: 127 NQQ 129
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
CP CG+++ +LQ H+L +E F C + C ++ K SL H
Sbjct: 248 CPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRH 297
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C K+F R ++L++HM H + CP + C +Y +L +H+ H ++
Sbjct: 222 CRKTFKRKDYLKQHMKTHAPERDVCRCPREGCGRTYTTVFNLQSHILSFHEESR 275
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ + C C K+F + + L+ H QH N+P F C + C + + S L H K
Sbjct: 129 QKQYICSFEDCKKTFKKHQQLKIHQCQHT-NEPLFKCTQEGCGKHFASPSKLKRHAK 184
>sp|Q8VHT8|TF3A_RAT Transcription factor IIIA OS=Rattus norvegicus GN=Gtf3a PE=2 SV=2
Length = 363
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH 60
R F C CGK+F+R HL H+L H KP F C C + KS+L H++ H
Sbjct: 66 RPFVCDYEGCGKAFIRDYHLSRHILIHTGEKP-FVCADNGCNQKFSTKSNLKKHIERKH 123
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 9 VTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C K F R +HL++HM H + + CP + C +Y +L +H+ H +
Sbjct: 218 TVCQKMFKRKDHLKQHMKTHAPERDVYRCPREGCARTYTTVFNLQSHILSFHEEKR 273
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
++ CP C +++ +LQ H+L +E K F C + C ++ K SL H
Sbjct: 243 VYRCPREGCARTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMKQSLMRH 295
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ + C C K+F + + L+ H QH N+P F C ++ C + + S L H K
Sbjct: 127 QKQYVCNFEGCKKAFKKHQQLRTHQCQHT-NEPLFRCTHEGCGKHFASPSRLKRHGK 182
>sp|Q8VHT7|TF3A_MOUSE Transcription factor IIIA OS=Mus musculus GN=Gtf3a PE=2 SV=2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C CGK+F+R HL H+L H KP F C C + KS+L H++ H
Sbjct: 66 RPFVCDYEGCGKAFIRDYHLSRHVLIHTGEKP-FVCADDGCNQKFNTKSNLKKHIERKHG 124
Query: 62 T 62
Sbjct: 125 N 125
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
++ CP CG+++ +LQ H+L +E K F C + C ++ K SL H
Sbjct: 243 VYRCPRQGCGRTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMKQSLMRH 295
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 10 TCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + F R ++L++HM H + + CP Q C +Y +L +H+ H +
Sbjct: 219 VCQRMFKRRDYLKQHMKTHAPERDVYRCPRQGCGRTYTTVFNLQSHILSFHEEKR 273
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ + C C K+F + + L+ H QH ++P F C ++ C + + S L H K
Sbjct: 128 KQYVCSYEGCKKAFKKHQQLRTHQCQHT-SEPLFRCTHEGCGKHFASPSRLKRHGK 182
>sp|O70494|SP3_MOUSE Transcription factor Sp3 OS=Mus musculus GN=Sp3 PE=1 SV=2
Length = 783
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 651 RPFICNWMFCGKRFTRSDELQRHRRTHTGEK-KFVCP--ECSKRFMRSDHLAKHIK-THQ 706
Query: 62 TNKI 65
K+
Sbjct: 707 NKKV 710
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H+ +P F C + C + L H + H+ K
Sbjct: 625 CHIPGCGKVYGKTSHLRAHLRWHSGERP-FICNWMFCGKRFTRSDELQRH-RRTHTGEK 681
>sp|P39768|OPA_DROME Pair-rule protein odd-paired OS=Drosophila melanogaster GN=opa PE=2
SV=2
Length = 609
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
F CP CGK F RSE+L+ H H KP F C ++ C + S H HVH+++
Sbjct: 291 FACPHPGCGKVFARSENLKIHKRTHTGEKP-FKCEHEGCDRRFANSSDRKKH-SHVHTSD 348
Query: 64 K 64
K
Sbjct: 349 K 349
