Query psy17793
Match_columns 397
No_of_seqs 406 out of 2991
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 23:15:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 3.9E-46 1.3E-50 371.1 16.4 229 52-312 112-358 (359)
2 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.8E-43 6E-48 346.1 19.1 219 62-314 79-303 (309)
3 3m6w_A RRNA methylase; rRNA me 100.0 1E-42 3.5E-47 357.1 21.2 221 62-314 78-302 (464)
4 3m4x_A NOL1/NOP2/SUN family pr 100.0 7.4E-43 2.5E-47 357.6 19.3 220 62-314 82-305 (456)
5 2frx_A Hypothetical protein YE 100.0 5E-40 1.7E-44 339.2 22.4 216 62-314 92-313 (479)
6 1ixk_A Methyltransferase; open 100.0 1.6E-39 5.5E-44 318.6 24.6 215 62-312 95-315 (315)
7 2yxl_A PH0851 protein, 450AA l 100.0 1.5E-38 5.1E-43 326.1 17.7 211 62-312 236-449 (450)
8 1sqg_A SUN protein, FMU protei 100.0 3.4E-37 1.2E-41 314.0 21.4 204 62-312 223-429 (429)
9 3ajd_A Putative methyltransfer 100.0 3.6E-37 1.2E-41 295.8 18.8 215 62-312 60-274 (274)
10 4dmg_A Putative uncharacterize 99.8 9.2E-20 3.2E-24 183.6 15.3 193 26-262 159-355 (393)
11 1wxx_A TT1595, hypothetical pr 99.8 4.9E-18 1.7E-22 170.1 14.3 180 44-262 171-354 (382)
12 3id6_C Fibrillarin-like rRNA/T 99.7 1.9E-17 6.4E-22 155.3 14.9 134 82-263 73-213 (232)
13 2as0_A Hypothetical protein PH 99.7 2.9E-17 1E-21 165.0 15.4 176 44-255 178-356 (396)
14 3c0k_A UPF0064 protein YCCW; P 99.7 1.5E-17 5.1E-22 167.3 12.4 181 45-262 182-368 (396)
15 3v97_A Ribosomal RNA large sub 99.7 2.8E-17 9.7E-22 176.7 14.2 179 43-264 499-680 (703)
16 3lpm_A Putative methyltransfer 99.7 1.9E-16 6.5E-21 149.6 16.3 166 64-263 20-198 (259)
17 2b78_A Hypothetical protein SM 99.7 5.3E-17 1.8E-21 163.0 11.7 175 45-255 173-352 (385)
18 2igt_A SAM dependent methyltra 99.7 2.2E-16 7.5E-21 155.5 12.5 163 44-240 110-277 (332)
19 3u81_A Catechol O-methyltransf 99.7 1.2E-15 4.2E-20 140.5 15.1 151 68-261 41-192 (221)
20 3tfw_A Putative O-methyltransf 99.6 2.7E-15 9.1E-20 141.2 16.0 126 69-240 47-174 (248)
21 2b3t_A Protein methyltransfera 99.6 4.4E-15 1.5E-19 141.5 16.6 163 64-255 86-253 (276)
22 2dul_A N(2),N(2)-dimethylguano 99.6 6E-16 2.1E-20 155.0 8.0 136 70-255 32-182 (378)
23 3axs_A Probable N(2),N(2)-dime 99.6 7.8E-16 2.7E-20 154.7 8.2 123 84-255 51-176 (392)
24 3evz_A Methyltransferase; NYSG 99.6 1.1E-14 3.7E-19 134.2 14.6 146 83-263 53-203 (230)
25 3duw_A OMT, O-methyltransferas 99.6 5.7E-15 2E-19 135.6 11.7 129 69-240 42-171 (223)
26 3tma_A Methyltransferase; thum 99.6 1.8E-14 6E-19 142.5 15.5 142 75-261 193-334 (354)
27 3mti_A RRNA methylase; SAM-dep 99.6 1.1E-14 3.7E-19 129.7 12.6 135 83-256 20-157 (185)
28 3e05_A Precorrin-6Y C5,15-meth 99.6 4.9E-14 1.7E-18 127.7 17.0 140 64-256 20-159 (204)
29 2frn_A Hypothetical protein PH 99.6 9.2E-15 3.2E-19 140.0 12.8 125 83-260 123-251 (278)
30 3njr_A Precorrin-6Y methylase; 99.6 4.6E-14 1.6E-18 129.0 15.7 138 70-264 40-178 (204)
31 1yb2_A Hypothetical protein TA 99.6 1.1E-14 3.6E-19 138.9 11.3 146 63-263 88-234 (275)
32 3r3h_A O-methyltransferase, SA 99.6 4.4E-15 1.5E-19 139.5 8.4 130 68-239 43-173 (242)
33 3k6r_A Putative transferase PH 99.5 3E-14 1E-18 136.9 12.7 121 83-255 123-247 (278)
34 2gpy_A O-methyltransferase; st 99.5 5E-14 1.7E-18 130.4 13.6 129 64-239 33-163 (233)
35 1i1n_A Protein-L-isoaspartate 99.5 2.9E-14 1E-18 131.1 11.5 112 83-245 75-191 (226)
36 3eey_A Putative rRNA methylase 99.5 2.7E-14 9.1E-19 128.4 10.5 139 82-255 19-160 (197)
37 4df3_A Fibrillarin-like rRNA/T 99.5 5.9E-14 2E-18 131.5 12.3 110 81-236 73-182 (233)
38 4dzr_A Protein-(glutamine-N5) 99.5 9.4E-15 3.2E-19 132.0 5.4 146 84-253 29-178 (215)
39 3p9n_A Possible methyltransfer 99.5 1.5E-13 5.3E-18 123.1 13.4 111 84-238 43-155 (189)
40 3mb5_A SAM-dependent methyltra 99.5 1.3E-13 4.4E-18 129.1 13.2 131 71-255 79-210 (255)
41 2ozv_A Hypothetical protein AT 99.5 4.7E-14 1.6E-18 133.7 10.2 141 72-235 23-169 (260)
42 1nv8_A HEMK protein; class I a 99.5 1.3E-13 4.3E-18 132.8 12.0 154 64-253 99-262 (284)
43 3dr5_A Putative O-methyltransf 99.5 1E-13 3.5E-18 128.5 10.9 125 69-239 37-166 (221)
44 1o54_A SAM-dependent O-methylt 99.5 8.9E-13 3.1E-17 125.5 17.5 135 75-264 102-237 (277)
45 2qm3_A Predicted methyltransfe 99.5 6.3E-13 2.1E-17 132.5 16.8 153 62-263 148-306 (373)
46 3grz_A L11 mtase, ribosomal pr 99.5 6.7E-13 2.3E-17 120.1 15.1 133 75-263 48-182 (205)
47 3a27_A TYW2, uncharacterized p 99.5 1.1E-13 3.9E-18 132.1 9.9 109 80-240 114-222 (272)
48 1dus_A MJ0882; hypothetical pr 99.5 5E-13 1.7E-17 118.4 13.4 140 72-261 39-180 (194)
49 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.7E-13 1.3E-17 118.3 12.1 134 75-262 15-149 (178)
50 2ift_A Putative methylase HI07 99.5 2.3E-13 8E-18 123.8 10.9 110 85-240 53-167 (201)
51 3c3y_A Pfomt, O-methyltransfer 99.4 4.5E-13 1.5E-17 125.1 12.5 130 69-239 54-184 (237)
52 3dou_A Ribosomal RNA large sub 99.4 3.6E-13 1.2E-17 122.1 11.4 135 83-262 23-160 (191)
53 3dh0_A SAM dependent methyltra 99.4 4.8E-13 1.7E-17 121.8 12.3 140 77-262 29-177 (219)
54 3tr6_A O-methyltransferase; ce 99.4 5.6E-13 1.9E-17 122.2 12.5 128 69-238 48-176 (225)
55 3bt7_A TRNA (uracil-5-)-methyl 99.4 2.3E-13 7.9E-18 135.5 10.4 93 81-177 210-307 (369)
56 2pwy_A TRNA (adenine-N(1)-)-me 99.4 8.8E-13 3E-17 123.1 13.3 135 75-263 86-221 (258)
57 1xxl_A YCGJ protein; structura 99.4 6.3E-13 2.1E-17 123.6 12.0 122 69-238 5-126 (239)
58 2yx1_A Hypothetical protein MJ 99.4 4.5E-13 1.6E-17 131.8 11.5 101 84-240 194-295 (336)
59 1yzh_A TRNA (guanine-N(7)-)-me 99.4 4.8E-12 1.7E-16 115.6 16.7 141 84-264 40-180 (214)
60 2fpo_A Methylase YHHF; structu 99.4 7E-13 2.4E-17 120.7 10.6 109 85-240 54-164 (202)
61 3ntv_A MW1564 protein; rossman 99.4 8.9E-13 3E-17 122.5 11.3 127 65-238 51-178 (232)
62 1i9g_A Hypothetical protein RV 99.4 1.2E-12 3.9E-17 124.2 12.2 118 71-238 85-205 (280)
63 2esr_A Methyltransferase; stru 99.4 1.4E-12 4.9E-17 115.1 11.9 111 83-240 29-142 (177)
64 3vc1_A Geranyl diphosphate 2-C 99.4 9.9E-13 3.4E-17 127.3 11.8 116 76-239 107-224 (312)
65 1xdz_A Methyltransferase GIDB; 99.4 1.4E-12 4.8E-17 121.5 12.4 132 82-262 67-198 (240)
66 4dcm_A Ribosomal RNA large sub 99.4 1.3E-12 4.4E-17 130.7 12.8 128 71-240 208-338 (375)
67 3g89_A Ribosomal RNA small sub 99.4 1.9E-12 6.6E-17 122.1 13.3 132 83-263 78-209 (249)
68 1nt2_A Fibrillarin-like PRE-rR 99.4 2E-12 6.8E-17 118.8 12.9 109 81-236 53-161 (210)
69 3gdh_A Trimethylguanosine synt 99.4 1.1E-12 3.8E-17 121.6 11.4 92 73-179 66-158 (241)
70 1sui_A Caffeoyl-COA O-methyltr 99.4 1.1E-12 3.7E-17 123.5 11.4 129 68-237 62-191 (247)
71 3c3p_A Methyltransferase; NP_9 99.4 4.2E-13 1.4E-17 122.2 8.2 123 69-239 40-163 (210)
72 3lbf_A Protein-L-isoaspartate 99.4 1.1E-12 3.8E-17 119.0 10.9 98 63-174 55-152 (210)
73 1inl_A Spermidine synthase; be 99.4 6.9E-13 2.4E-17 128.3 9.2 138 84-261 89-232 (296)
74 4gek_A TRNA (CMO5U34)-methyltr 99.4 9.4E-13 3.2E-17 125.2 9.9 123 69-238 56-180 (261)
75 3fpf_A Mtnas, putative unchara 99.4 3.9E-12 1.3E-16 123.0 14.2 107 79-236 116-222 (298)
76 3kkz_A Uncharacterized protein 99.4 4.2E-12 1.4E-16 119.7 13.7 112 83-242 44-156 (267)
77 2fhp_A Methylase, putative; al 99.4 3.5E-12 1.2E-16 112.9 12.5 116 83-240 42-158 (187)
78 2f8l_A Hypothetical protein LM 99.4 3.6E-13 1.2E-17 132.6 6.6 163 64-255 105-276 (344)
79 1l3i_A Precorrin-6Y methyltran 99.4 4.6E-12 1.6E-16 111.9 12.9 139 70-262 18-158 (192)
80 3tm4_A TRNA (guanine N2-)-meth 99.4 4.6E-12 1.6E-16 126.4 14.1 136 79-262 212-348 (373)
81 3kr9_A SAM-dependent methyltra 99.4 1.4E-11 4.7E-16 114.8 16.2 125 83-262 13-139 (225)
82 2yxd_A Probable cobalt-precorr 99.4 1.8E-11 6.3E-16 107.4 16.1 134 70-262 20-153 (183)
83 2fca_A TRNA (guanine-N(7)-)-me 99.4 5.9E-12 2E-16 115.6 13.0 140 84-263 37-176 (213)
84 1wy7_A Hypothetical protein PH 99.4 1.2E-11 4.2E-16 111.8 14.9 127 82-263 46-172 (207)
85 2avd_A Catechol-O-methyltransf 99.4 2.2E-12 7.4E-17 118.6 10.1 126 69-238 53-181 (229)
86 3f4k_A Putative methyltransfer 99.4 1E-11 3.4E-16 115.8 14.7 114 80-241 41-155 (257)
87 3cbg_A O-methyltransferase; cy 99.3 2.9E-12 9.9E-17 119.1 10.9 128 69-240 56-186 (232)
88 3dxy_A TRNA (guanine-N(7)-)-me 99.3 9.7E-12 3.3E-16 114.9 14.3 140 85-262 34-173 (218)
89 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.8E-16 115.9 14.8 140 84-261 48-195 (246)
90 1vl5_A Unknown conserved prote 99.3 1.6E-12 5.4E-17 122.0 8.8 128 62-237 14-141 (260)
91 2b25_A Hypothetical protein; s 99.3 6E-12 2.1E-16 123.2 13.3 114 74-235 94-218 (336)
92 2nxc_A L11 mtase, ribosomal pr 99.3 9.6E-12 3.3E-16 117.4 14.2 124 83-263 118-241 (254)
93 2ih2_A Modification methylase 99.3 4.6E-12 1.6E-16 127.2 12.4 156 64-255 18-185 (421)
94 3lec_A NADB-rossmann superfami 99.3 2.3E-11 7.7E-16 113.7 16.1 127 83-263 19-146 (230)
95 1nkv_A Hypothetical protein YJ 99.3 3.3E-12 1.1E-16 119.1 10.1 115 76-238 27-142 (256)
96 3jwh_A HEN1; methyltransferase 99.3 6.4E-12 2.2E-16 114.6 11.4 119 76-238 20-143 (217)
97 1dl5_A Protein-L-isoaspartate 99.3 1.3E-11 4.5E-16 120.1 13.6 93 72-175 62-154 (317)
98 2bm8_A Cephalosporin hydroxyla 99.3 1.5E-12 5.2E-17 121.7 6.7 140 74-262 70-215 (236)
99 1ws6_A Methyltransferase; stru 99.3 7.5E-12 2.6E-16 109.0 10.6 109 85-240 41-151 (171)
100 3gnl_A Uncharacterized protein 99.3 4.4E-11 1.5E-15 112.6 16.3 126 83-262 19-145 (244)
101 2yvl_A TRMI protein, hypotheti 99.3 1.5E-11 5.3E-16 113.9 13.0 113 73-238 79-192 (248)
102 2plw_A Ribosomal RNA methyltra 99.3 1.3E-11 4.5E-16 110.9 12.2 136 83-255 20-170 (201)
103 3dmg_A Probable ribosomal RNA 99.3 3.9E-12 1.3E-16 127.4 9.6 113 84-240 232-344 (381)
104 3dlc_A Putative S-adenosyl-L-m 99.3 1E-11 3.6E-16 112.1 11.5 114 78-239 37-151 (219)
105 3bus_A REBM, methyltransferase 99.3 1.4E-11 4.8E-16 116.0 12.8 116 76-238 52-168 (273)
106 2hnk_A SAM-dependent O-methylt 99.3 9.8E-12 3.4E-16 115.6 11.3 134 69-239 44-184 (239)
107 3jwg_A HEN1, methyltransferase 99.3 9.5E-12 3.3E-16 113.5 10.6 119 76-238 20-143 (219)
108 2okc_A Type I restriction enzy 99.3 3.5E-12 1.2E-16 130.1 8.5 161 64-255 150-329 (445)
109 1o9g_A RRNA methyltransferase; 99.3 2.4E-12 8.1E-17 120.6 6.5 123 84-238 50-216 (250)
110 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.4E-11 4.8E-16 114.0 11.5 110 81-236 73-182 (233)
111 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3.6E-11 1.2E-15 122.2 15.4 89 79-177 280-368 (433)
112 3ofk_A Nodulation protein S; N 99.3 1.6E-11 5.4E-16 111.6 11.5 119 70-236 36-154 (216)
113 2yxe_A Protein-L-isoaspartate 99.3 1.5E-11 5E-16 111.9 11.3 99 65-174 57-155 (215)
114 3ujc_A Phosphoethanolamine N-m 99.3 1.1E-11 3.7E-16 115.7 10.6 115 77-238 47-161 (266)
115 2h1r_A Dimethyladenosine trans 99.3 2.9E-12 9.8E-17 124.1 6.6 94 67-176 24-117 (299)
116 2pbf_A Protein-L-isoaspartate 99.3 1.2E-11 4.2E-16 113.5 10.3 93 76-175 69-172 (227)
117 2h00_A Methyltransferase 10 do 99.3 9.2E-11 3.1E-15 109.7 16.3 85 85-179 65-154 (254)
118 1ej0_A FTSJ; methyltransferase 99.3 1.9E-11 6.6E-16 106.0 10.8 132 83-254 20-151 (180)
119 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.6E-11 8.9E-16 113.4 12.3 141 84-262 45-191 (235)
120 2xvm_A Tellurite resistance pr 99.3 3.9E-11 1.3E-15 107.0 13.0 114 76-236 23-136 (199)
121 3orh_A Guanidinoacetate N-meth 99.3 3.6E-12 1.2E-16 118.9 6.2 113 83-236 58-170 (236)
122 1g8a_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.5E-16 113.5 9.9 109 83-237 71-179 (227)
123 3hem_A Cyclopropane-fatty-acyl 99.3 2.2E-11 7.5E-16 117.0 11.8 123 77-240 64-187 (302)
124 3adn_A Spermidine synthase; am 99.3 2.2E-11 7.4E-16 117.9 11.6 136 84-260 82-224 (294)
125 2nyu_A Putative ribosomal RNA 99.3 2.9E-11 9.9E-16 108.1 11.6 132 83-254 20-160 (196)
126 1jg1_A PIMT;, protein-L-isoasp 99.3 1.5E-11 5.1E-16 114.0 10.0 100 62-174 68-167 (235)
127 1r18_A Protein-L-isoaspartate( 99.3 8.6E-12 2.9E-16 114.9 8.2 98 67-175 64-173 (227)
128 2pjd_A Ribosomal RNA small sub 99.3 1.2E-11 4E-16 121.8 9.7 127 71-241 182-308 (343)
129 1kpg_A CFA synthase;, cyclopro 99.2 3.4E-11 1.2E-15 114.4 12.4 115 77-239 56-171 (287)
130 3dtn_A Putative methyltransfer 99.2 3.2E-11 1.1E-15 111.0 11.7 111 83-240 42-152 (234)
131 1jsx_A Glucose-inhibited divis 99.2 4.3E-11 1.5E-15 108.0 12.1 103 85-238 65-167 (207)
132 2o57_A Putative sarcosine dime 99.2 1.5E-11 5E-16 117.6 9.2 110 82-238 79-189 (297)
133 2jjq_A Uncharacterized RNA met 99.2 4.1E-11 1.4E-15 121.7 12.9 81 80-177 285-365 (425)
134 3q87_B N6 adenine specific DNA 99.2 5.2E-11 1.8E-15 105.3 11.7 141 69-264 5-147 (170)
135 1fbn_A MJ fibrillarin homologu 99.2 2.8E-11 9.6E-16 111.9 10.2 108 81-235 70-177 (230)
136 3gu3_A Methyltransferase; alph 99.2 9.8E-12 3.3E-16 118.7 7.1 122 70-238 7-128 (284)
137 3sm3_A SAM-dependent methyltra 99.2 5.8E-11 2E-15 108.5 11.6 111 84-239 29-144 (235)
138 1zx0_A Guanidinoacetate N-meth 99.2 1.3E-11 4.3E-16 114.5 7.2 115 83-238 58-172 (236)
139 3mgg_A Methyltransferase; NYSG 99.2 2.8E-11 9.6E-16 114.2 9.7 115 76-236 28-142 (276)
140 4fsd_A Arsenic methyltransfera 99.2 4.3E-11 1.5E-15 119.5 11.4 116 83-237 81-204 (383)
141 4htf_A S-adenosylmethionine-de 99.2 5.5E-11 1.9E-15 113.0 11.6 106 85-237 68-174 (285)
142 3ocj_A Putative exported prote 99.2 2.6E-11 9E-16 116.8 9.4 114 82-238 115-229 (305)
143 2ar0_A M.ecoki, type I restric 99.2 1.6E-11 5.6E-16 128.2 8.4 162 64-255 148-334 (541)
144 1pjz_A Thiopurine S-methyltran 99.2 1.3E-11 4.3E-16 112.4 6.2 113 81-239 18-143 (203)
145 1vbf_A 231AA long hypothetical 99.2 4.2E-11 1.5E-15 110.0 9.7 119 64-238 49-167 (231)
146 1ve3_A Hypothetical protein PH 99.2 7.3E-11 2.5E-15 107.6 10.7 108 84-238 37-144 (227)
147 1xtp_A LMAJ004091AAA; SGPP, st 99.2 6.7E-11 2.3E-15 109.9 10.4 136 80-263 88-235 (254)
148 3g5t_A Trans-aconitate 3-methy 99.2 4.8E-11 1.6E-15 114.5 9.5 115 84-238 35-151 (299)
149 3g5l_A Putative S-adenosylmeth 99.2 1E-10 3.4E-15 109.0 11.3 110 78-237 37-146 (253)
150 3ou2_A SAM-dependent methyltra 99.2 6E-11 2.1E-15 107.3 9.4 113 76-239 37-149 (218)
151 2pxx_A Uncharacterized protein 99.2 1.1E-10 3.8E-15 105.2 11.1 121 84-238 41-161 (215)
152 3uwp_A Histone-lysine N-methyl 99.2 1.9E-10 6.4E-15 115.7 13.7 112 78-236 166-288 (438)
153 3cgg_A SAM-dependent methyltra 99.2 1E-09 3.5E-14 96.9 17.1 130 83-264 44-173 (195)
154 1m6y_A S-adenosyl-methyltransf 99.2 4.1E-11 1.4E-15 116.3 8.7 93 77-177 18-110 (301)
155 2fk8_A Methoxy mycolic acid sy 99.2 8.4E-11 2.9E-15 113.6 10.8 117 76-240 81-198 (318)
156 3g2m_A PCZA361.24; SAM-depende 99.2 9.3E-11 3.2E-15 112.4 11.0 113 79-239 77-193 (299)
157 2ex4_A Adrenal gland protein A 99.2 2.1E-10 7.1E-15 106.3 12.9 134 85-264 79-223 (241)
158 3m70_A Tellurite resistance pr 99.2 1.5E-10 5.1E-15 110.1 11.9 109 80-236 115-223 (286)
159 2p41_A Type II methyltransfera 99.2 1.9E-11 6.6E-16 118.8 5.4 127 83-258 80-213 (305)
160 1mjf_A Spermidine synthase; sp 99.2 4.3E-11 1.5E-15 114.7 7.7 113 83-239 73-196 (281)
161 2p35_A Trans-aconitate 2-methy 99.2 1.1E-10 3.8E-15 108.7 10.3 117 70-238 18-134 (259)
162 3g07_A 7SK snRNA methylphospha 99.2 1.8E-10 6.3E-15 110.6 12.1 116 85-237 46-221 (292)
163 3mq2_A 16S rRNA methyltransfer 99.1 8.2E-11 2.8E-15 107.3 9.1 115 80-236 22-140 (218)
164 2p8j_A S-adenosylmethionine-de 99.1 8E-11 2.7E-15 106.1 8.7 112 82-239 20-131 (209)
165 3p2e_A 16S rRNA methylase; met 99.1 6.2E-11 2.1E-15 110.0 8.1 113 84-236 23-139 (225)
166 1zq9_A Probable dimethyladenos 99.1 6.3E-11 2.1E-15 113.9 8.4 92 69-176 12-104 (285)
167 3h2b_A SAM-dependent methyltra 99.1 1.1E-10 3.7E-15 105.0 9.2 127 86-264 42-180 (203)
168 2fyt_A Protein arginine N-meth 99.1 6.3E-11 2.2E-15 116.6 8.3 116 79-239 58-174 (340)
169 2kw5_A SLR1183 protein; struct 99.1 1.6E-10 5.6E-15 103.8 10.3 106 83-238 28-133 (202)
170 1ri5_A MRNA capping enzyme; me 99.1 1.8E-10 6E-15 109.4 10.8 112 83-238 62-176 (298)
171 2o07_A Spermidine synthase; st 99.1 1.2E-10 4.2E-15 113.0 9.9 115 83-238 93-211 (304)
172 3e23_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 101.2 13.5 127 83-263 41-179 (211)
173 3hnr_A Probable methyltransfer 99.1 8.7E-11 3E-15 106.9 8.0 110 81-241 41-150 (220)
174 2p7i_A Hypothetical protein; p 99.1 1.3E-10 4.6E-15 106.7 9.1 103 83-238 40-143 (250)
175 3bkx_A SAM-dependent methyltra 99.1 1.1E-10 3.7E-15 110.0 8.5 91 75-174 33-131 (275)
176 2y1w_A Histone-arginine methyl 99.1 3.6E-10 1.2E-14 111.4 12.5 115 79-240 44-159 (348)
177 3q7e_A Protein arginine N-meth 99.1 1.2E-10 4.2E-15 114.9 9.0 113 83-240 64-177 (349)
178 3l8d_A Methyltransferase; stru 99.1 1.7E-10 5.9E-15 106.2 9.1 131 83-265 51-199 (242)
179 3lkd_A Type I restriction-modi 99.1 3E-10 1E-14 118.6 11.8 177 63-259 195-383 (542)
180 1iy9_A Spermidine synthase; ro 99.1 2.4E-10 8.1E-15 109.3 10.2 113 85-238 75-191 (275)
181 3lcc_A Putative methyl chlorid 99.1 8.2E-11 2.8E-15 108.5 6.7 131 86-264 67-205 (235)
182 1wzn_A SAM-dependent methyltra 99.1 4.8E-10 1.7E-14 104.1 11.6 107 83-236 39-145 (252)
183 2pt6_A Spermidine synthase; tr 99.1 6.3E-11 2.2E-15 115.9 5.5 114 84-238 115-232 (321)
184 3d2l_A SAM-dependent methyltra 99.1 2.3E-10 8E-15 105.3 9.1 108 84-238 32-139 (243)
185 2i7c_A Spermidine synthase; tr 99.1 7.4E-11 2.5E-15 113.3 5.7 115 83-238 76-194 (283)
186 3r0q_C Probable protein argini 99.1 2.8E-10 9.5E-15 113.6 10.1 114 80-239 58-172 (376)
187 2yqz_A Hypothetical protein TT 99.1 1.5E-10 5.1E-15 107.9 7.5 105 82-235 36-140 (263)
188 2vdw_A Vaccinia virus capping 99.1 1.9E-10 6.5E-15 111.5 8.5 118 85-238 48-171 (302)
189 3bwc_A Spermidine synthase; SA 99.1 3.7E-10 1.3E-14 109.4 10.5 116 83-238 93-212 (304)
190 1y8c_A S-adenosylmethionine-de 99.1 3.1E-10 1.1E-14 104.3 9.4 106 85-237 37-143 (246)
191 3m33_A Uncharacterized protein 99.1 1.8E-10 6.3E-15 106.0 7.8 117 83-262 46-163 (226)
192 3fzg_A 16S rRNA methylase; met 99.1 1E-10 3.5E-15 106.1 5.9 108 84-240 48-157 (200)
193 1g6q_1 HnRNP arginine N-methyl 99.1 2.7E-10 9.4E-15 111.4 9.3 114 81-239 34-148 (328)
194 2gb4_A Thiopurine S-methyltran 99.1 1.5E-10 5.2E-15 109.3 7.0 111 82-238 65-193 (252)
195 3b3j_A Histone-arginine methyl 99.1 4.3E-10 1.5E-14 115.8 10.9 112 81-239 154-266 (480)
196 3bkw_A MLL3908 protein, S-aden 99.1 1.5E-10 5E-15 106.6 6.4 111 76-236 34-144 (243)
197 3thr_A Glycine N-methyltransfe 99.1 2E-10 6.8E-15 109.3 7.5 126 76-238 48-177 (293)
198 3i9f_A Putative type 11 methyl 99.1 1.5E-10 5.1E-15 101.2 6.1 103 80-238 12-114 (170)
199 3ldu_A Putative methylase; str 99.1 1.8E-09 6.1E-14 108.2 14.7 102 62-175 166-311 (385)
200 4hg2_A Methyltransferase type 99.0 2.6E-10 8.9E-15 108.1 7.9 102 85-241 39-140 (257)
201 2b2c_A Spermidine synthase; be 99.0 2.7E-10 9.3E-15 111.1 8.0 115 84-239 107-225 (314)
202 3ldg_A Putative uncharacterize 99.0 9.3E-10 3.2E-14 110.3 12.0 85 79-175 188-310 (384)
203 1u2z_A Histone-lysine N-methyl 99.0 2.4E-09 8.1E-14 108.8 15.1 114 79-235 236-358 (433)
204 3ccf_A Cyclopropane-fatty-acyl 99.0 1.6E-10 5.4E-15 109.6 6.0 108 77-238 49-156 (279)
205 2a14_A Indolethylamine N-methy 99.0 3.6E-10 1.2E-14 106.7 8.3 141 82-263 52-235 (263)
206 1uir_A Polyamine aminopropyltr 99.0 9.8E-10 3.4E-14 107.0 11.4 117 84-238 76-197 (314)
207 1ne2_A Hypothetical protein TA 99.0 1.1E-09 3.8E-14 98.5 10.8 73 82-175 48-120 (200)
208 3iv6_A Putative Zn-dependent a 99.0 1.8E-09 6.1E-14 102.7 12.6 114 76-237 36-149 (261)
209 1xj5_A Spermidine synthase 1; 99.0 4E-10 1.4E-14 110.8 8.2 117 83-239 118-238 (334)
210 3khk_A Type I restriction-modi 99.0 1.3E-10 4.6E-15 121.3 5.1 174 63-258 223-420 (544)
211 3bzb_A Uncharacterized protein 99.0 2.1E-09 7.1E-14 102.8 12.7 137 83-263 77-234 (281)
212 3pfg_A N-methyltransferase; N, 99.0 1.6E-09 5.4E-14 101.6 11.6 103 84-236 49-151 (263)
213 2xyq_A Putative 2'-O-methyl tr 99.0 8.1E-10 2.8E-14 106.6 9.8 122 81-255 59-187 (290)
214 2r6z_A UPF0341 protein in RSP 99.0 6E-10 2.1E-14 105.7 8.7 90 75-176 73-172 (258)
215 3k0b_A Predicted N6-adenine-sp 99.0 3.2E-09 1.1E-13 106.6 14.4 85 79-175 195-317 (393)
216 3ll7_A Putative methyltransfer 99.0 7E-10 2.4E-14 111.8 9.4 83 84-178 92-176 (410)
217 2qfm_A Spermine synthase; sper 99.0 6.5E-10 2.2E-14 110.1 8.6 133 85-250 188-328 (364)
218 3gjy_A Spermidine synthase; AP 99.0 1E-09 3.5E-14 107.1 10.0 136 87-262 91-227 (317)
219 3dli_A Methyltransferase; PSI- 99.0 6.1E-10 2.1E-14 103.1 7.9 104 83-238 39-142 (240)
220 2i62_A Nicotinamide N-methyltr 99.0 5.5E-10 1.9E-14 104.1 7.6 142 83-264 54-237 (265)
221 1wg8_A Predicted S-adenosylmet 99.0 2.3E-09 7.8E-14 102.5 11.9 88 77-177 14-101 (285)
222 1qzz_A RDMB, aclacinomycin-10- 99.0 9.8E-09 3.4E-13 101.3 16.9 112 79-237 176-288 (374)
223 2wa2_A Non-structural protein 99.0 2.3E-10 7.9E-15 109.6 4.9 108 83-237 80-194 (276)
224 3ege_A Putative methyltransfer 99.0 2.2E-10 7.6E-15 107.8 4.5 109 75-238 24-132 (261)
225 2r3s_A Uncharacterized protein 99.0 8.8E-09 3E-13 99.8 15.7 115 80-240 158-275 (335)
226 3e8s_A Putative SAM dependent 99.0 9.7E-10 3.3E-14 99.6 8.3 107 80-237 47-153 (227)
227 2oxt_A Nucleoside-2'-O-methylt 99.0 2.5E-10 8.6E-15 108.7 4.5 127 83-259 72-208 (265)
228 3htx_A HEN1; HEN1, small RNA m 99.0 1.1E-09 3.8E-14 117.8 9.5 117 77-237 713-835 (950)
229 4hc4_A Protein arginine N-meth 99.0 1.2E-09 4E-14 109.1 8.9 116 84-245 82-200 (376)
230 2gs9_A Hypothetical protein TT 99.0 4.6E-10 1.6E-14 101.5 5.3 99 85-238 36-134 (211)
231 3ufb_A Type I restriction-modi 99.0 3.2E-09 1.1E-13 110.6 12.3 110 63-179 195-316 (530)
232 2aot_A HMT, histamine N-methyl 98.9 6.3E-10 2.2E-14 106.4 6.1 117 83-238 50-174 (292)
233 1tw3_A COMT, carminomycin 4-O- 98.9 5.6E-09 1.9E-13 102.6 13.0 113 79-238 177-290 (360)
234 3gru_A Dimethyladenosine trans 98.9 3.3E-09 1.1E-13 102.6 11.0 87 73-175 38-124 (295)
235 3bgv_A MRNA CAP guanine-N7 met 98.9 4.7E-09 1.6E-13 101.3 12.1 116 84-238 33-157 (313)
236 3i53_A O-methyltransferase; CO 98.9 2E-08 6.8E-13 97.7 16.7 110 83-239 167-277 (332)
237 3tka_A Ribosomal RNA small sub 98.9 1.6E-09 5.5E-14 105.8 8.5 92 77-178 49-141 (347)
238 1x19_A CRTF-related protein; m 98.9 2.5E-08 8.7E-13 98.1 16.7 114 79-239 184-298 (359)
239 3gwz_A MMCR; methyltransferase 98.9 4.4E-08 1.5E-12 97.0 18.3 115 80-241 197-312 (369)
240 2avn_A Ubiquinone/menaquinone 98.9 1.8E-09 6E-14 101.4 7.6 101 85-238 54-154 (260)
241 3ggd_A SAM-dependent methyltra 98.9 1E-08 3.4E-13 94.9 12.4 112 82-238 53-165 (245)
242 3bxo_A N,N-dimethyltransferase 98.9 2.9E-09 1E-13 97.6 8.5 106 84-239 39-144 (239)
243 3s1s_A Restriction endonucleas 98.9 1.8E-09 6E-14 116.0 7.6 150 63-238 293-467 (878)
244 3dp7_A SAM-dependent methyltra 98.9 2.6E-08 8.9E-13 98.5 15.6 114 84-241 178-292 (363)
245 3v97_A Ribosomal RNA large sub 98.9 9E-09 3.1E-13 110.6 12.3 88 79-175 184-313 (703)
246 1vlm_A SAM-dependent methyltra 98.9 6E-09 2E-13 95.1 9.4 121 85-265 47-187 (219)
247 1p91_A Ribosomal RNA large sub 98.8 3.6E-09 1.2E-13 99.4 7.6 97 84-238 84-180 (269)
248 2oyr_A UPF0341 protein YHIQ; a 98.8 3.8E-09 1.3E-13 100.3 7.5 90 74-176 75-175 (258)
249 2ip2_A Probable phenazine-spec 98.8 3.6E-08 1.2E-12 95.8 14.5 111 81-239 164-275 (334)
250 3mcz_A O-methyltransferase; ad 98.8 2.8E-08 9.5E-13 97.3 13.6 116 81-240 174-291 (352)
251 2g72_A Phenylethanolamine N-me 98.8 1.1E-08 3.8E-13 97.4 10.4 141 84-263 70-253 (289)
252 1yub_A Ermam, rRNA methyltrans 98.8 5.8E-11 2E-15 111.2 -5.5 94 67-177 11-105 (245)
253 3cc8_A Putative methyltransfer 98.8 4E-09 1.4E-13 95.7 6.2 101 84-237 31-131 (230)
254 2cmg_A Spermidine synthase; tr 98.8 7.5E-09 2.6E-13 98.3 7.6 100 84-239 71-174 (262)
255 3tqs_A Ribosomal RNA small sub 98.8 1.5E-08 5.1E-13 95.9 8.9 93 68-174 11-105 (255)
256 4e2x_A TCAB9; kijanose, tetron 98.7 3.4E-08 1.2E-12 99.0 9.6 108 79-236 101-208 (416)
257 2qe6_A Uncharacterized protein 98.7 5.3E-08 1.8E-12 92.8 9.7 119 85-239 77-199 (274)
258 1af7_A Chemotaxis receptor met 98.7 5.7E-08 1.9E-12 92.9 9.8 108 85-235 105-251 (274)
259 3fut_A Dimethyladenosine trans 98.7 4.3E-08 1.5E-12 93.6 8.8 94 65-176 26-121 (271)
260 3sso_A Methyltransferase; macr 98.7 4.1E-08 1.4E-12 98.4 9.0 105 85-238 216-326 (419)
261 3giw_A Protein of unknown func 98.7 2.1E-08 7.2E-13 95.9 6.3 63 86-148 79-143 (277)
262 2zfu_A Nucleomethylin, cerebra 98.7 5.5E-08 1.9E-12 88.0 8.8 118 76-262 58-175 (215)
263 1qam_A ERMC' methyltransferase 98.7 5.6E-08 1.9E-12 91.0 9.0 90 69-175 14-104 (244)
264 3frh_A 16S rRNA methylase; met 98.6 8.8E-08 3E-12 89.8 9.5 71 84-171 104-174 (253)
265 3hp7_A Hemolysin, putative; st 98.6 3.5E-08 1.2E-12 95.2 6.8 99 85-235 85-184 (291)
266 3lcv_B Sisomicin-gentamicin re 98.6 3.3E-08 1.1E-12 93.6 6.2 104 84-234 131-234 (281)
267 3lst_A CALO1 methyltransferase 98.6 2.1E-07 7.2E-12 91.2 12.1 111 79-239 178-289 (348)
268 3uzu_A Ribosomal RNA small sub 98.6 1.2E-07 4.1E-12 90.9 9.6 89 74-174 31-123 (279)
269 3cvo_A Methyltransferase-like 98.6 1.4E-07 4.9E-12 86.2 9.3 60 84-147 29-91 (202)
270 4a6d_A Hydroxyindole O-methylt 98.5 6.4E-07 2.2E-11 88.3 12.6 114 80-240 174-287 (353)
271 2px2_A Genome polyprotein [con 98.5 4.6E-08 1.6E-12 91.9 3.8 127 83-259 71-206 (269)
272 3opn_A Putative hemolysin; str 98.5 3.8E-08 1.3E-12 91.7 2.6 44 84-129 36-79 (232)
273 3ftd_A Dimethyladenosine trans 98.5 2.2E-07 7.7E-12 87.4 7.6 91 69-175 15-105 (249)
274 1qyr_A KSGA, high level kasuga 98.5 1.7E-07 6E-12 88.4 6.4 91 74-176 10-101 (252)
275 2qy6_A UPF0209 protein YFCK; s 98.4 1.2E-06 4E-11 83.0 10.6 134 83-263 58-232 (257)
276 3reo_A (ISO)eugenol O-methyltr 98.4 1.4E-06 4.8E-11 86.2 10.7 104 83-240 201-304 (368)
277 3evf_A RNA-directed RNA polyme 98.3 3.4E-07 1.2E-11 87.0 5.6 133 82-256 71-204 (277)
278 4azs_A Methyltransferase WBDD; 98.3 9.2E-07 3.1E-11 92.7 9.3 75 85-171 66-140 (569)
279 3eld_A Methyltransferase; flav 98.3 4.9E-07 1.7E-11 86.7 5.9 132 83-257 79-212 (300)
280 3p9c_A Caffeic acid O-methyltr 98.3 2.2E-06 7.7E-11 84.7 10.5 104 83-240 199-302 (364)
281 3gcz_A Polyprotein; flavivirus 98.3 3E-07 1E-11 87.5 3.7 130 83-256 88-221 (282)
282 2wk1_A NOVP; transferase, O-me 98.3 2.2E-06 7.6E-11 82.1 9.5 125 86-256 107-263 (282)
283 1fp1_D Isoliquiritigenin 2'-O- 98.2 2.3E-06 7.9E-11 84.6 9.2 102 83-238 207-308 (372)
284 1fp2_A Isoflavone O-methyltran 98.2 3.3E-06 1.1E-10 82.8 9.5 103 83-239 186-291 (352)
285 3o4f_A Spermidine synthase; am 98.2 1.5E-05 5.3E-10 76.6 13.3 132 86-258 84-222 (294)
286 4gqb_A Protein arginine N-meth 98.1 2.7E-06 9.3E-11 89.9 7.5 118 86-248 358-481 (637)
287 3r24_A NSP16, 2'-O-methyl tran 98.1 4.1E-06 1.4E-10 80.0 7.8 123 81-255 105-233 (344)
288 2ld4_A Anamorsin; methyltransf 98.1 2.2E-07 7.6E-12 81.5 -1.1 93 81-236 8-101 (176)
289 1zg3_A Isoflavanone 4'-O-methy 98.1 1.2E-05 4E-10 79.0 11.2 102 84-239 192-296 (358)
290 2oo3_A Protein involved in cat 98.0 9.7E-07 3.3E-11 84.3 1.4 79 85-175 91-169 (283)
291 4auk_A Ribosomal RNA large sub 98.0 8.3E-06 2.8E-10 80.8 7.3 71 83-174 209-279 (375)
292 3ua3_A Protein arginine N-meth 98.0 8.7E-06 3E-10 86.4 7.8 125 86-249 410-549 (745)
293 3c6k_A Spermine synthase; sper 98.0 1.9E-05 6.5E-10 78.5 9.6 119 84-235 204-330 (381)
294 3p8z_A Mtase, non-structural p 97.8 2.5E-05 8.4E-10 72.5 7.0 77 82-173 75-152 (267)
295 3g7u_A Cytosine-specific methy 97.8 6.7E-05 2.3E-09 74.7 10.0 83 87-179 3-85 (376)
296 3lkz_A Non-structural protein 97.7 6.3E-05 2.2E-09 71.9 8.1 131 82-257 91-225 (321)
297 1g55_A DNA cytosine methyltran 97.6 5.4E-05 1.9E-09 74.3 6.5 80 87-179 3-82 (343)
298 2c7p_A Modification methylase 97.6 0.00012 4E-09 71.6 8.4 75 86-179 11-85 (327)
299 2zig_A TTHA0409, putative modi 97.2 0.00091 3.1E-08 64.0 8.2 48 84-134 234-281 (297)
300 2py6_A Methyltransferase FKBM; 97.0 0.0017 5.9E-08 65.1 8.9 64 82-145 223-291 (409)
301 3vyw_A MNMC2; tRNA wobble urid 96.9 0.0057 2E-07 59.0 11.6 130 87-264 98-246 (308)
302 2k4m_A TR8_protein, UPF0146 pr 96.9 0.0011 3.8E-08 57.1 5.7 64 84-174 34-99 (153)
303 4h0n_A DNMT2; SAH binding, tra 96.9 0.0014 4.9E-08 64.0 7.2 77 88-178 5-82 (333)
304 2qrv_A DNA (cytosine-5)-methyl 96.9 0.0025 8.5E-08 61.2 8.8 82 84-178 14-96 (295)
305 3qv2_A 5-cytosine DNA methyltr 96.8 0.0013 4.5E-08 64.1 6.3 77 87-178 11-89 (327)
306 1i4w_A Mitochondrial replicati 96.8 0.0019 6.4E-08 63.7 7.2 80 65-148 31-117 (353)
307 1g60_A Adenine-specific methyl 96.7 0.0017 5.9E-08 60.8 6.0 49 84-135 211-259 (260)
308 3ubt_Y Modification methylase 96.6 0.0033 1.1E-07 60.5 7.2 73 88-178 2-74 (331)
309 1pl8_A Human sorbitol dehydrog 96.0 0.021 7.3E-07 55.5 9.4 53 80-137 166-219 (356)
310 2zig_A TTHA0409, putative modi 96.0 0.0065 2.2E-07 58.0 5.4 79 136-237 20-98 (297)
311 3me5_A Cytosine-specific methy 95.8 0.011 3.7E-07 60.6 6.1 89 87-179 89-183 (482)
312 1f8f_A Benzyl alcohol dehydrog 95.7 0.018 6.1E-07 56.3 7.3 53 80-137 185-238 (371)
313 3s2e_A Zinc-containing alcohol 95.6 0.022 7.4E-07 55.0 7.4 51 81-137 162-213 (340)
314 1boo_A Protein (N-4 cytosine-s 95.6 0.029 1E-06 54.2 8.1 72 137-237 14-85 (323)
315 3jv7_A ADH-A; dehydrogenase, n 95.5 0.031 1.1E-06 53.9 8.2 51 82-137 168-219 (345)
316 2dph_A Formaldehyde dismutase; 95.5 0.011 3.9E-07 58.4 5.0 50 81-135 181-231 (398)
317 1e3j_A NADP(H)-dependent ketos 95.3 0.068 2.3E-06 51.7 9.8 52 80-137 163-215 (352)
318 3b5i_A S-adenosyl-L-methionine 95.3 0.028 9.5E-07 55.7 7.1 46 86-131 53-112 (374)
319 1p0f_A NADP-dependent alcohol 95.2 0.047 1.6E-06 53.3 8.5 53 80-137 186-239 (373)
320 4ej6_A Putative zinc-binding d 95.2 0.03 1E-06 54.8 7.1 54 79-137 176-230 (370)
321 3pvc_A TRNA 5-methylaminomethy 95.2 0.038 1.3E-06 58.7 8.3 133 85-262 58-229 (689)
322 1e3i_A Alcohol dehydrogenase, 95.0 0.058 2E-06 52.7 8.4 53 80-137 190-243 (376)
323 1cdo_A Alcohol dehydrogenase; 95.0 0.063 2.1E-06 52.4 8.6 53 80-137 187-240 (374)
324 3two_A Mannitol dehydrogenase; 94.9 0.042 1.4E-06 53.1 7.1 52 81-138 172-224 (348)
325 3fpc_A NADP-dependent alcohol 94.9 0.078 2.7E-06 51.3 8.9 54 79-137 160-214 (352)
326 3uko_A Alcohol dehydrogenase c 94.9 0.09 3.1E-06 51.4 9.4 53 80-137 188-241 (378)
327 2fzw_A Alcohol dehydrogenase c 94.9 0.068 2.3E-06 52.1 8.5 53 80-137 185-238 (373)
328 2jhf_A Alcohol dehydrogenase E 94.9 0.069 2.4E-06 52.1 8.4 53 80-137 186-239 (374)
329 4fs3_A Enoyl-[acyl-carrier-pro 94.8 0.26 9E-06 45.4 12.0 89 85-175 5-96 (256)
330 4dvj_A Putative zinc-dependent 94.6 0.053 1.8E-06 52.9 6.9 48 85-137 171-220 (363)
331 1m6e_X S-adenosyl-L-methionnin 94.5 0.04 1.4E-06 54.2 5.7 77 87-171 53-145 (359)
332 3m6i_A L-arabinitol 4-dehydrog 94.4 0.27 9.1E-06 47.6 11.4 49 80-129 174-223 (363)
333 1wma_A Carbonyl reductase [NAD 94.2 0.44 1.5E-05 43.3 11.9 86 85-174 3-91 (276)
334 1g60_A Adenine-specific methyl 94.2 0.018 6.3E-07 53.7 2.4 72 138-238 5-76 (260)
335 1uuf_A YAHK, zinc-type alcohol 94.2 0.094 3.2E-06 51.3 7.6 50 82-137 191-241 (369)
