Query psy17782
Match_columns 256
No_of_seqs 261 out of 1295
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 22:52:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fbe_A Predicted: similar to R 100.0 4.2E-37 1.4E-41 254.4 20.9 163 29-205 5-185 (201)
2 2wl1_A Pyrin, marenostrin; amy 100.0 2.6E-37 8.9E-42 254.0 18.8 164 28-205 7-189 (191)
3 2vok_A 52 kDa RO protein; poly 100.0 2.4E-37 8.3E-42 253.2 17.8 157 37-205 10-185 (188)
4 3emw_A SPRY domain-containing 100.0 2.3E-37 7.8E-42 259.4 16.9 166 37-206 43-215 (217)
5 3uv9_A TRIM5alpha, tripartite 100.0 7.3E-37 2.5E-41 250.4 16.8 167 27-206 5-184 (186)
6 3kb5_A Tripartite motif-contai 100.0 8.9E-36 3E-40 245.4 18.4 147 38-195 14-179 (193)
7 2jk9_A SPRY domain-containing 100.0 4.2E-36 1.4E-40 251.3 16.5 166 37-206 32-206 (212)
8 2afj_A Gene rich cluster, C9 g 100.0 2.7E-36 9.1E-41 254.7 8.8 166 37-206 40-212 (226)
9 4b3n_A Maltose-binding peripla 100.0 4.7E-33 1.6E-37 265.4 16.6 166 28-204 404-602 (602)
10 3toj_A SET1/ASH2 histone methy 100.0 1.7E-31 5.8E-36 223.2 19.5 154 37-205 12-174 (213)
11 2yyo_A SPRY domain-containing 99.9 6E-26 2E-30 183.3 16.1 151 42-205 4-161 (171)
12 2e63_A KIAA1787 protein; struc 98.9 1.1E-07 3.7E-12 75.9 17.3 155 38-203 7-169 (170)
13 2jz3_A Suppressor of cytokine 98.5 8.2E-08 2.8E-12 57.7 4.1 35 210-245 1-35 (40)
14 2yue_A Protein neuralized; str 98.5 5.6E-06 1.9E-10 65.7 15.2 149 37-206 8-162 (168)
15 2izv_A Suppressor of cytokine 97.7 7.9E-06 2.7E-10 66.1 1.6 37 209-245 135-171 (187)
16 2c9w_A Suppressor of cytokine 97.3 0.00016 5.6E-09 57.3 3.8 45 199-245 119-164 (169)
17 2xai_A ASB-9, ankyrin repeat a 88.3 0.32 1.1E-05 39.9 3.4 37 209-245 221-260 (261)
18 4ajy_V VON hippel-lindau disea 87.0 0.9 3.1E-05 35.2 4.9 36 210-245 105-140 (163)
19 1lm8_V VHL, VON hippel-lindau 82.6 1.7 5.7E-05 33.7 4.7 36 210-245 102-137 (160)
20 4hg1_A Putative cytoplasmic pr 57.5 3.1 0.0001 32.5 0.8 40 207-246 23-62 (225)
21 1zps_A PRA-CH, phosphoribosyl- 21.6 1.5E+02 0.0051 22.0 4.8 68 89-170 28-96 (138)
No 1
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=100.00 E-value=4.2e-37 Score=254.37 Aligned_cols=163 Identities=15% Similarity=0.209 Sum_probs=133.5
Q ss_pred ccccCCCCceeEeCCCCCCCEEEecCCCceEEe---------CCCCCCCcceEEecccccCceEEEEEEEeccccCceEE
Q psy17782 29 MFKYGCDDWWTWDRNDKSPDTKLFGKNHRTVNF---------HPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMM 99 (256)
Q Consensus 29 ~~~~~~~~~~~ld~~~~~~~l~ls~d~~~~v~~---------~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~ 99 (256)
+++|.++ ++|||+||+++|.||+| +++|++ +|+||+.+.+|||+++|++|||||||+|+++ +.|.
T Consensus 5 ~~~~~~~--~tLDp~TA~~~L~lSed-~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~~---~~w~ 78 (201)
T 2fbe_A 5 SPEFQVD--MTFDVDTANNYLIISED-LRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTS---QVWD 78 (201)
T ss_dssp CGGGBCC--CCEETTTCCTTEEECTT-SSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTTC---SEEE
T ss_pred ceeEEEe--EEECcccCCCceEECCC-CcEEEECCccCCCCCCccceeeccceecCccccCCceEEEEEeCCC---CEEE
Confidence 4567776 99999999999999999 999987 5789998999999999999999999999875 4799
Q ss_pred EEEEeccccccccccccccCCCCceeEEEeC-c---EEEeCCeeeecCCCCCCCCCCEEEEEEeCCCCEEEEEEcCe-ee
Q psy17782 100 FGIGTRKARIHQNAFINLIGKDEHSWGLSHK-G---LIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSFYKDGE-YL 174 (256)
Q Consensus 100 vGv~~~~~~~~~~~~~~~lG~~~~sw~~~~~-g---~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~G~lsFy~~g~-~l 174 (256)
||||+++++|++. ..++.+.++|++.+. + .++| +..+.+.. ...+.||||+|||++|+||||++.+ .+
T Consensus 79 vGV~~~si~Rkg~---~~~~~~~g~W~l~~~~~~~y~~~~-~~~~~l~~---~~~~~rVGVfLDye~G~lSFY~v~~~~~ 151 (201)
T 2fbe_A 79 VGVCKESVNRQGK---IELSSEHGFLTVGCREGKVFAAST-VPMTPLWV---SPQLHRVGIFLDVGMRSIAFYNVSDGCH 151 (201)
T ss_dssp EEEEETTSCCSSC---CCCCTTTTEEEEEEETTTEEEECS-SSCEEECC---CTTCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEeeCccCCCCc---ccccCCCCEEEEEEeCCCEEEEEc-CCcccCcc---CCCCCEEEEEEEcCCCEEEEEeCCCCce
Confidence 9999999999864 357899999999974 3 2444 33334432 3367999999999999999999875 67
Q ss_pred eeeeeccccCCCceEEEEeecC----CceeEEEee
Q psy17782 175 GIAFQGLQHVQEPLYPMICSTA----VKTQISLEV 205 (256)
Q Consensus 175 g~af~~~~~f~~~lyP~~~~~~----~~~~v~l~~ 205 (256)
+++|+. ..|++||||+|++.. ....++|+.