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
F C C + F S ++H H +KP + C C SY SSL H+K
Sbjct: 321 FKCEHEGCDRRFANSSDRKKHSHVHTSDKP-YNCRINGCDKSYTHPSSLRKHMK 373
>sp|O95863|SNAI1_HUMAN Zinc finger protein SNAI1 OS=Homo sapiens GN=SNAI1 PE=1 SV=2
Length = 264
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
PC TCGK+F R LQ H+ H KP F+CP+ C ++ +S+L AHL+ HS
Sbjct: 178 LPCVCGTCGKAFSRPWLLQGHVRTHTGEKP-FSCPH--CSRAFADRSNLRAHLQ-THSDV 233
Query: 64 K 64
K
Sbjct: 234 K 234
>sp|Q90WR8|SP3_CHICK Transcription factor Sp3 OS=Gallus gallus GN=SP3 PE=1 SV=1
Length = 771
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 639 RPFVCNWMFCGKRFTRSDELQRHRRTHTGEK-KFVCP--ECSKRFMRSDHLAKHIK-THQ 694
Query: 62 TNK 64
K
Sbjct: 695 NKK 697
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H+ +P F C + C + L H + H+ K
Sbjct: 613 CHIPGCGKVYGKTSHLRAHLRWHSGERP-FVCNWMFCGKRFTRSDELQRH-RRTHTGEK 669
>sp|P34694|TF3A_ANAAE Transcription factor IIIA OS=Anaxyrus americanus GN=gtf3a PE=2
SV=1
Length = 339
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R FPC C K F+ HL H+L H KP C ++C +++ S++ H K HS
Sbjct: 40 RPFPCTYEGCEKGFVTLHHLNRHVLSHTGEKP-CKCETENCNLAFTTASNMRLHFKRAHS 98
Query: 62 T 62
+
Sbjct: 99 S 99
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL 56
C ++F R L+EH H E + + CP ++C +Y K +L +H+
Sbjct: 195 CNRTFKRKSFLKEHKKIHREERIVYRCPRENCDRTYTTKFNLKSHI 240
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL 56
++ CP C +++ +L+ H+L +EN F C ++ C ++ K SL H
Sbjct: 218 VYRCPRENCDRTYTTKFNLKSHILTFHENLRPFVCEHEGCGKTFAMKQSLDRHF 271
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL 56
+ F C C ++ ++ LQ H+ +H +P F C Y+ C +V L H+
Sbjct: 10 KRFICSFPDCNATYNKNRKLQAHLCKHTGERP-FPCTYEGCEKGFVTLHHLNRHV 63
>sp|P08047|SP1_HUMAN Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3
Length = 785
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 654 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK-KFACP--ECPKRFMRSDHLSKHIK-THQ 709
Query: 62 TNK 64
K
Sbjct: 710 NKK 712
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H +P F C + C + L H K H+ K
Sbjct: 628 CHIQGCGKVYGKTSHLRAHLRWHTGERP-FMCTWSYCGKRFTRSDELQRH-KRTHTGEK 684
>sp|Q02447|SP3_HUMAN Transcription factor Sp3 OS=Homo sapiens GN=SP3 PE=1 SV=3
Length = 781
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 649 RPFVCNWMYCGKRFTRSDELQRHRRTHTGEK-KFVCP--ECSKRFMRSDHLAKHIK-THQ 704
Query: 62 TNK 64
K
Sbjct: 705 NKK 707
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H+ +P F C + C + L H + H+ K
Sbjct: 623 CHIPGCGKVYGKTSHLRAHLRWHSGERP-FVCNWMYCGKRFTRSDELQRH-RRTHTGEK 679
>sp|Q01714|SP1_RAT Transcription factor Sp1 OS=Rattus norvegicus GN=Sp1 PE=1 SV=2
Length = 786
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 655 RPFMCNWSYCGKRFTRSDELQRHKRTHTGEK-KFACP--ECPKRFMRSDHLSKHIK-THQ 710
Query: 62 TNK 64
K
Sbjct: 711 NKK 713
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H +P F C + C + L H K H+ K
Sbjct: 629 CHIQGCGKVYGKTSHLRAHLRWHTGERP-FMCNWSYCGKRFTRSDELQRH-KRTHTGEK 685
>sp|O89090|SP1_MOUSE Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2