336 4dkj_A Cytosine-specific methy 94.2 0.24 8.1E-06 49.5 10.5 45 87-131 11-59 (403)
337 2h6e_A ADH-4, D-arabinose 1-de 93.9 0.074 2.5E-06 51.3 6.1 51 82-137 168-219 (344)
338 2efj_A 3,7-dimethylxanthine me 93.8 0.6 2E-05 46.3 12.6 78 86-171 53-155 (384)
339 3uog_A Alcohol dehydrogenase; 93.6 0.18 6.3E-06 48.9 8.5 52 80-137 184-236 (363)
340 1eg2_A Modification methylase 93.6 0.073 2.5E-06 51.4 5.5 49 83-134 240-291 (319)
341 1boo_A Protein (N-4 cytosine-s 93.5 0.053 1.8E-06 52.3 4.3 50 83-135 250-299 (323)
342 4a2c_A Galactitol-1-phosphate 93.5 0.85 2.9E-05 43.5 12.9 53 80-137 155-208 (346)
343 4eez_A Alcohol dehydrogenase 1 93.5 0.19 6.6E-06 48.2 8.2 52 81-137 159-211 (348)
344 3tos_A CALS11; methyltransfera 93.5 0.19 6.6E-06 47.1 7.9 128 85-255 70-237 (257)
345 3swr_A DNA (cytosine-5)-methyl 93.4 0.18 6E-06 56.0 8.6 86 87-179 541-632 (1002)
346 1vj0_A Alcohol dehydrogenase, 93.3 0.11 3.8E-06 50.9 6.3 52 81-137 190-243 (380)
347 3oig_A Enoyl-[acyl-carrier-pro 93.3 1.1 3.8E-05 40.9 12.8 89 85-175 6-97 (266)
348 3ps9_A TRNA 5-methylaminomethy 93.2 0.19 6.5E-06 53.1 8.3 132 86-262 67-237 (676)
349 3gms_A Putative NADPH:quinone 93.1 0.36 1.2E-05 46.2 9.6 52 80-137 139-192 (340)
350 3o38_A Short chain dehydrogena 93.0 1 3.5E-05 41.2 12.1 88 85-175 21-111 (266)
351 3grk_A Enoyl-(acyl-carrier-pro 92.9 1.6 5.4E-05 40.9 13.6 87 84-174 29-118 (293)
352 3fbg_A Putative arginate lyase 92.8 0.15 5.2E-06 49.2 6.4 47 85-137 150-198 (346)
353 1rjw_A ADH-HT, alcohol dehydro 92.8 0.18 6.1E-06 48.5 6.8 49 82-136 161-210 (339)
354 1v3u_A Leukotriene B4 12- hydr 92.7 0.19 6.5E-06 48.0 6.9 50 81-136 141-192 (333)
355 3goh_A Alcohol dehydrogenase, 92.5 0.18 6.2E-06 47.8 6.4 51 80-137 137-188 (315)
356 1piw_A Hypothetical zinc-type 92.5 0.44 1.5E-05 46.1 9.3 51 81-137 175-226 (360)
357 1eg2_A Modification methylase 92.4 0.052 1.8E-06 52.5 2.5 67 138-236 39-106 (319)
358 1pqw_A Polyketide synthase; ro 92.3 0.58 2E-05 40.9 9.0 50 81-136 34-85 (198)
359 3pxx_A Carveol dehydrogenase; 92.0 3 0.0001 38.3 14.0 87 85-175 9-109 (287)
360 2j3h_A NADP-dependent oxidored 92.0 0.25 8.5E-06 47.4 6.7 52 80-136 150-203 (345)
361 4b7c_A Probable oxidoreductase 91.9 0.2 6.8E-06 47.9 5.9 52 80-136 144-197 (336)
362 2b5w_A Glucose dehydrogenase; 91.9 0.13 4.4E-06 49.9 4.6 52 81-137 162-225 (357)
363 3lf2_A Short chain oxidoreduct 91.8 2.7 9.2E-05 38.4 13.4 87 85-174 7-96 (265)
364 3d79_A PUA domain, putative un 91.8 0.11 3.6E-06 46.1 3.5 34 344-377 93-126 (179)
365 4ft4_B DNA (cytosine-5)-methyl 91.7 0.34 1.2E-05 52.1 8.2 44 87-130 213-260 (784)
366 1q7h_A Conserved hypothetical 91.7 0.11 3.9E-06 44.5 3.6 35 344-378 69-103 (153)
367 3rih_A Short chain dehydrogena 91.7 0.8 2.7E-05 43.1 9.8 87 85-174 40-128 (293)
368 2hcy_A Alcohol dehydrogenase 1 91.6 0.35 1.2E-05 46.5 7.3 50 81-136 165-216 (347)
369 4eso_A Putative oxidoreductase 91.6 1.5 5E-05 40.1 11.3 84 85-175 7-92 (255)
370 2c0c_A Zinc binding alcohol de 91.4 0.28 9.4E-06 47.7 6.3 51 81-137 159-211 (362)
371 4eye_A Probable oxidoreductase 91.3 0.22 7.4E-06 48.0 5.5 52 80-137 154-207 (342)
372 3h7a_A Short chain dehydrogena 91.3 1.5 5E-05 40.1 10.9 86 85-175 6-93 (252)
373 2d8a_A PH0655, probable L-thre 91.2 0.94 3.2E-05 43.4 10.0 51 81-137 164-215 (348)
374 3ip1_A Alcohol dehydrogenase, 91.2 1 3.6E-05 44.2 10.5 51 82-137 210-261 (404)
375 3tjr_A Short chain dehydrogena 91.2 1.9 6.5E-05 40.4 11.9 87 84-174 29-117 (301)
376 3av4_A DNA (cytosine-5)-methyl 91.1 0.45 1.5E-05 54.3 8.4 87 86-179 851-943 (1330)
377 3k31_A Enoyl-(acyl-carrier-pro 91.0 2.3 7.8E-05 39.8 12.2 86 85-174 29-117 (296)
378 3jyn_A Quinone oxidoreductase; 91.0 0.85 2.9E-05 43.3 9.3 50 81-136 136-187 (325)
379 3pk0_A Short-chain dehydrogena 90.8 2.3 7.8E-05 38.9 11.8 87 85-174 9-97 (262)
380 3ucx_A Short chain dehydrogena 90.7 3.7 0.00013 37.5 13.1 85 85-173 10-96 (264)
381 1jvb_A NAD(H)-dependent alcoho 90.6 0.31 1E-05 46.9 5.8 51 81-136 166-218 (347)
382 3rkr_A Short chain oxidoreduct 90.6 3.5 0.00012 37.5 12.9 86 85-174 28-115 (262)
383 3r90_A Malignant T cell-amplif 90.1 0.16 5.5E-06 45.3 3.0 30 345-374 92-121 (188)
384 2eih_A Alcohol dehydrogenase; 90.0 1 3.4E-05 43.2 8.9 51 81-137 162-214 (343)
385 3is3_A 17BETA-hydroxysteroid d 89.9 3.4 0.00012 37.9 12.2 86 85-174 17-105 (270)
386 1ja9_A 4HNR, 1,3,6,8-tetrahydr 89.9 2.1 7.3E-05 38.8 10.7 86 85-174 20-108 (274)
387 3v2g_A 3-oxoacyl-[acyl-carrier 89.8 4.5 0.00015 37.2 13.0 86 85-174 30-118 (271)
388 3lyl_A 3-oxoacyl-(acyl-carrier 89.7 4.3 0.00015 36.4 12.5 85 86-174 5-91 (247)
389 4egf_A L-xylulose reductase; s 89.7 2.6 8.8E-05 38.7 11.2 87 85-175 19-108 (266)
390 3svt_A Short-chain type dehydr 89.7 4.2 0.00014 37.4 12.7 87 85-174 10-100 (281)
391 4dry_A 3-oxoacyl-[acyl-carrier 89.6 2.7 9.3E-05 39.0 11.3 87 85-174 32-120 (281)
392 1yb1_A 17-beta-hydroxysteroid 89.5 5 0.00017 36.7 13.1 86 85-174 30-117 (272)
393 3gaf_A 7-alpha-hydroxysteroid 89.3 2.9 0.0001 38.0 11.1 86 85-174 11-98 (256)
394 2ae2_A Protein (tropinone redu 89.2 4.5 0.00015 36.7 12.4 87 85-174 8-96 (260)
395 3ioy_A Short-chain dehydrogena 89.2 4.2 0.00014 38.4 12.6 87 85-174 7-96 (319)
396 2jah_A Clavulanic acid dehydro 89.1 4.9 0.00017 36.2 12.5 85 86-174 7-93 (247)
397 4imr_A 3-oxoacyl-(acyl-carrier 89.1 2.5 8.6E-05 39.1 10.6 85 85-174 32-118 (275)
398 3tfo_A Putative 3-oxoacyl-(acy 88.9 3.9 0.00013 37.6 11.8 85 86-174 4-90 (264)
399 3r3s_A Oxidoreductase; structu 88.8 4.5 0.00015 37.7 12.3 86 85-174 48-137 (294)
400 1ae1_A Tropinone reductase-I; 88.8 5.6 0.00019 36.4 12.8 87 85-174 20-108 (273)
401 3r1i_A Short-chain type dehydr 88.7 2.7 9.2E-05 38.9 10.6 86 85-174 31-118 (276)
402 3tsc_A Putative oxidoreductase 88.7 5.4 0.00019 36.5 12.7 86 85-174 10-110 (277)
403 3trk_A Nonstructural polyprote 88.7 0.58 2E-05 43.9 5.6 70 164-256 210-279 (324)
404 3qwb_A Probable quinone oxidor 88.6 1.6 5.3E-05 41.6 9.0 50 81-136 144-195 (334)
405 4dcm_A Ribosomal RNA large sub 88.6 0.95 3.3E-05 44.4 7.6 70 85-174 38-109 (375)
406 1xu9_A Corticosteroid 11-beta- 88.5 4.1 0.00014 37.5 11.7 84 86-172 28-113 (286)
407 3pgx_A Carveol dehydrogenase; 88.5 4.1 0.00014 37.4 11.7 86 85-174 14-114 (280)
408 3nx4_A Putative oxidoreductase 88.4 0.55 1.9E-05 44.5 5.7 45 86-137 148-194 (324)
409 4fc7_A Peroxisomal 2,4-dienoyl 88.4 5.2 0.00018 36.7 12.4 87 85-174 26-114 (277)
410 1yb5_A Quinone oxidoreductase; 88.3 2.3 7.8E-05 40.9 10.0 50 81-136 166-217 (351)
411 3ftp_A 3-oxoacyl-[acyl-carrier 88.2 4.1 0.00014 37.5 11.4 86 85-174 27-114 (270)
412 1w6u_A 2,4-dienoyl-COA reducta 88.2 6.1 0.00021 36.4 12.7 86 85-174 25-113 (302)
413 3i1j_A Oxidoreductase, short c 88.1 6.3 0.00021 35.2 12.4 90 85-175 13-104 (247)
414 3f1l_A Uncharacterized oxidore 88.0 6.1 0.00021 35.7 12.3 87 85-174 11-101 (252)
415 1geg_A Acetoin reductase; SDR 88.0 5.5 0.00019 36.0 12.0 85 86-174 2-88 (256)
416 3t4x_A Oxidoreductase, short c 87.9 6 0.00021 36.1 12.4 84 85-174 9-94 (267)
417 1xhl_A Short-chain dehydrogena 87.8 5.4 0.00018 37.2 12.2 87 85-174 25-115 (297)
418 3v8b_A Putative dehydrogenase, 87.8 4.2 0.00014 37.7 11.3 87 85-175 27-115 (283)
419 3f9i_A 3-oxoacyl-[acyl-carrier 87.7 4.7 0.00016 36.1 11.4 82 84-175 12-94 (249)
420 3ijr_A Oxidoreductase, short c 87.7 10 0.00035 35.1 14.0 86 85-174 46-134 (291)
421 1gee_A Glucose 1-dehydrogenase 87.6 5.3 0.00018 35.9 11.6 85 86-174 7-94 (261)
422 3ksu_A 3-oxoacyl-acyl carrier 87.5 7 0.00024 35.6 12.5 86 85-174 10-100 (262)
423 1wly_A CAAR, 2-haloacrylate re 87.5 2.8 9.7E-05 39.7 10.1 50 81-136 141-192 (333)
424 3nyw_A Putative oxidoreductase 87.5 4.6 0.00016 36.6 11.2 87 85-174 6-96 (250)
425 3l77_A Short-chain alcohol deh 87.5 7.5 0.00026 34.4 12.5 85 86-174 2-89 (235)
426 3awd_A GOX2181, putative polyo 87.4 8.1 0.00028 34.6 12.8 86 85-174 12-99 (260)
427 3krt_A Crotonyl COA reductase; 87.4 0.55 1.9E-05 47.1 5.2 51 81-137 224-276 (456)
428 3imf_A Short chain dehydrogena 87.3 4.7 0.00016 36.6 11.2 85 86-174 6-92 (257)
429 4ibo_A Gluconate dehydrogenase 87.2 3.8 0.00013 37.7 10.6 86 85-174 25-112 (271)
430 4g81_D Putative hexonate dehyd 87.2 4.4 0.00015 37.5 10.9 86 85-174 8-95 (255)
431 4fgs_A Probable dehydrogenase 87.2 5.8 0.0002 37.1 11.9 83 85-174 28-112 (273)
432 4dup_A Quinone oxidoreductase; 87.2 0.56 1.9E-05 45.3 4.9 51 81-137 163-215 (353)
433 3t7c_A Carveol dehydrogenase; 87.1 8.3 0.00028 35.8 13.0 86 85-174 27-126 (299)
434 3rku_A Oxidoreductase YMR226C; 87.1 7.2 0.00025 36.2 12.5 87 85-174 32-124 (287)
435 1g0o_A Trihydroxynaphthalene r 87.1 6.3 0.00022 36.2 12.0 86 85-174 28-116 (283)
436 3u5t_A 3-oxoacyl-[acyl-carrier 87.1 4.9 0.00017 36.9 11.2 86 85-174 26-114 (267)
437 1xkq_A Short-chain reductase f 87.1 4.9 0.00017 36.9 11.2 87 85-174 5-95 (280)
438 3edm_A Short chain dehydrogena 87.0 5.1 0.00017 36.5 11.2 85 85-173 7-94 (259)
439 1qor_A Quinone oxidoreductase; 86.9 2.2 7.6E-05 40.3 9.0 51 80-136 135-187 (327)
440 1kol_A Formaldehyde dehydrogen 86.9 1.1 3.8E-05 43.8 7.0 50 81-135 181-231 (398)
441 3cxt_A Dehydrogenase with diff 86.9 6.6 0.00023 36.5 12.2 86 85-174 33-120 (291)
442 1iz0_A Quinone oxidoreductase; 86.9 0.33 1.1E-05 45.7 3.0 49 83-137 123-173 (302)
443 1fmc_A 7 alpha-hydroxysteroid 86.8 8.2 0.00028 34.4 12.4 86 85-174 10-97 (255)
444 2pd4_A Enoyl-[acyl-carrier-pro 86.8 5.5 0.00019 36.5 11.4 86 85-174 5-93 (275)
445 1gu7_A Enoyl-[acyl-carrier-pro 86.7 1.3 4.6E-05 42.5 7.4 54 82-137 163-219 (364)
446 3oec_A Carveol dehydrogenase ( 86.7 7 0.00024 36.8 12.3 87 85-175 45-145 (317)
447 3s55_A Putative short-chain de 86.6 8.9 0.00031 35.1 12.8 87 85-175 9-109 (281)
448 3sju_A Keto reductase; short-c 86.6 5.3 0.00018 36.8 11.3 86 86-175 24-111 (279)
449 3uve_A Carveol dehydrogenase ( 86.6 5.9 0.0002 36.4 11.6 86 85-174 10-113 (286)
450 3oid_A Enoyl-[acyl-carrier-pro 86.4 6.5 0.00022 35.7 11.6 86 85-174 3-91 (258)
451 2rhc_B Actinorhodin polyketide 86.3 9.5 0.00032 35.0 12.8 86 85-174 21-108 (277)
452 1yxm_A Pecra, peroxisomal tran 86.3 11 0.00036 34.8 13.2 87 85-174 17-109 (303)
453 4da9_A Short-chain dehydrogena 86.2 8.6 0.00029 35.4 12.4 87 84-174 27-116 (280)
454 2cdc_A Glucose dehydrogenase g 86.1 1.5 5.3E-05 42.3 7.4 46 86-137 181-230 (366)
455 3e9n_A Putative short-chain de 86.0 3.2 0.00011 37.3 9.1 80 86-174 5-84 (245)
456 3sc4_A Short chain dehydrogena 85.9 10 0.00035 35.0 12.8 86 85-174 8-102 (285)
457 3v2h_A D-beta-hydroxybutyrate 85.9 5.3 0.00018 36.9 10.8 87 86-175 25-114 (281)
458 1xa0_A Putative NADPH dependen 85.8 0.38 1.3E-05 45.7 2.9 50 82-137 145-197 (328)
459 4e6p_A Probable sorbitol dehyd 85.8 7.9 0.00027 35.0 11.8 84 85-175 7-92 (259)
460 4a27_A Synaptic vesicle membra 85.8 0.57 1.9E-05 45.1 4.1 50 81-137 138-189 (349)
461 3qiv_A Short-chain dehydrogena 85.8 8.3 0.00028 34.5 11.9 86 85-174 8-95 (253)
462 1xq1_A Putative tropinone redu 85.6 8.2 0.00028 34.8 11.8 87 85-174 13-101 (266)
463 2j8z_A Quinone oxidoreductase; 85.5 3.1 0.00011 39.9 9.3 50 81-136 158-209 (354)
464 1xg5_A ARPG836; short chain de 85.4 9.7 0.00033 34.7 12.4 87 85-174 31-120 (279)
465 3gvc_A Oxidoreductase, probabl 85.4 9 0.00031 35.3 12.2 83 85-174 28-112 (277)
466 2wyu_A Enoyl-[acyl carrier pro 85.2 5.3 0.00018 36.2 10.4 86 85-174 7-95 (261)
467 1tt7_A YHFP; alcohol dehydroge 85.2 0.63 2.1E-05 44.2 4.1 50 82-137 146-198 (330)
468 3gaz_A Alcohol dehydrogenase s 85.2 0.9 3.1E-05 43.6 5.2 50 80-136 145-196 (343)
469 2a4k_A 3-oxoacyl-[acyl carrier 85.2 4.8 0.00017 36.8 10.1 83 85-174 5-89 (263)
470 2pd6_A Estradiol 17-beta-dehyd 85.1 4 0.00014 36.7 9.4 62 86-148 7-75 (264)
471 2b4q_A Rhamnolipids biosynthes 85.0 4.3 0.00015 37.4 9.7 85 85-174 28-114 (276)
472 1zem_A Xylitol dehydrogenase; 85.0 7.5 0.00026 35.2 11.3 86 85-174 6-93 (262)
473 2p91_A Enoyl-[acyl-carrier-pro 85.0 9.9 0.00034 34.9 12.3 86 85-174 20-108 (285)
474 3ai3_A NADPH-sorbose reductase 84.9 11 0.00036 34.1 12.2 85 86-174 7-94 (263)
475 1vl8_A Gluconate 5-dehydrogena 84.9 11 0.00036 34.5 12.3 86 85-174 20-108 (267)
476 3ek2_A Enoyl-(acyl-carrier-pro 84.9 6.4 0.00022 35.5 10.7 87 84-174 12-101 (271)
477 2hwk_A Helicase NSP2; rossman 84.8 0.83 2.8E-05 43.4 4.5 34 222-255 240-273 (320)
478 4dmm_A 3-oxoacyl-[acyl-carrier 84.8 10 0.00034 34.7 12.1 87 85-175 27-116 (269)
479 2c07_A 3-oxoacyl-(acyl-carrier 84.7 13 0.00045 34.0 13.0 85 86-174 44-130 (285)
480 3sx2_A Putative 3-ketoacyl-(ac 84.7 8.6 0.0003 35.1 11.6 86 85-174 12-111 (278)
481 2bd0_A Sepiapterin reductase; 84.6 7.8 0.00027 34.4 11.0 85 86-174 2-95 (244)
482 2zb4_A Prostaglandin reductase 84.4 1 3.4E-05 43.4 5.2 52 80-136 153-209 (357)
483 2h7i_A Enoyl-[acyl-carrier-pro 84.4 4 0.00014 37.3 9.2 86 85-174 6-96 (269)
484 3osu_A 3-oxoacyl-[acyl-carrier 84.3 11 0.00039 33.6 12.1 86 86-175 4-92 (246)
485 4a0s_A Octenoyl-COA reductase/ 84.1 1.6 5.6E-05 43.3 6.8 51 81-137 216-268 (447)
486 3l6e_A Oxidoreductase, short-c 83.6 9.6 0.00033 34.0 11.2 82 86-174 3-86 (235)
487 3tqh_A Quinone oxidoreductase; 83.5 3.3 0.00011 39.0 8.4 51 80-137 147-199 (321)
488 2pnf_A 3-oxoacyl-[acyl-carrier 83.5 11 0.00037 33.4 11.5 85 86-174 7-94 (248)
489 4iin_A 3-ketoacyl-acyl carrier 83.4 8.1 0.00028 35.2 10.8 86 85-174 28-116 (271)
490 3zv0_C H/ACA ribonucleoprotein 83.3 0.75 2.6E-05 41.1 3.4 36 342-377 72-107 (195)
491 3tox_A Short chain dehydrogena 83.0 4.3 0.00015 37.6 8.8 86 85-174 7-94 (280)
492 1edo_A Beta-keto acyl carrier 83.0 13 0.00046 32.7 11.9 84 87-174 2-88 (244)
493 1zsy_A Mitochondrial 2-enoyl t 83.0 3.7 0.00013 39.4 8.5 55 81-137 163-219 (357)
494 3icc_A Putative 3-oxoacyl-(acy 82.9 11 0.00039 33.5 11.4 62 85-148 6-69 (255)
495 1mxh_A Pteridine reductase 2; 82.8 18 0.00061 32.8 12.9 86 86-175 11-104 (276)
496 3dmg_A Probable ribosomal RNA 82.6 2.7 9.1E-05 41.3 7.5 121 69-253 30-150 (381)
497 4dqx_A Probable oxidoreductase 82.5 15 0.0005 33.8 12.2 83 85-174 26-110 (277)
498 4e3z_A Putative oxidoreductase 82.5 13 0.00046 33.7 11.9 86 85-174 25-113 (272)
499 1sny_A Sniffer CG10964-PA; alp 82.4 7.8 0.00027 34.9 10.2 86 86-174 21-111 (267)
500 2yut_A Putative short-chain ox 82.2 11 0.00039 32.2 10.8 73 88-174 2-75 (207)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=3.9e-46 Score=371.08 Aligned_cols=229 Identities=25% Similarity=0.358 Sum_probs=182.3
Q ss_pred cccccCCCcc---cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q psy17793 52 NVLSQVPNVA---LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEE 128 (397)
Q Consensus 52 ~~~~~~p~~~---~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~ 128 (397)
+.+.++|.+. +.-+.|++||++|++++.+|++++|++||||||||||||+|+|+++ +.+.|+|+|+++.|++.+++
T Consensus 112 g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~ 190 (359)
T 4fzv_A 112 GDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQK 190 (359)
T ss_dssp TCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHH
T ss_pred CChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHH
Confidence 4456677764 4446689999999999999999999999999999999999999976 56789999999999999999
Q ss_pred HHHHhCCC------cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCC-----CCcccccccCccchHHHH
Q psy17793 129 TIKKLQLS------SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFG-----QRPMFYNANSFLNLDKKI 197 (397)
Q Consensus 129 n~~~~g~~------~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G-----~~p~~~~~~s~~~~~~~~ 197 (397)
|++++|.. ++.+...|++.+. ....+.||+||+||||||+| .+|+..+.++ ...+
T Consensus 191 ~l~r~~~~~~~~~~~v~v~~~D~~~~~----------~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~----~~~~ 256 (359)
T 4fzv_A 191 ILHSYVPEEIRDGNQVRVTSWDGRKWG----------ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSR----KKER 256 (359)
T ss_dssp HHHHHSCTTTTTSSSEEEECCCGGGHH----------HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGG----HHHH
T ss_pred HHHHhhhhhhccCCceEEEeCchhhcc----------hhccccCCEEEECCccCCCCCcccccChhhhhhCC----HHHH
Confidence 99999863 6899999998763 23457899999999999984 3677788888 7999
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcc----cCCCCCc
Q psy17793 198 KSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQ----LGMKGLA 273 (397)
Q Consensus 198 ~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~----~~~~g~~ 273 (397)
..++.+|++||.+ |+++|||||+|||||||++++|||+||+++|++++++..+++... +......
T Consensus 257 ~~l~~lQ~~iL~~-----------a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (359)
T 4fzv_A 257 QILPVLQVQLLAA-----------GLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMD 325 (359)
T ss_dssp HTHHHHHHHHHHH-----------HHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-----------HHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCccccccccccccccccccc
Confidence 9999999999999 999999999999999999999999999999999876544332211 0000000
Q ss_pred cCCCchhhhcceEEeCCCCCCCCCCCCCCcEEEEeeecc
Q psy17793 274 HKDLEAEDQAVMQRFGPPLIPTDRNTDTIGFFICKLRKK 312 (397)
Q Consensus 274 ~~~~~~~~~~~~~r~~P~~~t~~~~~~t~GFFiA~l~K~ 312 (397)
...+ ....+...|+.|+. ..+++|||+|+|+|.
T Consensus 326 ~~~~-~~~~~~g~r~~P~~-----~~~~gGFFiA~L~Kv 358 (359)
T 4fzv_A 326 TFCF-FSSCQVGELVIPNL-----MANFGPMYFCKMRRL 358 (359)
T ss_dssp TCEE-CTTCSSSEEEECBT-----TBCCCCEEEEEEEEC
T ss_pred cccc-CccccceEEECCCC-----CCCCCCEEEEEEEEC
Confidence 0000 11223456788852 346788999999985
No 2
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.8e-43 Score=346.14 Aligned_cols=219 Identities=30% Similarity=0.446 Sum_probs=177.6
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+++|++++||++|++++.+|++++|++|||+|||||+||+++|+++++.++|+|+|+++.+++.+++|++++|+.+|+++
T Consensus 79 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~ 158 (309)
T 2b9e_A 79 YRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELA 158 (309)
T ss_dssp HHTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 68999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---Cccccccc--CccchHHHHHHHHHHHHHHHHHHhhhhc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNAN--SFLNLDKKIKSYANIQKKLLQAVYRFVS 216 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~--s~~~~~~~~~~l~~~Q~~lL~~~~~f~~ 216 (397)
.+|+..+... .. ...+||+|++||||||+|. +|+..+.+ + .+++..++.+|+++|++
T Consensus 159 ~~D~~~~~~~------~~--~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~----~~~~~~l~~~Q~~iL~~------ 220 (309)
T 2b9e_A 159 EEDFLAVSPS------DP--RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPS----PVRLHALAGFQQRALCH------ 220 (309)
T ss_dssp ECCGGGSCTT------CG--GGTTEEEEEECCCCCC----------------------CCHHHHHHHHHHHHHH------
T ss_pred eCChHhcCcc------cc--ccCCCCEEEEcCCcCCCCCCccCCChhhhccCC----HHHHHHHHHHHHHHHHH------
Confidence 9999876311 00 1147999999999999994 46665533 4 46788899999999999
Q ss_pred cccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCC-cEEEecCcccCCCCCccCCCchhhhcceEEeCCCCCCC
Q psy17793 217 LFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPE-VELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPT 295 (397)
Q Consensus 217 ~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~-~~l~~~~~~~~~~g~~~~~~~~~~~~~~~r~~P~~~t~ 295 (397)
|+++|+ ||+|||||||++++|||++|.++|+++++ ++++++.+.|+..+... +. ....++|++|+
T Consensus 221 -----a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~r~~P~---- 286 (309)
T 2b9e_A 221 -----ALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLST--FP--GAEHCLRASPE---- 286 (309)
T ss_dssp -----HTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCCTTCCCBCCSS--ST--TGGGSEEECHH----
T ss_pred -----HHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEeccccccccccccc--cC--CCCCeEEECCC----
Confidence 999987 99999999999999999999999999998 99988766554333321 11 12457889885
Q ss_pred CCCCCCCcEEEEeeecccC
Q psy17793 296 DRNTDTIGFFICKLRKKYG 314 (397)
Q Consensus 296 ~~~~~t~GFFiA~l~K~~~ 314 (397)
.++|+|||+|+|+|...
T Consensus 287 --~~~~dGfF~A~l~k~~~ 303 (309)
T 2b9e_A 287 --TTLSSGFFVAVIERVEV 303 (309)
T ss_dssp --HHSSCSEEEEEEEEC--
T ss_pred --CCCCCCeEEEEEEECCC
Confidence 57899999999999753
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1e-42 Score=357.13 Aligned_cols=221 Identities=31% Similarity=0.453 Sum_probs=191.2
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+.+|++++||++|++++.++++++|++|||+|||||++|+++|+++++.++|+|+|+|+.+++.+++|++++|+. |.++
T Consensus 78 ~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~ 156 (464)
T 3m6w_A 78 FYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVT 156 (464)
T ss_dssp HHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEE
T ss_pred HhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEE
Confidence 789999999999999999999999999999999999999999999987899999999999999999999999998 9999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
++|+..+. .+..+.||+|++||||||+|. +|+..+.|+ .+.+..++.+|+++|++
T Consensus 157 ~~Da~~l~----------~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~----~~~~~~l~~~Q~~iL~~-------- 214 (464)
T 3m6w_A 157 QAPPRALA----------EAFGTYFHRVLLDAPCSGEGMFRKDREAARHWG----PSAPKRMAEVQKALLAQ-------- 214 (464)
T ss_dssp CSCHHHHH----------HHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCC----TTHHHHHHHHHHHHHHH--------
T ss_pred ECCHHHhh----------hhccccCCEEEECCCcCCccccccChHHhhhcC----HHHHHHHHHHHHHHHHH--------
Confidence 99987752 123568999999999999993 688888888 78999999999999999
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCC-CCCccCCCchhhhcceEEeCCCCCCCCC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGM-KGLAHKDLEAEDQAVMQRFGPPLIPTDR 297 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~-~g~~~~~~~~~~~~~~~r~~P~~~t~~~ 297 (397)
+.++|||||+|||||||++++|||++|+++|+++++++++++....+. ++.+...........+.|++|+
T Consensus 215 ---a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~------ 285 (464)
T 3m6w_A 215 ---ASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPH------ 285 (464)
T ss_dssp ---HHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTT------
T ss_pred ---HHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEEecccccccccCcccccccccccCCeEEECCC------
Confidence 999999999999999999999999999999999999999988643221 1211111111123457899995
Q ss_pred CCCCCcEEEEeeecccC
Q psy17793 298 NTDTIGFFICKLRKKYG 314 (397)
Q Consensus 298 ~~~t~GFFiA~l~K~~~ 314 (397)
.++|+|||+|+|+|..+
T Consensus 286 ~~~~dGfF~A~l~k~~~ 302 (464)
T 3m6w_A 286 RLEGEGHFLARFRKEGG 302 (464)
T ss_dssp TSSSSCEEEEEEEECSC
T ss_pred CCCceeEEEEEEEECCC
Confidence 67999999999999854
No 4
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=7.4e-43 Score=357.63 Aligned_cols=220 Identities=28% Similarity=0.440 Sum_probs=190.0
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+.+|++++||++|++++.+|++++|++|||+|||||+||+++|+++++.++|+|+|+|+.+++.+++|++++|+.||.++
T Consensus 82 ~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~ 161 (456)
T 3m4x_A 82 HQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVT 161 (456)
T ss_dssp HHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Confidence 78999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCC---CCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFG---QRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G---~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
+.|+..+. ....+.||+|++||||||+| .+|+..+.|+ ...+..++.+|+++|.+
T Consensus 162 ~~Da~~l~----------~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~----~~~~~~l~~~Q~~iL~~-------- 219 (456)
T 3m4x_A 162 NHAPAELV----------PHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWT----EESPLYCQKRQQEILSS-------- 219 (456)
T ss_dssp CCCHHHHH----------HHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCC----TTHHHHHHHHHHHHHHH--------
T ss_pred eCCHHHhh----------hhccccCCEEEECCCCCCccccccCHHHhhhcC----HHHHHHHHHHHHHHHHH--------
Confidence 99987762 12346899999999999999 3788888888 78999999999999999
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCC-CCCccCCCchhhhcceEEeCCCCCCCCC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGM-KGLAHKDLEAEDQAVMQRFGPPLIPTDR 297 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~-~g~~~~~~~~~~~~~~~r~~P~~~t~~~ 297 (397)
+.++|||||+|||||||++++|||++|+++|++++ ++++++....+. .+.+..... .....+.|++|+
T Consensus 220 ---a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~P~------ 288 (456)
T 3m4x_A 220 ---AIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP-VTIEEIPLTQSVSSGRSEWGSV-AGLEKTIRIWPH------ 288 (456)
T ss_dssp ---HHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS-EEEECCCCSSCCEECCGGGSSS-TTGGGSEEECTT------
T ss_pred ---HHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC-CEEEeccccccccccccccccc-cccCCeEEECCC------
Confidence 99999999999999999999999999999999998 999987643221 111111100 022457889895
Q ss_pred CCCCCcEEEEeeecccC
Q psy17793 298 NTDTIGFFICKLRKKYG 314 (397)
Q Consensus 298 ~~~t~GFFiA~l~K~~~ 314 (397)
.++|+|||+|+|+|..+
T Consensus 289 ~~~~dGFF~A~l~k~~~ 305 (456)
T 3m4x_A 289 KDQGEGHFVAKLTFHGQ 305 (456)
T ss_dssp TSSSSCEEEEEEEECSC
T ss_pred CCCCcCeEEEEEEECCC
Confidence 67999999999999753
No 5
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=5e-40 Score=339.21 Aligned_cols=216 Identities=33% Similarity=0.475 Sum_probs=186.0
Q ss_pred cCCCcEEEechhHHHHHhccCCC--CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQ--PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQ 139 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~--~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~ 139 (397)
+.+|.+++||++|++++.+|+++ +|++|||+|||||+||+++|+++++.+.|+|+|+|+.|++.+++|++++|+.+|+
T Consensus 92 ~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~ 171 (479)
T 2frx_A 92 HLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVA 171 (479)
T ss_dssp HHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEE
T ss_pred HhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEE
Confidence 78999999999999999999998 9999999999999999999999877899999999999999999999999999999
Q ss_pred EEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhc
Q psy17793 140 THVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVS 216 (397)
Q Consensus 140 ~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~ 216 (397)
++++|+..+. ....+.||+|++||||||+|. +|+..+.|+ .+.+..++.+|+++|.+
T Consensus 172 ~~~~D~~~~~----------~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~----~~~~~~l~~~q~~iL~~------ 231 (479)
T 2frx_A 172 LTHFDGRVFG----------AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWS----PESNQEIAATQRELIDS------ 231 (479)
T ss_dssp EECCCSTTHH----------HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCC----HHHHHHHHHHHHHHHHH------
T ss_pred EEeCCHHHhh----------hhccccCCEEEECCCcCCcccccCCHHHHhhcC----HhHHHHHHHHHHHHHHH------
Confidence 9999998762 113468999999999999994 688888898 79999999999999999
Q ss_pred cccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCc-EEEecCcccCCCCCccCCCchhhhcceEEeCCCCCCC
Q psy17793 217 LFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEV-ELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPT 295 (397)
Q Consensus 217 ~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~-~l~~~~~~~~~~g~~~~~~~~~~~~~~~r~~P~~~t~ 295 (397)
+.++|||||+|||||||++++|||++|+++|++++++ +++++...+. +... .+. ...+.|++|+
T Consensus 232 -----a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~--~~~~-~~~---~~g~~r~~P~---- 296 (479)
T 2frx_A 232 -----AFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFP--GANK-ALT---EEGFLHVFPQ---- 296 (479)
T ss_dssp -----HHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSST--TGGG-GBC---TTSCEEECTT----
T ss_pred -----HHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceeccccccccc--cccc-ccc---cCCeEEECCC----
Confidence 9999999999999999999999999999999999986 5555432221 1110 011 1245788885
Q ss_pred CCCCCCCcEEEEeeecccC
Q psy17793 296 DRNTDTIGFFICKLRKKYG 314 (397)
Q Consensus 296 ~~~~~t~GFFiA~l~K~~~ 314 (397)
.++++|||+|+|+|...
T Consensus 297 --~~~~dGfF~A~l~k~~~ 313 (479)
T 2frx_A 297 --IYDCEGFFVARLRKTQA 313 (479)
T ss_dssp --TTTSCCEEEEEEEECSC
T ss_pred --CCCcCccEEEEEEEcCC
Confidence 67899999999999753
No 6
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=1.6e-39 Score=318.63 Aligned_cols=215 Identities=36% Similarity=0.547 Sum_probs=180.9
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+..|++++||.+|++++.++++++|++|||+|||||++|+++|+.+++.++|+|+|+|+.+++.+++|++++|+.+++++
T Consensus 95 ~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~ 174 (315)
T 1ixk_A 95 FLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILF 174 (315)
T ss_dssp HHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred HhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 67999999999999999999999999999999999999999999987778999999999999999999999999999999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
++|+..+. ...++||+|++||||||+|. +|+..+.|+ ...+..+...|.++|++
T Consensus 175 ~~D~~~~~-----------~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~----~~~~~~~~~~q~~~L~~-------- 231 (315)
T 1ixk_A 175 HSSSLHIG-----------ELNVEFDKILLDAPCTGSGTIHKNPERKWNRT----MDDIKFCQGLQMRLLEK-------- 231 (315)
T ss_dssp SSCGGGGG-----------GGCCCEEEEEEECCTTSTTTCC--------CC----HHHHHHHHHHHHHHHHH--------
T ss_pred ECChhhcc-----------cccccCCEEEEeCCCCCcccccCChhHhhcCC----HHHHHHHHHHHHHHHHH--------
Confidence 99998763 12457999999999999994 688888888 79999999999999999
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCCCCCcc---CCCchhhhcceEEeCCCCCCC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAH---KDLEAEDQAVMQRFGPPLIPT 295 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~~g~~~---~~~~~~~~~~~~r~~P~~~t~ 295 (397)
+.++|||||+|+|+|||++++|||++|.++++++ +++++++. +..+|+.. ..+.. ....+.|++|+
T Consensus 232 ---~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~-~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~r~~P~---- 300 (315)
T 1ixk_A 232 ---GLEVLKPGGILVYSTCSLEPEENEFVIQWALDNF-DVELLPLK--YGEPALTNPFGIELSE-EIKNARRLYPD---- 300 (315)
T ss_dssp ---HHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHS-SEEEECCC--SSEECCSSGGGCCCCG-GGGGSEEECTT----
T ss_pred ---HHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcC-CCEEecCC--ccccCccccccccccc-ccCCEEEECCC----
Confidence 9999999999999999999999999999999997 58888775 22222221 11221 22457888885
Q ss_pred CCCCCCCcEEEEeeecc
Q psy17793 296 DRNTDTIGFFICKLRKK 312 (397)
Q Consensus 296 ~~~~~t~GFFiA~l~K~ 312 (397)
.++|+|||+|+|+|.
T Consensus 301 --~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 301 --VHETSGFFIAKIRKL 315 (315)
T ss_dssp --TSSSCSEEEEEEEEC
T ss_pred --CCCcccEEEEEEEEC
Confidence 679999999999984
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.5e-38 Score=326.08 Aligned_cols=211 Identities=35% Similarity=0.546 Sum_probs=185.9
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+..|++++||.+|++++.++++++|++|||+|||||++|++++..+++.++|+|+|+++.+++.+++|++++|+.++++.