T Consensus 152 i~tF~~-~~Fs~pL~P~F~~~~~~~~~~~~l~ic~ 185 (201)
T 2fbe_A 152 IYTFIE-IPVCEPWRPFFAHKRGSQDDQSILSICS 185 (201)
T ss_dssp EEEECS-CCCSSCEEEEEEEECSSSSCCCCEEECC
T ss_pred eEEEcC-CCCCCCEEeEEEecccCCCCCCCEEEeC
Confidence 777763 369999999999862 234688885
No 2
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=254.03 Aligned_cols=164 Identities=15% Similarity=0.247 Sum_probs=134.0
Q ss_pred cccccCCCCceeEeCCCCCCCEEEecCCCceEEe---------CCCCCCCcceEEecccccCceEEEEEEEeccccCceE
Q psy17782 28 DMFKYGCDDWWTWDRNDKSPDTKLFGKNHRTVNF---------HPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSM 98 (256)
Q Consensus 28 ~~~~~~~~~~~~ld~~~~~~~l~ls~d~~~~v~~---------~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~ 98 (256)
.+++|.++ ++|||+||+++|.||+| +++|++ +|+||+.+.+|||.++|++|||||||+|+++ +.|
T Consensus 7 ~~~~~~~~--~tLDp~TA~~~L~lSed-~~~v~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrHYWEVev~~~---~~w 80 (191)
T 2wl1_A 7 GAQAHAVN--VILDAETAYPNLIFSDD-LKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGDK---TAW 80 (191)
T ss_dssp HHHTTBCC--CEECTTTSCTTEEECTT-SCEEEECCTTCCCCCCTTSCSSSCCEEEECCBCSSEEEEEEECTTC---SCE
T ss_pred hhhheeee--eEECCccCCCceEECCC-CcEEEECCcCCCCCCCcccccccccccCcccccCCCEEEEEEeCCC---CEE
Confidence 45678776 99999999999999999 999986 5789999999999999999999999999875 479
Q ss_pred EEEEEeccccccccccccccCCCCceeEEEeC-c---EEEeCCeeeecCCCCCCCCCCEEEEEEeCCCCEEEEEEcCe-e
Q psy17782 99 MFGIGTRKARIHQNAFINLIGKDEHSWGLSHK-G---LIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSFYKDGE-Y 173 (256)
Q Consensus 99 ~vGv~~~~~~~~~~~~~~~lG~~~~sw~~~~~-g---~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~G~lsFy~~g~-~ 173 (256)
.||||+++++|++. ..+|.+.++|++.+. + .++|+... .+.. ...+.||||+|||++|+||||++.+ .
T Consensus 81 ~vGV~~~s~~Rkg~---~~~~~~~~~W~l~~~~~~~y~~~~~~~~-~l~~---~~~~~rVGVfLDye~G~lSFY~v~~~~ 153 (191)
T 2wl1_A 81 ILGACKTSISRKGN---MTLSPENGYWVVIMMKENEYQASSVPPT-RLLI---KEPPKRVGIFVDYRVGSISFYNVTARS 153 (191)
T ss_dssp EEEEEETTCCSSSC---CCCCGGGTEEEEEEEETTEEEECCSSCE-ECCC---SSCCSEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEeeCCcCCCCc---cccCCCCCEEEEEEeCCCEEEEEcCCCc-cCcc---ccCCcEEEEEEEcCCCEEEEEECCCCc
Confidence 99999999999864 358899999999863 3 35666432 2321 2358999999999999999999864 6
Q ss_pred eeeeeeccccCCCceEEEEeecCC-----ceeEEEee
Q psy17782 174 LGIAFQGLQHVQEPLYPMICSTAV-----KTQISLEV 205 (256)
Q Consensus 174 lg~af~~~~~f~~~lyP~~~~~~~-----~~~v~l~~ 205 (256)
++++|+. ..|++||||+|++... ...++|+.
T Consensus 154 ~i~tF~~-~~Fs~pl~P~F~~~~~~~~~~~~~l~i~~ 189 (191)
T 2wl1_A 154 HIYTFAS-CSFSGPLQPIFSPGTRDGGKNTAPLTICP 189 (191)
T ss_dssp EEEEECC-CCCCSCEEEEEECCCCGGGTSCSCEEEEC
T ss_pred ceEEeCC-CCCCCCEEeEEEccccCCCCCcCCEEecC
Confidence 7777763 3799999999998642 23577764
No 3
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=100.00 E-value=2.4e-37 Score=253.24 Aligned_cols=157 Identities=18% Similarity=0.243 Sum_probs=130.3
Q ss_pred ceeEeCCCCCCCEEEecCCCceEEe---------CCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEeccc
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHRTVNF---------HPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKA 107 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~~v~~---------~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~ 107 (256)
+++|||+||+++|.||+| +++|++ +|+||+.+.+|||.++|++|||||||+|+++ +.|.||||++++
T Consensus 10 ~vtLDp~TA~~~L~lSed-~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~~---~~w~vGV~~~si 85 (188)
T 2vok_A 10 HITLDRNTANSWLIISKD-RRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVTQK---EAWDLGVCRDSV 85 (188)
T ss_dssp CCCBCGGGSCTTEEECTT-SCEEEECSSCCCCCCCTTSCCSSSEEEBSCCBSSSEEEEEEECTTC---SCEEEEEEETTC
T ss_pred ceEECCccCCCCeEECCC-CCEEEECCccCCCCCCccceeeeccccccCcccCCCeEEEEEecCC---ceEEEEEeeCCc
Confidence 489999999999999999 999987 5789999999999999999999999999875 479999999999
Q ss_pred cccccccccccCCCCceeEEEeC-c--EEEeCCeeeecCCCCCCCCCCEEEEEEeCCCCEEEEEEcCe--eeeeeeeccc
Q psy17782 108 RIHQNAFINLIGKDEHSWGLSHK-G--LIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSFYKDGE--YLGIAFQGLQ 182 (256)
Q Consensus 108 ~~~~~~~~~~lG~~~~sw~~~~~-g--~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~G~lsFy~~g~--~lg~af~~~~ 182 (256)
+|++. ..+|.++++|++.+. + .++|+... .+.. ...+.||||+||||+|+||||++.+ .++++|+. .
T Consensus 86 ~Rkg~---~~~~~~~~~W~l~~~~~~y~~~~~~~~-~l~~---~~~~~rVGVfLDye~G~lSFY~v~~~~~~I~tF~~-~ 157 (188)
T 2vok_A 86 QRKGQ---FSLSPENGFWTIWLWQDSYEAGTSPQT-TLHI---QVPPCQIGIFVDYEAGVVSFYNITDHGSLIYTFSE-C 157 (188)
T ss_dssp CCSSC---CCCSTTTTEEEEEEETTEEEECSSSCE-EECC---SSCCSEEEEEEETTTTEEEEEETTTTTEEEEEECS-C
T ss_pred CCCCc---cccCCCCCEEEEEEECCEEEEEeCCcc-CEec---CCCCCEEEEEEEcCCCEEEEEECCCCCeeeEEecC-C
Confidence 99864 368999999999974 3 46676542 3322 2357999999999999999999864 57777763 3
Q ss_pred cCCCceEEEEeecCC-----ceeEEEee
Q psy17782 183 HVQEPLYPMICSTAV-----KTQISLEV 205 (256)
Q Consensus 183 ~f~~~lyP~~~~~~~-----~~~v~l~~ 205 (256)
.|++||||+|++... ...++|+.