Length = 784
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C CGK F RS+ LQ H H K KF CP +C ++ L H+K H
Sbjct: 655 RPFMCNWSYCGKRFTRSDELQRHKRTHTGEK-KFACP--ECPKRFMRSDHLSKHIK-THQ 710
Query: 62 TNK 64
K
Sbjct: 711 NKK 713
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H +P F C + C + L H K H+ K
Sbjct: 629 CHIQGCGKVYGKTSHLRAHLRWHTGERP-FMCNWSYCGKRFTRSDELQRH-KRTHTGEK 685
>sp|P34695|TF3A_RANPI Transcription factor IIIA OS=Rana pipiens GN=gtf3a PE=2 SV=1
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH 60
R FPC + CGK F+ HL H + H KP C DC +S+ ++L H + H
Sbjct: 41 RPFPCTVEGCGKGFVTLFHLTRHSMTHTGEKP-CKCDAPDCDLSFTTMTNLRKHYQRAH 98
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
++ CP C +++ + LQ H+L +E+ F C + C ++ K SL H
Sbjct: 220 VYKCPRDGCDRTYTKKFGLQSHILSFHEDSRPFACGHPGCGKTFAMKQSLDRH 272
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + F HL++H H + + CP C +Y K L +H+ H ++
Sbjct: 197 CNRKFKNKTHLKDHKRTHEVERVVYKCPRDGCDRTYTKKFGLQSHILSFHEDSR 250
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
++ C CG++F + L+ H H +P F C ++ C S+ + S L H K VH+
Sbjct: 104 IYECYFADCGQTFKKHNQLKLHQYIHTNQQP-FKCNHEGCDKSFSSPSRLKRHEK-VHA 160
>sp|P08044|SNAI_DROME Protein snail OS=Drosophila melanogaster GN=sna PE=2 SV=2
Length = 390
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
PC CGK+F R LQ H+ H KP F CP DC S+ +S+L AH
Sbjct: 304 LPCKCPICGKAFSRPWLLQGHIRTHTGEKP-FQCP--DCPRSFADRSNLRAH 352
>sp|Q5T619|ZN648_HUMAN Zinc finger protein 648 OS=Homo sapiens GN=ZNF648 PE=2 SV=1
Length = 568
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R FPCP TCGK F +S +L EH H +P F C DC +++ S L H + +H+
Sbjct: 418 RPFPCP--TCGKCFTKSSNLSEHQTLHTGQRP-FKC--ADCGVAFAQPSRLVRHQR-IHT 471
Query: 62 TNK 64
+
Sbjct: 472 GER 474
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C K++ S ++H+ H KP + CP DC ++V S L H +++HS NK
Sbjct: 312 CDKAYTWSSDHRKHIRTHTGEKP-YPCP--DCGKAFVRSSDLRKHQRNMHSNNK 362
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQ-HNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+PCP CGK+F+RS L++H H+ NKP F C +C +++ SL H +
Sbjct: 335 YPCP--DCGKAFVRSSDLRKHQRNMHSNNKP-FPC--SECGLTFNKPLSLLRHQR 384
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R FPC CG++F RS L+ H H+ K F C +C ++ S L H++
Sbjct: 474 RPFPC--TQCGQAFARSSTLKRHQQIHSGEK-GFLC--AECGRAFRIASELAQHIR 524
>sp|Q5T0B9|ZN362_HUMAN Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 PE=1 SV=1
Length = 420
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL 56
R + CP C K+F + +LQ H QHN++KP + CP +C +Y +SL HL
Sbjct: 309 RPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKP-YKCP--NCYRAYSDSASLQIHL 360
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
C KSF + HLQ+H H ++P + CP+ C ++ S+L +H +
Sbjct: 288 CDKSFRQLSHLQQHTRIHTGDRP-YKCPHPGCEKAFTQLSNLQSHQR 333
>sp|Q9STM3|REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1
SV=1
Length = 1360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
CP+ CGK+F ++L +H H++++P CP++ C M++ S H++ VH+
Sbjct: 1268 CPIKGCGKNFFSHKYLVQHQRVHSDDRP-LKCPWKGCKMTFKWAWSRTEHIR-VHT 1321
