BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17782
(256 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V24|A Chain A, Structure Of The Human Spry Domain-Containing Socs Box
Protein Ssb-4
Length = 208
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 39 TWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98
W+ D+S + + + T + HP ++ GIRG G + W++ R GT
Sbjct: 30 AWNPEDRSLNVFVKDDDRLTFHRHPV-AQSTDGIRGKVGHARGLHAWQINWPARQRGTHA 88
Query: 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLS-HKGLIFHGGK---FYNYTKPFPENEA--- 151
+ G+ T +A +H + L+G D SWG + ++H GK Y +EA
Sbjct: 89 VVGVATARAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFAL 148
Query: 152 -TRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICSTAVKTQISLE 204
+ V+ D GTLSF DG+YLG+AF+GL+ + LYP++ + ++++
Sbjct: 149 PDSLLVVLDMDEGTLSFIVDGQYLGVAFRGLK--GKKLYPVVSAVWGHCEVTMR 200
>pdb|2FNJ|A Chain A, Crystal Structure Of A B30.2SPRY DOMAIN-Containing Protein
Gustavus In Complex With Elongin B And Elongin C
Length = 226
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 39 TWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98
+W+ D+S + + + T + HP ++ IRG L G + WE+ R GT
Sbjct: 32 SWNSEDRSLNIFVKEDDKLTFHRHPV-AQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHA 90
Query: 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLS-HKGLIFHGGKF---YNYTKPFPENEA--- 151
+ G+ T A +H + +L+G E SWG + ++H K Y +EA
Sbjct: 91 VVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLV 150
Query: 152 -TRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICSTAVKTQISLEVA---R 207
+ V D GTLSF D +YLGIAF+GL+ + LYP++ + +I++
Sbjct: 151 PDKFLVALDMDEGTLSFIVDQQYLGIAFRGLR--GKKLYPIVSAVWGHCEITMRYIGGLD 208
Query: 208 RDFINLQDRCRSII 221
+ + L D CR I
Sbjct: 209 PEPLPLMDLCRRTI 222
>pdb|2JK9|A Chain A, The Structure Of Spla-Ryanodine Receptor Domain And Socs
Box Containing 1 In Complex With A Par-4 Peptide
Length = 212
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 39 TWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98
+W+ ND+S + + + + HP ++ IRG G + W++ + R GT
Sbjct: 34 SWNNNDRSLNVFVKEDDKLIFHRHPV-AQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHA 92
Query: 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLS-HKGLIFHGGKFYNYTKPFP---ENEATRI 154
+ G+ T A +H + L+G + SWG + ++H GK +K +P E + T I
Sbjct: 93 VVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGK-NQPSKTYPAFLEPDETFI 151
Query: 155 G-----VLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICSTAVKTQISLE 204
V D GTLSF DG+Y+G+AF+GL+ + LYP++ + +I +
Sbjct: 152 VPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLK--GKKLYPVVSAVWGHCEIRMR 204
>pdb|3F2O|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN
AND SOCS BOX Containing 1 (Spsb1) In Complex With A
20-Residue Vasa Peptide
pdb|3F2O|B Chain B, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN
AND SOCS BOX Containing 1 (Spsb1) In Complex With A
20-Residue Vasa Peptide
Length = 233
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 39 TWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98
+W+ ND+S + + + + HP ++ IRG G + W++ + R GT
Sbjct: 55 SWNNNDRSLNVFVKEDDKLIFHRHPV-AQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHA 113
Query: 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLS-HKGLIFHGGKFYNYTKPFP---ENEATRI 154
+ G+ T A +H + L+G + SWG + ++H GK +K +P E + T I
Sbjct: 114 VVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGK-NQPSKTYPAFLEPDETFI 172
Query: 155 G-----VLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICSTAVKTQISL 203
V D GTLSF DG+Y+G+AF+GL+ + LYP++ + +I +
Sbjct: 173 VPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLK--GKKLYPVVSAVWGHCEIRM 224
>pdb|2IHS|A Chain A, Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAVUS IN
Complex With A 20-Residue Vasa Peptide
pdb|2IHS|B Chain B, Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAVUS IN
Complex With A 20-Residue Vasa Peptide
Length = 214
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 39 TWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98
+W+ D+S + + + T + HP ++ IRG L G + WE+ R GT
Sbjct: 34 SWNSEDRSLNIFVKEDDKLTFHRHPV-AQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHA 92
Query: 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLS-HKGLIFHGGKF---YNYTKPFPENEA--- 151