T Consensus 236 ~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~ 315 (450)
T 2yxl_A 236 FNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPL 315 (450)
T ss_dssp HHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred hhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 67999999999999999999999999999999999999999999987668999999999999999999999999999999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
++|+...... +..+.||+|++||||||+|. +|+..+.++ ...+..+..+|.++|++
T Consensus 316 ~~D~~~~~~~---------~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~----~~~~~~l~~~q~~iL~~-------- 374 (450)
T 2yxl_A 316 VKDARKAPEI---------IGEEVADKVLLDAPCTSSGTIGKNPELRWRLR----EDKINEMSQLQRELLES-------- 374 (450)
T ss_dssp CSCTTCCSSS---------SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCC----TTSHHHHHHHHHHHHHH--------
T ss_pred EcChhhcchh---------hccCCCCEEEEcCCCCCCeeeccChhhhhhCC----HHHHHHHHHHHHHHHHH--------
Confidence 9999876311 33367999999999999993 788888888 68889999999999999
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCCCCCccCCCchhhhcceEEeCCCCCCCCCC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRN 298 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~r~~P~~~t~~~~ 298 (397)
+.++|||||+|+|+|||++++|||++|.++|+++++++++++.+.+ . .. ....+.|++|+ .
T Consensus 375 ---a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~-----~--~~---~~~~~~~~~P~------~ 435 (450)
T 2yxl_A 375 ---AARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY-----D--PG---FLEGTMRAWPH------R 435 (450)
T ss_dssp ---HHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSS-----E--EC---SSTTCEEECHH------H
T ss_pred ---HHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccccc-----c--cc---cCCCeEEECCC------C
Confidence 9999999999999999999999999999999999999998876432 1 01 11235778885 5
Q ss_pred CCCCcEEEEeeecc
Q psy17793 299 TDTIGFFICKLRKK 312 (397)
Q Consensus 299 ~~t~GFFiA~l~K~ 312 (397)
++++|||+|+|+|.
T Consensus 436 ~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 436 HSTIGFFYALLEKS 449 (450)
T ss_dssp HSSCCEEEEEEECC
T ss_pred CCCCceEEEEEEEC
Confidence 68999999999985
No 8
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=3.4e-37 Score=314.05 Aligned_cols=204 Identities=33% Similarity=0.503 Sum_probs=178.3
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+..|.+++||.+|++++.++++++|++|||+|||||++|+++++.+++ ++|+|+|+++.+++.+++|++++|+. ++++
T Consensus 223 ~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~ 300 (429)
T 1sqg_A 223 FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVK 300 (429)
T ss_dssp GGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEE
T ss_pred HhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEE
Confidence 579999999999999999999999999999999999999999998754 89999999999999999999999984 7889
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCC---CCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFG---QRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G---~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
..|+.... ..+..+.||+|++||||||+| .+|+..+.++ ...+..+..+|.++|++
T Consensus 301 ~~D~~~~~---------~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~----~~~~~~l~~~q~~~L~~-------- 359 (429)
T 1sqg_A 301 QGDGRYPS---------QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR----DRDIPELAQLQSEILDA-------- 359 (429)
T ss_dssp ECCTTCTH---------HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCC----TTHHHHHHHHHHHHHHH--------
T ss_pred eCchhhch---------hhcccCCCCEEEEeCCCCcccccCCCcchhhcCC----HHHHHHHHHHHHHHHHH--------
Confidence 99988752 113346899999999999999 3788888888 68899999999999999
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCCCCCccCCCchhhhcceEEeCCCCCCCCCC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRN 298 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~r~~P~~~t~~~~ 298 (397)
+.++|||||+|+|+|||++++|||++|.+++++++++++++ + +.. .....+++|+ .
T Consensus 360 ---a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~--~-----~~~--------~~~~~~~~P~------~ 415 (429)
T 1sqg_A 360 ---IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE--T-----GTP--------EQPGKQNLPG------A 415 (429)
T ss_dssp ---HGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECS--S-----BCS--------SSBSEEECCC------T
T ss_pred ---HHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeC--C-----CCC--------CCCeEEECCC------C
Confidence 99999999999999999999999999999999999999876 1 110 0123577784 6
Q ss_pred CCCCcEEEEeeecc
Q psy17793 299 TDTIGFFICKLRKK 312 (397)
Q Consensus 299 ~~t~GFFiA~l~K~ 312 (397)
++++|||+|+|+|.
T Consensus 416 ~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 416 EEGDGFFYAKLIKK 429 (429)
T ss_dssp TSCCSEEEEEEEC-
T ss_pred CCCCceEEEEEEEC
Confidence 78999999999984
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=3.6e-37 Score=295.81 Aligned_cols=215 Identities=39% Similarity=0.541 Sum_probs=171.2
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+..|++++||.+|++++.++++++|++|||+|||||++|+++|+++.+.++|+|+|+|+.+++.+++|++++|+.+++++
T Consensus 60 ~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~ 139 (274)
T 3ajd_A 60 YLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIII 139 (274)
T ss_dssp HHTTSEEECCSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred hhCCeEEEeCHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 67999999999999999999999999999999999999999999887678999999999999999999999999999999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQ 221 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~ 221 (397)
..|+..+... .....+.||+|++||||||+|..... ..|+ .+.+..+...|.++|++
T Consensus 140 ~~D~~~~~~~-------~~~~~~~fD~Vl~d~Pcs~~g~~~~~-p~~~----~~~~~~~~~~~~~~l~~----------- 196 (274)
T 3ajd_A 140 NADMRKYKDY-------LLKNEIFFDKILLDAPCSGNIIKDKN-RNVS----EEDIKYCSLRQKELIDI----------- 196 (274)
T ss_dssp ESCHHHHHHH-------HHHTTCCEEEEEEEECCC-----------------HHHHTGGGTCHHHHHHH-----------
T ss_pred eCChHhcchh-------hhhccccCCEEEEcCCCCCCcccccC-CCCC----HHHHHHHHHHHHHHHHH-----------
Confidence 9998765210 00024689999999999999942111 1455 67888888899999999
Q ss_pred ccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecCcccCCCCCccCCCchhhhcceEEeCCCCCCCCCCCCC
Q psy17793 222 GIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRNTDT 301 (397)
Q Consensus 222 a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~r~~P~~~t~~~~~~t 301 (397)
+.++|||||+|+|+|||++++|||++|+++|+++++++++++... ..+|+..... ....+.|++|+ . +
T Consensus 197 ~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~P~------~--~ 264 (274)
T 3ajd_A 197 GIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIKAN-EFKGINIKEG---YIKGTLRVFPP------N--E 264 (274)
T ss_dssp HHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEEECCCST-TCTTSCEEEC---SSTTCEEECTT------S--C
T ss_pred HHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEEecCccc-cccCcccccc---cCCCeEEECCC------C--C
Confidence 999999999999999999999999999999999999999887521 1122211111 11356889885 2 2
Q ss_pred CcEEEEeeecc
Q psy17793 302 IGFFICKLRKK 312 (397)
Q Consensus 302 ~GFFiA~l~K~ 312 (397)
+ ||+|+|+|.
T Consensus 265 ~-ff~a~l~k~ 274 (274)
T 3ajd_A 265 P-FFIAKLRKI 274 (274)
T ss_dssp C-EEEEEEEEC
T ss_pred C-EEEEEEEEC
Confidence 3 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.82 E-value=9.2e-20 Score=183.59 Aligned_cols=193 Identities=17% Similarity=0.197 Sum_probs=143.9
Q ss_pred cccccccccccccccccccceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHH
Q psy17793 26 ARQRPSLSIYCYALDILFRGVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIA 104 (397)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA 104 (397)
++......+..+.. +.-+.+++.+..+.++... +++|.|+.|+.+..++...+ ++|++|||+|||+|++|+++|
T Consensus 159 ~g~~~~~~~l~G~~---~~~~~v~E~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a 233 (393)
T 4dmg_A 159 EGLPERVGVVYGEV---PEVLEVEEDGLRFPIPLALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAA 233 (393)
T ss_dssp TTCCCCCEEEEECC---CSEEEEEETTEEEEEETTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHH
T ss_pred cCCCcccceEecCC---CCcEEEEECCEEEEEechhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHH
Confidence 44444455444432 3557778887777665444 88999999999988887664 468999999999999999998
Q ss_pred HHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCccc
Q psy17793 105 LLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMF 184 (397)
Q Consensus 105 ~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~ 184 (397)
.. + ..|+|+|+|+.+++.+++|++.+|+.+ ++.++|+..+... . .+.||+|++||||...+
T Consensus 234 ~~--g-a~V~avDis~~al~~a~~n~~~ng~~~-~~~~~D~~~~l~~---------~-~~~fD~Ii~dpP~f~~~----- 294 (393)
T 4dmg_A 234 RK--G-AYALAVDKDLEALGVLDQAALRLGLRV-DIRHGEALPTLRG---------L-EGPFHHVLLDPPTLVKR----- 294 (393)
T ss_dssp HT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC-EEEESCHHHHHHT---------C-CCCEEEEEECCCCCCSS-----
T ss_pred Hc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC-cEEEccHHHHHHH---------h-cCCCCEEEECCCcCCCC-----
Confidence 84 3 449999999999999999999999874 5668888765311 2 33499999999985422
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccccH--HHHHHHHHH-CCCcEEE
Q psy17793 185 YNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENE--AVIAWILHR-HPEVELV 261 (397)
Q Consensus 185 ~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE--~vV~~~L~~-~~~~~l~ 261 (397)
...+......+.+++.. +.++|||||.|+|+|||.+..+++ +.+...+.+ ...++++
T Consensus 295 ---------~~~~~~~~~~~~~ll~~-----------a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 295 ---------PEELPAMKRHLVDLVRE-----------ALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp ---------GGGHHHHHHHHHHHHHH-----------HHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ---------HHHHHHHHHHHHHHHHH-----------HHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 23344444556888999 999999999999999999887776 566666554 3346555
Q ss_pred e
Q psy17793 262 Q 262 (397)
Q Consensus 262 ~ 262 (397)
.
T Consensus 355 ~ 355 (393)
T 4dmg_A 355 R 355 (393)
T ss_dssp E
T ss_pred E
Confidence 4
No 11
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.76 E-value=4.9e-18 Score=170.10 Aligned_cols=180 Identities=23% Similarity=0.281 Sum_probs=134.7
Q ss_pred cceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHH
Q psy17793 44 RGVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPR 122 (397)
Q Consensus 44 ~gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~r 122 (397)
+.+.+++.+..+.+.... +.+|+|+.|.....+++.+ ++++|||+|||+|+++.++|.. ..+|+|+|+|+.+
T Consensus 171 ~~~~~~e~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~ 243 (382)
T 1wxx_A 171 ERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEA 243 (382)
T ss_dssp SEEEEEETTEEEEEECSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHH
T ss_pred ceEEEEECCEEEEEEchhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHH
Confidence 445566665555554433 6789888888776665544 6889999999999999999986 4789999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHH
Q psy17793 123 VTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYAN 202 (397)
Q Consensus 123 l~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~ 202 (397)
++.+++|++.+|+.+++++++|+...... ......+||+|++|||+.+... ..+.....
T Consensus 244 ~~~a~~n~~~n~~~~~~~~~~d~~~~~~~-------~~~~~~~fD~Ii~dpP~~~~~~--------------~~~~~~~~ 302 (382)
T 1wxx_A 244 LRRAEENARLNGLGNVRVLEANAFDLLRR-------LEKEGERFDLVVLDPPAFAKGK--------------KDVERAYR 302 (382)
T ss_dssp HHHHHHHHHHTTCTTEEEEESCHHHHHHH-------HHHTTCCEEEEEECCCCSCCST--------------TSHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEEECCHHHHHHH-------HHhcCCCeeEEEECCCCCCCCh--------------hHHHHHHH
Confidence 99999999999998899999999775311 0011468999999999766431 22233344
Q ss_pred HHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcccc--HHHHHHHHHHC-CCcEEEe
Q psy17793 203 IQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEEN--EAVIAWILHRH-PEVELVQ 262 (397)
Q Consensus 203 ~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEn--E~vV~~~L~~~-~~~~l~~ 262 (397)
.+.+++.. +.++|+|||.|++++|+.+..++ ++.+...+.+. ..++++.
T Consensus 303 ~~~~~l~~-----------~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 303 AYKEVNLR-----------AIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp HHHHHHHH-----------HHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHH-----------HHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 45788888 99999999999999999877664 56666555444 3566664
No 12
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.74 E-value=1.9e-17 Score=155.32 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=103.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+++|++|||+|||||++|.++|.++++.|+|+|+|+++.+++.+.+.+++. .||.++.+|++..... ..
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~--------~~ 142 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSY--------KS 142 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGT--------TT
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhh--------hc
Confidence 3789999999999999999999999988899999999999988777666553 5899999999764210 01
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHH-HHhhhhccccccccccccCCcEEEEE---ec
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQ-AVYRFVSLFDWQGIPLLKKDGILVYC---TC 237 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~-~~~~f~~~~~~~a~~lLkpgG~lvys---TC 237 (397)
..++||+|++|.+- ..|.++|. . +.++|||||+|+++ +|
T Consensus 143 ~~~~~D~I~~d~a~--------------------------~~~~~il~~~-----------~~~~LkpGG~lvisik~~~ 185 (232)
T 3id6_C 143 VVENVDVLYVDIAQ--------------------------PDQTDIAIYN-----------AKFFLKVNGDMLLVIKARS 185 (232)
T ss_dssp TCCCEEEEEECCCC--------------------------TTHHHHHHHH-----------HHHHEEEEEEEEEEEC---
T ss_pred cccceEEEEecCCC--------------------------hhHHHHHHHH-----------HHHhCCCCeEEEEEEccCC
Confidence 23689999999761 01233333 3 55589999999977 89
Q ss_pred ---CCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 238 ---SLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 238 ---S~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
++.++||.+.+.++|+++ +|+++..
T Consensus 186 ~d~t~~~~e~~~~~~~~L~~~-gf~~~~~ 213 (232)
T 3id6_C 186 IDVTKDPKEIYKTEVEKLENS-NFETIQI 213 (232)
T ss_dssp ----CCSSSSTTHHHHHHHHT-TEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHHC-CCEEEEE
Confidence 899999999999999988 4887764
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.73 E-value=2.9e-17 Score=165.03 Aligned_cols=176 Identities=22% Similarity=0.263 Sum_probs=129.8
Q ss_pred cceEEEEccccccCCCcccCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHH
Q psy17793 44 RGVAVEITNVLSQVPNVALDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRV 123 (397)
Q Consensus 44 ~gi~v~~~~~~~~~p~~~~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl 123 (397)
+.+.+.+.+..+.++.-.+++|+|+.|.....++..++ +++++|||+|||+|+++.++|.. +..+|+|+|+|+.++
T Consensus 178 ~~~~~~e~g~~~~~~~~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l 253 (396)
T 2as0_A 178 YRTIIQEGRAKFIVDMRGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAI 253 (396)
T ss_dssp CEEEEEETTEEEEEESSSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHH
T ss_pred ceEEEEeCCEEEEEeccccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHH
Confidence 34555555555555442267788877777777766553 47899999999999999999884 456999999999999
Q ss_pred HHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHH
Q psy17793 124 TKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYAN 202 (397)
Q Consensus 124 ~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~ 202 (397)
+.+++|++.+|++ +++++++|+...... .....++||+|++|||+.+.. ...+.....
T Consensus 254 ~~a~~n~~~n~~~~~v~~~~~d~~~~~~~-------~~~~~~~fD~Vi~dpP~~~~~--------------~~~~~~~~~ 312 (396)
T 2as0_A 254 ETAKENAKLNGVEDRMKFIVGSAFEEMEK-------LQKKGEKFDIVVLDPPAFVQH--------------EKDLKAGLR 312 (396)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHH-------HHHTTCCEEEEEECCCCSCSS--------------GGGHHHHHH
T ss_pred HHHHHHHHHcCCCccceEEECCHHHHHHH-------HHhhCCCCCEEEECCCCCCCC--------------HHHHHHHHH
Confidence 9999999999997 799999998765311 001246899999999975532 122333334
Q ss_pred HHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccc--cHHHHHHHHHHC
Q psy17793 203 IQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEE--NEAVIAWILHRH 255 (397)
Q Consensus 203 ~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eE--nE~vV~~~L~~~ 255 (397)
.+.+++.. +.++|||||.|+|++|+.+..+ .++.+.......
T Consensus 313 ~~~~~l~~-----------~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~ 356 (396)
T 2as0_A 313 AYFNVNFA-----------GLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKA 356 (396)
T ss_dssp HHHHHHHH-----------HHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-----------HHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 45778888 9999999999999999976544 456666555554
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.72 E-value=1.5e-17 Score=167.27 Aligned_cols=181 Identities=16% Similarity=0.157 Sum_probs=133.6
Q ss_pred ceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHH
Q psy17793 45 GVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRV 123 (397)
Q Consensus 45 gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl 123 (397)
.+.+++.+..+.++... +++|+|..|.....++..+ .++++|||+|||+|++++++|.. +..+|+|+|+|+.++
T Consensus 182 ~~~~~~~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al 256 (396)
T 3c0k_A 182 LLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEAL 256 (396)
T ss_dssp SEEEEETTEEEEECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHH
T ss_pred eEEEEECCEEEEEeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHH
Confidence 46666666656555443 7789998888887777665 57889999999999999999884 356999999999999
Q ss_pred HHHHHHHHHhCC-C-cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHH
Q psy17793 124 TKLEETIKKLQL-S-SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYA 201 (397)
Q Consensus 124 ~~l~~n~~~~g~-~-~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~ 201 (397)
+.+++|++.+|+ + +++++.+|+...... ......+||+|++|||+.+.... .. .. ..
T Consensus 257 ~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~-------~~~~~~~fD~Ii~dpP~~~~~~~-~~-~~------------~~ 315 (396)
T 3c0k_A 257 DIARQNVELNKLDLSKAEFVRDDVFKLLRT-------YRDRGEKFDVIVMDPPKFVENKS-QL-MG------------AC 315 (396)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHH-------HHHTTCCEEEEEECCSSTTTCSS-SS-SC------------CC
T ss_pred HHHHHHHHHcCCCccceEEEECCHHHHHHH-------HHhcCCCCCEEEECCCCCCCChh-HH-HH------------HH
Confidence 999999999999 6 899999999776311 00113589999999998664321 00 00 01
Q ss_pred HHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc--ccHHHHHHHHH-HCCCcEEEe
Q psy17793 202 NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE--ENEAVIAWILH-RHPEVELVQ 262 (397)
Q Consensus 202 ~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e--EnE~vV~~~L~-~~~~~~l~~ 262 (397)
..+.+++.. +.++|+|||++++++|+.+.. ++++.+...+. ....++++.
T Consensus 316 ~~~~~~l~~-----------~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 316 RGYKDINML-----------AIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp THHHHHHHH-----------HHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHH-----------HHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 123567777 999999999999999997655 66777775554 444566654
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.72 E-value=2.8e-17 Score=176.69 Aligned_cols=179 Identities=16% Similarity=0.152 Sum_probs=134.2
Q ss_pred ccceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHH
Q psy17793 43 FRGVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKP 121 (397)
Q Consensus 43 ~~gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~ 121 (397)
+.-+.+.+.+..+.++... +++|+|+.|.....++.... +|.+|||+|||+|++++++|. .+..+|+++|+|+.
T Consensus 499 ~~~~~v~E~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~ 573 (703)
T 3v97_A 499 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRT 573 (703)
T ss_dssp SCCEEEEETTEEEEECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHH
T ss_pred CceEEEEECCEEEEEeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHH
Confidence 3456677777766665444 78999999999888877654 588999999999999998887 35668999999999
Q ss_pred HHHHHHHHHHHhCCC--cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHH
Q psy17793 122 RVTKLEETIKKLQLS--SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKS 199 (397)
Q Consensus 122 rl~~l~~n~~~~g~~--~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~ 199 (397)
+++.+++|++.+|+. +++++++|+..+.. ...++||+|++||||.+.+.... ....
T Consensus 574 al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~----------~~~~~fD~Ii~DPP~f~~~~~~~------------~~~~ 631 (703)
T 3v97_A 574 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR----------EANEQFDLIFIDPPTFSNSKRME------------DAFD 631 (703)
T ss_dssp HHHHHHHHHHHTTCCSTTEEEEESCHHHHHH----------HCCCCEEEEEECCCSBC-------------------CCB
T ss_pred HHHHHHHHHHHcCCCccceEEEecCHHHHHH----------hcCCCccEEEECCccccCCccch------------hHHH
Confidence 999999999999997 69999999987531 23468999999999876443210 1111
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecC
Q psy17793 200 YANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 200 l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
....+.+++.. +.++|||||+|++++|+-....+++. ++++ +++...+.
T Consensus 632 ~~~~~~~ll~~-----------a~~~LkpgG~L~~s~~~~~~~~~~~~----l~~~-g~~~~~i~ 680 (703)
T 3v97_A 632 VQRDHLALMKD-----------LKRLLRAGGTIMFSNNKRGFRMDLDG----LAKL-GLKAQEIT 680 (703)
T ss_dssp HHHHHHHHHHH-----------HHHHEEEEEEEEEEECCTTCCCCHHH----HHHT-TEEEEECT
T ss_pred HHHHHHHHHHH-----------HHHhcCCCcEEEEEECCcccccCHHH----HHHc-CCceeeee
Confidence 22334778888 99999999999999999666666543 3444 46655543
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=1.9e-16 Score=149.65 Aligned_cols=166 Identities=15% Similarity=0.199 Sum_probs=116.3
Q ss_pred CCcEEEechh-------HHHHHhccCCC-CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 64 SSMGILQNLP-------SILAGHYLDVQ-PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 64 ~g~~~~Qd~~-------S~l~~~~L~~~-~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
.++.++|+.. +.+++.++.+. ++.+|||+|||+|..+..+|... .++|+|+|+++.+++.+++|++.+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCC
Confidence 4556667766 78888888888 89999999999999999998863 34999999999999999999999998
Q ss_pred C-cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCC---CC-CcccccccCccchHHHHHHHHHHHHHHHHH
Q psy17793 136 S-SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGF---GQ-RPMFYNANSFLNLDKKIKSYANIQKKLLQA 210 (397)
Q Consensus 136 ~-~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~---G~-~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~ 210 (397)
. +++++.+|+..+.. .+..++||+|++||||... |. .++..... ........ ...+++.
T Consensus 98 ~~~v~~~~~D~~~~~~---------~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~------a~~~~~~~-~~~~l~~ 161 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITD---------LIPKERADIVTCNPPYFATPDTSLKNTNEHFRI------ARHEVMCT-LEDTIRV 161 (259)
T ss_dssp TTTEEEECSCGGGGGG---------TSCTTCEEEEEECCCC-----------------------------HH-HHHHHHH
T ss_pred cccEEEEECcHHHhhh---------hhccCCccEEEECCCCCCCccccCCCCchHHHh------hhccccCC-HHHHHHH
Confidence 7 59999999987631 1335789999999999765 32 22111111 11111111 2567888
Q ss_pred HhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 211 VYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 211 ~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+.++|||||++++. .+.+....+...++++ ++....+
T Consensus 162 -----------~~~~LkpgG~l~~~----~~~~~~~~~~~~l~~~-~~~~~~~ 198 (259)
T 3lpm_A 162 -----------AASLLKQGGKANFV----HRPERLLDIIDIMRKY-RLEPKRI 198 (259)
T ss_dssp -----------HHHHEEEEEEEEEE----ECTTTHHHHHHHHHHT-TEEEEEE
T ss_pred -----------HHHHccCCcEEEEE----EcHHHHHHHHHHHHHC-CCceEEE
Confidence 99999999999995 2334444566667776 4555443
No 17
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.69 E-value=5.3e-17 Score=162.95 Aligned_cols=175 Identities=14% Similarity=0.101 Sum_probs=126.4
Q ss_pred ceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHH
Q psy17793 45 GVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRV 123 (397)
Q Consensus 45 gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl 123 (397)
-+.+.+.+..+.++... +++|.|..|.....+....+ .+|++|||+|||+|++++++|.. +..+|+++|+|+.++
T Consensus 173 ~~~v~e~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al 248 (385)
T 2b78_A 173 QFLILENGISYNVFLNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSR 248 (385)
T ss_dssp SEEEEETTEEEEECSSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHH
T ss_pred eEEEEECCEEEEEeccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHH
Confidence 45556655555554443 67888877777777776665 57889999999999999999874 345899999999999
Q ss_pred HHHHHHHHHhCCC--cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHH
Q psy17793 124 TKLEETIKKLQLS--SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYA 201 (397)
Q Consensus 124 ~~l~~n~~~~g~~--~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~ 201 (397)
+.+++|++.+|++ +++++++|+...... ......+||+|++|||+.+.+.. .. ...+..
T Consensus 249 ~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~-------~~~~~~~fD~Ii~DPP~~~~~~~------~~----~~~~~~-- 309 (385)
T 2b78_A 249 ALSLAHFEANHLDMANHQLVVMDVFDYFKY-------ARRHHLTYDIIIIDPPSFARNKK------EV----FSVSKD-- 309 (385)
T ss_dssp HHHHHHHHHTTCCCTTEEEEESCHHHHHHH-------HHHTTCCEEEEEECCCCC-----------CC----CCHHHH--
T ss_pred HHHHHHHHHcCCCccceEEEECCHHHHHHH-------HHHhCCCccEEEECCCCCCCChh------hH----HHHHHH--
Confidence 9999999999997 899999999765311 01123579999999998653210 00 122222
Q ss_pred HHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc--cccHHHHHHHHHHC
Q psy17793 202 NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV--EENEAVIAWILHRH 255 (397)
Q Consensus 202 ~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~--eEnE~vV~~~L~~~ 255 (397)
..+++.. +.++|+|||.|++++|+-.. ++..+.+...+.+.
T Consensus 310 --~~~ll~~-----------~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 352 (385)
T 2b78_A 310 --YHKLIRQ-----------GLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQ 352 (385)
T ss_dssp --HHHHHHH-----------HHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTC
T ss_pred --HHHHHHH-----------HHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHc
Confidence 2667888 99999999999999998654 44555666666555
No 18
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.67 E-value=2.2e-16 Score=155.54 Aligned_cols=163 Identities=17% Similarity=0.086 Sum_probs=119.4
Q ss_pred cceEEEEccccccCCCcc-cCCCcEEEechhHHHHHhccC-CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHH
Q psy17793 44 RGVAVEITNVLSQVPNVA-LDSSMGILQNLPSILAGHYLD-VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKP 121 (397)
Q Consensus 44 ~gi~v~~~~~~~~~p~~~-~~~g~~~~Qd~~S~l~~~~L~-~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~ 121 (397)
+.+.+++.+..+.+.... +++|++..|.....++...+. ..++.+|||+|||+|+.+..+|.. + .+|+++|+|+.
T Consensus 110 ~~~~i~e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~ 186 (332)
T 2igt_A 110 ETWPLSLLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKK 186 (332)
T ss_dssp SEEEEEETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHH
T ss_pred CceEEEECCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHH
Confidence 566677766656554444 678888888887766666664 456789999999999999999883 3 49999999999
Q ss_pred HHHHHHHHHHHhCCCc--EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHH
Q psy17793 122 RVTKLEETIKKLQLSS--IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKS 199 (397)
Q Consensus 122 rl~~l~~n~~~~g~~~--v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~ 199 (397)
+++.+++|++.+++.+ ++++++|+.++... .....++||+|++||||.+.+..... + ...
T Consensus 187 al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~-------~~~~~~~fD~Ii~dPP~~~~~~~~~~---~------~~~-- 248 (332)
T 2igt_A 187 AIGWAKENQVLAGLEQAPIRWICEDAMKFIQR-------EERRGSTYDIILTDPPKFGRGTHGEV---W------QLF-- 248 (332)
T ss_dssp HHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH-------HHHHTCCBSEEEECCCSEEECTTCCE---E------EHH--
T ss_pred HHHHHHHHHHHcCCCccceEEEECcHHHHHHH-------HHhcCCCceEEEECCccccCCchHHH---H------HHH--
Confidence 9999999999999875 99999999775310 00114689999999998775532111 1 111
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCCcE-EEEEecCCC
Q psy17793 200 YANIQKKLLQAVYRFVSLFDWQGIPLLKKDGI-LVYCTCSLS 240 (397)
Q Consensus 200 l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~-lvysTCS~~ 240 (397)
....+++.. +.++|||||. ++.++|+..
T Consensus 249 --~~~~~ll~~-----------~~~~LkpgG~lli~~~~~~~ 277 (332)
T 2igt_A 249 --DHLPLMLDI-----------CREILSPKALGLVLTAYSIR 277 (332)
T ss_dssp --HHHHHHHHH-----------HHHTBCTTCCEEEEEECCTT
T ss_pred --HHHHHHHHH-----------HHHhcCcCcEEEEEECCCCC
Confidence 122677888 9999999999 455566644
No 19
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.66 E-value=1.2e-15 Score=140.48 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=111.8
Q ss_pred EEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccc
Q psy17793 68 ILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDST 146 (397)
Q Consensus 68 ~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~ 146 (397)
.+++....++..++...++.+|||+|||+|..+.++|..+...++|+++|+++.+++.++++++++|+. +|+++.+|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQ 120 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHH
Confidence 356667777777777778899999999999999999997766789999999999999999999999986 4999999987
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
...... ...+..++||+|++|+++. .... ..+++.. . ++|
T Consensus 121 ~~l~~~-----~~~~~~~~fD~V~~d~~~~-------------------~~~~----~~~~~~~-----------~-~~L 160 (221)
T 3u81_A 121 DLIPQL-----KKKYDVDTLDMVFLDHWKD-------------------RYLP----DTLLLEK-----------C-GLL 160 (221)
T ss_dssp HHGGGT-----TTTSCCCCCSEEEECSCGG-------------------GHHH----HHHHHHH-----------T-TCC
T ss_pred HHHHHH-----HHhcCCCceEEEEEcCCcc-------------------cchH----HHHHHHh-----------c-ccc
Confidence 643110 0001126899999998621 1111 1345665 6 999
Q ss_pred cCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEE
Q psy17793 227 KKDGILVYCTCSLSVEENEAVIAWILHRHPEVELV 261 (397)
Q Consensus 227 kpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~ 261 (397)
||||+|++.+|... ..+ ....++++++.++..
T Consensus 161 kpgG~lv~~~~~~~--~~~-~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 161 RKGTVLLADNVIVP--GTP-DFLAYVRGSSSFECT 192 (221)
T ss_dssp CTTCEEEESCCCCC--CCH-HHHHHHHHCTTEEEE
T ss_pred CCCeEEEEeCCCCc--chH-HHHHHHhhCCCceEE
Confidence 99999999988743 223 445566777766544
No 20
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=2.7e-15 Score=141.20 Aligned_cols=126 Identities=12% Similarity=0.162 Sum_probs=100.8
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+..+|..+++.++|+++|+|+.+++.+++++++.|+. +|++..+|+..
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34566666666666678899999999999999999998765789999999999999999999999997 69999999876
Q ss_pred ccccchhhHHHhhh-cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 148 INTSSQIDIERMKL-QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 148 ~~~~~~~d~~~~~~-~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
.... . ..++||+|++|+++. .. ..+++. +.++|
T Consensus 127 ~l~~---------~~~~~~fD~V~~d~~~~-------------------~~-------~~~l~~-----------~~~~L 160 (248)
T 3tfw_A 127 SLES---------LGECPAFDLIFIDADKP-------------------NN-------PHYLRW-----------ALRYS 160 (248)
T ss_dssp HHHT---------CCSCCCCSEEEECSCGG-------------------GH-------HHHHHH-----------HHHTC
T ss_pred HHHh---------cCCCCCeEEEEECCchH-------------------HH-------HHHHHH-----------HHHhc
Confidence 4311 1 124899999998721 11 235666 88999
Q ss_pred cCCcEEEEEecCCC
Q psy17793 227 KKDGILVYCTCSLS 240 (397)
Q Consensus 227 kpgG~lvysTCS~~ 240 (397)
||||+|++.++...
T Consensus 161 kpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 161 RPGTLIIGDNVVRD 174 (248)
T ss_dssp CTTCEEEEECCSGG
T ss_pred CCCeEEEEeCCCcC
Confidence 99999999887654
No 21
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.63 E-value=4.4e-15 Score=141.53 Aligned_cols=163 Identities=13% Similarity=0.077 Sum_probs=114.9
Q ss_pred CCcEEEechhHHHHHhccCC--CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 64 SSMGILQNLPSILAGHYLDV--QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~--~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
.+.++.+..+..++..+++. .++.+|||+|||+|..+..++... +..+|+|+|+|+.+++.+++|++++|+.++++.
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~ 164 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHIL 164 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 44444455555555544432 567899999999999999999875 467999999999999999999999999899999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCC---CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQ---RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLF 218 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~---~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~ 218 (397)
.+|+.... ..++||+|++||||.+.+. .++.........+......+. ..+++++.
T Consensus 165 ~~d~~~~~------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~-~~~~~l~~-------- 223 (276)
T 2b3t_A 165 QSDWFSAL------------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMA-DIVHIIEQ-------- 223 (276)
T ss_dssp CCSTTGGG------------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTH-HHHHHHHH--------
T ss_pred Ecchhhhc------------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHH-HHHHHHHH--------
Confidence 99987642 2468999999999988753 111111111000001111222 22778888
Q ss_pred cccccccccCCcEEEEEecCCCccccHHHHHHHHHHC
Q psy17793 219 DWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 219 ~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~ 255 (397)
+.++|||||.+++..+. .+.+.+..++++.
T Consensus 224 ---~~~~LkpgG~l~~~~~~----~~~~~~~~~l~~~ 253 (276)
T 2b3t_A 224 ---SRNALVSGGFLLLEHGW----QQGEAVRQAFILA 253 (276)
T ss_dssp ---HGGGEEEEEEEEEECCS----SCHHHHHHHHHHT
T ss_pred ---HHHhcCCCCEEEEEECc----hHHHHHHHHHHHC
Confidence 99999999999997543 3455667777765
No 22
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.61 E-value=6e-16 Score=154.99 Aligned_cols=136 Identities=18% Similarity=0.108 Sum_probs=100.9
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh---------------C
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL---------------Q 134 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~---------------g 134 (397)
|.....+...++...++.+|||+|||+|.+++.+|..++ ..+|+++|+|+.+++.+++|++++ |
T Consensus 32 ~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g 110 (378)
T 2dul_A 32 MALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG 110 (378)
T ss_dssp GHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES
T ss_pred hHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC
Confidence 444444433333223688999999999999999999864 467999999999999999999999 8
Q ss_pred CCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhh
Q psy17793 135 LSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRF 214 (397)
Q Consensus 135 ~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f 214 (397)
+.+++++++|+..+.. ...+.||+|++||||+. ..+|+.
T Consensus 111 l~~i~v~~~Da~~~~~----------~~~~~fD~I~lDP~~~~---------------------------~~~l~~---- 149 (378)
T 2dul_A 111 EKTIVINHDDANRLMA----------ERHRYFHFIDLDPFGSP---------------------------MEFLDT---- 149 (378)
T ss_dssp SSEEEEEESCHHHHHH----------HSTTCEEEEEECCSSCC---------------------------HHHHHH----
T ss_pred CCceEEEcCcHHHHHH----------hccCCCCEEEeCCCCCH---------------------------HHHHHH----
Confidence 8789999999977631 11357999999999753 345666
Q ss_pred hccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHC
Q psy17793 215 VSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 215 ~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~ 255 (397)
+.+.||+|| ++|.||+-....+.......+.++
T Consensus 150 -------a~~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~y 182 (378)
T 2dul_A 150 -------ALRSAKRRG-ILGVTATDGAPLCGAHPRACLRKY 182 (378)
T ss_dssp -------HHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHH
T ss_pred -------HHHhcCCCC-EEEEEeecchhhccccHHHHHHHc
Confidence 888999999 678899754432222344455555
No 23
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.60 E-value=7.8e-16 Score=154.69 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEEEcccccccc-cchhhHHHhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS--IQTHVYDSTRINT-SSQIDIERMK 160 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~--v~~~~~D~~~~~~-~~~~d~~~~~ 160 (397)
++|++|||+|||+|++++.+|..+.+.++|+++|+++.+++.+++|++.+|+++ ++++++|+..+.. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--------- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--------- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC---------
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh---------
Confidence 578999999999999999999976545799999999999999999999999987 9999999987632 1
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
..+.||+|++||+|+. ..+++. +.++|++|| ++|+||+-.
T Consensus 122 -~~~~fD~V~lDP~g~~---------------------------~~~l~~-----------a~~~Lk~gG-ll~~t~t~~ 161 (392)
T 3axs_A 122 -WGFGFDYVDLDPFGTP---------------------------VPFIES-----------VALSMKRGG-ILSLTATDT 161 (392)
T ss_dssp -CSSCEEEEEECCSSCC---------------------------HHHHHH-----------HHHHEEEEE-EEEEEECCH
T ss_pred -hCCCCcEEEECCCcCH---------------------------HHHHHH-----------HHHHhCCCC-EEEEEecch
Confidence 1357999999997431 235566 888899999 778899754
Q ss_pred ccccHHHHHHHHHHC
Q psy17793 241 VEENEAVIAWILHRH 255 (397)
Q Consensus 241 ~eEnE~vV~~~L~~~ 255 (397)
.......+...++++
T Consensus 162 ~~l~g~~~~~~~rkY 176 (392)
T 3axs_A 162 APLSGTYPKTCMRRY 176 (392)
T ss_dssp HHHTTSSHHHHHHHH
T ss_pred hhhccccHHHHHHHh
Confidence 432222334455555
No 24
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.60 E-value=1.1e-14 Score=134.18 Aligned_cols=146 Identities=12% Similarity=0.051 Sum_probs=102.9
Q ss_pred CCCCCeEEEEcCC-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAA-PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcag-pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+++.+|||+||| +|..+..++... ..+|+|+|+|+.+++.+++|++.+++ +++++.+|+..+. .+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~----------~~ 119 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIK----------GV 119 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSST----------TT
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhh----------hc
Confidence 5688999999999 999999999875 57999999999999999999999998 8999999975442 13
Q ss_pred cccCccEEEEcCCCCCCCCC----cccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 162 QKESFDRILLDAPCSGFGQR----PMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~----p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
..++||+|++|||+...+.. |....... .. ... .-.++++. +.++|||||++++.+.
T Consensus 120 ~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~----~~---~~~-~~~~~l~~-----------~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 120 VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGG----KY---GEE-FSVKLLEE-----------AFDHLNPGGKVALYLP 180 (230)
T ss_dssp CCSCEEEEEECCCCC---------------CC----SS---SCH-HHHHHHHH-----------HGGGEEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCcCCccccccChhhhhccC----cc---chH-HHHHHHHH-----------HHHHhCCCeEEEEEec
Confidence 44789999999998765421 10000000 00 011 11567888 9999999999998754
Q ss_pred CCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 238 SLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 238 S~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+ ..+..+.+...+++. ++++..+
T Consensus 181 ~--~~~~~~~~~~~l~~~-g~~~~~~ 203 (230)
T 3evz_A 181 D--KEKLLNVIKERGIKL-GYSVKDI 203 (230)
T ss_dssp S--CHHHHHHHHHHHHHT-TCEEEEE
T ss_pred c--cHhHHHHHHHHHHHc-CCceEEE
Confidence 3 224444566667776 4655544
No 25
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.59 E-value=5.7e-15 Score=135.58 Aligned_cols=129 Identities=12% Similarity=0.162 Sum_probs=99.9
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+.++|..+++.++|+++|+++.+++.+++++++.|+.+ ++++.+|+..
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 345666677666666788999999999999999999987657899999999999999999999999975 9999999876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
.... ......++||+|++|++++. . ..+++. +.++||
T Consensus 122 ~~~~------~~~~~~~~fD~v~~d~~~~~---------------~-----------~~~l~~-----------~~~~L~ 158 (223)
T 3duw_A 122 SLQQ------IENEKYEPFDFIFIDADKQN---------------N-----------PAYFEW-----------ALKLSR 158 (223)
T ss_dssp HHHH------HHHTTCCCCSEEEECSCGGG---------------H-----------HHHHHH-----------HHHTCC
T ss_pred HHHH------HHhcCCCCcCEEEEcCCcHH---------------H-----------HHHHHH-----------HHHhcC
Confidence 4211 00001157999999987311 1 345666 889999
Q ss_pred CCcEEEEEecCCC
Q psy17793 228 KDGILVYCTCSLS 240 (397)
Q Consensus 228 pgG~lvysTCS~~ 240 (397)
|||.|++..+...
T Consensus 159 pgG~lv~~~~~~~ 171 (223)
T 3duw_A 159 PGTVIIGDNVVRE 171 (223)
T ss_dssp TTCEEEEESCSGG
T ss_pred CCcEEEEeCCCcC
Confidence 9999998765543
No 26
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.58 E-value=1.8e-14 Score=142.48 Aligned_cols=142 Identities=22% Similarity=0.199 Sum_probs=110.7
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchh
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~ 154 (397)
..+...+..+++..|||+|||+|..+..+|...++...|+|+|+|+.+++.+++|++++|+.++++.+.|+.++.
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~----- 267 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP----- 267 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG-----
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc-----
Confidence 334455677889999999999999999999876456789999999999999999999999989999999998763
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
.....||+|++||||.- + ......+..++.++++. +.++|||||++++
T Consensus 268 ------~~~~~~D~Ii~npPyg~---r------------~~~~~~~~~~~~~~~~~-----------~~~~LkpgG~l~i 315 (354)
T 3tma_A 268 ------RFFPEVDRILANPPHGL---R------------LGRKEGLFHLYWDFLRG-----------ALALLPPGGRVAL 315 (354)
T ss_dssp ------GTCCCCSEEEECCCSCC-------------------CHHHHHHHHHHHHH-----------HHHTSCTTCEEEE
T ss_pred ------cccCCCCEEEECCCCcC---c------------cCCcccHHHHHHHHHHH-----------HHHhcCCCcEEEE
Confidence 22356899999999732 1 11223344556788888 9999999999999
Q ss_pred EecCCCccccHHHHHHHHHHCCCcEEE
Q psy17793 235 CTCSLSVEENEAVIAWILHRHPEVELV 261 (397)
Q Consensus 235 sTCS~~~eEnE~vV~~~L~~~~~~~l~ 261 (397)
.|| |++.++.+++ . +++..
T Consensus 316 ~t~------~~~~~~~~~~-~-g~~~~ 334 (354)
T 3tma_A 316 LTL------RPALLKRALP-P-GFALR 334 (354)
T ss_dssp EES------CHHHHHHHCC-T-TEEEE
T ss_pred EeC------CHHHHHHHhh-c-CcEEE
Confidence 987 3556666665 3 55554
No 27
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.58 E-value=1.1e-14 Score=129.74 Aligned_cols=135 Identities=13% Similarity=0.141 Sum_probs=95.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+++|++|||+|||+|..+..+|.. .++|+|+|+|+.+++.++++++++|+++++++..|...+. .+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~----------~~~ 86 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD----------HYV 86 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG----------GTC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH----------hhc
Confidence 467899999999999999999885 6799999999999999999999999988999997776542 123
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||.|++++++-..+ ...+......+..+|++ +.++|||||+++.+.++-++.
T Consensus 87 ~~~fD~v~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~-----------~~~~LkpgG~l~i~~~~~~~~ 141 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSA--------------DKSVITKPHTTLEAIEK-----------ILDRLEVGGRLAIMIYYGHDG 141 (185)
T ss_dssp CSCEEEEEEEEC-------------------------CHHHHHHHHHH-----------HHHHEEEEEEEEEEEC-----
T ss_pred cCCcCEEEEeCCCCCCc--------------chhcccChhhHHHHHHH-----------HHHhcCCCcEEEEEEeCCCCC
Confidence 56899999986531110 11222223334667788 999999999999987765543
Q ss_pred ---ccHHHHHHHHHHCC
Q psy17793 243 ---ENEAVIAWILHRHP 256 (397)
Q Consensus 243 ---EnE~vV~~~L~~~~ 256 (397)
|.+ .+..+++..+
T Consensus 142 ~~~~~~-~~~~~~~~l~ 157 (185)
T 3mti_A 142 GDMEKD-AVLEYVIGLD 157 (185)
T ss_dssp -CHHHH-HHHHHHHHSC
T ss_pred CHHHHH-HHHHHHHhCC
Confidence 333 4445555543
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=4.9e-14 Score=127.70 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=110.5
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY 143 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~ 143 (397)
+|.+ .++.....+...+.+.++++|||+|||+|..+..++... +.++|+++|+|+.+++.++++++++|++++++..+
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 3555 455555566667788999999999999999999999874 46899999999999999999999999988999999
Q ss_pred ccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy17793 144 DSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI 223 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~ 223 (397)
|+..... ....||+|+++.+.. .. .++++. +.