T Consensus 158 ~Fs~pL~P~F~~~~~~~~~~~~~l~i~~ 185 (188)
T 2vok_A 158 VFAGPLRPFFNVGFNYSGGNAAPLKLCP 185 (188)
T ss_dssp CCCSCEEEEEECCCCTTSCCCCCEEECC
T ss_pred CCCCCEEeEEEecccCCCCCCCCEEEeC
Confidence 799999999998643 34677764
No 4
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=100.00 E-value=2.3e-37 Score=259.41 Aligned_cols=166 Identities=25% Similarity=0.431 Sum_probs=140.2
Q ss_pred ceeEeCCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEecccccccccccc
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFIN 116 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~~~~~~~~~~ 116 (256)
+++|||++|+++|.||+| +++|++.|.. ..+.+|||+++|++|+|||||+|.+...++.|.||||++++++++.+..+
T Consensus 43 ~~tlDp~ta~~~L~lSed-~~~v~~~~~~-~~~~~Vl~~~~~~sGrhYWEV~v~~~~~g~~~~vGv~~~~~~r~~~g~~~ 120 (217)
T 3emw_A 43 RHGWNPKDCSENIEVKEG-GLYFERRPVA-QSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAA 120 (217)
T ss_dssp HTSEEEEEECTTEEEEGG-GTEEEECCBS-SCEEEEEESCCBSSSEEEEEEECCGGGCTTCCEEEEECTTSCCEESSSCC
T ss_pred ceEeCcccCCCCEEECCC-CeEEEECccC-CCCCEEEeCCCccCccEEEEEEEcccCCCCceeEEEEcCccccccCCccc
Confidence 489999999999999999 9999987653 34679999999999999999999986545689999999999876544456
Q ss_pred ccCCCCceeEEEe-CcEEEeCCeee---ecCCC---CCCCCCCEEEEEEeCCCCEEEEEEcCeeeeeeeeccccCCCceE
Q psy17782 117 LIGKDEHSWGLSH-KGLIFHGGKFY---NYTKP---FPENEATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLY 189 (256)
Q Consensus 117 ~lG~~~~sw~~~~-~g~~~h~~~~~---~~~~~---~~~~~~~~IGv~LD~~~G~lsFy~~g~~lg~af~~~~~f~~~ly 189 (256)
.+|.+..||++.+ +|.+||++..+ .++.. .....+++|||+||+++|+|+||+|++.+++||+. .|+++||
T Consensus 121 ~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~--~~~~~Ly 198 (217)
T 3emw_A 121 LLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRG--LKGRTLY 198 (217)
T ss_dssp CTTSSTTEEEEETTTCBEESSCCSSCCCBSSSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECC--CTTCCBE
T ss_pred cccCCCCEEEEEeCCCcEEeCCcccCCccccccccccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEEC--CCCCEEE
Confidence 8999999999995 67889987642 35421 01236899999999999999999999999999995 4678999
Q ss_pred EEEeecCCceeEEEeee
Q psy17782 190 PMICSTAVKTQISLEVA 206 (256)
Q Consensus 190 P~~~~~~~~~~v~l~~~ 206 (256)
|+|++.+++++|+|.+.
T Consensus 199 P~~sl~~g~~~v~l~~~ 215 (217)
T 3emw_A 199 PAVSAVWGQCQVRIRYL 215 (217)
T ss_dssp EEEEECSTTCEEEEEEE
T ss_pred EEEEeccCCcEEEEEeC
Confidence 99999999999999875
No 5
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=100.00 E-value=7.3e-37 Score=250.35 Aligned_cols=167 Identities=20% Similarity=0.334 Sum_probs=132.5
Q ss_pred ccccccCCCCceeEeCCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEecc
Q psy17782 27 ADMFKYGCDDWWTWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRK 106 (256)
Q Consensus 27 ~~~~~~~~~~~~~ld~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~ 106 (256)
.++++|+++ ++|||+||++ |.||+| +++|++ ....+|||.++|++|||||||+|+++ +.|.||||++.
T Consensus 5 ~~~~~y~v~--vTLDp~TA~~-l~lSed-~r~Vr~-----~~~~~VLG~~~ftsGrHYWEVeV~~~---~~W~vGV~~~~ 72 (186)
T 3uv9_A 5 TDARRYWVD--VTLATNNISH-AVIAED-KRQVSS-----RAGTGVLGSQSITSGKHYWEVDVSKK---SAWILGVCAGF 72 (186)
T ss_dssp HHHGGGCCC--CCCCCCSSCC-CEECTT-SSCEEC-----CCSSCEECSSCBCSSEEEEEEECTTC---SCEEEEEESCS
T ss_pred hhhheeEEE--eEeCCCCcCC-ceECCC-CCEEee-----cCCCcCcCCCCCCCCCEEEEEEEcCC---CcEEEEEEEEE
Confidence 367899997 9999999995 999999 999965 44568999999999999999999875 47999999988
Q ss_pred ccccccc--cccccCCCCceeEEEe-Cc---EEEeCCeeee-cCC----CCCCCCCCEEEEEEeCCCCEEEEEEcCe--e
Q psy17782 107 ARIHQNA--FINLIGKDEHSWGLSH-KG---LIFHGGKFYN-YTK----PFPENEATRIGVLFDGIAGTLSFYKDGE--Y 173 (256)
Q Consensus 107 ~~~~~~~--~~~~lG~~~~sw~~~~-~g---~~~h~~~~~~-~~~----~~~~~~~~~IGv~LD~~~G~lsFy~~g~--~ 173 (256)
..+++.. ....+|++.++|++++ +| .++|++.... ... ......++||||+||||+|+||||++.+ .