>sp|Q9UTL5|TF3A_SCHPO Transcription factor IIIA OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sfc2 PE=2 SV=1
Length = 374
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
++F CP CGK + R L++H+ H+ +P F C Y C ++ KS L H +
Sbjct: 21 KIFHCPYEECGKKYSRPSLLEQHLRTHSNERP-FVCDYTGCSKAFYRKSHLKIHKR 75
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 11 CGKSFLRSEHLQEHMLQHN---ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
CG+ F + HL+ H++ H E + + CP + C S+ S+L H+ +H N
Sbjct: 209 CGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
R F C C K+F R HL+ H H KP F+C Y C + + L H++
Sbjct: 51 RPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP-FSCHYDGCDAQFYTQQHLERHIE 105
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH 60
++ F C C F +HL+ H+ H + KP + C ++ C + L +H+ H
Sbjct: 80 VKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKP-YACTWEGCDECFSKHQQLRSHISACH 138
Query: 61 S 61
+
Sbjct: 139 T 139
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH 60
+ C C + F + + L+ H+ + + + C YQDC + + K L H+ H
Sbjct: 113 YACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAH 169
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM--SYVAKSSLYAHLKHVH 60
+PC C F + LQ H+ + +E ++CP++ C+ + S L H++ H
Sbjct: 144 YPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH 202
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ + CP+ C KSF RS L++H+ +E F C C + K L HL+
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHC--DSCGTKFGYKHMLQRHLE 287
>sp|Q02446|SP4_HUMAN Transcription factor Sp4 OS=Homo sapiens GN=SP4 PE=1 SV=2
Length = 784
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGK F RS+ LQ H H K +F CP +C ++ L H+K H
Sbjct: 675 RPFICNWMFCGKRFTRSDELQRHRRTHTGEK-RFECP--ECSKRFMRSDHLSKHVK-THQ 730
Query: 62 TNK 64
K
Sbjct: 731 NKK 733
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H +P F C + C + L H + H+ K
Sbjct: 649 CHIEGCGKVYGKTSHLRAHLRWHTGERP-FICNWMFCGKRFTRSDELQRH-RRTHTGEK 705
>sp|Q6BEB4|SP5_HUMAN Transcription factor Sp5 OS=Homo sapiens GN=SP5 PE=2 SV=1
Length = 398
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGKSF RS+ LQ H+ H K +F CP +C ++ L H+K H
Sbjct: 324 RPFVCNWLFCGKSFTRSDELQRHLRTHTGEK-RFACP--ECGKRFMRSDHLAKHVK-THQ 379
Query: 62 TNKI 65
K+
Sbjct: 380 NKKL 383
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
C + CGK + ++ HL+ H+ H +P F C + C S+ L HL+
Sbjct: 298 CHVPGCGKVYGKTSHLKAHLRWHTGERP-FVCNWLFCGKSFTRSDELQRHLR 348
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPK 34
+ F CP CGK F+RS+HL +H+ H K K
Sbjct: 354 KRFACP--ECGKRFMRSDHLAKHVKTHQNKKLK 384
>sp|Q86VK4|ZN410_HUMAN Zinc finger protein 410 OS=Homo sapiens GN=ZNF410 PE=1 SV=2
Length = 478
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F CP CGKSF + L+ HM HN KP F C C + +L H + +H+
Sbjct: 247 RSFICPAEGCGKSFYVLQRLKVHMRTHNGEKP-FMCHESGCGKQFTTAGNLKNH-RRIHT 304
Query: 62 TNK 64
K
Sbjct: 305 GEK 307
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
F C CGK F + +L+ H H KP F C Q C S+ SSL HL VHS
Sbjct: 279 FMCHESGCGKQFTTAGNLKNHRRIHTGEKP-FLCEAQGCGRSFAEYSSLRKHLV-VHSGE 336