T Consensus 98 d~~~~~~-----------~~~~~D~i~~~~~~~---------------~~-----------~~~l~~-----------~~ 129 (204)
T 3e05_A 98 FAPEGLD-----------DLPDPDRVFIGGSGG---------------ML-----------EEIIDA-----------VD 129 (204)
T ss_dssp CTTTTCT-----------TSCCCSEEEESCCTT---------------CH-----------HHHHHH-----------HH
T ss_pred Chhhhhh-----------cCCCCCEEEECCCCc---------------CH-----------HHHHHH-----------HH
Confidence 9865531 125799999987621 01 456777 88
Q ss_pred ccccCCcEEEEEecCCCccccHHHHHHHHHHCC
Q psy17793 224 PLLKKDGILVYCTCSLSVEENEAVIAWILHRHP 256 (397)
Q Consensus 224 ~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~ 256 (397)
++|||||++++++++ .++.+.+...+++.+
T Consensus 130 ~~LkpgG~l~~~~~~---~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 130 RRLKSEGVIVLNAVT---LDTLTKAVEFLEDHG 159 (204)
T ss_dssp HHCCTTCEEEEEECB---HHHHHHHHHHHHHTT
T ss_pred HhcCCCeEEEEEecc---cccHHHHHHHHHHCC
Confidence 999999999998665 345566667777763
No 29
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.58 E-value=9.2e-15 Score=140.04 Aligned_cols=125 Identities=19% Similarity=0.236 Sum_probs=100.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.++|++|||+|||+|..+..+|... ..+|+|+|+|+.+++.+++|++.+|+.+ ++++++|+..+.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~--~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~------------ 188 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------------ 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc------------
Confidence 4678999999999999999999863 2389999999999999999999999986 999999998773
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC--
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL-- 239 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~-- 239 (397)
..++||+|++|||++. .+++.. +.++|||||.+++++|+-
T Consensus 189 ~~~~fD~Vi~~~p~~~---------------------------~~~l~~-----------~~~~LkpgG~l~~~~~~~~~ 230 (278)
T 2frn_A 189 GENIADRILMGYVVRT---------------------------HEFIPK-----------ALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp CCSCEEEEEECCCSSG---------------------------GGGHHH-----------HHHHEEEEEEEEEEEEEEGG
T ss_pred ccCCccEEEECCchhH---------------------------HHHHHH-----------HHHHCCCCeEEEEEEeeccc
Confidence 2468999999999321 234455 888999999999999983
Q ss_pred -CccccHHHHHHHHHHCCCcEE
Q psy17793 240 -SVEENEAVIAWILHRHPEVEL 260 (397)
Q Consensus 240 -~~eEnE~vV~~~L~~~~~~~l 260 (397)
..++..+.+...+++. ++++
T Consensus 231 ~~~~~~~~~i~~~~~~~-G~~~ 251 (278)
T 2frn_A 231 LMPREPFETFKRITKEY-GYDV 251 (278)
T ss_dssp GTTTTTHHHHHHHHHHT-TCEE
T ss_pred cccccHHHHHHHHHHHc-CCee
Confidence 2345555667777776 3444
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.57 E-value=4.6e-14 Score=128.96 Aligned_cols=138 Identities=15% Similarity=0.162 Sum_probs=108.8
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRI 148 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~ 148 (397)
+......+...+.+.++++|||+|||+|..+..+|.. .++|+|+|+|+.+++.++++++++|+. +++++.+|+...
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3444455666778899999999999999999999986 579999999999999999999999998 899999999874
Q ss_pred cccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Q psy17793 149 NTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK 228 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp 228 (397)
.. ....||+|++++.. . . . +++. +.++|||
T Consensus 117 ~~-----------~~~~~D~v~~~~~~-------------~---~-----------~-~l~~-----------~~~~Lkp 146 (204)
T 3njr_A 117 LA-----------DLPLPEAVFIGGGG-------------S---Q-----------A-LYDR-----------LWEWLAP 146 (204)
T ss_dssp GT-----------TSCCCSEEEECSCC-------------C---H-----------H-HHHH-----------HHHHSCT
T ss_pred cc-----------cCCCCCEEEECCcc-------------c---H-----------H-HHHH-----------HHHhcCC
Confidence 21 22479999986630 1 1 3 5666 8889999
Q ss_pred CcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecC
Q psy17793 229 DGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 229 gG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
||++++++++ .++.+.+..++++.+ +++..+.
T Consensus 147 gG~lv~~~~~---~~~~~~~~~~l~~~g-~~i~~i~ 178 (204)
T 3njr_A 147 GTRIVANAVT---LESETLLTQLHARHG-GQLLRID 178 (204)
T ss_dssp TCEEEEEECS---HHHHHHHHHHHHHHC-SEEEEEE
T ss_pred CcEEEEEecC---cccHHHHHHHHHhCC-CcEEEEE
Confidence 9999999876 456666677777763 6666543
No 31
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=1.1e-14 Score=138.94 Aligned_cols=146 Identities=14% Similarity=0.280 Sum_probs=101.8
Q ss_pred CCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEE
Q psy17793 63 DSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-QLSSIQTH 141 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-g~~~v~~~ 141 (397)
..+...+++..+.++...+++.++++|||+|||+|..+.+++..+.+.++|+++|+++.+++.++++++++ |..++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~ 167 (275)
T 1yb2_A 88 RRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS 167 (275)
T ss_dssp ------------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE
T ss_pred cccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 34455566766777778888999999999999999999999997656789999999999999999999999 98889999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQ 221 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~ 221 (397)
.+|+... +..++||+|++|+|- . .++|++
T Consensus 168 ~~d~~~~------------~~~~~fD~Vi~~~~~-----------------~-----------~~~l~~----------- 196 (275)
T 1yb2_A 168 RSDIADF------------ISDQMYDAVIADIPD-----------------P-----------WNHVQK----------- 196 (275)
T ss_dssp CSCTTTC------------CCSCCEEEEEECCSC-----------------G-----------GGSHHH-----------
T ss_pred ECchhcc------------CcCCCccEEEEcCcC-----------------H-----------HHHHHH-----------
Confidence 9998764 234679999998871 1 244566
Q ss_pred ccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 222 GIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 222 a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+.++|||||++++++++.. ..+.+...+++. ++..+..
T Consensus 197 ~~~~LkpgG~l~i~~~~~~---~~~~~~~~l~~~-Gf~~~~~ 234 (275)
T 1yb2_A 197 IASMMKPGSVATFYLPNFD---QSEKTVLSLSAS-GMHHLET 234 (275)
T ss_dssp HHHTEEEEEEEEEEESSHH---HHHHHHHHSGGG-TEEEEEE
T ss_pred HHHHcCCCCEEEEEeCCHH---HHHHHHHHHHHC-CCeEEEE
Confidence 8889999999999987642 223334445544 4665544
No 32
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=4.4e-15 Score=139.54 Aligned_cols=130 Identities=14% Similarity=0.160 Sum_probs=101.1
Q ss_pred EEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccc
Q psy17793 68 ILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDST 146 (397)
Q Consensus 68 ~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~ 146 (397)
.++.....++..++...++.+|||+|||+|..|..+|..++.+++|+++|+++.+++.++++++++|+. +|+++.+|+.
T Consensus 43 ~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 122 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL 122 (242)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 356667777777777677889999999999999999998766789999999999999999999999986 6999999987
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
..... .......++||+|++|++. ... ..+++. +.++|
T Consensus 123 ~~l~~-----~~~~~~~~~fD~V~~d~~~-------------------~~~-------~~~l~~-----------~~~~L 160 (242)
T 3r3h_A 123 DTLHS-----LLNEGGEHQFDFIFIDADK-------------------TNY-------LNYYEL-----------ALKLV 160 (242)
T ss_dssp HHHHH-----HHHHHCSSCEEEEEEESCG-------------------GGH-------HHHHHH-----------HHHHE
T ss_pred HHHHH-----HhhccCCCCEeEEEEcCCh-------------------HHh-------HHHHHH-----------HHHhc
Confidence 65311 0000013689999999861 111 335666 88999
Q ss_pred cCCcEEEEEecCC
Q psy17793 227 KKDGILVYCTCSL 239 (397)
Q Consensus 227 kpgG~lvysTCS~ 239 (397)
||||.|++..+..
T Consensus 161 kpGG~lv~d~~~~ 173 (242)
T 3r3h_A 161 TPKGLIAIDNIFW 173 (242)
T ss_dssp EEEEEEEEECSSS
T ss_pred CCCeEEEEECCcc
Confidence 9999999876543
No 33
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.54 E-value=3e-14 Score=136.94 Aligned_cols=121 Identities=21% Similarity=0.275 Sum_probs=95.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.++|++|||+|||+|.+++.+|.. +..+|+|+|+|+.+++.+++|++.+|+.+ |+++++|++.+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~------------ 188 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------------ 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------------
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc------------
Confidence 478999999999999999999875 45689999999999999999999999976 999999998874
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE-ecC--
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC-TCS-- 238 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys-TCS-- 238 (397)
..+.||+|++|+|+++ .+.|.. |.++||+||.|.|. .+.
T Consensus 189 ~~~~~D~Vi~~~p~~~---------------------------~~~l~~-----------a~~~lk~gG~ih~~~~~~e~ 230 (278)
T 3k6r_A 189 GENIADRILMGYVVRT---------------------------HEFIPK-----------ALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp CCSCEEEEEECCCSSG---------------------------GGGHHH-----------HHHHEEEEEEEEEEEEEEGG
T ss_pred cccCCCEEEECCCCcH---------------------------HHHHHH-----------HHHHcCCCCEEEEEeeeccc
Confidence 3467999999999543 123445 88899999998653 221
Q ss_pred CCccccHHHHHHHHHHC
Q psy17793 239 LSVEENEAVIAWILHRH 255 (397)
Q Consensus 239 ~~~eEnE~vV~~~L~~~ 255 (397)
...++..+.++.+.+..
T Consensus 231 ~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 231 LMPREPFETFKRITKEY 247 (278)
T ss_dssp GTTTTTHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHc
Confidence 22334455677777665
No 34
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.54 E-value=5e-14 Score=130.43 Aligned_cols=129 Identities=18% Similarity=0.311 Sum_probs=105.6
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEE
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHV 142 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~ 142 (397)
.|..++|...+.++..++...++.+|||+|||+|..+..+|..++ .++|+++|+++.+++.++++++++|+. ++++..
T Consensus 33 ~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 111 (233)
T 2gpy_A 33 QQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLF 111 (233)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred cCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 455567888888888888888899999999999999999999864 679999999999999999999999985 599999
Q ss_pred cccccccccchhhHHHhhh-cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy17793 143 YDSTRINTSSQIDIERMKL-QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQ 221 (397)
Q Consensus 143 ~D~~~~~~~~~~d~~~~~~-~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~ 221 (397)
+|+..... .. ..+.||+|++|++|+. +.++++.
T Consensus 112 ~d~~~~~~---------~~~~~~~fD~I~~~~~~~~--------------------------~~~~l~~----------- 145 (233)
T 2gpy_A 112 GDALQLGE---------KLELYPLFDVLFIDAAKGQ--------------------------YRRFFDM----------- 145 (233)
T ss_dssp SCGGGSHH---------HHTTSCCEEEEEEEGGGSC--------------------------HHHHHHH-----------
T ss_pred CCHHHHHH---------hcccCCCccEEEECCCHHH--------------------------HHHHHHH-----------
Confidence 99876421 01 1468999999987421 1456777
Q ss_pred ccccccCCcEEEEEecCC
Q psy17793 222 GIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 222 a~~lLkpgG~lvysTCS~ 239 (397)
+.++|||||+++++++.+
T Consensus 146 ~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 146 YSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp HGGGEEEEEEEEEETTTC
T ss_pred HHHHcCCCeEEEEEcCCc
Confidence 899999999999986543
No 35
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.53 E-value=2.9e-14 Score=131.07 Aligned_cols=112 Identities=23% Similarity=0.228 Sum_probs=92.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEEcccccccccchhhHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ-----LSSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g-----~~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
++++++|||+|||+|.++.+++..++..++|+++|+++.+++.++++++++| ..++++...|+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-------- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC--------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc--------
Confidence 7789999999999999999999987666799999999999999999999976 467999999987542
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
...+.||+|+++.+|.. ++++ +.++|||||++++++|
T Consensus 147 ---~~~~~fD~i~~~~~~~~-----------------------------~~~~-----------~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 147 ---AEEAPYDAIHVGAAAPV-----------------------------VPQA-----------LIDQLKPGGRLILPVG 183 (226)
T ss_dssp ---GGGCCEEEEEECSBBSS-----------------------------CCHH-----------HHHTEEEEEEEEEEES
T ss_pred ---ccCCCcCEEEECCchHH-----------------------------HHHH-----------HHHhcCCCcEEEEEEe
Confidence 13467999999988521 1123 6788999999999999
Q ss_pred CCCccccH
Q psy17793 238 SLSVEENE 245 (397)
Q Consensus 238 S~~~eEnE 245 (397)
+...+++.
T Consensus 184 ~~~~~~~~ 191 (226)
T 1i1n_A 184 PAGGNQML 191 (226)
T ss_dssp CTTSCEEE
T ss_pred cCCCceEE
Confidence 87655544
No 36
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=2.7e-14 Score=128.44 Aligned_cols=139 Identities=14% Similarity=0.202 Sum_probs=102.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
.++++++|||+|||+|..+..++..+++.++|+|+|+|+.+++.++++++.+|+ .+++++++|+..+..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 88 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK---------- 88 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG----------
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh----------
Confidence 457889999999999999999999876667999999999999999999999998 679999999877631
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
+..++||+|++|+|.-..+.. ..... .. ...+++++ +.++|||||++++++++-+
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~---~~~~~----~~-------~~~~~l~~-----------~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDH---SISTR----PE-------TTIQALSK-----------AMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCT---TCBCC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEEECCBT
T ss_pred hccCCceEEEEcCCcccCccc---ccccC----cc-------cHHHHHHH-----------HHHhCcCCCEEEEEEccCC
Confidence 244789999999975211100 00000 11 12457777 9999999999999876544
Q ss_pred ccc--cHHHHHHHHHHC
Q psy17793 241 VEE--NEAVIAWILHRH 255 (397)
Q Consensus 241 ~eE--nE~vV~~~L~~~ 255 (397)
+.. ..+.+..+++..
T Consensus 144 ~~~~~~~~~~~~~~~~l 160 (197)
T 3eey_A 144 DTGFEEKEKVLEFLKGV 160 (197)
T ss_dssp TTBSHHHHHHHHHHTTS
T ss_pred CCcHHHHHHHHHHHHhC
Confidence 332 233445555443
No 37
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.52 E-value=5.9e-14 Score=131.49 Aligned_cols=110 Identities=15% Similarity=0.253 Sum_probs=90.2
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
|.++||++|||+|||+|..+.++|..+++.|+|+|+|+++.+++.+++++++. .|+..+..|...... .+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~--------~~ 142 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEK--------YR 142 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGG--------GT
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccc--------cc
Confidence 45899999999999999999999999999999999999999999999988765 488999998876521 22
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
...++||+|++|.+... . ...++.+ +.+.|||||+++.+.
T Consensus 143 ~~~~~vDvVf~d~~~~~------------------~-------~~~~l~~-----------~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPE------------------Q-------AAIVVRN-----------ARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTCCCEEEEEECCCCTT------------------H-------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred cccceEEEEEEeccCCh------------------h-------HHHHHHH-----------HHHhccCCCEEEEEE
Confidence 44578999999987321 1 1446677 889999999999873
No 38
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=9.4e-15 Score=131.97 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.++++++.++. ++++..+|+...... .....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-------~~~~~ 99 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIE-------RAERG 99 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHHHHHHH-------HHHTT
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhh-------hhhcc
Confidence 678899999999999999999974 467999999999999999999999988 788888888653100 00123
Q ss_pred cCccEEEEcCCCCCCCCCc----ccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 164 ESFDRILLDAPCSGFGQRP----MFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p----~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
++||+|++|||+...+... ..........+......+ ....+++++ +.++|||||++++.++.
T Consensus 100 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~-----------~~~~LkpgG~l~~~~~~- 166 (215)
T 4dzr_A 100 RPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGL-QFYRRMAAL-----------PPYVLARGRAGVFLEVG- 166 (215)
T ss_dssp CCBSEEEECCCCCC------------------------CTT-HHHHHHHTC-----------CGGGBCSSSEEEEEECT-
T ss_pred CcccEEEECCCCCCCccccccChhhhccCccccccCCCcHH-HHHHHHHHH-----------HHHHhcCCCeEEEEEEC-
Confidence 7899999999997655211 110000000000000011 111566777 99999999995555443
Q ss_pred CccccHHHHHHHHH
Q psy17793 240 SVEENEAVIAWILH 253 (397)
Q Consensus 240 ~~eEnE~vV~~~L~ 253 (397)
....+.+..+++
T Consensus 167 --~~~~~~~~~~l~ 178 (215)
T 4dzr_A 167 --HNQADEVARLFA 178 (215)
T ss_dssp --TSCHHHHHHHTG
T ss_pred --CccHHHHHHHHH
Confidence 334445555555
No 39
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=1.5e-13 Score=123.05 Aligned_cols=111 Identities=15% Similarity=0.156 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.+++|++.+++.+++++++|+.++.. .+..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 111 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA---------AGTT 111 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH---------HCCS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh---------hccC
Confidence 57889999999999999987773 456899999999999999999999999889999999987631 1235
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccc--cccCCcEEEEEecC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIP--LLKKDGILVYCTCS 238 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~--lLkpgG~lvysTCS 238 (397)
++||+|++|||+... .... .+++.. +.+ +|||||++++.+.+
T Consensus 112 ~~fD~i~~~~p~~~~---------------~~~~-------~~~l~~-----------~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 112 SPVDLVLADPPYNVD---------------SADV-------DAILAA-----------LGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SCCSEEEECCCTTSC---------------HHHH-------HHHHHH-----------HHHSSSCCTTCEEEEEEET
T ss_pred CCccEEEECCCCCcc---------------hhhH-------HHHHHH-----------HHhcCccCCCeEEEEEecC
Confidence 789999999994220 1111 445555 666 99999999998665
No 40
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.50 E-value=1.3e-13 Score=129.07 Aligned_cols=131 Identities=17% Similarity=0.246 Sum_probs=102.9
Q ss_pred chhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEccccccc
Q psy17793 71 NLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRIN 149 (397)
Q Consensus 71 d~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~ 149 (397)
......+...+++.++.+|||+|||+|..+.+++..+++.++|+++|+++.+++.++++++.+|+.+ +++...|+...
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 3444566667888999999999999999999999987777899999999999999999999999987 99999999754
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
+..++||.|++|+|+. ..++++ +.++||||
T Consensus 158 -----------~~~~~~D~v~~~~~~~----------------------------~~~l~~-----------~~~~L~~g 187 (255)
T 3mb5_A 158 -----------IEEENVDHVILDLPQP----------------------------ERVVEH-----------AAKALKPG 187 (255)
T ss_dssp -----------CCCCSEEEEEECSSCG----------------------------GGGHHH-----------HHHHEEEE
T ss_pred -----------cCCCCcCEEEECCCCH----------------------------HHHHHH-----------HHHHcCCC
Confidence 2456799999999821 234555 88899999
Q ss_pred cEEEEEecCCCccccHHHHHHHHHHC
Q psy17793 230 GILVYCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 230 G~lvysTCS~~~eEnE~vV~~~L~~~ 255 (397)
|+++..+-+ . +..+.+...++++
T Consensus 188 G~l~~~~~~--~-~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 188 GFFVAYTPC--S-NQVMRLHEKLREF 210 (255)
T ss_dssp EEEEEEESS--H-HHHHHHHHHHHHT
T ss_pred CEEEEEECC--H-HHHHHHHHHHHHc
Confidence 999876322 2 2333444556655
No 41
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=4.7e-14 Score=133.72 Aligned_cols=141 Identities=13% Similarity=0.217 Sum_probs=98.8
Q ss_pred hhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH---hCCC-cEEEEEccccc
Q psy17793 72 LPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKK---LQLS-SIQTHVYDSTR 147 (397)
Q Consensus 72 ~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~---~g~~-~v~~~~~D~~~ 147 (397)
..+.+++.++...++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++|++. +++. +++++++|+..
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 456777888888889999999999999999999975 457999999999999999999998 8886 49999999987
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCC-C-CcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFG-Q-RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPL 225 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G-~-~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~l 225 (397)
.... .....+..++||+|++|||+...+ . .++...... ..........+++. +.++
T Consensus 102 ~~~~----~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a-------~~~~~~~~~~~l~~-----------~~~~ 159 (260)
T 2ozv_A 102 RAKA----RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEA-------HAMTEGLFEDWIRT-----------ASAI 159 (260)
T ss_dssp CHHH----HHHTTCCTTCEEEEEECCCC----------------------------CCHHHHHHH-----------HHHH
T ss_pred Hhhh----hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHH-------hhcCcCCHHHHHHH-----------HHHH
Confidence 6210 000013456899999999987653 1 111110000 00000112567888 9999
Q ss_pred ccCCcEEEEE
Q psy17793 226 LKKDGILVYC 235 (397)
Q Consensus 226 LkpgG~lvys 235 (397)
|||||++++.
T Consensus 160 LkpgG~l~~~ 169 (260)
T 2ozv_A 160 MVSGGQLSLI 169 (260)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCCEEEEE
Confidence 9999999885
No 42
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=1.3e-13 Score=132.78 Aligned_cols=154 Identities=12% Similarity=0.056 Sum_probs=105.2
Q ss_pred CCcEEEechhHHHHHhccC---CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EE
Q psy17793 64 SSMGILQNLPSILAGHYLD---VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQ 139 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~---~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~ 139 (397)
.+.++....+..++..+++ ..++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++|++++|+.+ ++
T Consensus 99 ~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~ 176 (284)
T 1nv8_A 99 EGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFF 176 (284)
T ss_dssp TTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEE
T ss_pred CCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceE
Confidence 4444444445454444432 346789999999999999999987 56799999999999999999999999986 99
Q ss_pred EEEcccccccccchhhHHHhhhcccCc---cEEEEcCCCCCCCC--CcccccccCccchHHHHHHHHHHHHHHHHHHhhh
Q psy17793 140 THVYDSTRINTSSQIDIERMKLQKESF---DRILLDAPCSGFGQ--RPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRF 214 (397)
Q Consensus 140 ~~~~D~~~~~~~~~~d~~~~~~~~~~f---D~Il~DpPCSg~G~--~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f 214 (397)
++.+|+.... . ++| |+|++||||.+.+. .++.. ... ...+..- .-...++++
T Consensus 177 ~~~~D~~~~~------------~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep----~~al~~~-~dgl~~~~~---- 233 (284)
T 1nv8_A 177 VRKGEFLEPF------------K-EKFASIEMILSNPPYVKSSAHLPKDVL-FEP----PEALFGG-EDGLDFYRE---- 233 (284)
T ss_dssp EEESSTTGGG------------G-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSC----HHHHBCT-TTSCHHHHH----
T ss_pred EEECcchhhc------------c-cccCCCCEEEEcCCCCCcccccChhhc-cCc----HHHhcCC-CcHHHHHHH----
Confidence 9999997642 1 367 99999999998653 23332 111 1111000 000245566
Q ss_pred hcccccccc-ccccCCcEEEEEecCCCccccHHHHHHHHH
Q psy17793 215 VSLFDWQGI-PLLKKDGILVYCTCSLSVEENEAVIAWILH 253 (397)
Q Consensus 215 ~~~~~~~a~-~lLkpgG~lvysTCS~~~eEnE~vV~~~L~ 253 (397)
+. +.|+|||.+++. +...+.+++ ..+++
T Consensus 234 -------i~~~~l~pgG~l~~e---~~~~q~~~v-~~~~~ 262 (284)
T 1nv8_A 234 -------FFGRYDTSGKIVLME---IGEDQVEEL-KKIVS 262 (284)
T ss_dssp -------HHHHCCCTTCEEEEE---CCTTCHHHH-TTTST
T ss_pred -------HHHhcCCCCCEEEEE---ECchHHHHH-HHHHH
Confidence 77 889999999974 444444543 33443
No 43
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.48 E-value=1e-13 Score=128.50 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=96.8
Q ss_pred EechhHHHHHhcc---CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEEc
Q psy17793 69 LQNLPSILAGHYL---DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS--SIQTHVY 143 (397)
Q Consensus 69 ~Qd~~S~l~~~~L---~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~--~v~~~~~ 143 (397)
++.....++..++ .++++.+|||+|||+|..|..+|..++++++|+++|+|+.+++.+++++++.|+. +|+++.+
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 3444444444443 3444559999999999999999998776789999999999999999999999987 6999999
Q ss_pred ccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy17793 144 DSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI 223 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~ 223 (397)
|+...... +..++||+|++|++. ... ..+++. +.
T Consensus 117 da~~~l~~---------~~~~~fD~V~~d~~~-------------------~~~-------~~~l~~-----------~~ 150 (221)
T 3dr5_A 117 RPLDVMSR---------LANDSYQLVFGQVSP-------------------MDL-------KALVDA-----------AW 150 (221)
T ss_dssp CHHHHGGG---------SCTTCEEEEEECCCT-------------------TTH-------HHHHHH-----------HH
T ss_pred CHHHHHHH---------hcCCCcCeEEEcCcH-------------------HHH-------HHHHHH-----------HH
Confidence 98776421 225789999999861 111 335666 88
Q ss_pred ccccCCcEEEEEecCC
Q psy17793 224 PLLKKDGILVYCTCSL 239 (397)
Q Consensus 224 ~lLkpgG~lvysTCS~ 239 (397)
++|||||.|++..+.+
T Consensus 151 ~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 151 PLLRRGGALVLADALL 166 (221)
T ss_dssp HHEEEEEEEEETTTTG
T ss_pred HHcCCCcEEEEeCCCC
Confidence 9999999999987654
No 44
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.48 E-value=8.9e-13 Score=125.45 Aligned_cols=135 Identities=17% Similarity=0.215 Sum_probs=104.4
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccch
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQ 153 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~ 153 (397)
..+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++|++++++ +++++...|+....
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 177 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF---- 177 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC----
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc----
Confidence 3445567888999999999999999999999876678999999999999999999999998 57999999987652
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
..+.||+|++|+|+. .++|.+ +.++|||||+++
T Consensus 178 --------~~~~~D~V~~~~~~~----------------------------~~~l~~-----------~~~~L~pgG~l~ 210 (277)
T 1o54_A 178 --------DEKDVDALFLDVPDP----------------------------WNYIDK-----------CWEALKGGGRFA 210 (277)
T ss_dssp --------SCCSEEEEEECCSCG----------------------------GGTHHH-----------HHHHEEEEEEEE
T ss_pred --------cCCccCEEEECCcCH----------------------------HHHHHH-----------HHHHcCCCCEEE
Confidence 345799999999831 234555 788899999999
Q ss_pred EEecCCCccccHHHHHHHHHHCCCcEEEecC
Q psy17793 234 YCTCSLSVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 234 ysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
+.+++. +....+...+++. ++..+...
T Consensus 211 ~~~~~~---~~~~~~~~~l~~~-gf~~~~~~ 237 (277)
T 1o54_A 211 TVCPTT---NQVQETLKKLQEL-PFIRIEVW 237 (277)
T ss_dssp EEESSH---HHHHHHHHHHHHS-SEEEEEEE
T ss_pred EEeCCH---HHHHHHHHHHHHC-CCceeEEE
Confidence 987653 2222344455554 56655543
No 45
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.48 E-value=6.3e-13 Score=132.53 Aligned_cols=153 Identities=13% Similarity=0.124 Sum_probs=110.6
Q ss_pred cCCCcEEEechhHHHHHhcc-CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYL-DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQT 140 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L-~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~ 140 (397)
+..++...|+..+.++.... ...+|.+|||+| |+|..+..++.. +..++|+++|+|+.+++.+++|++++|+.+|++
T Consensus 148 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~ 225 (373)
T 2qm3_A 148 FDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEI 225 (373)
T ss_dssp GTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred cCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEE
Confidence 34455555666555543322 234688999999 999999988775 344799999999999999999999999988999
Q ss_pred EEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy17793 141 HVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDW 220 (397)
Q Consensus 141 ~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~ 220 (397)
+.+|+...... ...++||+|++||||+. .. . ..+|++
T Consensus 226 ~~~D~~~~l~~---------~~~~~fD~Vi~~~p~~~-----------------~~------~-~~~l~~---------- 262 (373)
T 2qm3_A 226 FTFDLRKPLPD---------YALHKFDTFITDPPETL-----------------EA------I-RAFVGR---------- 262 (373)
T ss_dssp ECCCTTSCCCT---------TTSSCBSEEEECCCSSH-----------------HH------H-HHHHHH----------
T ss_pred EEChhhhhchh---------hccCCccEEEECCCCch-----------------HH------H-HHHHHH----------
Confidence 99999873210 12357999999999642 21 1 677888
Q ss_pred cccccccCCc-EEEEEecCCCccccH---HHHHHHHH-HCCCcEEEec
Q psy17793 221 QGIPLLKKDG-ILVYCTCSLSVEENE---AVIAWILH-RHPEVELVQT 263 (397)
Q Consensus 221 ~a~~lLkpgG-~lvysTCS~~~eEnE---~vV~~~L~-~~~~~~l~~~ 263 (397)
+.++||||| .++|++|+ .+++. +.+..+++ +. ++....+
T Consensus 263 -~~~~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~-g~~~~~~ 306 (373)
T 2qm3_A 263 -GIATLKGPRCAGYFGITR--RESSLDKWREIQKLLLNEF-NVVITDI 306 (373)
T ss_dssp -HHHTBCSTTCEEEEEECT--TTCCHHHHHHHHHHHHHTS-CCEEEEE
T ss_pred -HHHHcccCCeEEEEEEec--CcCCHHHHHHHHHHHHHhc-Ccchhhh
Confidence 999999999 55888776 23444 45667776 55 4554433
No 46
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.47 E-value=6.7e-13 Score=120.10 Aligned_cols=133 Identities=17% Similarity=0.106 Sum_probs=103.5
Q ss_pred HHHHhccC--CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc
Q psy17793 75 ILAGHYLD--VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS 152 (397)
Q Consensus 75 ~l~~~~L~--~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~ 152 (397)
......+. +.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++..++.++++...|+...
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---- 121 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD---- 121 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT----
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc----
Confidence 33334444 567899999999999999998874 4569999999999999999999999998899999998764
Q ss_pred hhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEE
Q psy17793 153 QIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGIL 232 (397)
Q Consensus 153 ~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~l 232 (397)
..++||+|+++++ ...+ .+++++ +.++|||||++
T Consensus 122 ---------~~~~fD~i~~~~~-------------------~~~~-------~~~l~~-----------~~~~L~~gG~l 155 (205)
T 3grz_A 122 ---------VDGKFDLIVANIL-------------------AEIL-------LDLIPQ-----------LDSHLNEDGQV 155 (205)
T ss_dssp ---------CCSCEEEEEEESC-------------------HHHH-------HHHGGG-----------SGGGEEEEEEE
T ss_pred ---------CCCCceEEEECCc-------------------HHHH-------HHHHHH-----------HHHhcCCCCEE
Confidence 2468999999886 2221 456777 99999999999
Q ss_pred EEEecCCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 233 VYCTCSLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 233 vysTCS~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
++++.. .+..+.+...+++. +++.+..
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~-Gf~~~~~ 182 (205)
T 3grz_A 156 IFSGID---YLQLPKIEQALAEN-SFQIDLK 182 (205)
T ss_dssp EEEEEE---GGGHHHHHHHHHHT-TEEEEEE
T ss_pred EEEecC---cccHHHHHHHHHHc-CCceEEe
Confidence 997543 33455666777776 5776654
No 47
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=1.1e-13 Score=132.09 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=88.7
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
+..+.++++|||+|||+|..+..+|... +.++|+|+|+++.+++.+++|++.+|++++.++.+|+... .
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~--------- 182 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-E--------- 182 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-C---------
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-C---------
Confidence 3446789999999999999999999874 3569999999999999999999999999999999999865 1
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
. .++||+|++|||. . . .+++.. +.+.|||||+++++ |..
T Consensus 183 -~-~~~~D~Vi~d~p~-------------~---~-----------~~~l~~-----------~~~~LkpgG~l~~s-~~~ 221 (272)
T 3a27_A 183 -L-KDVADRVIMGYVH-------------K---T-----------HKFLDK-----------TFEFLKDRGVIHYH-ETV 221 (272)
T ss_dssp -C-TTCEEEEEECCCS-------------S---G-----------GGGHHH-----------HHHHEEEEEEEEEE-EEE
T ss_pred -c-cCCceEEEECCcc-------------c---H-----------HHHHHH-----------HHHHcCCCCEEEEE-EcC
Confidence 1 3579999999993 0 1 234555 78889999988755 543
Q ss_pred C
Q psy17793 240 S 240 (397)
Q Consensus 240 ~ 240 (397)
.
T Consensus 222 ~ 222 (272)
T 3a27_A 222 A 222 (272)
T ss_dssp E
T ss_pred c
Confidence 3
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=5e-13 Score=118.40 Aligned_cols=140 Identities=16% Similarity=0.196 Sum_probs=104.7
Q ss_pred hhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEEEccccccc
Q psy17793 72 LPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS--IQTHVYDSTRIN 149 (397)
Q Consensus 72 ~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~--v~~~~~D~~~~~ 149 (397)
..+..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..++.+ +++...|+....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 45555666777788999999999999999988875 5799999999999999999999999987 999999987642
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
..++||+|++|+|... . ... ...+++. +.++||||
T Consensus 116 ------------~~~~~D~v~~~~~~~~-----------~----~~~-------~~~~l~~-----------~~~~L~~g 150 (194)
T 1dus_A 116 ------------KDRKYNKIITNPPIRA-----------G----KEV-------LHRIIEE-----------GKELLKDN 150 (194)
T ss_dssp ------------TTSCEEEEEECCCSTT-----------C----HHH-------HHHHHHH-----------HHHHEEEE
T ss_pred ------------ccCCceEEEECCCccc-----------c----hhH-------HHHHHHH-----------HHHHcCCC
Confidence 3468999999988321 1 111 2556777 88999999
Q ss_pred cEEEEEecCCCccccHHHHHHHHHHCCCcEEE
Q psy17793 230 GILVYCTCSLSVEENEAVIAWILHRHPEVELV 261 (397)
Q Consensus 230 G~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~ 261 (397)
|.+++++.+. ...++..+.+-+.+.+++..
T Consensus 151 G~l~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 151 GEIWVVIQTK--QGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp EEEEEEEEST--HHHHHHHHHHHHHHSCCEEE
T ss_pred CEEEEEECCC--CChHHHHHHHHHHhcceEEE
Confidence 9999987653 23333444443444344443
No 49
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.46 E-value=3.7e-13 Score=118.32 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=100.5
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccch
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQ 153 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~ 153 (397)
..+...+.+.++++|||+|||+|..+.+++... +..+|+++|+|+.+++.++++++++|+. ++ ++..|+....
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~---- 88 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF---- 88 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG----
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh----
Confidence 344456678899999999999999999998865 4689999999999999999999999987 78 8888875432
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
+...++||+|+++.+. .. .+++++ +.++|||||+++
T Consensus 89 ------~~~~~~~D~i~~~~~~------------------~~---------~~~l~~-----------~~~~L~~gG~l~ 124 (178)
T 3hm2_A 89 ------DDVPDNPDVIFIGGGL------------------TA---------PGVFAA-----------AWKRLPVGGRLV 124 (178)
T ss_dssp ------GGCCSCCSEEEECC-T------------------TC---------TTHHHH-----------HHHTCCTTCEEE
T ss_pred ------hccCCCCCEEEECCcc------------------cH---------HHHHHH-----------HHHhcCCCCEEE
Confidence 1122689999986541 00 345666 888999999999
Q ss_pred EEecCCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 234 YCTCSLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 234 ysTCS~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
+++++. ++......+++++. .++..
T Consensus 125 ~~~~~~---~~~~~~~~~~~~~~-~~~~~ 149 (178)
T 3hm2_A 125 ANAVTV---ESEQMLWALRKQFG-GTISS 149 (178)
T ss_dssp EEECSH---HHHHHHHHHHHHHC-CEEEE
T ss_pred EEeecc---ccHHHHHHHHHHcC-CeeEE
Confidence 987653 44555666666663 44443
No 50
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=2.3e-13 Score=123.78 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=86.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEEcccccccccchhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL--SSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~--~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
++.+|||+|||+|..+..++.. ...+|+|+|+|+.+++.+++|++.+|+ ++++++++|+..+... ..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~---------~~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ---------PQ 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS---------CC
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh---------hc
Confidence 6789999999999999987764 346899999999999999999999998 6899999998765311 12
Q ss_pred ccC-ccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccc--cccccCCcEEEEEecCC
Q psy17793 163 KES-FDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQG--IPLLKKDGILVYCTCSL 239 (397)
Q Consensus 163 ~~~-fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a--~~lLkpgG~lvysTCS~ 239 (397)
.++ ||+|++|||+. . . . . .++++. + .++|||||.+++++|+.
T Consensus 122 ~~~~fD~I~~~~~~~-~----------~-----~-~-------~~~l~~-----------~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F----------N-----L-A-------EQAISL-----------LCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp SSCCEEEEEECCCSS-S----------C-----H-H-------HHHHHH-----------HHHTTCEEEEEEEEEEEESS
T ss_pred cCCCCCEEEECCCCC-C----------c-----c-H-------HHHHHH-----------HHhcCccCCCcEEEEEECCC
Confidence 467 99999999942 1 0 0 0 233444 4 67899999999998875
Q ss_pred C
Q psy17793 240 S 240 (397)
Q Consensus 240 ~ 240 (397)
.
T Consensus 167 ~ 167 (201)
T 2ift_A 167 K 167 (201)
T ss_dssp S
T ss_pred C
Confidence 5
No 51
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.45 E-value=4.5e-13 Score=125.14 Aligned_cols=130 Identities=20% Similarity=0.182 Sum_probs=100.0
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+..+|..+.+.++|+++|+|+.+++.+++++++.|+. +|+++.+|+..
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 45555666666666667789999999999999999998866789999999999999999999999986 49999999876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
.... .....+..++||.|++|+++. . ...+++. +.++||
T Consensus 134 ~l~~----l~~~~~~~~~fD~I~~d~~~~-------------------~-------~~~~l~~-----------~~~~L~ 172 (237)
T 3c3y_A 134 ALDN----LLQGQESEGSYDFGFVDADKP-------------------N-------YIKYHER-----------LMKLVK 172 (237)
T ss_dssp HHHH----HHHSTTCTTCEEEEEECSCGG-------------------G-------HHHHHHH-----------HHHHEE
T ss_pred HHHH----HHhccCCCCCcCEEEECCchH-------------------H-------HHHHHHH-----------HHHhcC
Confidence 5311 000000146899999998621 1 1455666 888999
Q ss_pred CCcEEEEEecCC
Q psy17793 228 KDGILVYCTCSL 239 (397)
Q Consensus 228 pgG~lvysTCS~ 239 (397)
|||.|++.+|.+
T Consensus 173 pGG~lv~d~~~~ 184 (237)
T 3c3y_A 173 VGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEEEECTTG
T ss_pred CCeEEEEecCCc
Confidence 999999998754
No 52
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.45 E-value=3.6e-13 Score=122.07 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=92.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.++|.+|||+|||||++|..+++. .++|+|+|+++.. .+.+++++.+|++..... +.-...+.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~---~~~~~~~~ 85 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIF---DDIDRALR 85 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHH---HHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCHHHH---HHHHHHhh
Confidence 468999999999999999999885 6899999999852 346799999998765211 00000011
Q ss_pred ---ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 163 ---KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 163 ---~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
.++||+|++|+++..+|.. . .+......++..+|+. +.++|||||.++..+
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~-------~-----~d~~~~~~l~~~~l~~-----------a~~~LkpGG~lv~k~--- 139 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIP-------S-----RDHAVSYQIGQRVMEI-----------AVRYLRNGGNVLLKQ--- 139 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCH-------H-----HHHHHHHHHHHHHHHH-----------HHHHEEEEEEEEEEE---
T ss_pred cccCCcceEEecCCCcCCCCCc-------c-----cCHHHHHHHHHHHHHH-----------HHHHccCCCEEEEEE---
Confidence 1489999999987666531 1 1122223455777777 999999999999763
Q ss_pred CccccHHHHHHHHHHCCCcEEEe
Q psy17793 240 SVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 240 ~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
...++...+.+.++.+ |..+.
T Consensus 140 ~~~~~~~~~~~~l~~~--F~~v~ 160 (191)
T 3dou_A 140 FQGDMTNDFIAIWRKN--FSSYK 160 (191)
T ss_dssp ECSTHHHHHHHHHGGG--EEEEE
T ss_pred cCCCCHHHHHHHHHHh--cCEEE
Confidence 3344555566666554 44443
No 53
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.45 E-value=4.8e-13 Score=121.83 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=107.0
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...+.+.++.+|||+|||+|..+..++...++..+|+++|+|+.+++.++++++..++.++++...|+..+.
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------- 101 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP------- 101 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-------
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-------
Confidence 3345677889999999999999999999986556799999999999999999999999989999999997753
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+..++||+|++.-. ..... . ...+|++ +.++|||||++++++
T Consensus 102 ----~~~~~fD~v~~~~~----------l~~~~---------~----~~~~l~~-----------~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 102 ----LPDNTVDFIFMAFT----------FHELS---------E----PLKFLEE-----------LKRVAKPFAYLAIID 143 (219)
T ss_dssp ----SCSSCEEEEEEESC----------GGGCS---------S----HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ----CCCCCeeEEEeehh----------hhhcC---------C----HHHHHHH-----------HHHHhCCCeEEEEEE
Confidence 34578999998432 11111 0 1567777 889999999999987
Q ss_pred cCCCcc---------ccHHHHHHHHHHCCCcEEEe
Q psy17793 237 CSLSVE---------ENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 237 CS~~~e---------EnE~vV~~~L~~~~~~~l~~ 262 (397)
+..... -+.+.+..++++. +++.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 177 (219)
T 3dh0_A 144 WKKEERDKGPPPEEVYSEWEVGLILEDA-GIRVGR 177 (219)
T ss_dssp ECSSCCSSSCCGGGSCCHHHHHHHHHHT-TCEEEE
T ss_pred ecccccccCCchhcccCHHHHHHHHHHC-CCEEEE
Confidence 653322 2345666677776 466554
No 54
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.44 E-value=5.6e-13 Score=122.23 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=98.2
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+.++|..+++.++|+++|+++.+++.+++++++.|+.+ ++++.+|+..
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 445556666666666678899999999999999999987657899999999999999999999999975 9999999865
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
.... .......++||+|++|++. ... ..+++. +.++||
T Consensus 128 ~~~~-----~~~~~~~~~fD~v~~~~~~-------------------~~~-------~~~l~~-----------~~~~L~ 165 (225)
T 3tr6_A 128 TLAE-----LIHAGQAWQYDLIYIDADK-------------------ANT-------DLYYEE-----------SLKLLR 165 (225)
T ss_dssp HHHH-----HHTTTCTTCEEEEEECSCG-------------------GGH-------HHHHHH-----------HHHHEE
T ss_pred HHHH-----hhhccCCCCccEEEECCCH-------------------HHH-------HHHHHH-----------HHHhcC
Confidence 4211 0000011689999999871 111 345666 889999
Q ss_pred CCcEEEEEecC
Q psy17793 228 KDGILVYCTCS 238 (397)
Q Consensus 228 pgG~lvysTCS 238 (397)
|||+|++....
T Consensus 166 pgG~lv~~~~~ 176 (225)
T 3tr6_A 166 EGGLIAVDNVL 176 (225)
T ss_dssp EEEEEEEECSS
T ss_pred CCcEEEEeCCC
Confidence 99999987654
No 55
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.44 E-value=2.3e-13 Score=135.54 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=69.5
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH----
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI---- 156 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~---- 156 (397)
++.. +++|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.+++|++.+|+++++++.+|+..+........