T Consensus 73 ~~r~~~~~~~~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~p~rVGVfLDye~G~lSFYnv~d~~~ 152 (186)
T 3uv9_A 73 QSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGF 152 (186)
T ss_dssp TTTTTTTHHHHTCCCGGGTEEEEEEETTTEEEEEECCCTTSTTSCEEEECCCSSCCSEEEEEEETTTTEEEEEETTTTTE
T ss_pred ecccccccCCCcccCCCCCEEEEEECCCCEEEEEeCCCccccCCCccCcccccccCCEEEEEeecCCCEEEEEeCCCCce
Confidence 7775321 1246899999999985 34 4778765321 000 0123468999999999999999999864 5
Q ss_pred eeeeeeccccCCCceEEEEeecCCceeEEEeee
Q psy17782 174 LGIAFQGLQHVQEPLYPMICSTAVKTQISLEVA 206 (256)
Q Consensus 174 lg~af~~~~~f~~~lyP~~~~~~~~~~v~l~~~ 206 (256)
++++|.. ..|++||||+|++..+...++||.+
T Consensus 153 lI~tF~~-~~Fs~pL~P~F~~~~~~~plticpp 184 (186)
T 3uv9_A 153 LIYKFSQ-CSFSKPVFPYLNPRKCTVPMTLCSP 184 (186)
T ss_dssp EEEEECS-CCCSSCBEEEEECTTCCSCCEECCC
T ss_pred EEEEeCC-cCCCCCEEeEEECCCCCceEEEeCC
Confidence 7788863 5799999999999887888999854
No 6
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=245.37 Aligned_cols=147 Identities=24% Similarity=0.376 Sum_probs=121.6
Q ss_pred eeEeCCCCCCCEEEecCCCceEEe----------CCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEeccc
Q psy17782 38 WTWDRNDKSPDTKLFGKNHRTVNF----------HPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKA 107 (256)
Q Consensus 38 ~~ld~~~~~~~l~ls~d~~~~v~~----------~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~ 107 (256)
++|||+||+++|.||+| +++|++ +|+||+.+.+|||.++|++|||||||+|+++ +.|.||||++++
T Consensus 14 vtLDp~TA~~~L~lSed-~~~v~~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrhYWEVev~~~---~~W~lGV~~~s~ 89 (193)
T 3kb5_A 14 LTFDPSSAHPSLVVSSS-GRRVECSEQKAPPAGEDPRQFDKAVAVVAHQQLSEGEHYWEVDVGDK---PRWALGVIAAEA 89 (193)
T ss_dssp CCBCTTTSCTTEEEETT-TTEEEECCSCCCCCCSCTTSCSSSCEEEBSCCBCSSEEEEEEECTTC---SSEEEEEEETTS
T ss_pred EEECCCCCCCCEEECCC-CCEEEECCcCCCCCCCCccccccccEEccCCcccCCCEEEEEEeCcC---ceEEEEEeeCCc
Confidence 99999999999999999 999986 4778988899999999999999999999985 369999999999
Q ss_pred cccccccccccCCCCceeEEEeC-c---EEEeCCeee-ecCCCCCCCCCCEEEEEEeCCCCEEEEEEcCe----eeeeee
Q psy17782 108 RIHQNAFINLIGKDEHSWGLSHK-G---LIFHGGKFY-NYTKPFPENEATRIGVLFDGIAGTLSFYKDGE----YLGIAF 178 (256)
Q Consensus 108 ~~~~~~~~~~lG~~~~sw~~~~~-g---~~~h~~~~~-~~~~~~~~~~~~~IGv~LD~~~G~lsFy~~g~----~lg~af 178 (256)
.|++. ..++.++++|++.+. + .++|+.... .+..+ ...+.||||+|||++|+||||++.+ .++++|
T Consensus 90 ~Rkg~---~~~~~~~~~W~l~~~~~~~y~~~~~~~~~~~l~~~--~~~~~rVGVfLDye~G~lSFY~v~~~~~~s~I~tF 164 (193)
T 3kb5_A 90 PRRGR---LHAVPSQGLWLLGLREGKILEAHVEAKEPRALRSP--ERRPTRIGLYLSFGDGVLSFYDASDADALVPLFAF 164 (193)
T ss_dssp CCSSS---CCCSGGGTEEEEEEETTTEEEECCSSSSCEECCCC--SSCCSEEEEEEETTTTEEEEEECCSTTCCEEEEEE
T ss_pred CcCCC---cCCCCCCCEEEEEEeCCCEEEEEeCCCccEEEeec--CCCCCEEEEEEEcCCCEEEEEeCCCCCCceEEEEe
Confidence 99864 246778899999873 3 245554322 13210 2357899999999999999999875 677877
Q ss_pred eccccCCCceEEEEeec
Q psy17782 179 QGLQHVQEPLYPMICST 195 (256)
Q Consensus 179 ~~~~~f~~~lyP~~~~~ 195 (256)
+ ..|++||||+|++.
T Consensus 165 ~--~~Ft~pl~P~F~~~ 179 (193)
T 3kb5_A 165 H--ERLPRPVYPFFDVC 179 (193)
T ss_dssp C--SCCCSCEEEEEECC
T ss_pred C--CCCCCCeECEEEcc
Confidence 6 57999999999984
No 7
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=100.00 E-value=4.2e-36 Score=251.27 Aligned_cols=166 Identities=28% Similarity=0.515 Sum_probs=135.8
Q ss_pred ceeEeCCCCCCCEEEecCCCc-eEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEeccccccccccc
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHR-TVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFI 115 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~-~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~~~~~~~~~ 115 (256)
+++|||++|+++|.||+| ++ +++++|.+ +.+.+|||+++|++|||||||+|.+...++.|.||||++++++++.+..
T Consensus 32 ~~tldp~ta~~~L~lsed-~~~~~~~~~~~-~~~~~Vlg~~~f~sGrhYWEV~v~~~~~~~~w~vGV~~~~~~r~~~g~~ 109 (212)
T 2jk9_A 32 LHSWNNNDRSLNVFVKED-DKLIFHRHPVA-QSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYT 109 (212)
T ss_dssp HTSEEEEEECTTEEEETT-EEEEEEECCBT-TEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCCEEESSC
T ss_pred ccccChhhcCCceEEeCC-CeEEEEECCCC-CccceEEcCCCccCCeEEEEEEEecccCCCcEEEEEEcCCccccccCcc
Confidence 489999999999999998 64 77766664 5788999999999999999999986444568999999999988533334
Q ss_pred cccCCCCceeEEEe-CcEEEeCCeee---ecCCCC----CCCCCCEEEEEEeCCCCEEEEEEcCeeeeeeeeccccCCCc
Q psy17782 116 NLIGKDEHSWGLSH-KGLIFHGGKFY---NYTKPF----PENEATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEP 187 (256)
Q Consensus 116 ~~lG~~~~sw~~~~-~g~~~h~~~~~---~~~~~~----~~~~~~~IGv~LD~~~G~lsFy~~g~~lg~af~~~~~f~~~ 187 (256)
..+|.+..||++.. ++.+||++... .++..+ ....+++|||+|||++|+|+||+|++.++++|+.. ++++
T Consensus 110 ~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~--~~~~ 187 (212)
T 2jk9_A 110 TLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGL--KGKK 187 (212)
T ss_dssp CCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCC--TTCC
T ss_pred cccccCCCcEeeECCCCcEEECCcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccC--CCCE
Confidence 56899999999996 67899987542 233110 01368999999999999999999999999999853 5789
Q ss_pred eEEEEeecCCceeEEEeee
Q psy17782 188 LYPMICSTAVKTQISLEVA 206 (256)
Q Consensus 188 lyP~~~~~~~~~~v~l~~~ 206 (256)
|||+|++..++++|+|++.
T Consensus 188 l~P~f~l~~g~~~v~l~~~ 206 (212)
T 2jk9_A 188 LYPVVSAVWGHCEIRMRYL 206 (212)
T ss_dssp BEEEEEECCTTCEEEEEEE
T ss_pred EeeEEEEEcCCcEEEEEEC
Confidence 9999999888889998864
No 8
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=100.00 E-value=2.7e-36 Score=254.73 Aligned_cols=166 Identities=25% Similarity=0.442 Sum_probs=134.8
Q ss_pred ceeEeCCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEecccccccccccc
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFIN 116 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~~~~~~~~~~ 116 (256)
+++|||++|+++|.||+| +++|+++|.. ..+.+|||+++|++|+|||||+|.+...++.|.||||++++++++.+...