+ G+ T A +H + +L+G E SWG + ++H K Y +EA
Sbjct: 93 VVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLV 152
Query: 152 -TRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICSTAVKTQISL 203
+ V D GTLSF D +YLGIAF+GL+ + LYP++ + +I++
Sbjct: 153 PDKFLVALDMDEGTLSFIVDQQYLGIAFRGLR--GKKLYPIVSAVWGHCEITM 203
>pdb|3EK9|A Chain A, Spry Domain-Containing Socs Box Protein 2: Crystal
Structure And Residues Critical For Protein Binding
Length = 213
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 71 GIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGLS-H 129
G+RG R + G + WE++ GT + G+ T A + + + L+G + SWG
Sbjct: 66 GVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIG 125
Query: 130 KGLIFHGGKFYNYTK--PFPENE----ATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQH 183
+G ++H K + P+ E R+ V+ D GTL + G YLG AF+GL+
Sbjct: 126 RGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLKG 185
Query: 184 VQEPLYPMICSTAVKTQISL 203
LYP + + + Q+ +
Sbjct: 186 --RTLYPSVSAVWGQCQVRI 203
>pdb|2AFJ|A Chain A, Spry Domain-Containing Socs Box Protein 2 (Ssb-2)
Length = 226
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 71 GIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGLS-H 129
G+RG R + G + WE++ GT + G+ T A + + + L+G + SWG
Sbjct: 72 GVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIG 131
Query: 130 KGLIFHGGKFYNYTK--PFPENE----ATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQH 183
+G ++H K + P+ E R+ V+ D GTL + G YLG AF+GL+
Sbjct: 132 RGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLK- 190
Query: 184 VQEPLYPMICSTAVKTQISL 203
LYP + + + Q+ +
Sbjct: 191 -GRTLYPSVSAVWGQCQVRI 209
>pdb|3EMW|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN
AND SOCS BOX Containing 2 (Spsb2) In Complex With A
20-Residue Vasa Peptide
Length = 217
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 71 GIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGLS-H 129
G RG R + G + WE++ GT + G+ T A + + + L+G + SWG
Sbjct: 75 GARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAALLGSNSESWGWDIG 134
Query: 130 KGLIFHGGKFYNYTKPFPENE-------ATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQ 182
+G ++H K + +P R+ V+ D GTL + G YLG AF+GL+
Sbjct: 135 RGKLYHQSKGPGAPQ-YPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLK 193
Query: 183 HVQEPLYPMICSTAVKTQISL 203
LYP + + + Q+ +
Sbjct: 194 G--RTLYPAVSAVWGQCQVRI 212
>pdb|3KB5|A Chain A, Pry-Spry Domain Of Human Trim72
Length = 193
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 69 AAGIRGTRQLNNGRYYWELATSQR-LFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGL 127
A + +QL+ G +YWE+ + + ++ R+ R+H L W L
Sbjct: 54 AVAVVAHQQLSEGEHYWEVDVGDKPRWALGVIAAEAPRRGRLHAVPSQGL-------WLL 106
Query: 128 S-HKGLIFHGGKFYNYTKPF--PENEATRIGVLFDGIAGTLSFY--KDGEYLGIAFQGLQ 182
+G I + PE TRIG+ G LSFY D + L F +
Sbjct: 107 GLREGKILEAHVEAKEPRALRSPERRPTRIGLYLSFGDGVLSFYDASDADALVPLFAFHE 166
Query: 183 HVQEPLYPM--IC 193
+ P+YP +C
Sbjct: 167 RLPRPVYPFFDVC 179
>pdb|2FBE|A Chain A, Crystal Structure Of The Pryspry-Domain
pdb|2FBE|B Chain B, Crystal Structure Of The Pryspry-Domain
pdb|2FBE|C Chain C, Crystal Structure Of The Pryspry-Domain
pdb|2FBE|D Chain D, Crystal Structure Of The Pryspry-Domain
Length = 201
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 69 AAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGL- 127
A + GT + +GR+YWE+ GTS ++ +G K +++ I L EH +
Sbjct: 51 ALCVLGTPRFTSGRHYWEVDV-----GTSQVWDVGVCKESVNRQGKIEL--SSEHGFLTV 103
Query: 128 -SHKGLIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSFY--KDGEYL 174
+G +F T + + R+G+ D +++FY DG ++
Sbjct: 104 GCREGKVF-AASTVPXTPLWVSPQLHRVGIFLDVGXRSIAFYNVSDGCHI 152
>pdb|3UV9|A Chain A, Structure Of The Rhesus Monkey Trim5alpha Deltav1 Pryspry
Domain
Length = 186
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 66 SKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHS- 124
S+ G+ G++ + +G++YWE+ S++ ++ + G+ A +A N+ + +
Sbjct: 35 SRAGTGVLGSQSITSGKHYWEVDVSKK---SAWILGVC---AGFQSDAMYNIEQNENYQP 88
Query: 125 ----W--GLSH--KGLIFHGGKFYNYTKPFPENEAT-----RIGVLFDGIAGTLSFYKDG 171
W GL K +F G + PF + R+GV D A T+SF+
Sbjct: 89 KYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNIT 148
Query: 172 EYLGIAFQGLQ-HVQEPLYPMI 192
+ + ++ Q +P++P +