T Consensus 210 ~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~ 285 (369)
T 3bt7_A 210 TKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNR 285 (369)
T ss_dssp TTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTT
T ss_pred hhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccc
Confidence 4433 678999999999999988873 46999999999999999999999999999999999976531100000
Q ss_pred -HHhhhcccCccEEEEcCCCCC
Q psy17793 157 -ERMKLQKESFDRILLDAPCSG 177 (397)
Q Consensus 157 -~~~~~~~~~fD~Il~DpPCSg 177 (397)
........+||+|++|||++|
T Consensus 286 l~~~~~~~~~fD~Vv~dPPr~g 307 (369)
T 3bt7_A 286 LQGIDLKSYQCETIFVDPPRSG 307 (369)
T ss_dssp GGGSCGGGCCEEEEEECCCTTC
T ss_pred ccccccccCCCCEEEECcCccc
Confidence 000000137999999999764
No 56
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=8.8e-13 Score=123.13 Aligned_cols=135 Identities=19% Similarity=0.270 Sum_probs=102.6
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEEcccccccccch
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-QLSSIQTHVYDSTRINTSSQ 153 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-g~~~v~~~~~D~~~~~~~~~ 153 (397)
..+...+++.++++|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+ |..++++...|+....
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---- 161 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE---- 161 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC----
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----
Confidence 44556678889999999999999999999998766789999999999999999999998 8778999999987651
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
+..+.||+|++|+|. . .++|++ +.++|||||+++
T Consensus 162 -------~~~~~~D~v~~~~~~-----------------~-----------~~~l~~-----------~~~~L~~gG~l~ 195 (258)
T 2pwy_A 162 -------LEEAAYDGVALDLME-----------------P-----------WKVLEK-----------AALALKPDRFLV 195 (258)
T ss_dssp -------CCTTCEEEEEEESSC-----------------G-----------GGGHHH-----------HHHHEEEEEEEE
T ss_pred -------CCCCCcCEEEECCcC-----------------H-----------HHHHHH-----------HHHhCCCCCEEE
Confidence 234679999999871 1 234555 788999999999
Q ss_pred EEecCCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 234 YCTCSLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 234 ysTCS~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+.+.+. +..+ .+...+++. ++..+..
T Consensus 196 ~~~~~~--~~~~-~~~~~l~~~-gf~~~~~ 221 (258)
T 2pwy_A 196 AYLPNI--TQVL-ELVRAAEAH-PFRLERV 221 (258)
T ss_dssp EEESCH--HHHH-HHHHHHTTT-TEEEEEE
T ss_pred EEeCCH--HHHH-HHHHHHHHC-CCceEEE
Confidence 876442 2222 233334443 5655443
No 57
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.43 E-value=6.3e-13 Score=123.57 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=99.6
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
-|++++..+...+++.++.+|||+|||+|..+..++... .+|+++|+|+.+++.++++++..|+.++.+..+|+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 477888889999999999999999999999999888753 59999999999999999999999998999999998765
Q ss_pred cccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Q psy17793 149 NTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK 228 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp 228 (397)
. +..++||+|++.-. ...+. +. ..+|.+ +.++|||
T Consensus 82 ~-----------~~~~~fD~v~~~~~----------l~~~~--~~-----------~~~l~~-----------~~~~Lkp 116 (239)
T 1xxl_A 82 P-----------FPDDSFDIITCRYA----------AHHFS--DV-----------RKAVRE-----------VARVLKQ 116 (239)
T ss_dssp C-----------SCTTCEEEEEEESC----------GGGCS--CH-----------HHHHHH-----------HHHHEEE
T ss_pred C-----------CCCCcEEEEEECCc----------hhhcc--CH-----------HHHHHH-----------HHHHcCC
Confidence 3 34578999998422 11111 11 456777 8899999
Q ss_pred CcEEEEEecC
Q psy17793 229 DGILVYCTCS 238 (397)
Q Consensus 229 gG~lvysTCS 238 (397)
||++++++..
T Consensus 117 gG~l~~~~~~ 126 (239)
T 1xxl_A 117 DGRFLLVDHY 126 (239)
T ss_dssp EEEEEEEEEC
T ss_pred CcEEEEEEcC
Confidence 9999997654
No 58
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.43 E-value=4.5e-13 Score=131.82 Aligned_cols=101 Identities=19% Similarity=0.304 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.+|++|||+|||+|..+.. |. +..+|+|+|+|+.+++.+++|++.+|+ .+++++++|+..+ .
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~-------------~ 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV-------------D 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-------------C
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh-------------c
Confidence 5789999999999999988 66 467999999999999999999999998 5799999999865 2
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
+.||+|++|||.++ .+++.. +.++|+|||.+++++|+..
T Consensus 257 -~~fD~Vi~dpP~~~---------------------------~~~l~~-----------~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 -VKGNRVIMNLPKFA---------------------------HKFIDK-----------ALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -CCEEEEEECCTTTG---------------------------GGGHHH-----------HHHHEEEEEEEEEEEEESS
T ss_pred -CCCcEEEECCcHhH---------------------------HHHHHH-----------HHHHcCCCCEEEEEEeecC
Confidence 57999999999432 144555 8889999999999999876
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.42 E-value=4.8e-12 Score=115.57 Aligned_cols=141 Identities=12% Similarity=0.132 Sum_probs=100.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..+|... +...|+|+|+|+.+++.+++++++.|+.++.++.+|+..+.. .+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 109 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD---------YFED 109 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG---------TSCT
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh---------hcCC
Confidence 467899999999999999999875 467999999999999999999999999899999999987521 1345
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccc
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEE 243 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eE 243 (397)
++||.|++++|. |....... ... + .+..+|+. +.++|||||.++++|-. .+
T Consensus 110 ~~~D~i~~~~~~------~~~~~~~~----~~~---~--~~~~~l~~-----------~~~~LkpgG~l~~~~~~---~~ 160 (214)
T 1yzh_A 110 GEIDRLYLNFSD------PWPKKRHE----KRR---L--TYKTFLDT-----------FKRILPENGEIHFKTDN---RG 160 (214)
T ss_dssp TCCSEEEEESCC------CCCSGGGG----GGS---T--TSHHHHHH-----------HHHHSCTTCEEEEEESC---HH
T ss_pred CCCCEEEEECCC------Cccccchh----hhc---c--CCHHHHHH-----------HHHHcCCCcEEEEEeCC---HH
Confidence 689999999872 11110000 000 0 13567777 88999999999987532 11
Q ss_pred cHHHHHHHHHHCCCcEEEecC
Q psy17793 244 NEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 244 nE~vV~~~L~~~~~~~l~~~~ 264 (397)
.-+.+...++++ +++.+.+.
T Consensus 161 ~~~~~~~~~~~~-g~~~~~~~ 180 (214)
T 1yzh_A 161 LFEYSLVSFSQY-GMKLNGVW 180 (214)
T ss_dssp HHHHHHHHHHHH-TCEEEEEE
T ss_pred HHHHHHHHHHHC-CCeeeecc
Confidence 222334445555 47666544
No 60
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.41 E-value=7e-13 Score=120.69 Aligned_cols=109 Identities=10% Similarity=0.099 Sum_probs=85.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++.. ...+|+|+|+|+.+++.+++|++.+++.+++++++|+..... ...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~----------~~~~ 121 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA----------QKGT 121 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS----------SCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh----------hcCC
Confidence 6789999999999999987774 345999999999999999999999999889999999876421 2346
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccc--cccccCCcEEEEEecCCC
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQG--IPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a--~~lLkpgG~lvysTCS~~ 240 (397)
+||+|++|||+.. + . . .++++. . .++|||||++++++|+..
T Consensus 122 ~fD~V~~~~p~~~-~---------~---~-----------~~~l~~-----------l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 122 PHNIVFVDPPFRR-G---------L---L-----------EETINL-----------LEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp CEEEEEECCSSST-T---------T---H-----------HHHHHH-----------HHHTTCEEEEEEEEEEEEGGG
T ss_pred CCCEEEECCCCCC-C---------c---H-----------HHHHHH-----------HHhcCccCCCcEEEEEECCCc
Confidence 8999999999421 0 0 1 122333 3 357999999999988643
No 61
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.41 E-value=8.9e-13 Score=122.46 Aligned_cols=127 Identities=15% Similarity=0.264 Sum_probs=100.3
Q ss_pred CcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEc
Q psy17793 65 SMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVY 143 (397)
Q Consensus 65 g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~ 143 (397)
+.-.++.....++..++...++.+|||+|||+|..+..+|... +.++|+++|+++.+++.+++++++.|+. +|+++.+
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG 129 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 3334566666777777777788999999999999999999853 4689999999999999999999999986 7999999
Q ss_pred ccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy17793 144 DSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI 223 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~ 223 (397)
|+..... ....++||+|++|+++.. . ..+++. +.
T Consensus 130 d~~~~~~---------~~~~~~fD~V~~~~~~~~---------------~-----------~~~l~~-----------~~ 163 (232)
T 3ntv_A 130 NALEQFE---------NVNDKVYDMIFIDAAKAQ---------------S-----------KKFFEI-----------YT 163 (232)
T ss_dssp CGGGCHH---------HHTTSCEEEEEEETTSSS---------------H-----------HHHHHH-----------HG
T ss_pred CHHHHHH---------hhccCCccEEEEcCcHHH---------------H-----------HHHHHH-----------HH
Confidence 9977531 012478999999986321 1 446677 89
Q ss_pred ccccCCcEEEEEecC
Q psy17793 224 PLLKKDGILVYCTCS 238 (397)
Q Consensus 224 ~lLkpgG~lvysTCS 238 (397)
++|||||+|++...-
T Consensus 164 ~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 164 PLLKHQGLVITDNVL 178 (232)
T ss_dssp GGEEEEEEEEEECTT
T ss_pred HhcCCCeEEEEeeCC
Confidence 999999999986443
No 62
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=1.2e-12 Score=124.24 Aligned_cols=118 Identities=20% Similarity=0.236 Sum_probs=96.1
Q ss_pred chhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-C--CCcEEEEEccccc
Q psy17793 71 NLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-Q--LSSIQTHVYDSTR 147 (397)
Q Consensus 71 d~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-g--~~~v~~~~~D~~~ 147 (397)
......+...+++.++++|||+|||+|..+.+++..+++.++|+++|+++.+++.++++++.. | ..++++...|+..
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 334445556778899999999999999999999997766789999999999999999999998 7 6789999999876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
.. +..+.||+|++|+|. . .++|++ +.++||
T Consensus 165 ~~-----------~~~~~~D~v~~~~~~-----------------~-----------~~~l~~-----------~~~~L~ 194 (280)
T 1i9g_A 165 SE-----------LPDGSVDRAVLDMLA-----------------P-----------WEVLDA-----------VSRLLV 194 (280)
T ss_dssp CC-----------CCTTCEEEEEEESSC-----------------G-----------GGGHHH-----------HHHHEE
T ss_pred cC-----------CCCCceeEEEECCcC-----------------H-----------HHHHHH-----------HHHhCC
Confidence 52 234679999998871 1 134556 888999
Q ss_pred CCcEEEEEecC
Q psy17793 228 KDGILVYCTCS 238 (397)
Q Consensus 228 pgG~lvysTCS 238 (397)
|||++++++.+
T Consensus 195 pgG~l~~~~~~ 205 (280)
T 1i9g_A 195 AGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEEEESS
T ss_pred CCCEEEEEeCC
Confidence 99999998654
No 63
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.40 E-value=1.4e-12 Score=115.07 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
..++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++.+++. +++++.+|+.... +.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------~~ 96 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI----------DC 96 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH----------HH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH----------Hh
Confidence 567889999999999999998885 4579999999999999999999999985 6999999987642 12
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc--ccccCCcEEEEEecCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI--PLLKKDGILVYCTCSL 239 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~--~lLkpgG~lvysTCS~ 239 (397)
..+.||+|++|||+. .... .++++. .. ++|||||.+++++++-
T Consensus 97 ~~~~fD~i~~~~~~~-----------------~~~~-------~~~~~~-----------l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 97 LTGRFDLVFLDPPYA-----------------KETI-------VATIEA-----------LAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp BCSCEEEEEECCSSH-----------------HHHH-------HHHHHH-----------HHHTTCEEEEEEEEEEEETT
T ss_pred hcCCCCEEEECCCCC-----------------cchH-------HHHHHH-----------HHhCCCcCCCcEEEEEECCc
Confidence 335799999999831 0111 233333 33 8899999999987764
Q ss_pred C
Q psy17793 240 S 240 (397)
Q Consensus 240 ~ 240 (397)
.
T Consensus 142 ~ 142 (177)
T 2esr_A 142 V 142 (177)
T ss_dssp C
T ss_pred c
Confidence 3
No 64
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.40 E-value=9.9e-13 Score=127.26 Aligned_cols=116 Identities=12% Similarity=0.138 Sum_probs=93.3
Q ss_pred HHHhccC-CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccch
Q psy17793 76 LAGHYLD-VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQ 153 (397)
Q Consensus 76 l~~~~L~-~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~ 153 (397)
.+...+. +.++.+|||+|||+|..+..++... +.+|+|+|+++.+++.++++++..|+. ++++..+|+..+.
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 180 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP---- 180 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC----
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC----
Confidence 3445565 7889999999999999999999875 468999999999999999999999986 6999999998752
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
+..++||+|++.-. + ..+ . ..++|++ +.++|||||+++
T Consensus 181 -------~~~~~fD~V~~~~~------------------l-~~~-~----~~~~l~~-----------~~~~LkpgG~l~ 218 (312)
T 3vc1_A 181 -------FDKGAVTASWNNES------------------T-MYV-D----LHDLFSE-----------HSRFLKVGGRYV 218 (312)
T ss_dssp -------CCTTCEEEEEEESC------------------G-GGS-C----HHHHHHH-----------HHHHEEEEEEEE
T ss_pred -------CCCCCEeEEEECCc------------------h-hhC-C----HHHHHHH-----------HHHHcCCCcEEE
Confidence 34578999997211 0 111 1 3677888 999999999999
Q ss_pred EEecCC
Q psy17793 234 YCTCSL 239 (397)
Q Consensus 234 ysTCS~ 239 (397)
+++...
T Consensus 219 ~~~~~~ 224 (312)
T 3vc1_A 219 TITGCW 224 (312)
T ss_dssp EEEEEE
T ss_pred EEEccc
Confidence 987543
No 65
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.40 E-value=1.4e-12 Score=121.49 Aligned_cols=132 Identities=23% Similarity=0.226 Sum_probs=98.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
...++.+|||+|||+|..+..+|... ..++|+|+|+|+.+++.++++++++|+++|+++++|+..+... ..
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--------~~ 137 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR--------KD 137 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC--------TT
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc--------cc
Confidence 34578899999999999999998753 4679999999999999999999999998899999998765210 00
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
..++||+|+++.- . ++ ..+++. +.++|||||++++..+....
T Consensus 138 ~~~~fD~V~~~~~--------------~--~~-----------~~~l~~-----------~~~~LkpgG~l~~~~g~~~~ 179 (240)
T 1xdz_A 138 VRESYDIVTARAV--------------A--RL-----------SVLSEL-----------CLPLVKKNGLFVALKAASAE 179 (240)
T ss_dssp TTTCEEEEEEECC--------------S--CH-----------HHHHHH-----------HGGGEEEEEEEEEEECC-CH
T ss_pred ccCCccEEEEecc--------------C--CH-----------HHHHHH-----------HHHhcCCCCEEEEEeCCCch
Confidence 1468999998542 1 11 556777 89999999999998776554
Q ss_pred cccHHHHHHHHHHCCCcEEEe
Q psy17793 242 EENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 242 eEnE~vV~~~L~~~~~~~l~~ 262 (397)
+|-++ +...++.+ ++++..
T Consensus 180 ~~~~~-~~~~l~~~-g~~~~~ 198 (240)
T 1xdz_A 180 EELNA-GKKAITTL-GGELEN 198 (240)
T ss_dssp HHHHH-HHHHHHHT-TEEEEE
T ss_pred HHHHH-HHHHHHHc-CCeEeE
Confidence 44333 33455665 455543
No 66
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.40 E-value=1.3e-12 Score=130.65 Aligned_cols=128 Identities=11% Similarity=0.088 Sum_probs=99.1
Q ss_pred chhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC---cEEEEEccccc
Q psy17793 71 NLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS---SIQTHVYDSTR 147 (397)
Q Consensus 71 d~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~---~v~~~~~D~~~ 147 (397)
|..+.++...+...++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++|++.+|+. ++++...|+..
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 4556677778888888999999999999999999874 4679999999999999999999999976 48889999876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
. +..++||+|++|||..... .+.. ....++++. +.++||
T Consensus 287 ~------------~~~~~fD~Ii~nppfh~~~----------------~~~~--~~~~~~l~~-----------~~~~Lk 325 (375)
T 4dcm_A 287 G------------VEPFRFNAVLCNPPFHQQH----------------ALTD--NVAWEMFHH-----------ARRCLK 325 (375)
T ss_dssp T------------CCTTCEEEEEECCCC-----------------------C--CHHHHHHHH-----------HHHHEE
T ss_pred c------------CCCCCeeEEEECCCcccCc----------------ccCH--HHHHHHHHH-----------HHHhCC
Confidence 4 2456899999999953210 0000 011357788 999999
Q ss_pred CCcEEEEEecCCC
Q psy17793 228 KDGILVYCTCSLS 240 (397)
Q Consensus 228 pgG~lvysTCS~~ 240 (397)
|||++++++.+..
T Consensus 326 pgG~l~iv~n~~~ 338 (375)
T 4dcm_A 326 INGELYIVANRHL 338 (375)
T ss_dssp EEEEEEEEEETTS
T ss_pred CCcEEEEEEECCc
Confidence 9999999765433
No 67
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.40 E-value=1.9e-12 Score=122.09 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=98.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..++.+|... +..+|+++|+|+.+++.+++|++++|+.||+++++|+..+... ...
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~--------~~~ 148 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE--------AGH 148 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS--------TTT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc--------ccc
Confidence 3578899999999999999999875 5679999999999999999999999999999999998765310 012
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|++.+- . ++ ..+++. +.++|||||++++..+....+
T Consensus 149 ~~~fD~I~s~a~--------------~--~~-----------~~ll~~-----------~~~~LkpgG~l~~~~g~~~~~ 190 (249)
T 3g89_A 149 REAYARAVARAV--------------A--PL-----------CVLSEL-----------LLPFLEVGGAAVAMKGPRVEE 190 (249)
T ss_dssp TTCEEEEEEESS--------------C--CH-----------HHHHHH-----------HGGGEEEEEEEEEEECSCCHH
T ss_pred CCCceEEEECCc--------------C--CH-----------HHHHHH-----------HHHHcCCCeEEEEEeCCCcHH
Confidence 368999998431 0 11 456667 899999999999887764444
Q ss_pred ccHHHHHHHHHHCCCcEEEec
Q psy17793 243 ENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 243 EnE~vV~~~L~~~~~~~l~~~ 263 (397)
|-+ .+...++.. ++++..+
T Consensus 191 e~~-~~~~~l~~~-G~~~~~~ 209 (249)
T 3g89_A 191 ELA-PLPPALERL-GGRLGEV 209 (249)
T ss_dssp HHT-THHHHHHHH-TEEEEEE
T ss_pred HHH-HHHHHHHHc-CCeEEEE
Confidence 433 234445555 4555543
No 68
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.40 E-value=2e-12 Score=118.82 Aligned_cols=109 Identities=23% Similarity=0.328 Sum_probs=82.9
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
+.+++|++|||+|||+|..+.++|...+ .++|+|+|+|+.+++.+.+++++. .|+.++.+|+...... .+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~-------~~ 122 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKY-------SG 122 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGT-------TT
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhh-------cc
Confidence 4567899999999999999999999875 689999999999998887777654 4788888888764110 01
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+ .++||.|++|.+ . +.. ...++++ +.++|||||+++++.
T Consensus 123 ~-~~~fD~V~~~~~--------------~----~~~-------~~~~l~~-----------~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 123 I-VEKVDLIYQDIA--------------Q----KNQ-------IEILKAN-----------AEFFLKEKGEVVIMV 161 (210)
T ss_dssp T-CCCEEEEEECCC--------------S----TTH-------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred c-ccceeEEEEecc--------------C----hhH-------HHHHHHH-----------HHHHhCCCCEEEEEE
Confidence 2 368999999743 0 100 1234677 889999999999984
No 69
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.40 E-value=1.1e-12 Score=121.61 Aligned_cols=92 Identities=17% Similarity=0.175 Sum_probs=77.1
Q ss_pred hHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEccccccccc
Q psy17793 73 PSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTS 151 (397)
Q Consensus 73 ~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~ 151 (397)
...++..+....++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.++++++++|+ .+++++++|+..+.
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-- 140 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--
Confidence 3444444444557899999999999999999984 37999999999999999999999998 57999999997762
Q ss_pred chhhHHHhhhcccCccEEEEcCCCCCCC
Q psy17793 152 SQIDIERMKLQKESFDRILLDAPCSGFG 179 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~DpPCSg~G 179 (397)
..++||+|++||||.+.+
T Consensus 141 ----------~~~~~D~v~~~~~~~~~~ 158 (241)
T 3gdh_A 141 ----------SFLKADVVFLSPPWGGPD 158 (241)
T ss_dssp ----------GGCCCSEEEECCCCSSGG
T ss_pred ----------ccCCCCEEEECCCcCCcc
Confidence 346899999999998744
No 70
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=1.1e-12 Score=123.53 Aligned_cols=129 Identities=18% Similarity=0.198 Sum_probs=98.4
Q ss_pred EEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccc
Q psy17793 68 ILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDST 146 (397)
Q Consensus 68 ~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~ 146 (397)
.++.....++..++...++.+|||+|||+|..+..+|..+.+.++|+++|+|+.+++.+++++++.|+. +|+++.+|+.
T Consensus 62 ~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 62 TTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 345666666666666667789999999999999999998765789999999999999999999999984 6999999987
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
..... .....+..++||+|++|+++.. . ..+++. +.++|
T Consensus 142 ~~l~~----l~~~~~~~~~fD~V~~d~~~~~---------------~-----------~~~l~~-----------~~~~L 180 (247)
T 1sui_A 142 PVLDE----MIKDEKNHGSYDFIFVDADKDN---------------Y-----------LNYHKR-----------LIDLV 180 (247)
T ss_dssp HHHHH----HHHSGGGTTCBSEEEECSCSTT---------------H-----------HHHHHH-----------HHHHB
T ss_pred HHHHH----HHhccCCCCCEEEEEEcCchHH---------------H-----------HHHHHH-----------HHHhC
Confidence 65211 0000001468999999986210 1 345666 88899
Q ss_pred cCCcEEEEEec
Q psy17793 227 KKDGILVYCTC 237 (397)
Q Consensus 227 kpgG~lvysTC 237 (397)
||||+|++...
T Consensus 181 kpGG~lv~d~~ 191 (247)
T 1sui_A 181 KVGGVIGYDNT 191 (247)
T ss_dssp CTTCCEEEECT
T ss_pred CCCeEEEEecC
Confidence 99999998753
No 71
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.40 E-value=4.2e-13 Score=122.18 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=96.3
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~ 147 (397)
++.....+...++...++.+|||+|||+|..+..++..+...++|+++|+|+.+++.+++++++.++. +++++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 45555555555555556789999999999999999997754789999999999999999999999986 49999999876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
... ...+ ||+|++|+++.. . ..+++. +.++||
T Consensus 120 ~~~----------~~~~-fD~v~~~~~~~~---------------~-----------~~~l~~-----------~~~~Lk 151 (210)
T 3c3p_A 120 IAA----------GQRD-IDILFMDCDVFN---------------G-----------ADVLER-----------MNRCLA 151 (210)
T ss_dssp HHT----------TCCS-EEEEEEETTTSC---------------H-----------HHHHHH-----------HGGGEE
T ss_pred Hhc----------cCCC-CCEEEEcCChhh---------------h-----------HHHHHH-----------HHHhcC
Confidence 421 1235 999999865211 1 456677 899999
Q ss_pred CCcEEEEEecCC
Q psy17793 228 KDGILVYCTCSL 239 (397)
Q Consensus 228 pgG~lvysTCS~ 239 (397)
|||+|++.++.+
T Consensus 152 pgG~lv~~~~~~ 163 (210)
T 3c3p_A 152 KNALLIAVNALR 163 (210)
T ss_dssp EEEEEEEESSSS
T ss_pred CCeEEEEECccc
Confidence 999999986654
No 72
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.40 E-value=1.1e-12 Score=118.98 Aligned_cols=98 Identities=19% Similarity=0.248 Sum_probs=83.2
Q ss_pred CCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEE
Q psy17793 63 DSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHV 142 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~ 142 (397)
..|.++.+......+...+.+.++++|||+|||+|..+..++.. .++|+++|+|+.+++.++++++++|+.++++..
T Consensus 55 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 131 (210)
T 3lbf_A 55 GQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRH 131 (210)
T ss_dssp TTSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEE
Confidence 34556666666666777888899999999999999999999987 479999999999999999999999999999999
Q ss_pred cccccccccchhhHHHhhhcccCccEEEEcCC
Q psy17793 143 YDSTRINTSSQIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 143 ~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpP 174 (397)
+|+.... ...++||+|+++..
T Consensus 132 ~d~~~~~-----------~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 132 GDGWQGW-----------QARAPFDAIIVTAA 152 (210)
T ss_dssp SCGGGCC-----------GGGCCEEEEEESSB
T ss_pred CCcccCC-----------ccCCCccEEEEccc
Confidence 9997753 23468999999765
No 73
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.38 E-value=6.9e-13 Score=128.34 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=101.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEEcccccccccchhhHHHh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--Q--LSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g--~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
..+.+|||+|||+|+.+..++... +..+|+++|+|+.+++.+++++..+ + ..+++++.+|+.....
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------- 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR--------- 158 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG---------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh---------
Confidence 345799999999999999988753 4579999999999999999998762 2 3579999999876531
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC-
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS- 238 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS- 238 (397)
...++||+|++|+|+...|.. .. + .+.++++. +.++|||||++++.+|+
T Consensus 159 -~~~~~fD~Ii~d~~~~~~~~~-------------~~---l--~~~~~l~~-----------~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 159 -KFKNEFDVIIIDSTDPTAGQG-------------GH---L--FTEEFYQA-----------CYDALKEDGVFSAETEDP 208 (296)
T ss_dssp -GCSSCEEEEEEEC--------------------------C--CSHHHHHH-----------HHHHEEEEEEEEEECCCT
T ss_pred -hCCCCceEEEEcCCCcccCch-------------hh---h--hHHHHHHH-----------HHHhcCCCcEEEEEccCc
Confidence 134679999999986322210 00 0 12566777 88999999999999988
Q ss_pred -CCccccHHHHHHHHHHCCCcEEE
Q psy17793 239 -LSVEENEAVIAWILHRHPEVELV 261 (397)
Q Consensus 239 -~~~eEnE~vV~~~L~~~~~~~l~ 261 (397)
+..++...+++.+.+.++.+...
T Consensus 209 ~~~~~~~~~~~~~l~~~F~~v~~~ 232 (296)
T 1inl_A 209 FYDIGWFKLAYRRISKVFPITRVY 232 (296)
T ss_dssp TTTHHHHHHHHHHHHHHCSEEEEE
T ss_pred ccCHHHHHHHHHHHHHHCCceEEE
Confidence 45677777888887777655443
No 74
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.38 E-value=9.4e-13 Score=125.20 Aligned_cols=123 Identities=20% Similarity=0.274 Sum_probs=91.4
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMN-DTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDST 146 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~-~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~ 146 (397)
+++....++... +++|.+|||+|||+|..+..++.... ++.+|+|+|+|+.+++.++++++..+.. +|+++++|+.
T Consensus 56 ~~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 344444444444 46899999999999999999998764 3459999999999999999999988865 6999999998
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
++. .++||+|++.-- ..... ... ...+|++ +.+.|
T Consensus 134 ~~~-------------~~~~d~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------i~~~L 168 (261)
T 4gek_A 134 DIA-------------IENASMVVLNFT----------LQFLE----PSE-------RQALLDK-----------IYQGL 168 (261)
T ss_dssp TCC-------------CCSEEEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHHE
T ss_pred ccc-------------ccccccceeeee----------eeecC----chh-------HhHHHHH-----------HHHHc
Confidence 762 256999987210 00011 111 1457888 99999
Q ss_pred cCCcEEEEEecC
Q psy17793 227 KKDGILVYCTCS 238 (397)
Q Consensus 227 kpgG~lvysTCS 238 (397)
||||+|+.+.-.
T Consensus 169 kpGG~lii~e~~ 180 (261)
T 4gek_A 169 NPGGALVLSEKF 180 (261)
T ss_dssp EEEEEEEEEEEB
T ss_pred CCCcEEEEEecc
Confidence 999999988543
No 75
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.38 E-value=3.9e-12 Score=123.03 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=86.4
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
.++++++|++|||+|||+|+.|..+++.. .+++|+|+|+|+.+++.+++++++.|+.+|++.++|+..+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l---------- 184 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI---------- 184 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG----------
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC----------
Confidence 35678999999999999999886554443 3679999999999999999999999998899999999765
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
..++||+|+++.- . . + ..+++++ +.+.|||||+|+..+
T Consensus 185 ---~d~~FDvV~~~a~-----~--------~--d-----------~~~~l~e-----------l~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 185 ---DGLEFDVLMVAAL-----A--------E--P-----------KRRVFRN-----------IHRYVDTETRIIYRT 222 (298)
T ss_dssp ---GGCCCSEEEECTT-----C--------S--C-----------HHHHHHH-----------HHHHCCTTCEEEEEE
T ss_pred ---CCCCcCEEEECCC-----c--------c--C-----------HHHHHHH-----------HHHHcCCCcEEEEEc
Confidence 2468999998432 0 0 0 1456777 889999999999863
No 76
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.37 E-value=4.2e-12 Score=119.68 Aligned_cols=112 Identities=19% Similarity=0.241 Sum_probs=91.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+.++.+|||+|||+|..+..++.. ..++|+|+|+|+.+++.++++++..|+.+ +++...|+..+. +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-----------F 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----------C
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-----------C
Confidence 678899999999999999999886 45699999999999999999999999864 999999997753 3
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
..++||+|++.... ..+ .. .++|++ +.++|||||+++++++++..
T Consensus 111 ~~~~fD~i~~~~~~-------------------~~~-~~----~~~l~~-----------~~~~LkpgG~l~~~~~~~~~ 155 (267)
T 3kkz_A 111 RNEELDLIWSEGAI-------------------YNI-GF----ERGLNE-----------WRKYLKKGGYLAVSECSWFT 155 (267)
T ss_dssp CTTCEEEEEESSCG-------------------GGT-CH----HHHHHH-----------HGGGEEEEEEEEEEEEEESS
T ss_pred CCCCEEEEEEcCCc-------------------eec-CH----HHHHHH-----------HHHHcCCCCEEEEEEeeecC
Confidence 45789999985441 111 11 556777 99999999999999876543
Q ss_pred c
Q psy17793 242 E 242 (397)
Q Consensus 242 e 242 (397)
.
T Consensus 156 ~ 156 (267)
T 3kkz_A 156 D 156 (267)
T ss_dssp S
T ss_pred C
Confidence 3
No 77
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.37 E-value=3.5e-12 Score=112.90 Aligned_cols=116 Identities=19% Similarity=0.238 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
..++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++++.+++ ++++++.+|+...... .++
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~ 112 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ-------FYE 112 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH-------HHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH-------HHh
Confidence 357889999999999999988873 457999999999999999999999998 4799999998764210 112
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
..++||+|++|||... .. . ...+.. ..+.++|||||.+++++++-.
T Consensus 113 ~~~~fD~i~~~~~~~~----------~~---~-----------~~~~~~---------l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYAK----------QE---I-----------VSQLEK---------MLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TTCCEEEEEECCCGGG----------CC---H-----------HHHHHH---------HHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCCEEEECCCCCc----------hh---H-----------HHHHHH---------HHHhcccCCCCEEEEEeCCcc
Confidence 2568999999998320 00 1 111222 004789999999999988744
No 78
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.37 E-value=3.6e-13 Score=132.64 Aligned_cols=163 Identities=10% Similarity=0.051 Sum_probs=108.8
Q ss_pred CCcEEEechhHHHHHhcc----CCCCCCeEEEEcCCCChHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 64 SSMGILQNLPSILAGHYL----DVQPGQKVLDMCAAPGNKLTHIALLMNDT----GTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L----~~~~g~~VLDlcagpG~kt~~lA~~~~~~----~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
.|.++..+....+++.++ .+.++.+|||.|||+|+.++.++..+... ..|+|+|+++.+++.++.|+...|+
T Consensus 105 ~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~ 184 (344)
T 2f8l_A 105 VNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ 184 (344)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred cCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC
Confidence 355555554444444443 56678899999999999999999876432 7899999999999999999999998
Q ss_pred CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhh
Q psy17793 136 SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFV 215 (397)
Q Consensus 136 ~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~ 215 (397)
++.+.++|+.... ....||+|++|||++.... .+....+. ..........+..++.+
T Consensus 185 -~~~i~~~D~l~~~------------~~~~fD~Ii~NPPfg~~~~-~~~~~~~~----~~~~~g~~~~~~~~l~~----- 241 (344)
T 2f8l_A 185 -KMTLLHQDGLANL------------LVDPVDVVISDLPVGYYPD-DENAKTFE----LCREEGHSFAHFLFIEQ----- 241 (344)
T ss_dssp -CCEEEESCTTSCC------------CCCCEEEEEEECCCSEESC-HHHHTTST----TCCSSSCEEHHHHHHHH-----
T ss_pred -CceEEECCCCCcc------------ccCCccEEEECCCCCCcCc-hhhhhhcc----ccCCCCcchHHHHHHHH-----
Confidence 6889999986542 3467999999999732110 00000000 00000111234567888
Q ss_pred ccccccccccccCCcEEEEEec-CCCccccHHHHHHHHHHC
Q psy17793 216 SLFDWQGIPLLKKDGILVYCTC-SLSVEENEAVIAWILHRH 255 (397)
Q Consensus 216 ~~~~~~a~~lLkpgG~lvysTC-S~~~eEnE~vV~~~L~~~ 255 (397)
+.++|||||++++.+. ++...+.+..+...|.+.
T Consensus 242 ------~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 242 ------GMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp ------HHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ------HHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 9999999999988863 333344445555555443
No 79
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.37 E-value=4.6e-12 Score=111.95 Aligned_cols=139 Identities=13% Similarity=0.119 Sum_probs=103.6
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRI 148 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~ 148 (397)
++.....+...+.+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.++++++.+++ .++.+...|+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 44444555566778899999999999999999888853 7999999999999999999999998 6799999988653
Q ss_pred cccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Q psy17793 149 NTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK 228 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp 228 (397)
.. ..+.||+|+++.+.. +. ..+++. +.++|+|
T Consensus 95 ~~-----------~~~~~D~v~~~~~~~---------------~~-----------~~~l~~-----------~~~~l~~ 126 (192)
T 1l3i_A 95 LC-----------KIPDIDIAVVGGSGG---------------EL-----------QEILRI-----------IKDKLKP 126 (192)
T ss_dssp HT-----------TSCCEEEEEESCCTT---------------CH-----------HHHHHH-----------HHHTEEE
T ss_pred cc-----------cCCCCCEEEECCchH---------------HH-----------HHHHHH-----------HHHhcCC
Confidence 10 114799999976510 11 456777 8899999
Q ss_pred CcEEEEEecCCCccccHHHHHHHHHHCC-CcEEEe
Q psy17793 229 DGILVYCTCSLSVEENEAVIAWILHRHP-EVELVQ 262 (397)
Q Consensus 229 gG~lvysTCS~~~eEnE~vV~~~L~~~~-~~~l~~ 262 (397)
||.+++++++ .++...+..++++.+ .++...
T Consensus 127 gG~l~~~~~~---~~~~~~~~~~l~~~g~~~~~~~ 158 (192)
T 1l3i_A 127 GGRIIVTAIL---LETKFEAMECLRDLGFDVNITE 158 (192)
T ss_dssp EEEEEEEECB---HHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEEEecC---cchHHHHHHHHHHCCCceEEEE
Confidence 9999998775 233344555666653 334433
No 80
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.36 E-value=4.6e-12 Score=126.38 Aligned_cols=136 Identities=18% Similarity=0.208 Sum_probs=101.1
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..+ ..++.+|||+|||+|..+..+|... ..++|+|+|+|+.+++.+++|++.+|+ ++|++.++|+..+.
T Consensus 212 ~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-------- 281 (373)
T 3tm4_A 212 ELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-------- 281 (373)
T ss_dssp HHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG--------
T ss_pred Hhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------
Confidence 344 7789999999999999999988863 345899999999999999999999998 57999999998763
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
+..++||+|++|||+.- + ......+..+..++++. +.++| ||.++|.||
T Consensus 282 ---~~~~~fD~Ii~npPyg~---r------------~~~~~~~~~ly~~~~~~-----------l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 282 ---QYVDSVDFAISNLPYGL---K------------IGKKSMIPDLYMKFFNE-----------LAKVL--EKRGVFITT 330 (373)
T ss_dssp ---GTCSCEEEEEEECCCC---------------------CCHHHHHHHHHHH-----------HHHHE--EEEEEEEES
T ss_pred ---cccCCcCEEEECCCCCc---c------------cCcchhHHHHHHHHHHH-----------HHHHc--CCeEEEEEC
Confidence 23468999999999632 1 01112233445677777 77777 788888877
Q ss_pred CCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 238 SLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 238 S~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
+ .+.+...+++. +++...
T Consensus 331 ~------~~~~~~~~~~~-G~~~~~ 348 (373)
T 3tm4_A 331 E------KKAIEEAIAEN-GFEIIH 348 (373)
T ss_dssp C------HHHHHHHHHHT-TEEEEE
T ss_pred C------HHHHHHHHHHc-CCEEEE
Confidence 3 34555666665 566554
No 81
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.36 E-value=1.4e-11 Score=114.82 Aligned_cols=125 Identities=17% Similarity=0.225 Sum_probs=98.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+.+|++|||+|||+|..++.+|.. +..++|+|+|+++.+++.+++|++++|+.+ |++..+|+....
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l------------ 79 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAF------------ 79 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC------------
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhc------------
Confidence 457889999999999999998885 346799999999999999999999999975 999999986542
Q ss_pred cc-cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 162 QK-ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 162 ~~-~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
.. ..||.|++ .|.| ...+ .++|.. +...|+++|++|++.-
T Consensus 80 ~~~~~~D~Ivi----aG~G--------------g~~i-------~~Il~~-----------~~~~L~~~~~lVlq~~--- 120 (225)
T 3kr9_A 80 EETDQVSVITI----AGMG--------------GRLI-------ARILEE-----------GLGKLANVERLILQPN--- 120 (225)
T ss_dssp CGGGCCCEEEE----EEEC--------------HHHH-------HHHHHH-----------TGGGCTTCCEEEEEES---
T ss_pred ccCcCCCEEEE----cCCC--------------hHHH-------HHHHHH-----------HHHHhCCCCEEEEECC---
Confidence 22 26998886 1211 1112 567888 9999999999999743
Q ss_pred ccccHHHHHHHHHHCCCcEEEe
Q psy17793 241 VEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 241 ~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
.+++.+..+|.++ +|.++.
T Consensus 121 --~~~~~vr~~L~~~-Gf~i~~ 139 (225)
T 3kr9_A 121 --NREDDLRIWLQDH-GFQIVA 139 (225)
T ss_dssp --SCHHHHHHHHHHT-TEEEEE
T ss_pred --CCHHHHHHHHHHC-CCEEEE
Confidence 3677888888888 577765
No 82
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.8e-11 Score=107.38 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=99.9
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRIN 149 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~ 149 (397)
.+.....+...+...++.+|||+|||+|..+..++. ...+|+++|+|+.+++.++++++.+|++++++...|+...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~- 95 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV- 95 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH-
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc-
Confidence 333344555666778899999999999999998887 5679999999999999999999999998899999998653
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
+..++||+|+++++ . . . ..+++. +.++ ||
T Consensus 96 -----------~~~~~~D~i~~~~~--~-----------~---~-----------~~~l~~-----------~~~~--~g 124 (183)
T 2yxd_A 96 -----------LDKLEFNKAFIGGT--K-----------N---I-----------EKIIEI-----------LDKK--KI 124 (183)
T ss_dssp -----------GGGCCCSEEEECSC--S-----------C---H-----------HHHHHH-----------HHHT--TC
T ss_pred -----------ccCCCCcEEEECCc--c-----------c---H-----------HHHHHH-----------HhhC--CC
Confidence 23468999999876 0 1 1 334454 5555 99
Q ss_pred cEEEEEecCCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 230 GILVYCTCSLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 230 G~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
|.++++++. + ++...+...+++++ +.+..
T Consensus 125 G~l~~~~~~--~-~~~~~~~~~l~~~g-~~~~~ 153 (183)
T 2yxd_A 125 NHIVANTIV--L-ENAAKIINEFESRG-YNVDA 153 (183)
T ss_dssp CEEEEEESC--H-HHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEecc--c-ccHHHHHHHHHHcC-CeEEE
Confidence 999999765 2 23334556667764 54443
No 83
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.35 E-value=5.9e-12 Score=115.58 Aligned_cols=140 Identities=10% Similarity=0.099 Sum_probs=98.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..+|... +...|+|+|+|+.+++.+++++++.|+.|++++.+|+..+.. .+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~---------~~~~ 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD---------VFEP 106 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH---------HCCT
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh---------hcCc
Confidence 457899999999999999999875 467999999999999999999999999999999999987521 1345
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccc
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEE 243 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eE 243 (397)
++||.|+++.|. |....... ... + .+..+|+. +.++|||||.|+++|-. .+
T Consensus 107 ~~~d~v~~~~~~------p~~~~~~~----~~r---l--~~~~~l~~-----------~~~~LkpgG~l~~~td~---~~ 157 (213)
T 2fca_A 107 GEVKRVYLNFSD------PWPKKRHE----KRR---L--TYSHFLKK-----------YEEVMGKGGSIHFKTDN---RG 157 (213)
T ss_dssp TSCCEEEEESCC------CCCSGGGG----GGS---T--TSHHHHHH-----------HHHHHTTSCEEEEEESC---HH
T ss_pred CCcCEEEEECCC------CCcCcccc----ccc---c--CcHHHHHH-----------HHHHcCCCCEEEEEeCC---HH
Confidence 689999987652 11110000 000 0 13567788 89999999999998532 11
Q ss_pred cHHHHHHHHHHCCCcEEEec
Q psy17793 244 NEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 244 nE~vV~~~L~~~~~~~l~~~ 263 (397)
.-+.+...++++ +++....