T Consensus 40 ~~tLDp~ta~~~L~lSed-~~~v~~~~~~-~~~~~Vlg~~~f~sGrhYWEV~V~~~~~~~~w~vGV~~~s~~~~r~~~~~ 117 (226)
T 2afj_A 40 HHGWNPKDCSENIDVKEG-GLCFERRPVA-QSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAA 117 (226)
T ss_dssp HHSSCCSSSCCSSEEETT-TTEEECSSCT-TTSSSEEECCCCCCSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSC
T ss_pred ccEEccccCCCCEEEeCC-CEEEEECCCC-CCcCeEEECCCccCCEEEEEEEEeccCCCCCEEEEecCCccccccccccc
Confidence 589999999999999999 8999987654 34569999999999999999999874434679999999999755433345
Q ss_pred ccCCCCceeEEEe-CcEEEeCCeeee---cCCC---CCCCCCCEEEEEEeCCCCEEEEEEcCeeeeeeeeccccCCCceE
Q psy17782 117 LIGKDEHSWGLSH-KGLIFHGGKFYN---YTKP---FPENEATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLY 189 (256)
Q Consensus 117 ~lG~~~~sw~~~~-~g~~~h~~~~~~---~~~~---~~~~~~~~IGv~LD~~~G~lsFy~~g~~lg~af~~~~~f~~~ly 189 (256)
.+|.+..||++.+ +|.+||++.... ++.. .....+++|||+|||++|+||||+|++.++++|+. .++++||
T Consensus 118 ~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~--~~~~~L~ 195 (226)
T 2afj_A 118 LLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRG--LKGRTLY 195 (226)
T ss_dssp CCCCSCEEEEEEGGGTSTTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHH--HHHHCCE
T ss_pred cccCCCCcEEEEcCCCeEEECccccCcccccccccCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEc--CCCCEEE
Confidence 6899999999995 567888876322 3210 01236899999999999999999999999999986 3567999
Q ss_pred EEEeecCCceeEEEeee
Q psy17782 190 PMICSTAVKTQISLEVA 206 (256)
Q Consensus 190 P~~~~~~~~~~v~l~~~ 206 (256)
|+|++.+++++|+|+..
T Consensus 196 P~f~l~~g~~~v~l~~~ 212 (226)
T 2afj_A 196 PSVSAVWGQCQVRIRYM 212 (226)
T ss_dssp EEEEECCTTSCCEEEEE
T ss_pred EEEEcccCCCEEEEEEc
Confidence 99999877788888754
No 9
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=100.00 E-value=4.7e-33 Score=265.43 Aligned_cols=166 Identities=20% Similarity=0.313 Sum_probs=127.8
Q ss_pred cccccCCCCceeEeCCCCCCCEEEecCCCceEEe-----------------CCCCCCCcceEEecccccCceEEEEEEEe
Q psy17782 28 DMFKYGCDDWWTWDRNDKSPDTKLFGKNHRTVNF-----------------HPTWSKGAAGIRGTRQLNNGRYYWELATS 90 (256)
Q Consensus 28 ~~~~~~~~~~~~ld~~~~~~~l~ls~d~~~~v~~-----------------~p~r~~~~~~V~g~~~~~sG~hYWEV~v~ 90 (256)
..++|.++ ++|||+||| +|.||+| +|+|++ +|+||+.+.+|||.++|++|||||||+|+
T Consensus 404 ~~~~~~v~--vtldp~ta~-~l~~s~d-~r~v~~~~~~~~~~~p~~~~~~~~~~rF~~~~~VLg~~~f~sGrhyWEV~v~ 479 (602)
T 4b3n_A 404 DARRYWVD--VTLATNNIS-HAVIAED-KRQVSSRNPQIMYQAPGTLFTFPSLTNFNYCTGVLGSQSITSGKHYWEVDVS 479 (602)
T ss_dssp HHHTTBCC--CCEECCSCC-SCEECTT-SSEEECCCC--------------------CCCCEEESSCBSSSEEEEEEECT
T ss_pred HHHheEEE--EEeCCCCCC-ceeEecC-CCEEEECCccccccCCCccCCCCCcccCCCCCEeccCCCCCCEEEEEEEEEC
Confidence 45789997 999999999 5889999 999985 45799999999999999999999999998
Q ss_pred ccccCceEEEEEEeccccccccc--cccccCCCCceeEEEe-Cc---EEEeCCeee--------ecCCCCCCCCCCEEEE
Q psy17782 91 QRLFGTSMMFGIGTRKARIHQNA--FINLIGKDEHSWGLSH-KG---LIFHGGKFY--------NYTKPFPENEATRIGV 156 (256)
Q Consensus 91 ~~~~~~~~~vGv~~~~~~~~~~~--~~~~lG~~~~sw~~~~-~g---~~~h~~~~~--------~~~~~~~~~~~~~IGv 156 (256)
++ +.|.||||+....+.+.. -...++++.++|++++ +| .++|++... ++. ....+.||||
T Consensus 480 ~~---~~w~~Gv~~~~~~~~~~~~~~~~~~~~~~g~w~~~~~~~~~y~~~~~~~~~~~~~~~~~~l~---~~~~~~rvgv 553 (602)
T 4b3n_A 480 KK---SAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLS---VIICPDRVGV 553 (602)
T ss_dssp TC---SCEEEEEECCCCTTTSSTHHHHCCCCGGGTEEEEEEETTTEEEEEECCCSSCCSSCEEEECC---CSSCCSEEEE
T ss_pred CC---eeEEEEEeeccccccccccCCCcccCCCCcEEEEEEecCCeEEEEeCCCcccccCCcccccc---cCCCCCEEEE
Confidence 86 479999998654433210 1235788999999986 44 467776432 122 2346899999
Q ss_pred EEeCCCCEEEEEEcCe--eeeeeeeccccCCCceEEEEeecCCceeEEEe
Q psy17782 157 LFDGIAGTLSFYKDGE--YLGIAFQGLQHVQEPLYPMICSTAVKTQISLE 204 (256)
Q Consensus 157 ~LD~~~G~lsFy~~g~--~lg~af~~~~~f~~~lyP~~~~~~~~~~v~l~ 204 (256)
||||++|+||||++.+ .++++|+. ..|++||||+|++..+..+++||
T Consensus 554 ~ld~~~g~~sFy~~~~~~~~i~tf~~-~~f~~~l~P~f~~~~~~~~l~iC 602 (602)
T 4b3n_A 554 FVDYEACTVSFFNITNHGFLIYKFSQ-CSFSKPVFPYLNPRKCTVPMTLC 602 (602)
T ss_dssp EEETTTTEEEEEETTTTTEEEEEECS-CCCCSCBEEEEECTTCSSCEEEC
T ss_pred EEecCCCEEEEEeCCCCceeeEeCCC-cCCCCCEeCeEECCCCCCceEeC
Confidence 9999999999999854 57788863 57999999999998777788886
No 10
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.98 E-value=1.7e-31 Score=223.24 Aligned_cols=154 Identities=20% Similarity=0.367 Sum_probs=133.8
Q ss_pred ceeEeCCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEecccccccccccc
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFIN 116 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~~~~~~~~~~ 116 (256)
+++||+++++++|.||+| +++|+. +..+.+|||+.++++|+|||||+|.+...++.|+|||+++.++++ .