Query: 64 K 64
K
Sbjct: 337 K 337
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ C + C ++F+ H + H+ H N F CP + C S+ L H++
Sbjct: 217 KKLKCTVEGCDRTFVWPAHFKYHLKTH-RNDRSFICPAEGCGKSFYVLQRLKVHMR 271
>sp|Q62445|SP4_MOUSE Transcription factor Sp4 OS=Mus musculus GN=Sp4 PE=2 SV=2
Length = 782
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F C + CGK F RS+ LQ H H K +F CP +C ++ L H+K H
Sbjct: 673 RPFICNWMFCGKRFTRSDELQRHRRTHTGEK-RFECP--ECSKRFMRSDHLSKHVK-THQ 728
Query: 62 TNK 64
K
Sbjct: 729 NKK 731
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 6 CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 64
C + CGK + ++ HL+ H+ H +P F C + C + L H + H+ K
Sbjct: 647 CHIEGCGKVYGKTSHLRAHLRWHTGERP-FICNWMFCGKRFTRSDELQRH-RRTHTGEK 703
>sp|Q9H5J0|ZBTB3_HUMAN Zinc finger and BTB domain-containing protein 3 OS=Homo sapiens
GN=ZBTB3 PE=1 SV=1
Length = 574
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 10 TCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
TCGK+F S L+ H H +P + C Y CL SY LY H++ H+ +
Sbjct: 476 TCGKTFSCSYTLRRHATVHTRERP-YECRY--CLRSYTQSGDLYRHIRKAHNED 526
>sp|O43623|SNAI2_HUMAN Zinc finger protein SNAI2 OS=Homo sapiens GN=SNAI2 PE=1 SV=1
Length = 268
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
PC CGK+F R LQ H+ H KP F+CP+ C ++ +S+L AHL+
Sbjct: 183 LPCVCKICGKAFSRPWLLQGHIRTHTGEKP-FSCPH--CNRAFADRSNLRAHLQ 233
>sp|Q8BKX7|ZN410_MOUSE Zinc finger protein 410 OS=Mus musculus GN=Znf410 PE=2 SV=2
Length = 478
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
R F CP CGKSF + L+ HM HN KP F C C + +L H + +H+
Sbjct: 247 RSFICPAEGCGKSFYVLQRLKVHMRTHNGEKP-FMCHESGCGKQFTTAGNLKNH-RRIHT 304
Query: 62 TNK 64
K
Sbjct: 305 GEK 307
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
F C CGK F + +L+ H H KP F C Q C S+ SSL HL VHS
Sbjct: 279 FMCHESGCGKQFTTAGNLKNHRRIHTGEKP-FLCEAQGCGRSFAEYSSLRKHLV-VHSGE 336
Query: 64 K 64
K
Sbjct: 337 K 337
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
+ C + C ++F+ H + H+ H N+ F CP + C S+ L H++
Sbjct: 217 KKLKCTVEGCDRTFVWPAHFKYHLKTH-RNERSFICPAEGCGKSFYVLQRLKVHMR 271
>sp|O08954|SNAI2_RAT Zinc finger protein SNAI2 OS=Rattus norvegicus GN=Snai2 PE=2 SV=2
Length = 268
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
PC CGK+F R LQ H+ H KP F+CP+ C ++ +S+L AHL+
Sbjct: 183 LPCVCKICGKAFSRPWLLQGHIRTHTGEKP-FSCPH--CNRAFADRSNLRAHLQ 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.132 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,195,742
Number of Sequences: 539616
Number of extensions: 725885
Number of successful extensions: 11545
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 734
Number of HSP's that attempted gapping in prelim test: 3400
Number of HSP's gapped (non-prelim): 8586
length of query: 66
length of database: 191,569,459
effective HSP length: 38
effective length of query: 28
effective length of database: 171,064,051
effective search space: 4789793428
effective search space used: 4789793428
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)