T Consensus 158 ~~~~~~~~~~~~-g~~~~~~ 176 (213)
T 2fca_A 158 LFEYSLKSFSEY-GLLLTYV 176 (213)
T ss_dssp HHHHHHHHHHHH-TCEEEEE
T ss_pred HHHHHHHHHHHC-CCccccc
Confidence 122333444554 4665543
No 84
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.35 E-value=1.2e-11 Score=111.78 Aligned_cols=127 Identities=18% Similarity=0.241 Sum_probs=94.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++.+++ +++++.+|+..+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~------------- 109 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF------------- 109 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC-------------
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc-------------
Confidence 4567899999999999999998885 345899999999999999999999988 899999998764
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
. .+||+|++|||+.-... . ...++|+. +.+++ || +|+.| +.+
T Consensus 110 ~-~~~D~v~~~~p~~~~~~--------~-------------~~~~~l~~-----------~~~~l--~~--~~~~~-~~~ 151 (207)
T 1wy7_A 110 N-SRVDIVIMNPPFGSQRK--------H-------------ADRPFLLK-----------AFEIS--DV--VYSIH-LAK 151 (207)
T ss_dssp C-CCCSEEEECCCCSSSST--------T-------------TTHHHHHH-----------HHHHC--SE--EEEEE-ECC
T ss_pred C-CCCCEEEEcCCCccccC--------C-------------chHHHHHH-----------HHHhc--Cc--EEEEE-eCC
Confidence 1 37999999999643210 0 01334555 55665 43 56666 335
Q ss_pred cccHHHHHHHHHHCCCcEEEec
Q psy17793 242 EENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 242 eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
.++.+.+..++++. ++++..+
T Consensus 152 ~~~~~~~~~~l~~~-g~~~~~~ 172 (207)
T 1wy7_A 152 PEVRRFIEKFSWEH-GFVVTHR 172 (207)
T ss_dssp HHHHHHHHHHHHHT-TEEEEEE
T ss_pred cCCHHHHHHHHHHC-CCeEEEE
Confidence 66777788888877 4655443
No 85
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=2.2e-12 Score=118.62 Aligned_cols=126 Identities=14% Similarity=0.174 Sum_probs=96.2
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~ 147 (397)
+......++..++...++.+|||+|||+|..+..+|..+.+.++|+++|+++.+++.+++++++.|+ .+++++.+|+..
T Consensus 53 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 53 MTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 3444445555556667788999999999999999998775578999999999999999999999998 469999999865
Q ss_pred ccccchhhHHHhhhc--ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Q psy17793 148 INTSSQIDIERMKLQ--KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPL 225 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~--~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~l 225 (397)
.... .... .++||+|++|++. ... ..+++. +.++
T Consensus 133 ~~~~-------~~~~~~~~~~D~v~~d~~~-------------------~~~-------~~~l~~-----------~~~~ 168 (229)
T 2avd_A 133 TLDE-------LLAAGEAGTFDVAVVDADK-------------------ENC-------SAYYER-----------CLQL 168 (229)
T ss_dssp HHHH-------HHHTTCTTCEEEEEECSCS-------------------TTH-------HHHHHH-----------HHHH
T ss_pred HHHH-------HHhcCCCCCccEEEECCCH-------------------HHH-------HHHHHH-----------HHHH
Confidence 4211 0001 1579999999871 101 345666 8889
Q ss_pred ccCCcEEEEEecC
Q psy17793 226 LKKDGILVYCTCS 238 (397)
Q Consensus 226 LkpgG~lvysTCS 238 (397)
|||||.+++..+.
T Consensus 169 L~pgG~lv~~~~~ 181 (229)
T 2avd_A 169 LRPGGILAVLRVL 181 (229)
T ss_dssp EEEEEEEEEECCS
T ss_pred cCCCeEEEEECCC
Confidence 9999999997654
No 86
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.35 E-value=1e-11 Score=115.83 Aligned_cols=114 Identities=15% Similarity=0.193 Sum_probs=91.5
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHH
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~ 158 (397)
+..+.++.+|||+|||+|..+..++...+ ++|+|+|+|+.+++.++++++..|+.+ +++..+|+..+.
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------- 109 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--------- 109 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS---------
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC---------
Confidence 33567889999999999999999999752 499999999999999999999999876 999999997653
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+..++||+|++.-... ... . .++|++ +.++|||||++++++++
T Consensus 110 --~~~~~fD~v~~~~~l~----------~~~---~-----------~~~l~~-----------~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 110 --FQNEELDLIWSEGAIY----------NIG---F-----------ERGMNE-----------WSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp --SCTTCEEEEEEESCSC----------CCC---H-----------HHHHHH-----------HHTTEEEEEEEEEEEEE
T ss_pred --CCCCCEEEEEecChHh----------hcC---H-----------HHHHHH-----------HHHHcCCCcEEEEEEee
Confidence 3457899999853310 001 1 456777 99999999999999876
Q ss_pred CCc
Q psy17793 239 LSV 241 (397)
Q Consensus 239 ~~~ 241 (397)
...
T Consensus 153 ~~~ 155 (257)
T 3f4k_A 153 WFT 155 (257)
T ss_dssp ESS
T ss_pred ccC
Confidence 433
No 87
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.35 E-value=2.9e-12 Score=119.08 Aligned_cols=128 Identities=18% Similarity=0.282 Sum_probs=97.9
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+..+|..+...++|+++|+++.+++.+++++++.|+. +|++..+|+..
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34445555555555567789999999999999999998765689999999999999999999999986 49999999865
Q ss_pred ccccchhhHHHhhhcc--cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Q psy17793 148 INTSSQIDIERMKLQK--ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPL 225 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~--~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~l 225 (397)
.... .+... ++||+|++|++. ... ..+++. +.++
T Consensus 136 ~l~~-------l~~~~~~~~fD~V~~d~~~-------------------~~~-------~~~l~~-----------~~~~ 171 (232)
T 3cbg_A 136 TLEQ-------LTQGKPLPEFDLIFIDADK-------------------RNY-------PRYYEI-----------GLNL 171 (232)
T ss_dssp HHHH-------HHTSSSCCCEEEEEECSCG-------------------GGH-------HHHHHH-----------HHHT
T ss_pred HHHH-------HHhcCCCCCcCEEEECCCH-------------------HHH-------HHHHHH-----------HHHH
Confidence 4211 11112 679999998761 111 345666 8899
Q ss_pred ccCCcEEEEEecCCC
Q psy17793 226 LKKDGILVYCTCSLS 240 (397)
Q Consensus 226 LkpgG~lvysTCS~~ 240 (397)
|||||+|++..+.+.
T Consensus 172 LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 172 LRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEEEEEEEECTTGG
T ss_pred cCCCeEEEEeCCCcC
Confidence 999999999877654
No 88
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.35 E-value=9.7e-12 Score=114.90 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=98.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..+|... +...|+|+|+|+.+++.+++++++.|++|++++.+|+..+.. ..+..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~--------~~~~~~ 104 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLH--------KMIPDN 104 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHH--------HHSCTT
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHH--------HHcCCC
Confidence 57899999999999999999874 467899999999999999999999999999999999877521 114567
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcccc
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEEN 244 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEn 244 (397)
+||.|+++-|. |....... .. .+ .|..+++. +.++|||||+|+++|-. +.-
T Consensus 105 ~~d~v~~~~~~------p~~~~~~~----~r---r~--~~~~~l~~-----------~~r~LkpGG~l~i~td~---~~~ 155 (218)
T 3dxy_A 105 SLRMVQLFFPD------PWHKARHN----KR---RI--VQVPFAEL-----------VKSKLQLGGVFHMATDW---EPY 155 (218)
T ss_dssp CEEEEEEESCC------CCCSGGGG----GG---SS--CSHHHHHH-----------HHHHEEEEEEEEEEESC---HHH
T ss_pred ChheEEEeCCC------Cccchhhh----hh---hh--hhHHHHHH-----------HHHHcCCCcEEEEEeCC---HHH
Confidence 89999997331 11100000 00 00 12456777 88999999999998643 222
Q ss_pred HHHHHHHHHHCCCcEEEe
Q psy17793 245 EAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 245 E~vV~~~L~~~~~~~l~~ 262 (397)
-+.+...+...++++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 156 AEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp HHHHHHHHHTSTTEEECC
T ss_pred HHHHHHHHHhCCCccccc
Confidence 223444555666665543
No 89
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.35 E-value=1.1e-11 Score=115.94 Aligned_cols=140 Identities=15% Similarity=0.204 Sum_probs=98.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--------CCCcEEEEEcccccccccchhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--------QLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--------g~~~v~~~~~D~~~~~~~~~~d 155 (397)
.++.+|||+|||+|..+..+|... +...|+|+|+|+.+++.++++++.+ ++.|++++.+|+......
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~---- 122 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPN---- 122 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGG----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHH----
Confidence 567899999999999999999874 4569999999999999999999988 888999999999864211
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
.+..+.+|.|+++-|.. ...... ....+ .+..++.. +.++|||||.|++.
T Consensus 123 ----~~~~~~~d~v~~~~p~p------~~k~~~-------~~~r~--~~~~~l~~-----------~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 123 ----FFEKGQLSKMFFCFPDP------HFKQRK-------HKARI--ITNTLLSE-----------YAYVLKEGGVVYTI 172 (246)
T ss_dssp ----TSCTTCEEEEEEESCCC------C-------------CSSC--CCHHHHHH-----------HHHHEEEEEEEEEE
T ss_pred ----hccccccCEEEEECCCc------ccccch-------hHHhh--ccHHHHHH-----------HHHHcCCCCEEEEE
Confidence 13456899988765421 110000 00000 12567777 89999999999997
Q ss_pred ecCCCccccHHHHHHHHHHCCCcEEE
Q psy17793 236 TCSLSVEENEAVIAWILHRHPEVELV 261 (397)
Q Consensus 236 TCS~~~eEnE~vV~~~L~~~~~~~l~ 261 (397)
|- .++..+.+...+..++.++.+
T Consensus 173 td---~~~~~~~~~~~~~~~~~~~~~ 195 (246)
T 2vdv_E 173 TD---VKDLHEWMVKHLEEHPLFERL 195 (246)
T ss_dssp ES---CHHHHHHHHHHHHHSTTEEEC
T ss_pred ec---cHHHHHHHHHHHHhCcCeEec
Confidence 53 233344555556677654443
No 90
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.34 E-value=1.6e-12 Score=121.98 Aligned_cols=128 Identities=14% Similarity=0.132 Sum_probs=94.9
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
|.......|......+...+.+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.++++++..|+.++.+.
T Consensus 14 ~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~ 90 (260)
T 1vl5_A 14 YVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYV 90 (260)
T ss_dssp ---------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred eecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEE
Confidence 3444455666666667777888899999999999999999888753 4999999999999999999999999899999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQ 221 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~ 221 (397)
.+|+..+. +..++||+|++.-. ...+. +. ..+|.+
T Consensus 91 ~~d~~~l~-----------~~~~~fD~V~~~~~----------l~~~~--d~-----------~~~l~~----------- 125 (260)
T 1vl5_A 91 QGDAEQMP-----------FTDERFHIVTCRIA----------AHHFP--NP-----------ASFVSE----------- 125 (260)
T ss_dssp ECCC-CCC-----------SCTTCEEEEEEESC----------GGGCS--CH-----------HHHHHH-----------
T ss_pred EecHHhCC-----------CCCCCEEEEEEhhh----------hHhcC--CH-----------HHHHHH-----------
Confidence 99997753 45578999997321 11111 11 456777
Q ss_pred ccccccCCcEEEEEec
Q psy17793 222 GIPLLKKDGILVYCTC 237 (397)
Q Consensus 222 a~~lLkpgG~lvysTC 237 (397)
+.++|||||+|++++.
T Consensus 126 ~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 126 AYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEEc
Confidence 8999999999998743
No 91
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.34 E-value=6e-12 Score=123.19 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=88.7
Q ss_pred HHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----------CCcEEEEE
Q psy17793 74 SILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ-----------LSSIQTHV 142 (397)
Q Consensus 74 S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g-----------~~~v~~~~ 142 (397)
...+...+++.+|++|||+|||+|..+..++...+..++|+++|+++.+++.+++|++++| ..++++..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 4455566788999999999999999999999987666899999999999999999999754 35799999
Q ss_pred cccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccc
Q psy17793 143 YDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQG 222 (397)
Q Consensus 143 ~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a 222 (397)
+|+..... ++..+.||+|++|+|.. ..++.+ +
T Consensus 174 ~d~~~~~~---------~~~~~~fD~V~~~~~~~----------------------------~~~l~~-----------~ 205 (336)
T 2b25_A 174 KDISGATE---------DIKSLTFDAVALDMLNP----------------------------HVTLPV-----------F 205 (336)
T ss_dssp SCTTCCC----------------EEEEEECSSST----------------------------TTTHHH-----------H
T ss_pred CChHHccc---------ccCCCCeeEEEECCCCH----------------------------HHHHHH-----------H
Confidence 99977531 13345799999988721 113455 8
Q ss_pred cccccCCcEEEEE
Q psy17793 223 IPLLKKDGILVYC 235 (397)
Q Consensus 223 ~~lLkpgG~lvys 235 (397)
.++|||||+|+..
T Consensus 206 ~~~LkpgG~lv~~ 218 (336)
T 2b25_A 206 YPHLKHGGVCAVY 218 (336)
T ss_dssp GGGEEEEEEEEEE
T ss_pred HHhcCCCcEEEEE
Confidence 8999999999865
No 92
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.34 E-value=9.6e-12 Score=117.37 Aligned_cols=124 Identities=14% Similarity=0.109 Sum_probs=97.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.+ +. +|+|+|+|+.+++.+++|++++++. +++..+|+... +.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~------------~~ 181 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--GG-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA------------LP 181 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH------------GG
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--CC-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc------------Cc
Confidence 467899999999999999988774 23 9999999999999999999999987 88888887653 23
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|+++.+ ...+ ..++.. +.++|||||+++++... .
T Consensus 182 ~~~fD~Vv~n~~-------------------~~~~-------~~~l~~-----------~~~~LkpgG~lils~~~---~ 221 (254)
T 2nxc_A 182 FGPFDLLVANLY-------------------AELH-------AALAPR-----------YREALVPGGRALLTGIL---K 221 (254)
T ss_dssp GCCEEEEEEECC-------------------HHHH-------HHHHHH-----------HHHHEEEEEEEEEEEEE---G
T ss_pred CCCCCEEEECCc-------------------HHHH-------HHHHHH-----------HHHHcCCCCEEEEEeec---c
Confidence 468999999775 2222 456777 88999999999998543 3
Q ss_pred ccHHHHHHHHHHCCCcEEEec
Q psy17793 243 ENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 243 EnE~vV~~~L~~~~~~~l~~~ 263 (397)
+..+.+...+++. +++++..
T Consensus 222 ~~~~~v~~~l~~~-Gf~~~~~ 241 (254)
T 2nxc_A 222 DRAPLVREAMAGA-GFRPLEE 241 (254)
T ss_dssp GGHHHHHHHHHHT-TCEEEEE
T ss_pred CCHHHHHHHHHHC-CCEEEEE
Confidence 4556677777776 5777654
No 93
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.34 E-value=4.6e-12 Score=127.16 Aligned_cols=156 Identities=16% Similarity=0.144 Sum_probs=106.6
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY 143 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~ 143 (397)
.|.++..+.-..+++..+...++.+|||+|||+|+.+..+++.......|+|+|+++.+++.+ .++.+.++
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~ 88 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILA 88 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEES
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeC
Confidence 456666666666677777766677999999999999999998764567999999999998766 46899999
Q ss_pred ccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHH----------HHHHHHHHHHHhh
Q psy17793 144 DSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSY----------ANIQKKLLQAVYR 213 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l----------~~~Q~~lL~~~~~ 213 (397)
|+.... ..+.||+|++|||+...+.......+.. ......+ .+.+..++++
T Consensus 89 D~~~~~------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~fl~~--- 149 (421)
T 2ih2_A 89 DFLLWE------------PGEAFDLILGNPPYGIVGEASKYPIHVF----KAVKDLYKKAFSTWKGKYNLYGAFLEK--- 149 (421)
T ss_dssp CGGGCC------------CSSCEEEEEECCCCCCBSCTTTCSBCCC----HHHHHHHHHHCTTCCTTCCHHHHHHHH---
T ss_pred ChhhcC------------ccCCCCEEEECcCccCcccccccccccC----HHHHHHHHHhhhcccCCccHHHHHHHH---
Confidence 987652 2368999999999977653211110011 1111111 1234577888
Q ss_pred hhccccccccccccCCcEEEEEecC--CCccccHHHHHHHHHHC
Q psy17793 214 FVSLFDWQGIPLLKKDGILVYCTCS--LSVEENEAVIAWILHRH 255 (397)
Q Consensus 214 f~~~~~~~a~~lLkpgG~lvysTCS--~~~eEnE~vV~~~L~~~ 255 (397)
+.++|++||++++.+.. +.....+.+.+.+++..
T Consensus 150 --------~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~ 185 (421)
T 2ih2_A 150 --------AVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG 185 (421)
T ss_dssp --------HHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHS
T ss_pred --------HHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcC
Confidence 99999999999998875 22334455555555543
No 94
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.34 E-value=2.3e-11 Score=113.66 Aligned_cols=127 Identities=18% Similarity=0.215 Sum_probs=99.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+.+|++|||+|||+|..++.+|.. +...+|+|+|+++.+++.+++|++++|+.+ |++..+|+.... .
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-----------~ 86 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-----------E 86 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-----------C
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-----------c
Confidence 467899999999999999998885 345789999999999999999999999975 999999998763 1
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
....||.|++ .|.| ...+ .+||.. +...|+++|+|+.+.-
T Consensus 87 ~~~~~D~Ivi----aGmG--------------g~lI-------~~IL~~-----------~~~~l~~~~~lIlqp~---- 126 (230)
T 3lec_A 87 EADNIDTITI----CGMG--------------GRLI-------ADILNN-----------DIDKLQHVKTLVLQPN---- 126 (230)
T ss_dssp GGGCCCEEEE----EEEC--------------HHHH-------HHHHHH-----------TGGGGTTCCEEEEEES----
T ss_pred cccccCEEEE----eCCc--------------hHHH-------HHHHHH-----------HHHHhCcCCEEEEECC----
Confidence 2236999875 1211 1222 567888 8899999999999842
Q ss_pred cccHHHHHHHHHHCCCcEEEec
Q psy17793 242 EENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 242 eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
.+++.|..+|.++ +|.++..
T Consensus 127 -~~~~~lr~~L~~~-Gf~i~~E 146 (230)
T 3lec_A 127 -NREDDLRKWLAAN-DFEIVAE 146 (230)
T ss_dssp -SCHHHHHHHHHHT-TEEEEEE
T ss_pred -CChHHHHHHHHHC-CCEEEEE
Confidence 3577788888888 6777653
No 95
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.33 E-value=3.3e-12 Score=119.08 Aligned_cols=115 Identities=18% Similarity=0.124 Sum_probs=91.3
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~ 154 (397)
.+...+.+.++.+|||+|||+|..+..++... +.+|+++|+|+.+++.++++++..|+. ++++..+|+..+.
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 99 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV----- 99 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-----
Confidence 34455677899999999999999999999875 468999999999999999999999985 7999999998763
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
+ .++||+|++.-. ..... + ..++|++ +.++|||||++++
T Consensus 100 ------~-~~~fD~V~~~~~----------~~~~~--~-----------~~~~l~~-----------~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 100 ------A-NEKCDVAACVGA----------TWIAG--G-----------FAGAEEL-----------LAQSLKPGGIMLI 138 (256)
T ss_dssp ------C-SSCEEEEEEESC----------GGGTS--S-----------SHHHHHH-----------HTTSEEEEEEEEE
T ss_pred ------c-CCCCCEEEECCC----------hHhcC--C-----------HHHHHHH-----------HHHHcCCCeEEEE
Confidence 3 578999997221 11111 1 1566777 9999999999999
Q ss_pred EecC
Q psy17793 235 CTCS 238 (397)
Q Consensus 235 sTCS 238 (397)
++..
T Consensus 139 ~~~~ 142 (256)
T 1nkv_A 139 GEPY 142 (256)
T ss_dssp EEEE
T ss_pred ecCc
Confidence 8644
No 96
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.32 E-value=6.4e-12 Score=114.61 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=89.2
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEEcccccccc
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-----SIQTHVYDSTRINT 150 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-----~v~~~~~D~~~~~~ 150 (397)
.+...+...++.+|||+|||+|..+..++... +..+|+++|+|+.+++.++++++..++. ++++..+|+....
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~- 97 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD- 97 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC-
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc-
Confidence 34445556678899999999999999998853 3469999999999999999999888876 6999999986542
Q ss_pred cchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc
Q psy17793 151 SSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG 230 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG 230 (397)
...++||+|++.-. ..... ... ..++|++ +.++|||||
T Consensus 98 ----------~~~~~fD~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~LkpgG 135 (217)
T 3jwh_A 98 ----------KRFHGYDAATVIEV----------IEHLD----LSR-------LGAFERV-----------LFEFAQPKI 135 (217)
T ss_dssp ----------GGGCSCSEEEEESC----------GGGCC----HHH-------HHHHHHH-----------HHTTTCCSE
T ss_pred ----------ccCCCcCEEeeHHH----------HHcCC----HHH-------HHHHHHH-----------HHHHcCCCE
Confidence 23468999997322 11111 111 1567777 999999999
Q ss_pred EEEEEecC
Q psy17793 231 ILVYCTCS 238 (397)
Q Consensus 231 ~lvysTCS 238 (397)
.++.+.+.
T Consensus 136 ~li~~~~~ 143 (217)
T 3jwh_A 136 VIVTTPNI 143 (217)
T ss_dssp EEEEEEBH
T ss_pred EEEEccCc
Confidence 87776553
No 97
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.31 E-value=1.3e-11 Score=120.09 Aligned_cols=93 Identities=12% Similarity=0.210 Sum_probs=78.9
Q ss_pred hhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 72 LPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 72 ~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.....+...+.+++|++|||+|||+|..+..++......++|+++|+|+.+++.++++++..|+.++++..+|+....
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-- 139 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-- 139 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc--
Confidence 444555667788999999999999999999999886545789999999999999999999999989999999997642
Q ss_pred chhhHHHhhhcccCccEEEEcCCC
Q psy17793 152 SQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
...++||+|+++++.
T Consensus 140 ---------~~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 140 ---------PEFSPYDVIFVTVGV 154 (317)
T ss_dssp ---------GGGCCEEEEEECSBB
T ss_pred ---------ccCCCeEEEEEcCCH
Confidence 123679999998874
No 98
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.31 E-value=1.5e-12 Score=121.68 Aligned_cols=140 Identities=13% Similarity=0.123 Sum_probs=100.1
Q ss_pred HHHHHhccCCCCCCeEEEEcCCCChHHHHHHHH---cCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccc
Q psy17793 74 SILAGHYLDVQPGQKVLDMCAAPGNKLTHIALL---MNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINT 150 (397)
Q Consensus 74 S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~---~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~ 150 (397)
..++..++...++.+|||+|||+|..|..+|.. +.+.++|+|+|+|+.+++.++ ..+ .+|+++.+|+.....
T Consensus 70 ~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~ 144 (236)
T 2bm8_A 70 QAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTT 144 (236)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGG
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHH
Confidence 344445555556789999999999999999997 456789999999999988776 122 579999999987410
Q ss_pred cchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccc-cccCC
Q psy17793 151 SSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIP-LLKKD 229 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~-lLkpg 229 (397)
- +.....+||.|++|..- .. . .++|.+ +.+ +||||
T Consensus 145 l-------~~~~~~~fD~I~~d~~~------------~~---~-----------~~~l~~-----------~~r~~LkpG 180 (236)
T 2bm8_A 145 F-------EHLREMAHPLIFIDNAH------------AN---T-----------FNIMKW-----------AVDHLLEEG 180 (236)
T ss_dssp G-------GGGSSSCSSEEEEESSC------------SS---H-----------HHHHHH-----------HHHHTCCTT
T ss_pred H-------HhhccCCCCEEEECCch------------Hh---H-----------HHHHHH-----------HHHhhCCCC
Confidence 0 00122369999998740 01 1 345666 786 99999
Q ss_pred cEEEEEec-CCCccccHHHHHHHHHHCC-CcEEEe
Q psy17793 230 GILVYCTC-SLSVEENEAVIAWILHRHP-EVELVQ 262 (397)
Q Consensus 230 G~lvysTC-S~~~eEnE~vV~~~L~~~~-~~~l~~ 262 (397)
|+|++... ...+..+++.+..++++++ +++...
T Consensus 181 G~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 181 DYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp CEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEET
T ss_pred CEEEEEeCcccccccCHHHHHHHHHhCcccEEEcc
Confidence 99999643 3334556668889999887 676653
No 99
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.31 E-value=7.5e-12 Score=108.99 Aligned_cols=109 Identities=18% Similarity=0.169 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++.. ...|+++|+|+.+++.++++++.+++ ++++.+.|+...... .....+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-------~~~~~~ 109 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE---GWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPE-------AKAQGE 109 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHH-------HHHTTC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHh-------hhccCC
Confidence 6889999999999999999885 23499999999999999999999998 899999998764210 001124
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc--ccccCCcEEEEEecCCC
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI--PLLKKDGILVYCTCSLS 240 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~--~lLkpgG~lvysTCS~~ 240 (397)
+||+|++|||+. +. . .++++. .. ++|||||.+++++.+..
T Consensus 110 ~~D~i~~~~~~~--~~------------~-----------~~~~~~-----------~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 110 RFTVAFMAPPYA--MD------------L-----------AALFGE-----------LLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CEEEEEECCCTT--SC------------T-----------THHHHH-----------HHHHTCEEEEEEEEEEEETTS
T ss_pred ceEEEEECCCCc--hh------------H-----------HHHHHH-----------HHhhcccCCCcEEEEEeCCcc
Confidence 799999999954 10 1 122333 34 78999999999877644
No 100
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.31 E-value=4.4e-11 Score=112.64 Aligned_cols=126 Identities=12% Similarity=0.139 Sum_probs=98.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+.+|++|||+|||+|..++.+|.. +...+|+|+|+|+.+++.+++|++++|+.+ |++..+|+.... .
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~-----------~ 86 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI-----------E 86 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-----------C
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-----------C
Confidence 467899999999999999998885 345689999999999999999999999976 999999987753 1
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
...+||.|++ .|.| ...+ .+||.. +...|+++|+||.+.-
T Consensus 87 ~~~~~D~Ivi----agmG--------------g~lI-------~~IL~~-----------~~~~L~~~~~lIlq~~---- 126 (244)
T 3gnl_A 87 KKDAIDTIVI----AGMG--------------GTLI-------RTILEE-----------GAAKLAGVTKLILQPN---- 126 (244)
T ss_dssp GGGCCCEEEE----EEEC--------------HHHH-------HHHHHH-----------TGGGGTTCCEEEEEES----
T ss_pred ccccccEEEE----eCCc--------------hHHH-------HHHHHH-----------HHHHhCCCCEEEEEcC----
Confidence 2235999885 1222 1222 567888 8999999999999842
Q ss_pred cccHHHHHHHHHHCCCcEEEe
Q psy17793 242 EENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 242 eEnE~vV~~~L~~~~~~~l~~ 262 (397)
.+++.+..+|.++ +|.++.
T Consensus 127 -~~~~~lr~~L~~~-Gf~i~~ 145 (244)
T 3gnl_A 127 -IAAWQLREWSEQN-NWLITS 145 (244)
T ss_dssp -SCHHHHHHHHHHH-TEEEEE
T ss_pred -CChHHHHHHHHHC-CCEEEE
Confidence 3566777778777 577654
No 101
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=1.5e-11 Score=113.94 Aligned_cols=113 Identities=13% Similarity=0.194 Sum_probs=91.0
Q ss_pred hHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEccccccccc
Q psy17793 73 PSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTS 151 (397)
Q Consensus 73 ~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~ 151 (397)
....+...+++.++++|||+|||+|..+..++.. .++|+++|+++.+++.++++++.+++ .++++...|+....
T Consensus 79 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 153 (248)
T 2yvl_A 79 DSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-- 153 (248)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC--
T ss_pred hHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc--
Confidence 3345556677789999999999999999999987 57999999999999999999999998 67999999987642
Q ss_pred chhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcE
Q psy17793 152 SQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGI 231 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~ 231 (397)
...+.||+|++|+| . . ..++++ +.++|||||+
T Consensus 154 ---------~~~~~~D~v~~~~~--------------~---~-----------~~~l~~-----------~~~~L~~gG~ 185 (248)
T 2yvl_A 154 ---------VPEGIFHAAFVDVR--------------E---P-----------WHYLEK-----------VHKSLMEGAP 185 (248)
T ss_dssp ---------CCTTCBSEEEECSS--------------C---G-----------GGGHHH-----------HHHHBCTTCE
T ss_pred ---------cCCCcccEEEECCc--------------C---H-----------HHHHHH-----------HHHHcCCCCE
Confidence 13357999999887 0 1 223455 7788999999
Q ss_pred EEEEecC
Q psy17793 232 LVYCTCS 238 (397)
Q Consensus 232 lvysTCS 238 (397)
+++.+.+
T Consensus 186 l~~~~~~ 192 (248)
T 2yvl_A 186 VGFLLPT 192 (248)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 9987543
No 102
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=1.3e-11 Score=110.89 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=89.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccch--------
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMND-TGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQ-------- 153 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~-~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~-------- 153 (397)
++++.+|||+|||+|+.+.+++..+++ .++|+|+|+++.+ ...++++..+|+........
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 467889999999999999999998753 6899999999832 24578899999876520000
Q ss_pred -----hhHHH-hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 154 -----IDIER-MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 154 -----~d~~~-~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
..... ..+..++||+|++|+++.-.|.. .........++..+|.. +.++||
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~------------~~d~~~~~~~~~~~l~~-----------~~~~Lk 145 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK------------IDDHLNSCELTLSITHF-----------MEQYIN 145 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH------------HHHHHHHHHHHHHHHHH-----------HHHHEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc------------ccCHHHHHHHHHHHHHH-----------HHHHcc
Confidence 00000 01344689999999864333310 12222223455778888 999999
Q ss_pred CCcEEEEEecCCCccccHHHHHHHHHHC
Q psy17793 228 KDGILVYCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 228 pgG~lvysTCS~~~eEnE~vV~~~L~~~ 255 (397)
|||.++..+.. .++...+...++.+
T Consensus 146 pgG~lv~~~~~---~~~~~~l~~~l~~~ 170 (201)
T 2plw_A 146 IGGTYIVKMYL---GSQTNNLKTYLKGM 170 (201)
T ss_dssp EEEEEEEEEEC---STTHHHHHHHHHTT
T ss_pred CCCEEEEEEeC---CCCHHHHHHHHHHH
Confidence 99999986433 34444455556553
No 103
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=3.9e-12 Score=127.39 Aligned_cols=113 Identities=17% Similarity=0.247 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.+++|++.++++ ++++..|+.... ...
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~-----------~~~ 296 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEAL-----------TEE 296 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTS-----------CTT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcc-----------ccC
Confidence 47889999999999999999985 469999999999999999999999975 899999998763 123
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
++||+|++|||+...+.. . .. ...+++++ +.++|||||+++++++...
T Consensus 297 ~~fD~Ii~npp~~~~~~~-------~----~~-------~~~~~l~~-----------~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAV-------I----LD-------VAQAFVNV-----------AAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CCEEEEEECCCCCTTCSS-------C----CH-------HHHHHHHH-----------HHHHEEEEEEEEEEECTTS
T ss_pred CCeEEEEECCchhhcccc-------c----HH-------HHHHHHHH-----------HHHhcCcCcEEEEEEcCCC
Confidence 689999999996532210 0 01 12567777 9999999999999877654
No 104
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.30 E-value=1e-11 Score=112.12 Aligned_cols=114 Identities=18% Similarity=0.110 Sum_probs=89.6
Q ss_pred HhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhH
Q psy17793 78 GHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 78 ~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~ 156 (397)
...+...++ +|||+|||+|..+..++.. .+.+|+++|+|+.+++.++++++..++. ++++..+|+..+.
T Consensus 37 ~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------- 106 (219)
T 3dlc_A 37 INRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP------- 106 (219)
T ss_dssp HHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-------
T ss_pred HHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-------
Confidence 344555666 9999999999999999987 4579999999999999999999999985 6999999998753
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+..++||+|++.... .... + ..++|++ +.++|||||++++++
T Consensus 107 ----~~~~~~D~v~~~~~l----------~~~~--~-----------~~~~l~~-----------~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 ----IEDNYADLIVSRGSV----------FFWE--D-----------VATAFRE-----------IYRILKSGGKTYIGG 148 (219)
T ss_dssp ----SCTTCEEEEEEESCG----------GGCS--C-----------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ----CCcccccEEEECchH----------hhcc--C-----------HHHHHHH-----------HHHhCCCCCEEEEEe
Confidence 355789999985431 1111 1 1457777 889999999999986
Q ss_pred cCC
Q psy17793 237 CSL 239 (397)
Q Consensus 237 CS~ 239 (397)
...
T Consensus 149 ~~~ 151 (219)
T 3dlc_A 149 GFG 151 (219)
T ss_dssp CCS
T ss_pred ccC
Confidence 443
No 105
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.30 E-value=1.4e-11 Score=116.03 Aligned_cols=116 Identities=17% Similarity=0.246 Sum_probs=91.8
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~ 154 (397)
.+...+.+.++.+|||+|||+|..+..++... +.+|+++|+|+.+++.++++++..|+. ++.+..+|+..+.
T Consensus 52 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----- 124 (273)
T 3bus_A 52 EMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP----- 124 (273)
T ss_dssp HHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-----
Confidence 34455677889999999999999999999864 479999999999999999999999986 5999999997753
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
+..++||+|++.-. ..... +. ..+|++ +.++|||||++++
T Consensus 125 ------~~~~~fD~v~~~~~----------l~~~~--~~-----------~~~l~~-----------~~~~L~pgG~l~i 164 (273)
T 3bus_A 125 ------FEDASFDAVWALES----------LHHMP--DR-----------GRALRE-----------MARVLRPGGTVAI 164 (273)
T ss_dssp ------SCTTCEEEEEEESC----------TTTSS--CH-----------HHHHHH-----------HHTTEEEEEEEEE
T ss_pred ------CCCCCccEEEEech----------hhhCC--CH-----------HHHHHH-----------HHHHcCCCeEEEE
Confidence 34578999997322 11111 01 466777 8999999999999
Q ss_pred EecC
Q psy17793 235 CTCS 238 (397)
Q Consensus 235 sTCS 238 (397)
++..
T Consensus 165 ~~~~ 168 (273)
T 3bus_A 165 ADFV 168 (273)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8754
No 106
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.30 E-value=9.8e-12 Score=115.56 Aligned_cols=134 Identities=13% Similarity=0.115 Sum_probs=97.8
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~ 147 (397)
++.....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.+++++++.|+.+ +++..+|+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 444555566666666788999999999999999999987656899999999999999999999999876 9999999865
Q ss_pred ccccchh----hHHHhhhcc--cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy17793 148 INTSSQI----DIERMKLQK--ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQ 221 (397)
Q Consensus 148 ~~~~~~~----d~~~~~~~~--~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~ 221 (397)
....... ......+.. ++||+|++|.. .... ..+++.
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~-------------------~~~~-------~~~l~~----------- 166 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD-------------------KENY-------PNYYPL----------- 166 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC-------------------GGGH-------HHHHHH-----------
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCC-------------------HHHH-------HHHHHH-----------
Confidence 4210000 000001222 68999999754 1111 245666
Q ss_pred ccccccCCcEEEEEecCC
Q psy17793 222 GIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 222 a~~lLkpgG~lvysTCS~ 239 (397)
+.++|||||++++.++.+
T Consensus 167 ~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 167 ILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHEEEEEEEEEECSSG
T ss_pred HHHHcCCCeEEEEEcccc
Confidence 888999999999987654
No 107
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.29 E-value=9.5e-12 Score=113.49 Aligned_cols=119 Identities=12% Similarity=0.107 Sum_probs=88.2
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEEcccccccc
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-----SIQTHVYDSTRINT 150 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-----~v~~~~~D~~~~~~ 150 (397)
.+...+...++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++...++. ++++..+|+....
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~- 97 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD- 97 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC-
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc-
Confidence 34445555678899999999999999888753 3479999999999999999999888775 7999999985542
Q ss_pred cchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc
Q psy17793 151 SSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG 230 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG 230 (397)
...++||+|++.-. ..... ... ..++|++ +.++|||||
T Consensus 98 ----------~~~~~fD~V~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~LkpgG 135 (219)
T 3jwg_A 98 ----------KRFSGYDAATVIEV----------IEHLD----ENR-------LQAFEKV-----------LFEFTRPQT 135 (219)
T ss_dssp ----------GGGTTCSEEEEESC----------GGGCC----HHH-------HHHHHHH-----------HHTTTCCSE
T ss_pred ----------cccCCCCEEEEHHH----------HHhCC----HHH-------HHHHHHH-----------HHHhhCCCE
Confidence 34568999997321 11111 111 1567777 899999999
Q ss_pred EEEEEecC
Q psy17793 231 ILVYCTCS 238 (397)
Q Consensus 231 ~lvysTCS 238 (397)
.++...+.
T Consensus 136 ~~i~~~~~ 143 (219)
T 3jwg_A 136 VIVSTPNK 143 (219)
T ss_dssp EEEEEEBG
T ss_pred EEEEccch
Confidence 77765443
No 108
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.29 E-value=3.5e-12 Score=130.06 Aligned_cols=161 Identities=16% Similarity=0.060 Sum_probs=115.1
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcC------------CCcEEEEEeCCHHHHHHHHHHHH
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMN------------DTGTLIALDKSKPRVTKLEETIK 131 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~------------~~~~V~avD~s~~rl~~l~~n~~ 131 (397)
.|.++....-+.+++.++.+.++.+|||.|||+|++++.++..+. ....++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 466676666677788888999999999999999999999887652 12579999999999999999999
Q ss_pred HhCCC--cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcc--cccccCccchHHHHHHHHHHHHHH
Q psy17793 132 KLQLS--SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPM--FYNANSFLNLDKKIKSYANIQKKL 207 (397)
Q Consensus 132 ~~g~~--~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~--~~~~~s~~~~~~~~~~l~~~Q~~l 207 (397)
..|+. ++.+.++|+.... ...+||+|++|||+++...... ....... . ....+..+
T Consensus 230 l~g~~~~~~~i~~gD~l~~~------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~---~-----~~~~~~~f 289 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKE------------PSTLVDVILANPPFGTRPAGSVDINRPDFYV---E-----TKNNQLNF 289 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSC------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSS---C-----CSCHHHHH
T ss_pred HhCCCcCCCCEeeCCCCCCc------------ccCCcCEEEECCCCCCcccccchhhHhhcCC---C-----CcchHHHH
Confidence 99986 6788899987652 1247999999999988653111 0000000 0 01123567
Q ss_pred HHHHhhhhccccccccccccCCcEEEEEecC--CCccccHH-HHHHHHHHC
Q psy17793 208 LQAVYRFVSLFDWQGIPLLKKDGILVYCTCS--LSVEENEA-VIAWILHRH 255 (397)
Q Consensus 208 L~~~~~f~~~~~~~a~~lLkpgG~lvysTCS--~~~eEnE~-vV~~~L~~~ 255 (397)
+++ +.++|||||++++.++. +.....+. +.+++++++
T Consensus 290 l~~-----------~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~ 329 (445)
T 2okc_A 290 LQH-----------MMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF 329 (445)
T ss_dssp HHH-----------HHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE
T ss_pred HHH-----------HHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcC
Confidence 788 89999999999988764 22222333 444566654
No 109
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=2.4e-12 Score=120.58 Aligned_cols=123 Identities=17% Similarity=0.167 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh---CCCc----------------------
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKL---QLSS---------------------- 137 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~---g~~~---------------------- 137 (397)
.++.+|||+|||+|..+..++..+ ....+|+|+|+|+.+++.+++++..+ ++.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 467799999999999999999863 23568999999999999999999877 5532
Q ss_pred ----EE-------------EEEcccccccccchhhHHHhhh-cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHH
Q psy17793 138 ----IQ-------------THVYDSTRINTSSQIDIERMKL-QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKS 199 (397)
Q Consensus 138 ----v~-------------~~~~D~~~~~~~~~~d~~~~~~-~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~ 199 (397)
++ +.++|+...... ... ...+||+|++|||+..... +. . ..
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~-------~~~~~~~~fD~Iv~npp~~~~~~-------~~----~---~~ 188 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRAL-------SAVLAGSAPDVVLTDLPYGERTH-------WE----G---QV 188 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGH-------HHHHTTCCCSEEEEECCGGGSSS-------SS----S---CC
T ss_pred hhhhhhhhccccccccccceeeccccccccc-------ccccCCCCceEEEeCCCeecccc-------cc----c---cc
Confidence 56 888988764200 000 2247999999999643221 10 0 00
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 200 YANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 200 l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
-......++++ +.++|||||+++++.++
T Consensus 189 ~~~~~~~~l~~-----------~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 189 PGQPVAGLLRS-----------LASALPAHAVIAVTDRS 216 (250)
T ss_dssp CHHHHHHHHHH-----------HHHHSCTTCEEEEEESS
T ss_pred cccHHHHHHHH-----------HHHhcCCCcEEEEeCcc
Confidence 11223677888 89999999999996554
No 110
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=113.96 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=86.6
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
+.++++++|||+|||+|..+.+++...++.++|+|+|+|+.+++.+.+++++. .++++..+|+..... .+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~--------~~ 142 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHK--------YR 142 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGG--------GG
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhh--------hc
Confidence 45678999999999999999999998755689999999999999998888876 679999999976420 11
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+..++||+|++|+| . ... ...++.+ +.++|||||+++.+.
T Consensus 143 ~~~~~~D~V~~~~~--~----------------~~~-------~~~~~~~-----------~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 143 MLIAMVDVIFADVA--Q----------------PDQ-------TRIVALN-----------AHTFLRNGGHFVISI 182 (233)
T ss_dssp GGCCCEEEEEECCC--C----------------TTH-------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ccCCcEEEEEEcCC--C----------------ccH-------HHHHHHH-----------HHHHcCCCeEEEEEE
Confidence 23568999999987 0 011 1345666 888999999999853
No 111
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=3.6e-11 Score=122.22 Aligned_cols=89 Identities=25% Similarity=0.347 Sum_probs=75.3
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
..+.+.++++|||+|||+|..+..+|.. ..+|+|+|+|+.+++.+++|++.+|++|++++.+|+......
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~------- 349 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK------- 349 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS-------
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh-------
Confidence 4456678899999999999999999885 579999999999999999999999999999999999874311
Q ss_pred hhhcccCccEEEEcCCCCC
Q psy17793 159 MKLQKESFDRILLDAPCSG 177 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg 177 (397)
.++..++||+|++|||++|
T Consensus 350 ~~~~~~~fD~Vv~dPPr~g 368 (433)
T 1uwv_A 350 QPWAKNGFDKVLLDPARAG 368 (433)
T ss_dssp SGGGTTCCSEEEECCCTTC
T ss_pred hhhhcCCCCEEEECCCCcc
Confidence 1133467999999999766
No 112
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.28 E-value=1.6e-11 Score=111.62 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=89.9
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRIN 149 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~ 149 (397)
+..-..++...+...++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++++...+ ++++..+|+....
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFS 110 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCC
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCC
Confidence 3334445555677778889999999999999988875 3689999999999999999887654 7999999998763
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
..++||+|++... ..... + ... ..++|++ +.++||||
T Consensus 111 ------------~~~~fD~v~~~~~----------l~~~~--~-~~~-------~~~~l~~-----------~~~~L~pg 147 (216)
T 3ofk_A 111 ------------TAELFDLIVVAEV----------LYYLE--D-MTQ-------MRTAIDN-----------MVKMLAPG 147 (216)
T ss_dssp ------------CSCCEEEEEEESC----------GGGSS--S-HHH-------HHHHHHH-----------HHHTEEEE
T ss_pred ------------CCCCccEEEEccH----------HHhCC--C-HHH-------HHHHHHH-----------HHHHcCCC
Confidence 3478999998432 11111 0 111 1466777 89999999
Q ss_pred cEEEEEe
Q psy17793 230 GILVYCT 236 (397)
Q Consensus 230 G~lvysT 236 (397)
|.+++++
T Consensus 148 G~l~~~~ 154 (216)
T 3ofk_A 148 GHLVFGS 154 (216)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9999986
No 113
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=1.5e-11 Score=111.93 Aligned_cols=99 Identities=23% Similarity=0.283 Sum_probs=79.4
Q ss_pred CcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcc
Q psy17793 65 SMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYD 144 (397)
Q Consensus 65 g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D 144 (397)
+..+.+......+...+.+.++.+|||+|||+|..+..++...+..++|+++|+++.+++.++++++..|+.++++...|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 57 GQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred CcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 44444444444555667788999999999999999999999875557999999999999999999999999899999999
Q ss_pred cccccccchhhHHHhhhcccCccEEEEcCC
Q psy17793 145 STRINTSSQIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 145 ~~~~~~~~~~d~~~~~~~~~~fD~Il~DpP 174 (397)
+.... ...+.||+|+++.+
T Consensus 137 ~~~~~-----------~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 137 GTLGY-----------EPLAPYDRIYTTAA 155 (215)
T ss_dssp GGGCC-----------GGGCCEEEEEESSB
T ss_pred cccCC-----------CCCCCeeEEEECCc
Confidence 85432 12467999999765
No 114
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.28 E-value=1.1e-11 Score=115.70 Aligned_cols=115 Identities=20% Similarity=0.167 Sum_probs=88.9
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...+.+.++.+|||+|||+|..+..++... +.+|+|+|+|+.+++.+++++... .++++...|+....