T Consensus 12 ~v~ld~~d~~~~l~ls~d-~l~v~~----~~~~~~vra~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~-----~ 81 (213)
T 3toj_A 12 RVLLALHDRAPQLKISDD-RLTVVG----EKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQ-----A 81 (213)
T ss_dssp CCCEEEEEECTTSEECTT-SSEEEC----CSSCEEEEESCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTT-----S
T ss_pred eEEechhhCCCCEEEcCC-CcEEEe----CCceeEEEeCCCccCCeEEEEEEEeecCCCceEEEEeccCCcccc-----c
Confidence 489999999999999999 899986 467899999999999999999999986445689999999988775 3
Q ss_pred ccCCCCceeEEE-eCcEEEeCCeeeecCCCCCCCCCCEEEEEEeCCC--------CEEEEEEcCeeeeeeeeccccCCCc
Q psy17782 117 LIGKDEHSWGLS-HKGLIFHGGKFYNYTKPFPENEATRIGVLFDGIA--------GTLSFYKDGEYLGIAFQGLQHVQEP 187 (256)
Q Consensus 117 ~lG~~~~sw~~~-~~g~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~--------G~lsFy~~g~~lg~af~~~~~f~~~ 187 (256)
.+|.+..||+|+ .+|.+||++..+.|+.+|. .+|+|||+||+++ |+|+||+||+.+|+||+.+ +.++
T Consensus 82 ~~G~d~~S~gy~~~~G~~~h~~~~~~yg~~~~--~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF~~~--~~~~ 157 (213)
T 3toj_A 82 PLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYG--QGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAYKDI--FEGV 157 (213)
T ss_dssp CTTSSTTEEEEETTTTCEEETTEEECCSCCCC--TTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEEESC--CSSC
T ss_pred CCCCCCCcEEEECCCCeEEeCCcCcccCCCCC--CCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeEEcC--CCCc
Confidence 699999999997 4789999998888987765 7899999999998 7999999999999999964 4679
Q ss_pred eEEEEeecCCceeEEEee
Q psy17782 188 LYPMICSTAVKTQISLEV 205 (256)
Q Consensus 188 lyP~~~~~~~~~~v~l~~ 205 (256)
|||+|++.. +++|+++.
T Consensus 158 lyPavsl~~-~~~v~~NF 174 (213)
T 3toj_A 158 YFPAISLYK-SCTVSINF 174 (213)
T ss_dssp BEEEEEEES-SCEEEEEC
T ss_pred EEEEEEcCC-CCEEEEEC
Confidence 999999844 45566654
No 11
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.94 E-value=6e-26 Score=183.34 Aligned_cols=151 Identities=15% Similarity=0.272 Sum_probs=123.6
Q ss_pred CCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEeccccCceEEEEEEeccccccccccccccCCC
Q psy17782 42 RNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQRLFGTSMMFGIGTRKARIHQNAFINLIGKD 121 (256)
Q Consensus 42 ~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~~~~~~~~~vGv~~~~~~~~~~~~~~~lG~~ 121 (256)
++++++.|.+++| . +++++. ...+.+||++.++.+|+|||||+|.+....+.++|||+++.+++. ..+|++
T Consensus 4 ~~dr~~~l~~~~d-~--l~~~~~-~~~~~~vra~~p~~~g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~-----~~~G~d 74 (171)
T 2yyo_A 4 GSSGFKHILVDGD-T--LSYHGN-SGEVGCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLD-----HQPGWL 74 (171)
T ss_dssp --CEEESEEEETT-E--EEECCC-SSCCEEEECSSCCCSSSCEEEEEEEEETTTCCCEEEEECTTCCTT-----SCTTSS
T ss_pred cccCcceEEEcCC-E--EEEeCC-CCceeEEEECCCCCCCCEEEEEEEEECCCCcEEEEEecCCCCCCc-----cCCCcc
Confidence 3566778888876 4 445544 246889999999999999999999987555689999999988765 368999
Q ss_pred CceeEEEe-CcEEEeCC-eeeecCCCCCCCCCCEEEEEEeCC-----CCEEEEEEcCeeeeeeeeccccCCCceEEEEee
Q psy17782 122 EHSWGLSH-KGLIFHGG-KFYNYTKPFPENEATRIGVLFDGI-----AGTLSFYKDGEYLGIAFQGLQHVQEPLYPMICS 194 (256)
Q Consensus 122 ~~sw~~~~-~g~~~h~~-~~~~~~~~~~~~~~~~IGv~LD~~-----~G~lsFy~~g~~lg~af~~~~~f~~~lyP~~~~ 194 (256)
..||+|+. +|.+||+. ....|+.+|. .+|+|||+||++ .++|+|++||+.|+.||+.+. .++|||+|++
T Consensus 75 ~~S~gy~~~dG~~~~~~~~~~~yg~~f~--~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~~~--~~~lyPaV~l 150 (171)
T 2yyo_A 75 PDSVAYHADDGKLYNGRAKGRQFGSKCN--SGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMS--PDGLFPAVGM 150 (171)
T ss_dssp TTCEEEETTTCCEESSSSCCBCCSCCCC--TTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEESSC--SSSCEEEEEE
T ss_pred CCEEEEEcCCCeEEeCCCCCCcCCCCCC--CCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecCCc--CCCEEEEEEE
Confidence 99999997 68899974 4567887775 789999999998 499999999999999999743 3689999999
Q ss_pred cCCceeEEEee
Q psy17782 195 TAVKTQISLEV 205 (256)
Q Consensus 195 ~~~~~~v~l~~ 205 (256)
...+++|+++.
T Consensus 151 ~~~g~~v~vNF 161 (171)
T 2yyo_A 151 HSLGEEVRLHL 161 (171)
T ss_dssp CSTTEEEEEET
T ss_pred ecCCCEEEEEC
Confidence 87677777774
No 12
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=1.1e-07 Score=75.87 Aligned_cols=155 Identities=19% Similarity=0.263 Sum_probs=106.9
Q ss_pred eeEeCCCCCCCEEEecCCCceEEeC-C-CCCCCcceEEecccccCceEEEEEEEec--cccCceEEEEEEecc-cccccc
Q psy17782 38 WTWDRNDKSPDTKLFGKNHRTVNFH-P-TWSKGAAGIRGTRQLNNGRYYWELATSQ--RLFGTSMMFGIGTRK-ARIHQN 112 (256)
Q Consensus 38 ~~ld~~~~~~~l~ls~d~~~~v~~~-p-~r~~~~~~V~g~~~~~sG~hYWEV~v~~--~~~~~~~~vGv~~~~-~~~~~~ 112 (256)
++|.+ ....++.|+++ ++++++. | ..| ..+-|+.++++..|.. |+|++.+ ..++.+.++||++-+ ..++-.