Sbjct: 149 NHGFLIYKFSQCSFSKPVFPYL 170
>pdb|2LM3|A Chain A, Structure Of The Rhesus Monkey Trim5alpha Pryspry Domain
Length = 208
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 69 AAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHS--WG 126
G+ G++ + +G++YWE+ S++ ++ + G+ A +A N+ + + +G
Sbjct: 60 CTGVLGSQSITSGKHYWEVDVSKK---SAWILGVC---AGFQSDAMYNIEQNENYQPKYG 113
Query: 127 LSHKGL-------IFHGGKFYNYTKPFPENEAT-----RIGVLFDGIAGTLSFYKDGEYL 174
GL +F G + PF + R+GV D A T+SF+ +
Sbjct: 114 YWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHG 173
Query: 175 GIAFQGLQ-HVQEPLYPMI 192
+ ++ Q +P++P +
Sbjct: 174 FLIYKFSQCSFSKPVFPYL 192
>pdb|4B3N|A Chain A, Crystal Structure Of Rhesus Trim5alpha PrySPRY DOMAIN
pdb|4B3N|B Chain B, Crystal Structure Of Rhesus Trim5alpha PrySPRY DOMAIN
Length = 602
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 71 GIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHS-----W 125
G+ G++ + +G++YWE+ S++ ++ + G+ A +A N+ + + W
Sbjct: 460 GVLGSQSITSGKHYWEVDVSKK---SAWILGVC---AGFQSDAMYNIEQNENYQPKYGYW 513
Query: 126 --GLSH--KGLIFHGGKFYNYTKPFPENEAT-----RIGVLFDGIAGTLSFYKDGEYLGI 176
GL K +F G + PF + R+GV D A T+SF+ + +
Sbjct: 514 VIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFL 573
Query: 177 AFQGLQ-HVQEPLYPMI 192
++ Q +P++P +
Sbjct: 574 IYKFSQCSFSKPVFPYL 590
>pdb|1J3B|A Chain A, Crystal Structure Of Atp-dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1J3B|B Chain B, Crystal Structure Of Atp-dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1XKV|A Chain A, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1XKV|B Chain B, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|A Chain A, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|B Chain B, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|C Chain C, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|D Chain D, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
Length = 529
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 96 TSMMFGI-GTRKARIHQNAFINLIGKDEHSWGLSHKGLI-FHGGKFYNYTKPFPENE 150
++ FG+ GT K + + LIG DEH W S G+ F GG + + PE+E
Sbjct: 227 VAVFFGLSGTGKTTLSTDPERPLIGDDEHGW--SEDGVFNFEGGCYAKVIRLSPEHE 281
>pdb|1II2|A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
(Pepck) From Trypanosoma Cruzi
pdb|1II2|B Chain B, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
(Pepck) From Trypanosoma Cruzi
Length = 524
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 96 TSMMFGI-GTRKARIHQNAFINLIGKDEHSWGLSHKGLI-FHGGKFYNYTKPFPENE--- 150
++ FG+ GT K + + NLIG DEH W + +G+ GG + P+ E
Sbjct: 215 VTVFFGLSGTGKTTLSADPHRNLIGDDEHVW--TDRGVFNIEGGCYAKAIGLNPKTEKDI 272
Query: 151 --ATRIGV-----LFDGIAGTLSFYKD 170
A R G + D G + FY +
Sbjct: 273 YDAVRFGAVAENCVLDKRTGEIDFYDE 299
>pdb|1IV8|A Chain A, Crystal Structure Of Maltooligosyl Trehalose Synthase
Length = 720
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 91 QRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGLSHKGLIFHGGKFYNYTKPFPENE 150
+RL T+ G+G I Q+ N + + +W L + +Y Y FPE++
Sbjct: 69 RRLIETAHTIGLG-----IIQDIVPNHMAVNSLNWRLMDVLXMGXXSXYYTYFDFFPEDD 123
Query: 151 ATRIGVLFDGI-----AGTLSFYKDGE 172
R+ +L + + G L KDG+
Sbjct: 124 KIRLPILGEDLDTVISKGLLKIVKDGD 150
>pdb|1YGG|A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
From Actinobacillus Succinogenes
pdb|1YLH|A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
From Actinobaccilus Succinogenes In Complex With
Manganese And Pyruvate
Length = 560
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 97 SMMFGI-GTRKARIHQNAFINLIGKDEHSWGLSHKGLI-FHGGKFYNYTKPFPENEATRI 154
++ FG+ GT K + + LIG DEH W G+ F GG + ENE
Sbjct: 264 AIFFGLSGTGKTTLSTDPKRQLIGDDEHGW--DESGVFNFEGGCYAKTINLSQENEPDIY 321
Query: 155 GVL 157
G +
Sbjct: 322 GAI 324
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,065,104
Number of Sequences: 62578
Number of extensions: 345034
Number of successful extensions: 674
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 656
Number of HSP's gapped (non-prelim): 21
length of query: 256
length of database: 14,973,337
effective HSP length: 97
effective length of query: 159
effective length of database: 8,903,271
effective search space: 1415620089
effective search space used: 1415620089
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)