T Consensus 47 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~------- 115 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKE------- 115 (266)
T ss_dssp HTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCC-------
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCC-------
Confidence 3445567889999999999999999999975 469999999999999999887655 67999999998752
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+..++||+|++.-. ..... ... ...+|++ +.++|||||++++++
T Consensus 116 ----~~~~~fD~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 116 ----FPENNFDLIYSRDA----------ILALS----LEN-------KNKLFQK-----------CYKWLKPTGTLLITD 159 (266)
T ss_dssp ----CCTTCEEEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ----CCCCcEEEEeHHHH----------HHhcC----hHH-------HHHHHHH-----------HHHHcCCCCEEEEEE
Confidence 34578999998322 11111 111 1567777 899999999999987
Q ss_pred cC
Q psy17793 237 CS 238 (397)
Q Consensus 237 CS 238 (397)
..
T Consensus 160 ~~ 161 (266)
T 3ujc_A 160 YC 161 (266)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 115
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.28 E-value=2.9e-12 Score=124.14 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=75.9
Q ss_pred EEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccc
Q psy17793 67 GILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDST 146 (397)
Q Consensus 67 ~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~ 146 (397)
|..++.....+...+++.++++|||+|||+|..|..++.. .++|+|+|+|+.+++.++++++..+..+++++.+|+.
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 4445555666677788889999999999999999988874 4699999999999999999999888888999999998
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCC
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCS 176 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCS 176 (397)
... ...||.|++|+|+.
T Consensus 101 ~~~-------------~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 101 KTV-------------FPKFDVCTANIPYK 117 (299)
T ss_dssp SSC-------------CCCCSEEEEECCGG
T ss_pred hCC-------------cccCCEEEEcCCcc
Confidence 752 24799999999954
No 116
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.27 E-value=1.2e-11 Score=113.49 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=74.2
Q ss_pred HHHhcc--CCCCCCeEEEEcCCCChHHHHHHHHcC----CCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEEcc
Q psy17793 76 LAGHYL--DVQPGQKVLDMCAAPGNKLTHIALLMN----DTGTLIALDKSKPRVTKLEETIKKLQ-----LSSIQTHVYD 144 (397)
Q Consensus 76 l~~~~L--~~~~g~~VLDlcagpG~kt~~lA~~~~----~~~~V~avD~s~~rl~~l~~n~~~~g-----~~~v~~~~~D 144 (397)
.+...+ .++++.+|||+|||+|..+..++...+ +.++|+++|+++.+++.+++++++.+ ..++++..+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 334445 478899999999999999999999865 45799999999999999999999998 6789999999
Q ss_pred cccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 145 STRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 145 ~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
+...... .....+.||+|++++++
T Consensus 149 ~~~~~~~-------~~~~~~~fD~I~~~~~~ 172 (227)
T 2pbf_A 149 IYQVNEE-------EKKELGLFDAIHVGASA 172 (227)
T ss_dssp GGGCCHH-------HHHHHCCEEEEEECSBB
T ss_pred hHhcccc-------cCccCCCcCEEEECCch
Confidence 8764200 00123679999998874
No 117
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.27 E-value=9.2e-11 Score=109.72 Aligned_cols=85 Identities=9% Similarity=0.108 Sum_probs=69.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEccccc-ccccchhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTR-INTSSQIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~-~~~~~~~d~~~~~~~ 162 (397)
++.+|||+|||+|..+..++... +..+|+|+|+|+.+++.+++|++.+++.+ ++++++|+.. +... +.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------~~ 134 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA---------LK 134 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT---------ST
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh---------hh
Confidence 57799999999999999998865 34799999999999999999999999875 9999999765 2111 22
Q ss_pred ---ccCccEEEEcCCCCCCC
Q psy17793 163 ---KESFDRILLDAPCSGFG 179 (397)
Q Consensus 163 ---~~~fD~Il~DpPCSg~G 179 (397)
.++||+|++|||+...+
T Consensus 135 ~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 135 EESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp TCCSCCBSEEEECCCCC---
T ss_pred cccCCcccEEEECCCCccCc
Confidence 25799999999997655
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.27 E-value=1.9e-11 Score=106.01 Aligned_cols=132 Identities=16% Similarity=0.112 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+.++.+|||+|||+|..+..++..++...+|+++|+++ +++ ..++++...|+...... +.....+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~---~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVM---KALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHH---HHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhh---hhhhccCC
Confidence 57889999999999999999999865568999999999 543 25789999998764200 00000134
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|++|+|+...+.. ..........+..+++. +.++|||||.++.++.. .
T Consensus 86 ~~~~D~i~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~-----------~~~~L~~gG~l~~~~~~---~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTP------------AVDIPRAMYLVELALEM-----------CRDVLAPGGSFVVKVFQ---G 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCH------------HHHHHHHHHHHHHHHHH-----------HHHHEEEEEEEEEEEES---S
T ss_pred CCceeEEEECCCccccCCC------------ccchHHHHHHHHHHHHH-----------HHHHcCCCcEEEEEEec---C
Confidence 4689999999997665421 11122223344778888 99999999999987543 3
Q ss_pred ccHHHHHHHHHH
Q psy17793 243 ENEAVIAWILHR 254 (397)
Q Consensus 243 EnE~vV~~~L~~ 254 (397)
++...+...++.
T Consensus 140 ~~~~~~~~~~~~ 151 (180)
T 1ej0_A 140 EGFDEYLREIRS 151 (180)
T ss_dssp TTHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 344444445544
No 119
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.27 E-value=2.6e-11 Score=113.35 Aligned_cols=141 Identities=17% Similarity=0.165 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------hCCCcEEEEEcccccccccchhhHH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKK------LQLSSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~------~g~~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
.++.+|||+|||+|..+..+|... +...|+|+|+|+.+++.++++++. .+..||+++.+|+.....
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~------- 116 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP------- 116 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH-------
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh-------
Confidence 456799999999999999999864 457999999999999999998875 467889999999976321
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
..+..++||.|++.-|. |..... ..... -.+..+|+. +.++|||||.|+++|+
T Consensus 117 -~~~~~~~~D~v~~~~~d------p~~k~~-------h~krr--~~~~~~l~~-----------~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 117 -NFFYKGQLTKMFFLFPD------PHFKRT-------KHKWR--IISPTLLAE-----------YAYVLRVGGLVYTITD 169 (235)
T ss_dssp -HHCCTTCEEEEEEESCC--------------------------CCCHHHHHH-----------HHHHEEEEEEEEEEES
T ss_pred -hhCCCcCeeEEEEeCCC------chhhhh-------hhhhh--hhhHHHHHH-----------HHHHCCCCCEEEEEeC
Confidence 11345789999986541 111100 00000 012467787 8999999999999875
Q ss_pred CCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 238 SLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 238 S~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
. ++.-+.+...+..++.++.+.
T Consensus 170 ~---~~~~~~~~~~l~~~~~f~~~~ 191 (235)
T 3ckk_A 170 V---LELHDWMCTHFEEHPLFERVP 191 (235)
T ss_dssp C---HHHHHHHHHHHHTSTTEEEEC
T ss_pred C---HHHHHHHHHHHHHCCCccccC
Confidence 3 222223344456676666654
No 120
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.27 E-value=3.9e-11 Score=106.99 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=89.2
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
.+...+...++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++++..+++++++...|+....
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------ 93 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT------ 93 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC------
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC------
Confidence 4445666677889999999999999999885 4699999999999999999999999888999999987752
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+ .++||+|++... ..... ... ..++|++ +.++|||||.+++.
T Consensus 94 -----~-~~~~D~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 94 -----F-DRQYDFILSTVV----------LMFLE----AKT-------IPGLIAN-----------MQRCTKPGGYNLIV 135 (199)
T ss_dssp -----C-CCCEEEEEEESC----------GGGSC----GGG-------HHHHHHH-----------HHHTEEEEEEEEEE
T ss_pred -----C-CCCceEEEEcch----------hhhCC----HHH-------HHHHHHH-----------HHHhcCCCeEEEEE
Confidence 3 568999998543 11111 011 1556777 88999999998775
Q ss_pred e
Q psy17793 236 T 236 (397)
Q Consensus 236 T 236 (397)
+
T Consensus 136 ~ 136 (199)
T 2xvm_A 136 A 136 (199)
T ss_dssp E
T ss_pred E
Confidence 4
No 121
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.26 E-value=3.6e-12 Score=118.89 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=85.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..+|.+|||+|||+|..+.++++. ...+|+++|+|+.+++.++++.+..+. +++++.+|+.... ..+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~--~~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~---------~~~~ 125 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVA---------PTLP 125 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTS--CEEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHG---------GGSC
T ss_pred ccCCCeEEEECCCccHHHHHHHHh--CCcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhc---------cccc
Confidence 367899999999999999988874 346899999999999999999888764 5788888886653 2256
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
.++||.|+.|+.-+... ...+.. ...++++ +.++|||||+|+|.+
T Consensus 126 ~~~FD~i~~D~~~~~~~-----------------~~~~~~-~~~~~~e-----------~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEE-----------------TWHTHQ-FNFIKNH-----------AFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTCEEEEEECCCCCBGG-----------------GTTTHH-HHHHHHT-----------HHHHEEEEEEEEECC
T ss_pred ccCCceEEEeeeecccc-----------------hhhhcc-hhhhhhh-----------hhheeCCCCEEEEEe
Confidence 67899999998632210 111111 1566777 999999999999864
No 122
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.26 E-value=1.3e-11 Score=113.46 Aligned_cols=109 Identities=19% Similarity=0.271 Sum_probs=85.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+.++++|||+|||+|..+..++..+++.++|+|+|+|+.+++.+++++++. .+++++.+|+...... ...
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~--------~~~ 140 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEY--------RAL 140 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGG--------TTT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchh--------hcc
Confidence 678999999999999999999998765689999999999999999998766 6899999998764200 012
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
.++||+|++|+|- ... ...++.+ +.++|||||+++++.+
T Consensus 141 ~~~~D~v~~~~~~------------------~~~-------~~~~l~~-----------~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 141 VPKVDVIFEDVAQ------------------PTQ-------AKILIDN-----------AEVYLKRGGYGMIAVK 179 (227)
T ss_dssp CCCEEEEEECCCS------------------TTH-------HHHHHHH-----------HHHHEEEEEEEEEEEE
T ss_pred cCCceEEEECCCC------------------HhH-------HHHHHHH-----------HHHhcCCCCEEEEEEe
Confidence 3579999999870 010 1334666 8899999999998743
No 123
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.26 E-value=2.2e-11 Score=116.99 Aligned_cols=123 Identities=16% Similarity=0.213 Sum_probs=92.2
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhh
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d 155 (397)
+...+.++++.+|||+|||+|..+..++...+ .+|+|+|+|+.+++.++++++..|+. ++++..+|+..+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------- 134 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------- 134 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-------
Confidence 45566788999999999999999999998753 78999999999999999999999987 699999998653
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
.++||+|++.-.-... ..|+. ... .+. ...+|++ +.++|||||++++.
T Consensus 135 -------~~~fD~v~~~~~~~~~-~d~~~--~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 135 -------DEPVDRIVSLGAFEHF-ADGAG--DAG----FER-------YDTFFKK-----------FYNLTPDDGRMLLH 182 (302)
T ss_dssp -------CCCCSEEEEESCGGGT-TCCSS--CCC----TTH-------HHHHHHH-----------HHHSSCTTCEEEEE
T ss_pred -------CCCccEEEEcchHHhc-Ccccc--ccc----hhH-------HHHHHHH-----------HHHhcCCCcEEEEE
Confidence 3689999974320000 00000 000 011 1566777 89999999999998
Q ss_pred ecCCC
Q psy17793 236 TCSLS 240 (397)
Q Consensus 236 TCS~~ 240 (397)
+.+..
T Consensus 183 ~~~~~ 187 (302)
T 3hem_A 183 TITIP 187 (302)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 77644
No 124
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.26 E-value=2.2e-11 Score=117.86 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=93.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEEcccccccccchhhHHH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ-----LSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g-----~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
.+..+|||+|||+|+.+..++.. .+..+|+++|+|+..++.+++++...+ -.+++++.+|+......
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C-------
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh-------
Confidence 34679999999999999988875 345789999999999999999998763 34699999999876421
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
..++||+|++|++... + | ...+ ...++++. +.++|||||+++..++|
T Consensus 154 ---~~~~fDvIi~D~~~p~-~--~-----------~~~l-----~~~~f~~~-----------~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 154 ---TSQTFDVIISDCTDPI-G--P-----------GESL-----FTSAFYEG-----------CKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ---CCCCEEEEEECC-----------------------------CCHHHHHH-----------HHHTEEEEEEEEEEEEE
T ss_pred ---cCCCccEEEECCCCcc-C--c-----------chhc-----cHHHHHHH-----------HHHhcCCCCEEEEecCC
Confidence 3468999999987210 0 0 0000 11456777 88999999999988765
Q ss_pred C--CccccHHHHHHHHHHCCCcEE
Q psy17793 239 L--SVEENEAVIAWILHRHPEVEL 260 (397)
Q Consensus 239 ~--~~eEnE~vV~~~L~~~~~~~l 260 (397)
. .++....+++.+-+.++.+..
T Consensus 201 ~~~~~~~~~~~~~~l~~~F~~v~~ 224 (294)
T 3adn_A 201 CFLQQEEAIDSHRKLSHYFSDVGF 224 (294)
T ss_dssp CSSCCHHHHHHHHHHHHHCSEEEE
T ss_pred cccchHHHHHHHHHHHHHCCCeEE
Confidence 3 333344455555555654433
No 125
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.26 E-value=2.9e-11 Score=108.05 Aligned_cols=132 Identities=22% Similarity=0.181 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCC--------cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-Ecccccccccch
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDT--------GTLIALDKSKPRVTKLEETIKKLQLSSIQTH-VYDSTRINTSSQ 153 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~--------~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~-~~D~~~~~~~~~ 153 (397)
++++++|||+|||+|..+..++..++.. ++|+|+|+|+.+ .+.++++. .+|+......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~-- 86 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTS-- 86 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHH--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHH--
Confidence 5678999999999999999999987543 799999999842 34568888 8887653100
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
+.....+..++||+|++|.++..+|. +. .........+..+++. +.++|||||+++
T Consensus 87 -~~~~~~~~~~~fD~V~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~l~~-----------~~~~LkpgG~lv 142 (196)
T 2nyu_A 87 -QRILEVLPGRRADVILSDMAPNATGF-------RD-----LDHDRLISLCLTLLSV-----------TPDILQPGGTFL 142 (196)
T ss_dssp -HHHHHHSGGGCEEEEEECCCCCCCSC-------HH-----HHHHHHHHHHHHHHHH-----------HHHHEEEEEEEE
T ss_pred -HHHHHhcCCCCCcEEEeCCCCCCCCC-------cc-----cCHHHHHHHHHHHHHH-----------HHHHhcCCCEEE
Confidence 00001123458999999986544332 10 1111223344678888 999999999999
Q ss_pred EEecCCCccccHHHHHHHHHH
Q psy17793 234 YCTCSLSVEENEAVIAWILHR 254 (397)
Q Consensus 234 ysTCS~~~eEnE~vV~~~L~~ 254 (397)
..++. .++.+++.. .++.
T Consensus 143 ~~~~~--~~~~~~~~~-~l~~ 160 (196)
T 2nyu_A 143 CKTWA--GSQSRRLQR-RLTE 160 (196)
T ss_dssp EEECC--SGGGHHHHH-HHHH
T ss_pred EEecC--CccHHHHHH-HHHH
Confidence 98653 333344443 4443
No 126
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.26 E-value=1.5e-11 Score=114.01 Aligned_cols=100 Identities=11% Similarity=0.210 Sum_probs=80.9
Q ss_pred cCCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q psy17793 62 LDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH 141 (397)
Q Consensus 62 ~~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~ 141 (397)
+..|....+......+...+.+.++++|||+|||+|..+..++...+ .+|+++|+++.+++.++++++.+|+.++++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~ 145 (235)
T 1jg1_A 68 IPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVI 145 (235)
T ss_dssp CSTTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEE
Confidence 34566666665566666777888999999999999999999999864 7899999999999999999999999889999
Q ss_pred EcccccccccchhhHHHhhhcccCccEEEEcCC
Q psy17793 142 VYDSTRINTSSQIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 142 ~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpP 174 (397)
.+|+.... .....||+|+++.+
T Consensus 146 ~~d~~~~~-----------~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 146 LGDGSKGF-----------PPKAPYDVIIVTAG 167 (235)
T ss_dssp ESCGGGCC-----------GGGCCEEEEEECSB
T ss_pred ECCcccCC-----------CCCCCccEEEECCc
Confidence 99973221 01235999999765
No 127
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=8.6e-12 Score=114.95 Aligned_cols=98 Identities=13% Similarity=0.209 Sum_probs=76.3
Q ss_pred EEEechhHHHHHhcc--CCCCCCeEEEEcCCCChHHHHHHHHcCC-----CcEEEEEeCCHHHHHHHHHHHHHhC-----
Q psy17793 67 GILQNLPSILAGHYL--DVQPGQKVLDMCAAPGNKLTHIALLMND-----TGTLIALDKSKPRVTKLEETIKKLQ----- 134 (397)
Q Consensus 67 ~~~Qd~~S~l~~~~L--~~~~g~~VLDlcagpG~kt~~lA~~~~~-----~~~V~avD~s~~rl~~l~~n~~~~g----- 134 (397)
.+.|..........+ .++++++|||+|||+|..+..++...+. .++|+++|+++.+++.+++++++.+
T Consensus 64 ~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 143 (227)
T 1r18_A 64 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLD 143 (227)
T ss_dssp EECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccC
Confidence 333444334444555 4788999999999999999999987642 3699999999999999999999887
Q ss_pred CCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 135 LSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 135 ~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
..++++...|+.... ...+.||+|++++++
T Consensus 144 ~~~v~~~~~d~~~~~-----------~~~~~fD~I~~~~~~ 173 (227)
T 1r18_A 144 SGQLLIVEGDGRKGY-----------PPNAPYNAIHVGAAA 173 (227)
T ss_dssp HTSEEEEESCGGGCC-----------GGGCSEEEEEECSCB
T ss_pred CCceEEEECCcccCC-----------CcCCCccEEEECCch
Confidence 678999999987631 112679999998873
No 128
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.25 E-value=1.2e-11 Score=121.77 Aligned_cols=127 Identities=20% Similarity=0.198 Sum_probs=98.2
Q ss_pred chhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccc
Q psy17793 71 NLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINT 150 (397)
Q Consensus 71 d~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~ 150 (397)
|..+.++...+.+.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.++++++.+++. +++...|+...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~-- 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSE-- 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTT--
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEcccccc--
Confidence 3456666677766678899999999999999999873 4568999999999999999999999875 57788887653
Q ss_pred cchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc
Q psy17793 151 SSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG 230 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG 230 (397)
..++||.|+++||..- | ..... ....+++++ +.++|||||
T Consensus 258 -----------~~~~fD~Iv~~~~~~~-g-------------~~~~~----~~~~~~l~~-----------~~~~LkpgG 297 (343)
T 2pjd_A 258 -----------VKGRFDMIISNPPFHD-G-------------MQTSL----DAAQTLIRG-----------AVRHLNSGG 297 (343)
T ss_dssp -----------CCSCEEEEEECCCCCS-S-------------SHHHH----HHHHHHHHH-----------HGGGEEEEE
T ss_pred -----------ccCCeeEEEECCCccc-C-------------ccCCH----HHHHHHHHH-----------HHHhCCCCc
Confidence 2468999999998421 0 01111 122677888 999999999
Q ss_pred EEEEEecCCCc
Q psy17793 231 ILVYCTCSLSV 241 (397)
Q Consensus 231 ~lvysTCS~~~ 241 (397)
.+++.+.+..+
T Consensus 298 ~l~i~~~~~~~ 308 (343)
T 2pjd_A 298 ELRIVANAFLP 308 (343)
T ss_dssp EEEEEEETTSS
T ss_pred EEEEEEcCCCC
Confidence 99998877554
No 129
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.25 E-value=3.4e-11 Score=114.41 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.6
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhh
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d 155 (397)
+...+.+.++.+|||+|||+|..+..++... +.+|+++|+|+.+++.+++++++.|+. ++++...|+..+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------- 126 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF------- 126 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-------
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-------
Confidence 4455667889999999999999999999654 349999999999999999999988874 699999998654
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+ ++||+|++.-. ..... .. ....+|++ +.++|||||+++.+
T Consensus 127 ------~-~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 127 ------D-EPVDRIVSIGA----------FEHFG----HE-------RYDAFFSL-----------AHRLLPADGVMLLH 167 (287)
T ss_dssp ------C-CCCSEEEEESC----------GGGTC----TT-------THHHHHHH-----------HHHHSCTTCEEEEE
T ss_pred ------C-CCeeEEEEeCc----------hhhcC----hH-------HHHHHHHH-----------HHHhcCCCCEEEEE
Confidence 2 68999997321 11111 00 11566777 88999999999998
Q ss_pred ecCC
Q psy17793 236 TCSL 239 (397)
Q Consensus 236 TCS~ 239 (397)
+...
T Consensus 168 ~~~~ 171 (287)
T 1kpg_A 168 TITG 171 (287)
T ss_dssp EEEE
T ss_pred EecC
Confidence 7553
No 130
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.25 E-value=3.2e-11 Score=110.96 Aligned_cols=111 Identities=15% Similarity=0.216 Sum_probs=87.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++...+ ++++..+|+.... +.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~-----------~~ 107 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYD-----------FE 107 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCC-----------CC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccC-----------CC
Confidence 5678899999999999999999975 46799999999999999999887665 7999999998763 23
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
++||+|++... ..... .. ...++|++ +.++|||||++++++....
T Consensus 108 -~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 108 -EKYDMVVSALS----------IHHLE----DE-------DKKELYKR-----------SYSILKESGIFINADLVHG 152 (234)
T ss_dssp -SCEEEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEEEECBC
T ss_pred -CCceEEEEeCc----------cccCC----HH-------HHHHHHHH-----------HHHhcCCCcEEEEEEecCC
Confidence 78999998543 11111 11 11457788 8999999999999876543
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.24 E-value=4.3e-11 Score=108.01 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++... +..+|+++|+|+.+++.++++++.+++.++++...|+.... ..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------------~~~ 131 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP------------SEP 131 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC------------CCS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC------------ccC
Confidence 47899999999999999999875 46799999999999999999999999988999999997652 236
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+||+|+++.- . .. ..++.. +.++|||||.+++....
T Consensus 132 ~~D~i~~~~~--------------~--~~-----------~~~l~~-----------~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 132 PFDGVISRAF--------------A--SL-----------NDMVSW-----------CHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CEEEEECSCS--------------S--SH-----------HHHHHH-----------HTTSEEEEEEEEEEESS
T ss_pred CcCEEEEecc--------------C--CH-----------HHHHHH-----------HHHhcCCCcEEEEEeCC
Confidence 7999997421 0 11 466777 89999999999987443
No 132
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.24 E-value=1.5e-11 Score=117.60 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=88.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
...++.+|||+|||+|..+..++... +.+|+++|+|+.+++.++++++..|+. ++++..+|+..+.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 145 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------- 145 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----------
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----------
Confidence 67889999999999999999999875 359999999999999999999999984 6999999998753
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+..++||+|++.-. ..... . ...+|++ +.++|||||++++++..
T Consensus 146 ~~~~~fD~v~~~~~----------l~~~~---------~----~~~~l~~-----------~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 146 CEDNSYDFIWSQDA----------FLHSP---------D----KLKVFQE-----------CARVLKPRGVMAITDPM 189 (297)
T ss_dssp SCTTCEEEEEEESC----------GGGCS---------C----HHHHHHH-----------HHHHEEEEEEEEEEEEE
T ss_pred CCCCCEeEEEecch----------hhhcC---------C----HHHHHHH-----------HHHHcCCCeEEEEEEec
Confidence 45578999997321 11111 1 1567777 89999999999998753
No 133
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=4.1e-11 Score=121.68 Aligned_cols=81 Identities=17% Similarity=0.287 Sum_probs=70.3
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
++++.++++|||+|||+|..+..+|.. ..+|+|+|+|+.+++.+++|++.+|++ ++++.+|+..+.
T Consensus 285 ~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~---------- 350 (425)
T 2jjq_A 285 VSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS---------- 350 (425)
T ss_dssp HHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC----------
T ss_pred hhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC----------
Confidence 333567889999999999999999884 469999999999999999999999998 999999998763
Q ss_pred hhcccCccEEEEcCCCCC
Q psy17793 160 KLQKESFDRILLDAPCSG 177 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg 177 (397)
. .+||+|++|||.+|
T Consensus 351 --~-~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 351 --V-KGFDTVIVDPPRAG 365 (425)
T ss_dssp --C-TTCSEEEECCCTTC
T ss_pred --c-cCCCEEEEcCCccc
Confidence 1 27999999999655
No 134
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.23 E-value=5.2e-11 Score=105.27 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=93.4
Q ss_pred EechhHHHHHhccCC--CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccc
Q psy17793 69 LQNLPSILAGHYLDV--QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDST 146 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~--~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~ 146 (397)
+..+.+..+...+.. .++.+|||+|||+|..+..++.. . +|+|+|+|+.+++. ..++++.++|+.
T Consensus 5 ~P~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~ 71 (170)
T 3q87_B 5 EPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES---------HRGGNLVRADLL 71 (170)
T ss_dssp CCCHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT---------CSSSCEEECSTT
T ss_pred CcCccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc---------ccCCeEEECChh
Confidence 344455555555665 67889999999999999988874 2 99999999999887 356889999987
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
.. +..++||+|++|||......... .... ... .+++.+ +.+.|
T Consensus 72 ~~------------~~~~~fD~i~~n~~~~~~~~~~~--~~~~----~~~--------~~~~~~-----------~~~~l 114 (170)
T 3q87_B 72 CS------------INQESVDVVVFNPPYVPDTDDPI--IGGG----YLG--------REVIDR-----------FVDAV 114 (170)
T ss_dssp TT------------BCGGGCSEEEECCCCBTTCCCTT--TBCC----GGG--------CHHHHH-----------HHHHC
T ss_pred hh------------cccCCCCEEEECCCCccCCcccc--ccCC----cch--------HHHHHH-----------HHhhC
Confidence 64 23468999999999654321111 0000 011 122333 34444
Q ss_pred cCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecC
Q psy17793 227 KKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 227 kpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
|||++++++.+. .+.+.+..++++. +++...+.
T Consensus 115 -pgG~l~~~~~~~---~~~~~l~~~l~~~-gf~~~~~~ 147 (170)
T 3q87_B 115 -TVGMLYLLVIEA---NRPKEVLARLEER-GYGTRILK 147 (170)
T ss_dssp -CSSEEEEEEEGG---GCHHHHHHHHHHT-TCEEEEEE
T ss_pred -CCCEEEEEEecC---CCHHHHHHHHHHC-CCcEEEEE
Confidence 999999886543 4555667777776 57665543
No 135
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.23 E-value=2.8e-11 Score=111.93 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=84.4
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
+.+.++++|||+|||+|..+.++|...+ .++|+|+|+|+.+++.++++++.. .++.++.+|+...... .+
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~-------~~ 139 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEY-------AN 139 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGG-------TT
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccc-------cc
Confidence 4467889999999999999999999864 679999999999999999998765 6899999998762100 01
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+. +.||+|+.|+|- ... ...+|++ +.++|||||+++.+
T Consensus 140 ~~-~~~D~v~~~~~~------------------~~~-------~~~~l~~-----------~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 140 IV-EKVDVIYEDVAQ------------------PNQ-------AEILIKN-----------AKWFLKKGGYGMIA 177 (230)
T ss_dssp TS-CCEEEEEECCCS------------------TTH-------HHHHHHH-----------HHHHEEEEEEEEEE
T ss_pred cC-ccEEEEEEecCC------------------hhH-------HHHHHHH-----------HHHhCCCCcEEEEE
Confidence 23 679999988751 111 1345667 88899999999886
No 136
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.22 E-value=9.8e-12 Score=118.66 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=94.7
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRIN 149 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~ 149 (397)
.+..+.+...++...++.+|||+|||+|..+..++...+++.+|+|+|+|+.+++.+++++...+. ++++...|+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCC
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcC
Confidence 334445555556777889999999999999999998765567999999999999999999988776 7999999998763
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
+ .++||+|++... ..... . . .++|++ +.++||||
T Consensus 86 -----------~-~~~fD~v~~~~~----------l~~~~---------~---~-~~~l~~-----------~~~~Lkpg 119 (284)
T 3gu3_A 86 -----------L-NDKYDIAICHAF----------LLHMT---------T---P-ETMLQK-----------MIHSVKKG 119 (284)
T ss_dssp -----------C-SSCEEEEEEESC----------GGGCS---------S---H-HHHHHH-----------HHHTEEEE
T ss_pred -----------c-CCCeeEEEECCh----------hhcCC---------C---H-HHHHHH-----------HHHHcCCC
Confidence 2 368999998442 01111 1 1 466777 89999999
Q ss_pred cEEEEEecC
Q psy17793 230 GILVYCTCS 238 (397)
Q Consensus 230 G~lvysTCS 238 (397)
|.++..+..
T Consensus 120 G~l~~~~~~ 128 (284)
T 3gu3_A 120 GKIICFEPH 128 (284)
T ss_dssp EEEEEEECC
T ss_pred CEEEEEecc
Confidence 999987655
No 137
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.22 E-value=5.8e-11 Score=108.51 Aligned_cols=111 Identities=15% Similarity=0.246 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEEcccccccccchhhHHH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-----SIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-----~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
+++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.+++++...++. ++.+...|+..+.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 96 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--------- 96 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC---------
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC---------
Confidence 47889999999999999999885 469999999999999999999888763 5889999987653
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+..++||+|++... ..... + ... ..++|++ +.++|||||++++++..
T Consensus 97 --~~~~~~D~v~~~~~----------l~~~~--~-~~~-------~~~~l~~-----------~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 97 --FHDSSFDFAVMQAF----------LTSVP--D-PKE-------RSRIIKE-----------VFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp --SCTTCEEEEEEESC----------GGGCC--C-HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEEB
T ss_pred --CCCCceeEEEEcch----------hhcCC--C-HHH-------HHHHHHH-----------HHHHcCCCeEEEEEECC
Confidence 34578999998533 11111 0 111 1467777 89999999999998765
Q ss_pred C
Q psy17793 239 L 239 (397)
Q Consensus 239 ~ 239 (397)
.
T Consensus 144 ~ 144 (235)
T 3sm3_A 144 Q 144 (235)
T ss_dssp C
T ss_pred c
Confidence 4
No 138
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=1.3e-11 Score=114.49 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=85.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+.++.+|||+|||+|..+..++.. ...+|+++|+|+.+++.++++++..+ .+++++.+|+..+. .++.
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~---------~~~~ 125 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVA---------PTLP 125 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHG---------GGSC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhh---------cccC
Confidence 567889999999999999988663 33489999999999999999988877 57999999987652 1245
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
.++||+|++|.- +. . ..... . . ....++++ +.++|||||+|++.+++
T Consensus 126 ~~~fD~V~~d~~--~~-~----~~~~~---~-~-------~~~~~l~~-----------~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 126 DGHFDGILYDTY--PL-S----EETWH---T-H-------QFNFIKNH-----------AFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp TTCEEEEEECCC--CC-B----GGGTT---T-H-------HHHHHHHT-----------HHHHEEEEEEEEECCHH
T ss_pred CCceEEEEECCc--cc-c----hhhhh---h-h-------hHHHHHHH-----------HHHhcCCCeEEEEEecC
Confidence 678999999621 00 0 00000 0 1 11456777 89999999999987554
No 139
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.21 E-value=2.8e-11 Score=114.25 Aligned_cols=115 Identities=19% Similarity=0.214 Sum_probs=91.3
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
++.......++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++...++.++++...|+..+.
T Consensus 28 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------ 100 (276)
T 3mgg_A 28 LLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP------ 100 (276)
T ss_dssp HHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC------
T ss_pred HHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC------
Confidence 33444456789999999999999999999874 46799999999999999999999999999999999998753
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+..++||+|++.-. ..... +. ..+|++ +.++|||||.+++.
T Consensus 101 -----~~~~~fD~v~~~~~----------l~~~~--~~-----------~~~l~~-----------~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 101 -----FEDSSFDHIFVCFV----------LEHLQ--SP-----------EEALKS-----------LKKVLKPGGTITVI 141 (276)
T ss_dssp -----SCTTCEEEEEEESC----------GGGCS--CH-----------HHHHHH-----------HHHHEEEEEEEEEE
T ss_pred -----CCCCCeeEEEEech----------hhhcC--CH-----------HHHHHH-----------HHHHcCCCcEEEEE
Confidence 34578999998432 11111 01 356777 88999999999997
Q ss_pred e
Q psy17793 236 T 236 (397)
Q Consensus 236 T 236 (397)
+
T Consensus 142 ~ 142 (276)
T 3mgg_A 142 E 142 (276)
T ss_dssp E
T ss_pred E
Confidence 5
No 140
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.21 E-value=4.3e-11 Score=119.49 Aligned_cols=116 Identities=17% Similarity=0.230 Sum_probs=89.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-----C-C--CcEEEEEcccccccccchh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-----Q-L--SSIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-----g-~--~~v~~~~~D~~~~~~~~~~ 154 (397)
+.++.+|||+|||+|..+..++...++.++|+++|+|+.+++.++++++++ | . .+++++.+|+..+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~--- 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA--- 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC---
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc---
Confidence 567899999999999999999998766789999999999999999999876 4 3 5799999999875210
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
...++..++||+|+++.. ..... + ...+|++ +.++|||||+|++
T Consensus 158 --~~~~~~~~~fD~V~~~~~----------l~~~~--d-----------~~~~l~~-----------~~r~LkpgG~l~i 201 (383)
T 4fsd_A 158 --EPEGVPDSSVDIVISNCV----------CNLST--N-----------KLALFKE-----------IHRVLRDGGELYF 201 (383)
T ss_dssp --BSCCCCTTCEEEEEEESC----------GGGCS--C-----------HHHHHHH-----------HHHHEEEEEEEEE
T ss_pred --ccCCCCCCCEEEEEEccc----------hhcCC--C-----------HHHHHHH-----------HHHHcCCCCEEEE
Confidence 000245678999998543 11111 0 1567777 9999999999999
Q ss_pred Eec
Q psy17793 235 CTC 237 (397)
Q Consensus 235 sTC 237 (397)
++-
T Consensus 202 ~~~ 204 (383)
T 4fsd_A 202 SDV 204 (383)
T ss_dssp EEE
T ss_pred EEe
Confidence 853
No 141
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.21 E-value=5.5e-11 Score=113.03 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++++..|+ .+++++.+|+..+. .+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 134 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA----------SHLE 134 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG----------GGCS
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh----------hhcC
Confidence 3679999999999999999885 56999999999999999999999998 57999999998763 2356
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
++||+|++.-. ..... . . .++|++ +.++|||||++++++.
T Consensus 135 ~~fD~v~~~~~----------l~~~~---------~---~-~~~l~~-----------~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 135 TPVDLILFHAV----------LEWVA---------D---P-RSVLQT-----------LWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCEEEEEEESC----------GGGCS---------C---H-HHHHHH-----------HHHTEEEEEEEEEEEE
T ss_pred CCceEEEECch----------hhccc---------C---H-HHHHHH-----------HHHHcCCCeEEEEEEe
Confidence 78999998432 11111 1 1 457777 8999999999999865
No 142
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.21 E-value=2.6e-11 Score=116.84 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=88.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
.+.++.+|||+|||+|..+..+|....+..+|+++|+|+.+++.++++++..|+.+ ++++.+|+..+.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 183 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD----------- 183 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-----------
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-----------
Confidence 35788999999999999999886333457799999999999999999999999865 999999998763
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+. ++||+|+++.+. .... + .. ...++|++ +.++|||||++++++.+
T Consensus 184 ~~-~~fD~v~~~~~~----------~~~~--~-~~-------~~~~~l~~-----------~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 TR-EGYDLLTSNGLN----------IYEP--D-DA-------RVTELYRR-----------FWQALKPGGALVTSFLT 229 (305)
T ss_dssp CC-SCEEEEECCSSG----------GGCC--C-HH-------HHHHHHHH-----------HHHHEEEEEEEEEECCC
T ss_pred cc-CCeEEEEECChh----------hhcC--C-HH-------HHHHHHHH-----------HHHhcCCCeEEEEEecC
Confidence 33 789999985531 1110 0 11 12457777 89999999999998643
No 143
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.21 E-value=1.6e-11 Score=128.19 Aligned_cols=162 Identities=12% Similarity=-0.008 Sum_probs=113.1
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCC-----------------cEEEEEeCCHHHHHHH
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDT-----------------GTLIALDKSKPRVTKL 126 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~-----------------~~V~avD~s~~rl~~l 126 (397)
.|.|+-.+.-+.+++.++.+.++.+|||.|||+|++.+.++..+... ..++|+|+++.+++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 47777777777778888999999999999999999999988765321 3799999999999999
Q ss_pred HHHHHHhCCCc-----EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHH
Q psy17793 127 EETIKKLQLSS-----IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYA 201 (397)
Q Consensus 127 ~~n~~~~g~~~-----v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~ 201 (397)
+.|+...|+.+ +.+.++|+.... ......||+|++|||+++..... ...... .+ -.
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~----------~~~~~~fD~Vv~NPPf~~~~~~~-~~~~~~---~~-----~~ 288 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSD----------GENLPKAHIVATNPPFGSAAGTN-ITRTFV---HP-----TS 288 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHH----------HHTSCCEEEEEECCCCTTCSSCC-CCSCCS---SC-----CS
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccc----------cccccCCeEEEECCCcccccchh-hHhhcC---CC-----CC
Confidence 99999888875 788889886541 12346799999999998865211 111110 00 00
Q ss_pred HHHHHHHHHHhhhhccccccccccccCCcEEEEEecC--CCccccHHHH-HHHHHHC
Q psy17793 202 NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS--LSVEENEAVI-AWILHRH 255 (397)
Q Consensus 202 ~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS--~~~eEnE~vV-~~~L~~~ 255 (397)
..+..++.+ +.++||+||++++.+.. +.....+..+ +++++++
T Consensus 289 ~~~~~Fl~~-----------~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~ 334 (541)
T 2ar0_A 289 NKQLCFMQH-----------IIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC 334 (541)
T ss_dssp CHHHHHHHH-----------HHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE
T ss_pred chHHHHHHH-----------HHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC
Confidence 112356777 89999999999887643 2222233444 5555543
No 144
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.20 E-value=1.3e-11 Score=112.43 Aligned_cols=113 Identities=13% Similarity=0.096 Sum_probs=83.1
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh------------CCCcEEEEEcccccc
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL------------QLSSIQTHVYDSTRI 148 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~------------g~~~v~~~~~D~~~~ 148 (397)
+.+.++.+|||+|||+|..+..+|.. +.+|+|+|+|+.+++.++++.+.. +..++++.++|+..+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 45567899999999999999999985 458999999999999998876431 235789999999876
Q ss_pred cccchhhHHHhhhcc-cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 149 NTSSQIDIERMKLQK-ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~-~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
. +.. ++||+|++... ..... .. ...+++++ +.++||
T Consensus 95 ~-----------~~~~~~fD~v~~~~~----------l~~l~----~~-------~~~~~l~~-----------~~r~Lk 131 (203)
T 1pjz_A 95 T-----------ARDIGHCAAFYDRAA----------MIALP----AD-------MRERYVQH-----------LEALMP 131 (203)
T ss_dssp T-----------HHHHHSEEEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHHSC
T ss_pred C-----------cccCCCEEEEEECcc----------hhhCC----HH-------HHHHHHHH-----------HHHHcC
Confidence 3 222 68999996221 00011 11 12456777 899999
Q ss_pred CCcEEEEEecCC
Q psy17793 228 KDGILVYCTCSL 239 (397)
Q Consensus 228 pgG~lvysTCS~ 239 (397)
|||++++.+...
T Consensus 132 pgG~~~l~~~~~ 143 (203)
T 1pjz_A 132 QACSGLLITLEY 143 (203)
T ss_dssp SEEEEEEEEESS
T ss_pred CCcEEEEEEEec
Confidence 999977776554
No 145
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.20 E-value=4.2e-11 Score=110.04 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=91.8
Q ss_pred CCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc
Q psy17793 64 SSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY 143 (397)
Q Consensus 64 ~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~ 143 (397)
.|..+.+......+...+.+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.+++++...+ ++++..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 34444454444556667778899999999999999999999863 799999999999999999998877 8999999
Q ss_pred ccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy17793 144 DSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI 223 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~ 223 (397)
|+.... ...++||+|+++.++.. +. .. +.
T Consensus 124 d~~~~~-----------~~~~~fD~v~~~~~~~~---------------~~--------------~~-----------~~ 152 (231)
T 1vbf_A 124 DGTLGY-----------EEEKPYDRVVVWATAPT---------------LL--------------CK-----------PY 152 (231)
T ss_dssp CGGGCC-----------GGGCCEEEEEESSBBSS---------------CC--------------HH-----------HH
T ss_pred Cccccc-----------ccCCCccEEEECCcHHH---------------HH--------------HH-----------HH
Confidence 987632 12468999999765311 11 12 66
Q ss_pred ccccCCcEEEEEecC
Q psy17793 224 PLLKKDGILVYCTCS 238 (397)
Q Consensus 224 ~lLkpgG~lvysTCS 238 (397)
++|||||++++++.+
T Consensus 153 ~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 153 EQLKEGGIMILPIGV 167 (231)
T ss_dssp HTEEEEEEEEEEECS
T ss_pred HHcCCCcEEEEEEcC
Confidence 789999999998654
No 146
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.19 E-value=7.3e-11 Score=107.57 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++... .+|+++|+|+.+++.++++++..+ .++++..+|+..+. +..
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~-----------~~~ 101 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS-----------FED 101 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC-----------SCT
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCC-----------CCC
Confidence 347899999999999999888852 399999999999999999999888 67999999987652 344
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
++||+|+++++. .... ... ..++|++ +.++|||||++++.++.
T Consensus 102 ~~~D~v~~~~~~----------~~~~----~~~-------~~~~l~~-----------~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSI----------VHFE----PLE-------LNQVFKE-----------VRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCG----------GGCC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCch----------HhCC----HHH-------HHHHHHH-----------HHHHcCCCcEEEEEecC
Confidence 689999997651 0011 111 1567777 89999999999998664
No 147
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.18 E-value=6.7e-11 Score=109.87 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=97.0
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.+...++.+|||+|||+|..+..++... ..+|+++|+|+.+++.+++++... .++++...|+..+.
T Consensus 88 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~---------- 153 (254)
T 1xtp_A 88 SLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETAT---------- 153 (254)
T ss_dssp TSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCC----------
T ss_pred hhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCC----------
Confidence 3455678999999999999999998864 468999999999999999987655 57999999987652
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
+..++||+|++.-. ..... .. ...++|++ +.++|||||++++++...
