RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17792
         (116 letters)



>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium
           carotovorum [TaxId: 554]}
          Length = 204

 Score = 23.4 bits (50), Expect = 7.8
 Identities = 2/20 (10%), Positives = 8/20 (40%)

Query: 88  DRMGRRTLHLYGLGGMFIFS 107
           +  G   +H+      ++ +
Sbjct: 119 ESRGFSPVHVVQGKKAWMTN 138


>d1ap8a_ d.86.1.1 (A:) Translation initiation factor eIF4e
          {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
          4932]}
          Length = 213

 Score = 23.5 bits (50), Expect = 7.9
 Identities = 5/18 (27%), Positives = 13/18 (72%)

Query: 1  MRVEQIAQQSESKISMSE 18
          M VE+++++ E  +S+ +
Sbjct: 1  MSVEEVSKKFEENVSVDD 18


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.138    0.373 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 369,800
Number of extensions: 13685
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 7
Length of query: 116
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 43
Effective length of database: 1,405,306
Effective search space: 60428158
Effective search space used: 60428158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.1 bits)