T Consensus 7 l~FH~-~hG~nI~L~~~-~~~A~R~~~~~~f-~~givFS~rPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~dP~~l~lP 82 (170)
T 2e63_A 7 GELHP-RTGRLVSLSAC-GRTARRQQPGQEF-NHGLVLSREPLRDGRV-FTVRIDRKVNSWSGSIEIGVTALDPSVLDFP 82 (170)
T ss_dssp SCCCS-CCCSSEEECSS-SCEEEESCTTTCS-CSCCEEEEEEECTTCE-EEEEEEEECCSSCCCCEEEEESSCTTSCCCC
T ss_pred ccccc-ccCCCeEECCC-CeEEEeCCCCccc-CceEEEECCCCCCCCE-EEEEEEeecCCcceeEEEEEEccChhhccCC
Confidence 57777 56899999998 8999885 2 334 4568999999988874 5677654 345668999999863 222211
Q ss_pred ccccccCCCCceeEEEeCcEEEeCCee--eecCCCC-CCCCCCEEEEEEeCCCCEEEEEEcCeeeeeeeeccccCCCceE
Q psy17782 113 AFINLIGKDEHSWGLSHKGLIFHGGKF--YNYTKPF-PENEATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLY 189 (256)
Q Consensus 113 ~~~~~lG~~~~sw~~~~~g~~~h~~~~--~~~~~~~-~~~~~~~IGv~LD~~~G~lsFy~~g~~lg~af~~~~~f~~~ly 189 (256)
. ....-..++|.+... ...+++.. +.|+... ....+++||+.++- .|+|.|+.||...|.++++. ..+||
T Consensus 83 ~--~~~~L~~~~Wv~~~~-~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~-~G~l~~~iNg~~~g~~~~~i---p~~Lw 155 (170)
T 2e63_A 83 S--SATGLKGGSWVVSGC-SVLRDGRSVLEEYGQDLDQLGEGDRVGVERTV-AGELRLWVNGRDCGVAATGL---PPRVW 155 (170)
T ss_dssp S--SGGGCCSSEEEESSS-EEEESSCEEEESCSSCGGGCCSSCCEEEEECT-TSCEEEEESSCEEEEEECCC---CSCEE
T ss_pred C--ChhhCCCCeEEEecc-ccccCCcccchhccccccccCCCCEEEEEEcC-CcEEEEEECCccceeeEcCC---CCcEE
Confidence 1 112224588998642 34455432 2343200 01368999999995 49999999999999988753 36999
Q ss_pred EEEeecCCceeEEE
Q psy17782 190 PMICSTAVKTQISL 203 (256)
Q Consensus 190 P~~~~~~~~~~v~l 203 (256)
+.|.++....+|+|
T Consensus 156 avvDvyG~t~~V~i 169 (170)
T 2e63_A 156 AVVDLYGKCTQITV 169 (170)
T ss_dssp EEEECCTTEEEEEE
T ss_pred EEEEccCCEEEEEE
Confidence 99999877777776
No 13
>2jz3_A Suppressor of cytokine signaling 3; SOCS proteins, elongins, cytokine signaling, growth regulati phosphoprotein, SH2 domain; NMR {Mus musculus}
Probab=98.54 E-value=8.2e-08 Score=57.66 Aligned_cols=35 Identities=26% Similarity=0.646 Sum_probs=30.3
Q ss_pred ccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHH
Q psy17782 210 FINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 210 ~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~ 245 (256)
+.|||++||.+|+++++... ..||||..||+||.+
T Consensus 1 v~sLQHLCR~~I~~~~~~~~-~~LpLP~~Lk~yL~e 35 (40)
T 2jz3_A 1 VATLQHLCRKTVNGHLDSYE-KVTQLPGPIREFLDQ 35 (40)
T ss_pred CccHHHHHHHHHHHHcCCCc-ccCCCCHHHHHHHHH
Confidence 36899999999999985542 699999999999975
No 14
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=98.50 E-value=5.6e-06 Score=65.75 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=104.8
Q ss_pred ceeEeCCCCCCCEEEecCCCceEEeCCCCCCCcceEEecccccCceEEEEEEEec--cccCceEEEEEEecc-cccccc-
Q psy17782 37 WWTWDRNDKSPDTKLFGKNHRTVNFHPTWSKGAAGIRGTRQLNNGRYYWELATSQ--RLFGTSMMFGIGTRK-ARIHQN- 112 (256)
Q Consensus 37 ~~~ld~~~~~~~l~ls~d~~~~v~~~p~r~~~~~~V~g~~~~~sG~hYWEV~v~~--~~~~~~~~vGv~~~~-~~~~~~- 112 (256)
+++|.+ ..+.++.|+++ ++++++.. .| ..+-|+.++++..|.. ++|++.+ ..++.+.++||+.-+ ..++..
T Consensus 8 ~l~FH~-~~G~nI~L~~~-~~~A~R~~-sf-~~givFS~RPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~l 82 (168)
T 2yue_A 8 PLQFHS-VHGDNIRISRD-GTLARRFE-SF-CRAITFSARPVRINER-ICVKFAEISNNWNGGIRFGFTSNDPVTLEGTL 82 (168)
T ss_dssp SCCEEE-EECTTEEECCS-SCCEEECS-CS-SCCEEEESSCCCSSCC-EEEEEEECCSSSSSCCEEEEESSCGGGTTTCC
T ss_pred Cccccc-ccCCCeEECCC-CcEEEecc-cC-CceEEEECCCCcCCCE-EEEEEEeecCCcceeEEEeeeecCHHHcCCCC
Confidence 367876 66899999998 89999863 34 4568999999987764 4666654 345668999999863 222210
Q ss_pred -ccc-cccCCCCceeEEEeCcEEEeCCeeeecCCCCCCCCCCEEEEEEeCCCCEEEEEEcCeeeeeeeeccccCCCceEE
Q psy17782 113 -AFI-NLIGKDEHSWGLSHKGLIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSFYKDGEYLGIAFQGLQHVQEPLYP 190 (256)
Q Consensus 113 -~~~-~~lG~~~~sw~~~~~g~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~G~lsFy~~g~~lg~af~~~~~f~~~lyP 190 (256)
.+. .-|-...++|.... +..+. ..+++|++++| ..|+|.|+.||+..+.+++... -++|||+
T Consensus 83 P~~a~~dL~~~~~~W~~~l-------------~~~~~-~~g~~l~f~v~-~~G~l~~~iNg~~~g~~~~~V~-~~~pLwa 146 (168)
T 2yue_A 83 PKYACPDLTNRPGFWAKAL-------------HEQYC-EKDNILYYYVN-GAGDVIYGINNEEKGVILTGID-TRSLLWT 146 (168)
T ss_dssp CSSSSSHHHHSTTBCCEEC-------------CSTTC-CSSCEEEEEEC-TTSEEEEEESSCEEEEEEECCC-CSSCCEE
T ss_pred CCcCchHHhcCCCEEEEEe-------------ccccc-cCCCEEEEEEc-CCCEEEEEECCCccEEEEcCCC-CCCceEE
Confidence 000 11223456786532 22121 25799999998 6799999999999998887543 4579999
Q ss_pred EEeecCCceeEEEeee
Q psy17782 191 MICSTAVKTQISLEVA 206 (256)
Q Consensus 191 ~~~~~~~~~~v~l~~~ 206 (256)
.|.++....+|+|.+.
T Consensus 147 vvDvyG~t~~V~il~~ 162 (168)
T 2yue_A 147 VIDIYGNCTGIEFLDS 162 (168)
T ss_dssp EEECCSSCSEEEEECH
T ss_pred EEEccCCeEEEEEecc
Confidence 9999988888998753
No 15
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Probab=97.73 E-value=7.9e-06 Score=66.09 Aligned_cols=37 Identities=24% Similarity=0.536 Sum_probs=34.1
Q ss_pred cccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHH
Q psy17782 209 DFINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 209 ~~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~ 245 (256)
.+.+||++||.+|+++++.+.|.+||||..||.||.+
T Consensus 135 ~p~sLqhLcR~~i~~~~~~~~i~~LPLP~~Lk~yl~~ 171 (187)
T 2izv_A 135 FPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKE 171 (187)
T ss_dssp SCCCHHHHHHHHHHHHSCHHHHHTSSSCHHHHHHHTS
T ss_pred ccccHHHHHHHHHHhhcCcCcccccCCCHHHHHHHHh
Confidence 3679999999999999988999999999999999974
No 16
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Probab=97.29 E-value=0.00016 Score=57.34 Aligned_cols=45 Identities=29% Similarity=0.383 Sum_probs=36.3
Q ss_pred eeEEEeeec-ccccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHH
Q psy17782 199 TQISLEVAR-RDFINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 199 ~~v~l~~~~-~~~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~ 245 (256)
..+.|..+. ..+.+||++||.+|++++ +.|.+||||+.||+||++
T Consensus 119 ~~~~L~~P~~~~~~sLqhlcR~~i~~~~--~~~~~lplp~~l~~yl~~ 164 (169)
T 2c9w_A 119 VHLYLTKPLYTSAPSLQHLCRLTINKCT--GAIWGLPLPTRLKDYLEE 164 (169)
T ss_dssp -CCCCCCBCCSSCCCHHHHHHHHHHHHC--SCGGGSSSCHHHHHHHHT
T ss_pred ccceecCccccccccHHHHHHHHHHHhh--cchhhCCCCHHHHHHHHh
Confidence 445555432 347899999999999998 689999999999999975
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=88.34 E-value=0.32 Score=39.94 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=33.7
Q ss_pred cccchhHHHHHHHHhccCc---CCcCcCCCChhHHHHHHH
Q psy17782 209 DFINLQDRCRSIIIKTMNQ---ADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 209 ~~~sLq~lcr~~Ir~~~~~---~~i~~l~LP~~l~~~l~~ 245 (256)
.+.+++++|+..||...|. +.+.++++|..+++||+|
T Consensus 221 ~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~~ 260 (261)
T 2xai_A 221 GPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLH 260 (261)
T ss_dssp CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHTT
T ss_pred CCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHhh
Confidence 4788999999999999998 788999999999999976
No 18
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=86.96 E-value=0.9 Score=35.25 Aligned_cols=36 Identities=11% Similarity=0.349 Sum_probs=33.1
Q ss_pred ccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHH
Q psy17782 210 FINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 210 ~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~ 245 (256)
..+|++.|..+||..+.++.+.+|.||..|+.-|..
T Consensus 105 v~SLke~cl~~ir~l~~~~~~~~Leipr~L~~el~~ 140 (163)
T 4ajy_V 105 VYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLED 140 (163)
T ss_dssp CCCHHHHHHHHHHHHSCGGGGGGSCSCTHHHHHHHS
T ss_pred chhHHHHHHHHHHHhcCHhHhhhccccHHHHHHHHh
Confidence 789999999999999999999999999999988753
No 19
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=82.63 E-value=1.7 Score=33.67 Aligned_cols=36 Identities=11% Similarity=0.349 Sum_probs=32.9
Q ss_pred ccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHH
Q psy17782 210 FINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEE 245 (256)
Q Consensus 210 ~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~ 245 (256)
..+|++.|-..||..+.++.+..|.||..|+.=|+.
T Consensus 102 v~tL~e~cl~~Ir~l~~~~~~~~leipr~L~~el~~ 137 (160)
T 1lm8_V 102 VYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLED 137 (160)
T ss_dssp CCCHHHHHHHHHHHHSCGGGGGGSCSCHHHHHHHHS
T ss_pred chhHHHHHHHHHHHhcChhhcccccccHHHHHHHHH
Confidence 689999999999999999679999999999998864
No 20
>4hg1_A Putative cytoplasmic protein; PSI-biology, MCSG, midwest center for structural genomics; HET: MLY MSE MLZ PG4; 1.75A {Salmonella enterica subsp} PDB: 4hg1_C* 4hg1_B*
Probab=57.47 E-value=3.1 Score=32.51 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=35.3
Q ss_pred cccccchhHHHHHHHHhccCcCCcCcCCCChhHHHHHHHh
Q psy17782 207 RRDFINLQDRCRSIIIKTMNQADLDLVKLPTPIRTYIEEA 246 (256)
Q Consensus 207 ~~~~~sLq~lcr~~Ir~~~~~~~i~~l~LP~~l~~~l~~~ 246 (256)
.+.|.+-..+.|.++|+...+......+||.+||.-|+|-
T Consensus 23 ~p~Pmp~eei~rLRvRKYR~PqntET~~LPeSLkALLAYD 62 (225)
T 4hg1_A 23 VPTPMSAEEISRLRVRKYRDPQNTETTELPESLXALLAYD 62 (225)
T ss_dssp SCCCCCHHHHHHCEEESBSCTTCCCEECCCHHHHHHHHHC
T ss_pred CCCCCCHHHHhHHHHHhhcCCCccccccCcHHHHHHHHhh
Confidence 4568888899999999988888899999999999999874
No 21
>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1
Probab=21.57 E-value=1.5e+02 Score=22.04 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=42.2
Q ss_pred EeccccCceEEEEEEeccccccccccccccCCCCceeEEEe-CcEEEeCCeeeecCCCCCCCCCCEEEEEEeCCCCEEEE
Q psy17782 89 TSQRLFGTSMMFGIGTRKARIHQNAFINLIGKDEHSWGLSH-KGLIFHGGKFYNYTKPFPENEATRIGVLFDGIAGTLSF 167 (256)
Q Consensus 89 v~~~~~~~~~~vGv~~~~~~~~~~~~~~~lG~~~~sw~~~~-~g~~~h~~~~~~~~~~~~~~~~~~IGv~LD~~~G~lsF 167 (256)
+.+...|...++|+..+.+-.+. + .....|-|+. ++.+||.|... | ..-.++.+.+|||.-+|-+
T Consensus 28 vQd~~tg~VLMlayMN~EAl~~T------l-~tg~~~y~SRSR~~LW~KGetS--G-----~~Q~v~~i~~DCD~D~LL~ 93 (138)
T 1zps_A 28 AQDHETGEVLMVAYMNREALRRT------L-ETGTAHYWSTSRGKLWLKGESS--G-----HVQRVKDVLVDCDGDAVVL 93 (138)
T ss_dssp EEETTTCCEEEEEEECHHHHHHH------H-HHSBCEEEETTTTEEEETTTTT--S-----CCEEEEEEEECTTSSEEEE
T ss_pred EEECCCCCEEEEEecCHHHHHHH------H-hcCcEEEEcCCCCccccCccCC--C-----CcEEEEEEEecCCCCEEEE
Confidence 33333345678888876543321 1 1234466664 45899988642 2 1346889999999999977
Q ss_pred EEc
Q psy17782 168 YKD 170 (256)
Q Consensus 168 y~~ 170 (256)
-..
T Consensus 94 ~V~ 96 (138)
T 1zps_A 94 KVE 96 (138)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
Done!