T Consensus 154 -~~~~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 154 -LPPNTYDLIVIQWT----------AIYLT----DA-------DFVKFFKH-----------CQQALTPNGYIFFKENCS 200 (254)
T ss_dssp -CCSSCEEEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEEEEBC
T ss_pred -CCCCCeEEEEEcch----------hhhCC----HH-------HHHHHHHH-----------HHHhcCCCeEEEEEecCC
Confidence 34568999997321 11111 11 12667788 899999999999987422
Q ss_pred Ccc------------ccHHHHHHHHHHCCCcEEEec
Q psy17793 240 SVE------------ENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 240 ~~e------------EnE~vV~~~L~~~~~~~l~~~ 263 (397)
... -..+.+..++++. +++.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~ 235 (254)
T 1xtp_A 201 TGDRFLVDKEDSSLTRSDIHYKRLFNES-GVRVVKE 235 (254)
T ss_dssp --CCEEEETTTTEEEBCHHHHHHHHHHH-TCCEEEE
T ss_pred CcccceecccCCcccCCHHHHHHHHHHC-CCEEEEe
Confidence 111 1345566666665 4655544
No 148
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.18 E-value=4.8e-11 Score=114.47 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=86.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.++.+|||+|||+|..+..++..+....+|+|+|+|+.+++.++++++.. +..+++++.+|+..+... + ...+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~---~--~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL---G--ADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG---C--TTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc---c--cccc
Confidence 57889999999999999999987646789999999999999999999987 346799999999876310 0 0001
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
..++||+|++.-. + ..+ . ..++|++ +.++|||||.|++.+++
T Consensus 110 ~~~~fD~V~~~~~------------------l-~~~-~----~~~~l~~-----------~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 110 DKQKIDMITAVEC------------------A-HWF-D----FEKFQRS-----------AYANLRKDGTIAIWGYA 151 (299)
T ss_dssp TSSCEEEEEEESC------------------G-GGS-C----HHHHHHH-----------HHHHEEEEEEEEEEEEE
T ss_pred cCCCeeEEeHhhH------------------H-HHh-C----HHHHHHH-----------HHHhcCCCcEEEEEecC
Confidence 1268999998432 0 111 1 1567777 88999999999886554
No 149
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.18 E-value=1e-10 Score=109.02 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=84.3
Q ss_pred HhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHH
Q psy17793 78 GHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 78 ~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
...+...++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++. ..++++..+|+..+.
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~-------- 103 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIA-------- 103 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCC--------
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCC--------
Confidence 34555668899999999999999999885 23499999999999999988765 457999999997653
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
+..++||+|++.-. . ..+.. ..++|++ +.++|||||++++++.
T Consensus 104 ---~~~~~fD~v~~~~~----------l---------~~~~~----~~~~l~~-----------~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 ---IEPDAYNVVLSSLA----------L---------HYIAS----FDDICKK-----------VYINLKSSGSFIFSVE 146 (253)
T ss_dssp ---CCTTCEEEEEEESC----------G---------GGCSC----HHHHHHH-----------HHHHEEEEEEEEEEEE
T ss_pred ---CCCCCeEEEEEchh----------h---------hhhhh----HHHHHHH-----------HHHHcCCCcEEEEEeC
Confidence 34578999998321 0 11111 1567777 8999999999999854
No 150
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.17 E-value=6e-11 Score=107.31 Aligned_cols=113 Identities=12% Similarity=0.136 Sum_probs=86.4
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
+...+....++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.+++ .+..++++..+|+..+
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~------- 102 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW------- 102 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC-------
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC-------
Confidence 3333334677889999999999999999986 4699999999999999987 6777899999999775
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+..++||+|++.-- ..... .. ....+|++ +.++|||||.++++
T Consensus 103 -----~~~~~~D~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 103 -----TPDRQWDAVFFAHW----------LAHVP----DD-------RFEAFWES-----------VRSAVAPGGVVEFV 145 (218)
T ss_dssp -----CCSSCEEEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEE
T ss_pred -----CCCCceeEEEEech----------hhcCC----HH-------HHHHHHHH-----------HHHHcCCCeEEEEE
Confidence 24578999997321 11111 11 12567777 89999999999999
Q ss_pred ecCC
Q psy17793 236 TCSL 239 (397)
Q Consensus 236 TCS~ 239 (397)
+.+.
T Consensus 146 ~~~~ 149 (218)
T 3ou2_A 146 DVTD 149 (218)
T ss_dssp EECC
T ss_pred eCCC
Confidence 7764
No 151
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.17 E-value=1.1e-10 Score=105.17 Aligned_cols=121 Identities=13% Similarity=0.155 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++.. ..++.+..+|+..+. +..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~-----------~~~ 105 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG--GFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLD-----------FPS 105 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT--TCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCC-----------SCS
T ss_pred CCCCeEEEECCCCcHHHHHHHHc--CCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCC-----------CCC
Confidence 67889999999999999998885 223899999999999999998764 357899999987652 345
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
++||+|+++.+....-......+... ..... ...++|++ +.++|||||++++.+.+
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~l~~-----------~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVS----SEGVH----TVDQVLSE-----------VSRVLVPGGRFISMTSA 161 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCC----HHHHH----HHHHHHHH-----------HHHHEEEEEEEEEEESC
T ss_pred CcccEEEECcchhhhccccccccccc----cchhH----HHHHHHHH-----------HHHhCcCCCEEEEEeCC
Confidence 78999998765211000000000001 11222 22677888 99999999999998765
No 152
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.17 E-value=1.9e-10 Score=115.70 Aligned_cols=112 Identities=12% Similarity=0.088 Sum_probs=85.6
Q ss_pred HhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH-------HHhCC--CcEEEEEcccccc
Q psy17793 78 GHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETI-------KKLQL--SSIQTHVYDSTRI 148 (397)
Q Consensus 78 ~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~-------~~~g~--~~v~~~~~D~~~~ 148 (397)
...+.+++|++|||+|||+|..+..+|... +..+|+|+|+++.+++.+++++ +.+|+ .+|+++++|+...
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 345678999999999999999999999865 4457999999999999998765 44676 5799999999876
Q ss_pred cccchhhHHHhhhcc--cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q psy17793 149 NTSSQIDIERMKLQK--ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLL 226 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~--~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lL 226 (397)
. +.. ..||+|+++++|.. +.. .+.|.+ ..+.|
T Consensus 245 p-----------~~d~~~~aDVVf~Nn~~F~----------------pdl--------~~aL~E-----------i~RvL 278 (438)
T 3uwp_A 245 E-----------WRERIANTSVIFVNNFAFG----------------PEV--------DHQLKE-----------RFANM 278 (438)
T ss_dssp H-----------HHHHHHTCSEEEECCTTCC----------------HHH--------HHHHHH-----------HHTTS
T ss_pred c-----------cccccCCccEEEEcccccC----------------chH--------HHHHHH-----------HHHcC
Confidence 2 111 46999999887521 111 233445 77899
Q ss_pred cCCcEEEEEe
Q psy17793 227 KKDGILVYCT 236 (397)
Q Consensus 227 kpgG~lvysT 236 (397)
||||+||.+.
T Consensus 279 KPGGrIVssE 288 (438)
T 3uwp_A 279 KEGGRIVSSK 288 (438)
T ss_dssp CTTCEEEESS
T ss_pred CCCcEEEEee
Confidence 9999998653
No 153
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=1e-09 Score=96.91 Aligned_cols=130 Identities=15% Similarity=0.069 Sum_probs=94.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++ .++.+...|+.... +.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~-----------~~ 104 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQ-----------IS 104 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSC-----------CC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCC-----------CC
Confidence 457889999999999999999885 469999999999999998875 35788899987652 34
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|++++++-. ... ... ..++|+. +.++|||||++++++.....
T Consensus 105 ~~~~D~i~~~~~~~~---------~~~----~~~-------~~~~l~~-----------~~~~l~~~G~l~~~~~~~~~- 152 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMG---------FLA----EDG-------REPALAN-----------IHRALGADGRAVIGFGAGRG- 152 (195)
T ss_dssp CCCEEEEEECCCCGG---------GSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEETTSS-
T ss_pred CCceeEEEECCcHHh---------hcC----hHH-------HHHHHHH-----------HHHHhCCCCEEEEEeCCCCC-
Confidence 568999999755211 111 111 2567777 88999999999987654332
Q ss_pred ccHHHHHHHHHHCCCcEEEecC
Q psy17793 243 ENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 243 EnE~vV~~~L~~~~~~~l~~~~ 264 (397)
...+.+...+++. +++++...
T Consensus 153 ~~~~~~~~~l~~~-Gf~~~~~~ 173 (195)
T 3cgg_A 153 WVFGDFLEVAERV-GLELENAF 173 (195)
T ss_dssp CCHHHHHHHHHHH-TEEEEEEE
T ss_pred cCHHHHHHHHHHc-CCEEeeee
Confidence 3444566666665 57776543
No 154
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.17 E-value=4.1e-11 Score=116.31 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=76.4
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...|.+++|.+|||+|||+|+.+..++...+ .++|+|+|+|+.+++.+++|++.+| .+++++++|+..+...
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~----- 90 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFL----- 90 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHH-----
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHH-----
Confidence 34567788999999999999999999999864 6799999999999999999999988 7899999998765210
Q ss_pred HHhhhcccCccEEEEcCCCCC
Q psy17793 157 ERMKLQKESFDRILLDAPCSG 177 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg 177 (397)
........||.|++|+|||.
T Consensus 91 -l~~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 91 -LKTLGIEKVDGILMDLGVST 110 (301)
T ss_dssp -HHHTTCSCEEEEEEECSCCH
T ss_pred -HHhcCCCCCCEEEEcCccch
Confidence 00011147999999999985
No 155
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.17 E-value=8.4e-11 Score=113.62 Aligned_cols=117 Identities=18% Similarity=0.238 Sum_probs=90.6
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~ 154 (397)
.+...+.+.++.+|||+|||+|..+..++... +.+|+++|+|+.+++.++++++..|+. ++++..+|+..+
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------ 152 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF------ 152 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC------
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC------
Confidence 34455667889999999999999999999875 459999999999999999999999885 499999998654
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
. ++||+|++.-. ..... .. ...++|++ +.++|||||++++
T Consensus 153 -------~-~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 153 -------A-EPVDRIVSIEA----------FEHFG----HE-------NYDDFFKR-----------CFNIMPADGRMTV 192 (318)
T ss_dssp -------C-CCCSEEEEESC----------GGGTC----GG-------GHHHHHHH-----------HHHHSCTTCEEEE
T ss_pred -------C-CCcCEEEEeCh----------HHhcC----HH-------HHHHHHHH-----------HHHhcCCCcEEEE
Confidence 2 57999997422 11111 00 11566777 8899999999999
Q ss_pred EecCCC
Q psy17793 235 CTCSLS 240 (397)
Q Consensus 235 sTCS~~ 240 (397)
.+....
T Consensus 193 ~~~~~~ 198 (318)
T 2fk8_A 193 QSSVSY 198 (318)
T ss_dssp EEEECC
T ss_pred EEeccC
Confidence 877643
No 156
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.17 E-value=9.3e-11 Score=112.44 Aligned_cols=113 Identities=14% Similarity=0.147 Sum_probs=86.2
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEEcccccccccchhh
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL---SSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~---~~v~~~~~D~~~~~~~~~~d 155 (397)
..+...++ +|||+|||+|..+..++.. +.+|+|+|+|+.+++.+++++...+. .+++++++|+..+.
T Consensus 77 ~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~------ 146 (299)
T 3g2m_A 77 TRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA------ 146 (299)
T ss_dssp HHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC------
T ss_pred HhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC------
Confidence 34444444 9999999999999998885 46899999999999999999998875 57999999998763
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHH-HHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYA-NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~-~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
+ .++||.|++.. ..+..+. ....++|++ +.++|||||+|++
T Consensus 147 -----~-~~~fD~v~~~~---------------------~~~~~~~~~~~~~~l~~-----------~~~~L~pgG~l~~ 188 (299)
T 3g2m_A 147 -----L-DKRFGTVVISS---------------------GSINELDEADRRGLYAS-----------VREHLEPGGKFLL 188 (299)
T ss_dssp -----C-SCCEEEEEECH---------------------HHHTTSCHHHHHHHHHH-----------HHHHEEEEEEEEE
T ss_pred -----c-CCCcCEEEECC---------------------cccccCCHHHHHHHHHH-----------HHHHcCCCcEEEE
Confidence 2 57899998611 1111111 122677888 9999999999999
Q ss_pred EecCC
Q psy17793 235 CTCSL 239 (397)
Q Consensus 235 sTCS~ 239 (397)
++...
T Consensus 189 ~~~~~ 193 (299)
T 3g2m_A 189 SLAMS 193 (299)
T ss_dssp EEECC
T ss_pred EeecC
Confidence 97653
No 157
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.17 E-value=2.1e-10 Score=106.35 Aligned_cols=134 Identities=13% Similarity=0.104 Sum_probs=97.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++... ..+|+++|+|+.+++.+++++...+..++++...|+..+. +..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~ 145 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-----------PEPD 145 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-----------CCSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-----------CCCC
Confidence 58899999999999998887753 4689999999999999999988876567899999987653 3445
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc---
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV--- 241 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~--- 241 (397)
+||+|+++-. ..... ... ..++|++ +.++|||||++++++.....
T Consensus 146 ~fD~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~i~~~~~~~~~~ 193 (241)
T 2ex4_A 146 SYDVIWIQWV----------IGHLT----DQH-------LAEFLRR-----------CKGSLRPNGIIVIKDNMAQEGVI 193 (241)
T ss_dssp CEEEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEEEBSSSEE
T ss_pred CEEEEEEcch----------hhhCC----HHH-------HHHHHHH-----------HHHhcCCCeEEEEEEccCCCcce
Confidence 8999998532 11111 111 1567777 89999999999997643211
Q ss_pred --------cccHHHHHHHHHHCCCcEEEecC
Q psy17793 242 --------EENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 242 --------eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
..+.+.+..++++. +++.+...
T Consensus 194 ~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 223 (241)
T 2ex4_A 194 LDDVDSSVCRDLDVVRRIICSA-GLSLLAEE 223 (241)
T ss_dssp EETTTTEEEEBHHHHHHHHHHT-TCCEEEEE
T ss_pred ecccCCcccCCHHHHHHHHHHc-CCeEEEee
Confidence 11456677777776 56666543
No 158
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.16 E-value=1.5e-10 Score=110.06 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=85.9
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.+...++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.+++++...|+ ++++..+|+....
T Consensus 115 ~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~---------- 180 (286)
T 3m70_A 115 AAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN---------- 180 (286)
T ss_dssp HHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC----------
T ss_pred HhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc----------
Confidence 344457889999999999999999885 45999999999999999999999998 8999999998753
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
. .++||+|+++.+. .... ... ...+|++ +.++|||||++++.+
T Consensus 181 -~-~~~fD~i~~~~~~----------~~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 -I-QENYDFIVSTVVF----------MFLN----RER-------VPSIIKN-----------MKEHTNVGGYNLIVA 223 (286)
T ss_dssp -C-CSCEEEEEECSSG----------GGSC----GGG-------HHHHHHH-----------HHHTEEEEEEEEEEE
T ss_pred -c-cCCccEEEEccch----------hhCC----HHH-------HHHHHHH-----------HHHhcCCCcEEEEEE
Confidence 2 5789999996641 1111 111 1467777 889999999977653
No 159
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=1.9e-11 Score=118.81 Aligned_cols=127 Identities=14% Similarity=0.092 Sum_probs=82.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeC----CHHHHHHHHHHHHHhCCCcEEEEEc-ccccccccchhhHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDK----SKPRVTKLEETIKKLQLSSIQTHVY-DSTRINTSSQIDIE 157 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~----s~~rl~~l~~n~~~~g~~~v~~~~~-D~~~~~~~~~~d~~ 157 (397)
.++|.+|||+|||||++|..+|+. ++|+|+|+ ++.+++.+ ..+..+.++|.+..+ |+..+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l--------- 144 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFI--------- 144 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTS---------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccC---------
Confidence 467899999999999999988885 57999999 55443211 112233356888888 88765
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
..++||+|++|.+|+ +|. ....... +..+|.. +.++|||||.++..
T Consensus 145 ----~~~~fD~V~sd~~~~-~g~--------------~~~d~~~--~l~~L~~-----------~~~~LkpGG~~v~k-- 190 (305)
T 2p41_A 145 ----PPERCDTLLCDIGES-SPN--------------PTVEAGR--TLRVLNL-----------VENWLSNNTQFCVK-- 190 (305)
T ss_dssp ----CCCCCSEEEECCCCC-CSS--------------HHHHHHH--HHHHHHH-----------HHHHCCTTCEEEEE--
T ss_pred ----CcCCCCEEEECCccc-cCc--------------chhhHHH--HHHHHHH-----------HHHHhCCCCEEEEE--
Confidence 235899999999876 442 1111110 1135666 88999999998875
Q ss_pred CCCccccH--HHHHHHHHHCCCc
Q psy17793 238 SLSVEENE--AVIAWILHRHPEV 258 (397)
Q Consensus 238 S~~~eEnE--~vV~~~L~~~~~~ 258 (397)
.+.+++.+ +.+..+.+.+..+
T Consensus 191 v~~~~~~~~~~~l~~l~~~f~~v 213 (305)
T 2p41_A 191 VLNPYMSSVIEKMEALQRKHGGA 213 (305)
T ss_dssp ESCCCSHHHHHHHHHHHHHHCCE
T ss_pred eCCCCCchHHHHHHHHHHHcCCE
Confidence 34443322 3444444445443
No 160
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.15 E-value=4.3e-11 Score=114.74 Aligned_cols=113 Identities=18% Similarity=0.225 Sum_probs=85.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C---------CCcEEEEEccccccccc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--Q---------LSSIQTHVYDSTRINTS 151 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g---------~~~v~~~~~D~~~~~~~ 151 (397)
...+.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++ ++ + -.+++++.+|+....
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l-- 147 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFI-- 147 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHH--
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHh--
Confidence 345679999999999999988885 4579999999999999999998 54 3 246999999987652
Q ss_pred chhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcE
Q psy17793 152 SQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGI 231 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~ 231 (397)
.. .++||+|++|+|+.. +. ...+ ...++++. +.++|||||+
T Consensus 148 --------~~-~~~fD~Ii~d~~~~~-~~-------------~~~l-----~~~~~l~~-----------~~~~L~pgG~ 188 (281)
T 1mjf_A 148 --------KN-NRGFDVIIADSTDPV-GP-------------AKVL-----FSEEFYRY-----------VYDALNNPGI 188 (281)
T ss_dssp --------HH-CCCEEEEEEECCCCC-------------------T-----TSHHHHHH-----------HHHHEEEEEE
T ss_pred --------cc-cCCeeEEEECCCCCC-Cc-------------chhh-----hHHHHHHH-----------HHHhcCCCcE
Confidence 11 468999999998421 10 0110 02456677 8899999999
Q ss_pred EEEEecCC
Q psy17793 232 LVYCTCSL 239 (397)
Q Consensus 232 lvysTCS~ 239 (397)
++..+++.
T Consensus 189 lv~~~~~~ 196 (281)
T 1mjf_A 189 YVTQAGSV 196 (281)
T ss_dssp EEEEEEET
T ss_pred EEEEcCCc
Confidence 99987664
No 161
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=1.1e-10 Score=108.69 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=88.2
Q ss_pred echhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccc
Q psy17793 70 QNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRIN 149 (397)
Q Consensus 70 Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~ 149 (397)
|.....-+...+.+.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.++++ ..++.+..+|+..+.
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC
Confidence 33333344455667788999999999999999999876 357899999999999999887 357899999987652
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
..++||+|++... . ..+.. ...+|++ +.++||||
T Consensus 92 ------------~~~~fD~v~~~~~----------l---------~~~~~----~~~~l~~-----------~~~~L~pg 125 (259)
T 2p35_A 92 ------------PAQKADLLYANAV----------F---------QWVPD----HLAVLSQ-----------LMDQLESG 125 (259)
T ss_dssp ------------CSSCEEEEEEESC----------G---------GGSTT----HHHHHHH-----------HGGGEEEE
T ss_pred ------------ccCCcCEEEEeCc----------h---------hhCCC----HHHHHHH-----------HHHhcCCC
Confidence 3468999998432 0 00101 1567777 99999999
Q ss_pred cEEEEEecC
Q psy17793 230 GILVYCTCS 238 (397)
Q Consensus 230 G~lvysTCS 238 (397)
|++++++..
T Consensus 126 G~l~~~~~~ 134 (259)
T 2p35_A 126 GVLAVQMPD 134 (259)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeCC
Confidence 999998754
No 162
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.15 E-value=1.8e-10 Score=110.57 Aligned_cols=116 Identities=17% Similarity=0.170 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-----------------------------
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL----------------------------- 135 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~----------------------------- 135 (397)
++.+|||+|||+|..+..+|...+ ..+|+|+|+|+.+++.++++++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 688999999999999999999863 46999999999999999999887653
Q ss_pred -----------------------------CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCccccc
Q psy17793 136 -----------------------------SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYN 186 (397)
Q Consensus 136 -----------------------------~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~ 186 (397)
.+|++..+|+..... ....+..++||+|++.--
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~------~~~~~~~~~fD~I~~~~v------------ 186 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD------DLVEAQTPEYDVVLCLSL------------ 186 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSH------HHHTTCCCCEEEEEEESC------------
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCcc------ccccccCCCcCEEEEChH------------
Confidence 369999999875420 011234578999998221
Q ss_pred ccCccchHHHHH--HHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 187 ANSFLNLDKKIK--SYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 187 ~~s~~~~~~~~~--~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
-..+. .-.....++|++ +.++|||||+|+..+.
T Consensus 187 -------l~~ihl~~~~~~~~~~l~~-----------~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 187 -------TKWVHLNWGDEGLKRMFRR-----------IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp -------HHHHHHHHHHHHHHHHHHH-----------HHHHEEEEEEEEEECC
T ss_pred -------HHHhhhcCCHHHHHHHHHH-----------HHHHhCCCcEEEEecC
Confidence 11111 011123678888 9999999999999754
No 163
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.15 E-value=8.2e-11 Score=107.27 Aligned_cols=115 Identities=16% Similarity=0.155 Sum_probs=83.3
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH----HHHHhCCCcEEEEEcccccccccchhh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEE----TIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~----n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
.+.++++.+|||+|||+|..+..++... +..+|+|+|+|+.+++.+.+ +..+.++.++++.++|+..+.
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~------ 94 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP------ 94 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC------
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC------
Confidence 4456789999999999999999999974 46899999999998886443 334567788999999998763
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+..+. |.|.+..+ + .....+...-+..+|++ +.++|||||+++++
T Consensus 95 -----~~~~~-d~v~~~~~-------------~-----~~~~~~~~~~~~~~l~~-----------~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 95 -----PLSGV-GELHVLMP-------------W-----GSLLRGVLGSSPEMLRG-----------MAAVCRPGASFLVA 139 (218)
T ss_dssp -----SCCCE-EEEEEESC-------------C-----HHHHHHHHTSSSHHHHH-----------HHHTEEEEEEEEEE
T ss_pred -----CCCCC-CEEEEEcc-------------c-----hhhhhhhhccHHHHHHH-----------HHHHcCCCcEEEEE
Confidence 23344 77765443 1 11111111122567888 99999999999985
Q ss_pred e
Q psy17793 236 T 236 (397)
Q Consensus 236 T 236 (397)
.
T Consensus 140 ~ 140 (218)
T 3mq2_A 140 L 140 (218)
T ss_dssp E
T ss_pred e
Confidence 3
No 164
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.14 E-value=8e-11 Score=106.08 Aligned_cols=112 Identities=14% Similarity=0.072 Sum_probs=84.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
...++.+|||+|||+|..+..++.. .+.+|+|+|+|+.+++.++++++..+ .++.+...|+..+. +
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~-----------~ 85 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLP-----------F 85 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCC-----------S
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCC-----------C
Confidence 3456889999999999986555443 34699999999999999999998887 46888999987652 3
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
..++||+|++... ..... .. ...+++++ +.++|||||.+++++.+.
T Consensus 86 ~~~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 KDESMSFVYSYGT----------IFHMR----KN-------DVKEAIDE-----------IKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CTTCEEEEEECSC----------GGGSC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEEEEET
T ss_pred CCCceeEEEEcCh----------HHhCC----HH-------HHHHHHHH-----------HHHHcCCCcEEEEEEecc
Confidence 4578999997422 11111 11 12567777 899999999999998764
No 165
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=6.2e-11 Score=109.97 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCC-HHHHHHH---HHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKS-KPRVTKL---EETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s-~~rl~~l---~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
+++++|||+|||+|..+..+|.. .....|+|+|+| +.+++.+ ++++++.|+.++++..+|+..+...
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~-------- 93 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE-------- 93 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG--------
T ss_pred CCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh--------
Confidence 67889999999999999999875 356799999999 5555555 8888888999999999999876311
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+ ...+|.|.++.| | .............+|++ +.++|||||++++++
T Consensus 94 -~-~d~v~~i~~~~~-------------~-----~~~~~~~~~~~~~~l~~-----------~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 94 -L-KNIADSISILFP-------------W-----GTLLEYVIKPNRDILSN-----------VADLAKKEAHFEFVT 139 (225)
T ss_dssp -G-TTCEEEEEEESC-------------C-----HHHHHHHHTTCHHHHHH-----------HHTTEEEEEEEEEEE
T ss_pred -c-cCeEEEEEEeCC-------------C-----cHHhhhhhcchHHHHHH-----------HHHhcCCCcEEEEEE
Confidence 1 256888888776 1 11111111112457778 999999999999843
No 166
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.14 E-value=6.3e-11 Score=113.87 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=76.3
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTR 147 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~ 147 (397)
.+......+...+.+.++++|||+|||+|..|..++.. ..+|+|+|+|+.+++.++++++..+. .+++++.+|+.+
T Consensus 12 ~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 12 KNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 34444455666778889999999999999999999986 35899999999999999999987776 579999999987
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCC
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCS 176 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCS 176 (397)
.. + ..||.|++|+|+.
T Consensus 89 ~~-----------~--~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 89 TD-----------L--PFFDTCVANLPYQ 104 (285)
T ss_dssp SC-----------C--CCCSEEEEECCGG
T ss_pred cc-----------c--hhhcEEEEecCcc
Confidence 52 2 3699999999954
No 167
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=1.1e-10 Score=105.05 Aligned_cols=127 Identities=16% Similarity=0.066 Sum_probs=93.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccC
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKES 165 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~ 165 (397)
+.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++ ..+++++.+|+..+. +..++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-----------~~~~~ 102 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLS-----------DSPKR 102 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGG-----------GSCCC
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccc-----------cCCCC
Confidence 789999999999999999885 45899999999999999877 347889999987652 45578
Q ss_pred ccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc----
Q psy17793 166 FDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV---- 241 (397)
Q Consensus 166 fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~---- 241 (397)
||+|++.-. ..... ... ..++|++ +.++|||||++++++.....
T Consensus 103 fD~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~~~~~~~~~~~ 150 (203)
T 3h2b_A 103 WAGLLAWYS----------LIHMG----PGE-------LPDALVA-----------LRMAVEDGGGLLMSFFSGPSLEPM 150 (203)
T ss_dssp EEEEEEESS----------STTCC----TTT-------HHHHHHH-----------HHHTEEEEEEEEEEEECCSSCEEE
T ss_pred eEEEEehhh----------HhcCC----HHH-------HHHHHHH-----------HHHHcCCCcEEEEEEccCCchhhh
Confidence 999998432 01111 011 1566777 89999999999998754322
Q ss_pred --------cccHHHHHHHHHHCCCcEEEecC
Q psy17793 242 --------EENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 242 --------eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
.-..+.+..++++. +++++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~ 180 (203)
T 3h2b_A 151 YHPVATAYRWPLPELAQALETA-GFQVTSSH 180 (203)
T ss_dssp CCSSSCEEECCHHHHHHHHHHT-TEEEEEEE
T ss_pred hchhhhhccCCHHHHHHHHHHC-CCcEEEEE
Confidence 12356677788877 67777654
No 168
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=6.3e-11 Score=116.64 Aligned_cols=116 Identities=17% Similarity=0.145 Sum_probs=87.6
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..+...++.+|||+|||+|..+..++.. +..+|+|+|+|+ +++.++++++.+|+ ++++++.+|+..+.
T Consensus 58 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 126 (340)
T 2fyt_A 58 QNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-------- 126 (340)
T ss_dssp HCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--------
T ss_pred hhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--------
Confidence 3455678899999999999999988885 346999999997 99999999999998 57999999998752
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
++.++||+|++++.... .. . ...+ ..+|.. +.++|||||+++.+.|
T Consensus 127 ---~~~~~~D~Ivs~~~~~~----------l~--~-~~~~-------~~~l~~-----------~~~~LkpgG~lip~~~ 172 (340)
T 2fyt_A 127 ---LPVEKVDVIISEWMGYF----------LL--F-ESML-------DSVLYA-----------KNKYLAKGGSVYPDIC 172 (340)
T ss_dssp ---CSCSCEEEEEECCCBTT----------BT--T-TCHH-------HHHHHH-----------HHHHEEEEEEEESCEE
T ss_pred ---CCCCcEEEEEEcCchhh----------cc--C-HHHH-------HHHHHH-----------HHhhcCCCcEEEcccc
Confidence 34468999999762110 00 0 0111 446666 7889999999986555
Q ss_pred CC
Q psy17793 238 SL 239 (397)
Q Consensus 238 S~ 239 (397)
++
T Consensus 173 ~~ 174 (340)
T 2fyt_A 173 TI 174 (340)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 169
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.14 E-value=1.6e-10 Score=103.78 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++ +|||+|||+|..+..++.. +.+|+++|+|+.+++.++++++..+. ++.+...|+.... +.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-----------~~ 91 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFD-----------IV 91 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBS-----------CC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcC-----------CC
Confidence 3566 9999999999999888874 46999999999999999999999887 7899999987652 34
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
.++||+|++... ... ... ..++|++ +.++|||||++++++..
T Consensus 92 ~~~fD~v~~~~~------------~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 92 ADAWEGIVSIFC------------HLP----SSL-------RQQLYPK-----------VYQGLKPGGVFILEGFA 133 (202)
T ss_dssp TTTCSEEEEECC------------CCC----HHH-------HHHHHHH-----------HHTTCCSSEEEEEEEEC
T ss_pred cCCccEEEEEhh------------cCC----HHH-------HHHHHHH-----------HHHhcCCCcEEEEEEec
Confidence 568999997321 011 111 2567777 89999999999998754
No 170
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.13 E-value=1.8e-10 Score=109.39 Aligned_cols=112 Identities=16% Similarity=0.189 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++...+. .++.+..+|+.... +
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 128 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-----------M 128 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-----------C
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc-----------c
Confidence 367889999999999999988875 356999999999999999999998887 46999999987652 2
Q ss_pred -cccCccEEEEcCCCCCCCCCcccccc-cCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 162 -QKESFDRILLDAPCSGFGQRPMFYNA-NSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 162 -~~~~fD~Il~DpPCSg~G~~p~~~~~-~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
..++||+|+++-. +... .. .. ...++|++ +.++|||||+++++++.
T Consensus 129 ~~~~~fD~v~~~~~---------l~~~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 129 DLGKEFDVISSQFS---------FHYAFST----SE-------SLDIAQRN-----------IARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CCSSCEEEEEEESC---------GGGGGSS----HH-------HHHHHHHH-----------HHHTEEEEEEEEEEEEC
T ss_pred CCCCCcCEEEECch---------hhhhcCC----HH-------HHHHHHHH-----------HHHhcCCCCEEEEEECC
Confidence 3568999998432 0000 01 11 12567888 99999999999998754
No 171
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.13 E-value=1.2e-10 Score=113.00 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEEcccccccccchhhHHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QL--SSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~--~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
...+.+|||+|||+|..+..++.. .+..+|+++|+|+.+++.+++++... ++ .+++++.+|+.....
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-------- 163 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK-------- 163 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH--------
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh--------
Confidence 345689999999999999988875 24579999999999999999998763 33 579999999876531
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|+|... + | ... ....++++. +.++|||||+++..+.+
T Consensus 164 --~~~~~fD~Ii~d~~~~~-~--~-----------~~~-----l~~~~~l~~-----------~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 164 --QNQDAFDVIITDSSDPM-G--P-----------AES-----LFKESYYQL-----------MKTALKEDGVLCCQGEC 211 (304)
T ss_dssp --TCSSCEEEEEEECC------------------------------CHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred --hCCCCceEEEECCCCCC-C--c-----------chh-----hhHHHHHHH-----------HHhccCCCeEEEEecCC
Confidence 13468999999987210 0 0 000 112566777 88999999999988754
No 172
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.13 E-value=5.3e-10 Score=101.23 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=92.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.+++++ ++.+...|+..+. .
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~------------~ 99 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD------------A 99 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC------------C
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC------------C
Confidence 457889999999999999999885 469999999999999999887 3566778877652 3
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|++... ..... ... ...+|++ +.++|||||++++++......
T Consensus 100 ~~~fD~v~~~~~----------l~~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~~~~~~~~~~ 147 (211)
T 3e23_A 100 IDAYDAVWAHAC----------LLHVP----RDE-------LADVLKL-----------IWRALKPGGLFYASYKSGEGE 147 (211)
T ss_dssp CSCEEEEEECSC----------GGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEECCSSC
T ss_pred CCcEEEEEecCc----------hhhcC----HHH-------HHHHHHH-----------HHHhcCCCcEEEEEEcCCCcc
Confidence 578999998432 11111 111 2567777 899999999999987654322
Q ss_pred -----------ccHHHHHHHHHHCCC-cEEEec
Q psy17793 243 -----------ENEAVIAWILHRHPE-VELVQT 263 (397)
Q Consensus 243 -----------EnE~vV~~~L~~~~~-~~l~~~ 263 (397)
-+.+.+..++++. + |+.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~a-G~f~~~~~ 179 (211)
T 3e23_A 148 GRDKLARYYNYPSEEWLRARYAEA-GTWASVAV 179 (211)
T ss_dssp EECTTSCEECCCCHHHHHHHHHHH-CCCSEEEE
T ss_pred cccccchhccCCCHHHHHHHHHhC-CCcEEEEE
Confidence 2556666777765 4 655544
No 173
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.12 E-value=8.7e-11 Score=106.85 Aligned_cols=110 Identities=16% Similarity=0.194 Sum_probs=83.3
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
+.+.++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.+++++. .++++..+|+..+.
T Consensus 41 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~----------- 102 (220)
T 3hnr_A 41 VVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFE----------- 102 (220)
T ss_dssp HHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCC-----------
T ss_pred hhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcC-----------
Confidence 34457889999999999999999885 5699999999999999988765 56889999998763
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
+. ++||+|++.-. ..... .. .+..+|++ +.++|||||.++.++....
T Consensus 103 ~~-~~fD~v~~~~~----------l~~~~----~~-------~~~~~l~~-----------~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 103 VP-TSIDTIVSTYA----------FHHLT----DD-------EKNVAIAK-----------YSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp CC-SCCSEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHHSCTTCEEEEEEECBS
T ss_pred CC-CCeEEEEECcc----------hhcCC----hH-------HHHHHHHH-----------HHHhcCCCCEEEEEecccc
Confidence 23 78999998432 11111 11 11457777 8899999999999875443
Q ss_pred c
Q psy17793 241 V 241 (397)
Q Consensus 241 ~ 241 (397)
.
T Consensus 150 ~ 150 (220)
T 3hnr_A 150 D 150 (220)
T ss_dssp S
T ss_pred C
Confidence 3
No 174
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.12 E-value=1.3e-10 Score=106.73 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++++.. ++++..+|+.... .
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~------------~ 100 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ------------L 100 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC------------C
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC------------c
Confidence 356789999999999999988874 34799999999999999887543 7899999987652 3
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc-ccccCCcEEEEEecC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI-PLLKKDGILVYCTCS 238 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~-~lLkpgG~lvysTCS 238 (397)
.++||+|++.-- .... ... .++|++ +. ++|||||+++.++..
T Consensus 101 ~~~fD~v~~~~~----------l~~~------------~~~-~~~l~~-----------~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 101 PRRYDNIVLTHV----------LEHI------------DDP-VALLKR-----------INDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp SSCEEEEEEESC----------GGGC------------SSH-HHHHHH-----------HHHTTEEEEEEEEEEEEC
T ss_pred CCcccEEEEhhH----------HHhh------------cCH-HHHHHH-----------HHHHhcCCCCEEEEEcCC
Confidence 568999997211 1111 111 467788 99 999999999998743
No 175
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.11 E-value=1.1e-10 Score=110.04 Aligned_cols=91 Identities=18% Similarity=0.316 Sum_probs=72.3
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHH------HHHHHHHHHHHhCC-CcEEEEEcc-cc
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKP------RVTKLEETIKKLQL-SSIQTHVYD-ST 146 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~------rl~~l~~n~~~~g~-~~v~~~~~D-~~ 146 (397)
..+...+.+.++.+|||+|||+|..+..++...+..++|+++|+|+. +++.++++++..++ .++++...| ..
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 34445667889999999999999999999997655579999999997 99999999998887 479999998 32
Q ss_pred cccccchhhHHHhhhcccCccEEEEcCC
Q psy17793 147 RINTSSQIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~~~fD~Il~DpP 174 (397)
... .++..++||+|++...
T Consensus 113 ~~~---------~~~~~~~fD~v~~~~~ 131 (275)
T 3bkx_A 113 DDL---------GPIADQHFDRVVLAHS 131 (275)
T ss_dssp TCC---------GGGTTCCCSEEEEESC
T ss_pred hcc---------CCCCCCCEEEEEEccc
Confidence 211 1245578999998543
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.11 E-value=3.6e-10 Score=111.42 Aligned_cols=115 Identities=15% Similarity=0.069 Sum_probs=88.0
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..+...++.+|||+|||+|..+..++.. +..+|+|+|+|+ +++.++++++.+|+ ++|+++.+|+..+.
T Consensus 44 ~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-------- 112 (348)
T 2y1w_A 44 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-------- 112 (348)
T ss_dssp HTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--------
T ss_pred hccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--------
Confidence 3455668899999999999999988874 456999999996 88999999999998 57999999998752
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
..++||+|+++++... +. .... ...+.+ +.++|||||.++.+++
T Consensus 113 ----~~~~~D~Ivs~~~~~~----------~~----~~~~-------~~~l~~-----------~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 113 ----LPEQVDIIISEPMGYM----------LF----NERM-------LESYLH-----------AKKYLKPSGNMFPTIG 156 (348)
T ss_dssp ----CSSCEEEEEECCCBTT----------BT----TTSH-------HHHHHH-----------GGGGEEEEEEEESCEE
T ss_pred ----CCCceeEEEEeCchhc----------CC----hHHH-------HHHHHH-----------HHhhcCCCeEEEEecC
Confidence 2357999999776211 11 0110 334555 8899999999998877
Q ss_pred CCC
Q psy17793 238 SLS 240 (397)
Q Consensus 238 S~~ 240 (397)
++.
T Consensus 157 ~~~ 159 (348)
T 2y1w_A 157 DVH 159 (348)
T ss_dssp EEE
T ss_pred cEE
Confidence 654
No 177
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.11 E-value=1.2e-10 Score=114.89 Aligned_cols=113 Identities=17% Similarity=0.128 Sum_probs=87.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
..++.+|||+|||+|..+..++.. +..+|+|+|+| .+++.++++++.+|+.+ |+++.+|+..+. +
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE-----------L 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC-----------C
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc-----------C
Confidence 457889999999999999998885 45699999999 59999999999999876 999999998763 3
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
+.++||+|++++...... .. ... ..+|.. +.++|||||+++.+.+++.
T Consensus 130 ~~~~fD~Iis~~~~~~l~-------~~------~~~-------~~~l~~-----------~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYCLF-------YE------SML-------NTVLHA-----------RDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp SSSCEEEEEECCCBBTBT-------BT------CCH-------HHHHHH-----------HHHHEEEEEEEESCEEEEE
T ss_pred CCCceEEEEEcccccccc-------Cc------hhH-------HHHHHH-----------HHHhCCCCCEEccccceEE
Confidence 457899999976521110 00 111 455666 7789999999987766643
No 178
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.10 E-value=1.7e-10 Score=106.25 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=95.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++. ...++.++.+|+..+. +.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~-----------~~ 113 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLP-----------FE 113 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCS-----------SC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCC-----------CC
Confidence 357889999999999999999885 468999999999999998774 3357999999998763 34
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE 242 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e 242 (397)
.++||+|++.-. ..... +. .++|++ +.++|||||++++++......
T Consensus 114 ~~~fD~v~~~~~----------l~~~~--~~-----------~~~l~~-----------~~~~L~pgG~l~i~~~~~~~~ 159 (242)
T 3l8d_A 114 NEQFEAIMAINS----------LEWTE--EP-----------LRALNE-----------IKRVLKSDGYACIAILGPTAK 159 (242)
T ss_dssp TTCEEEEEEESC----------TTSSS--CH-----------HHHHHH-----------HHHHEEEEEEEEEEEECTTCG
T ss_pred CCCccEEEEcCh----------Hhhcc--CH-----------HHHHHH-----------HHHHhCCCeEEEEEEcCCcch
Confidence 578999997322 00111 11 456777 889999999999987433211
Q ss_pred ------------------ccHHHHHHHHHHCCCcEEEecCc
Q psy17793 243 ------------------ENEAVIAWILHRHPEVELVQTLP 265 (397)
Q Consensus 243 ------------------EnE~vV~~~L~~~~~~~l~~~~~ 265 (397)
-..+.+..++++. +++.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~~ 199 (242)
T 3l8d_A 160 PRENSYPRLYGKDVVCNTMMPWEFEQLVKEQ-GFKVVDGIG 199 (242)
T ss_dssp GGGGGGGGGGTCCCSSCCCCHHHHHHHHHHT-TEEEEEEEE
T ss_pred hhhhhhhhhccccccccCCCHHHHHHHHHHc-CCEEEEeec
Confidence 2234567777777 677776543
No 179
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.10 E-value=3e-10 Score=118.63 Aligned_cols=177 Identities=14% Similarity=0.106 Sum_probs=116.5
Q ss_pred CCCcEEEechhHHHHHhccC----CCCCCeEEEEcCCCChHHHHHHHHcC--CCcEEEEEeCCHHHHHHHHHHHHHhCC-
Q psy17793 63 DSSMGILQNLPSILAGHYLD----VQPGQKVLDMCAAPGNKLTHIALLMN--DTGTLIALDKSKPRVTKLEETIKKLQL- 135 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~L~----~~~g~~VLDlcagpG~kt~~lA~~~~--~~~~V~avD~s~~rl~~l~~n~~~~g~- 135 (397)
..|.||-...-+.+++.++. +.++.+|+|.|||+|++.+.++..+. ....++|+|+++..++.++.|+...|+
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 45778887777888888877 67889999999999999999988763 356899999999999999999999998
Q ss_pred -CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCC-cccccccCccchHHHHHHHHHHHHHHHHHHhh
Q psy17793 136 -SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQR-PMFYNANSFLNLDKKIKSYANIQKKLLQAVYR 213 (397)
Q Consensus 136 -~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~-p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~ 213 (397)
.++.+.++|.....- +.....+||+|++|||+++.... ........+... ..+..-...+..++.+
T Consensus 275 ~~~~~I~~gDtL~~d~--------p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~-G~~~~~s~~~~~Fl~~--- 342 (542)
T 3lkd_A 275 IENQFLHNADTLDEDW--------PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPF-GKLAPKSKADFAFLLH--- 342 (542)
T ss_dssp GGGEEEEESCTTTSCS--------CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGG-SSCCCTTCCHHHHHHH---
T ss_pred cCccceEecceecccc--------cccccccccEEEecCCcCCccccchhhhhhhhhhhh-hhcCCCchhhHHHHHH---
Confidence 468899999875410 00234689999999999864321 111000000000 0000001112347777
Q ss_pred hhcccccccccccc-CCcEEEEEecC--CCccccHHHHHHHHHHCCCcE
Q psy17793 214 FVSLFDWQGIPLLK-KDGILVYCTCS--LSVEENEAVIAWILHRHPEVE 259 (397)
Q Consensus 214 f~~~~~~~a~~lLk-pgG~lvysTCS--~~~eEnE~vV~~~L~~~~~~~ 259 (397)
+.++|| +||++++.+-. +.....+..+++.|-+...++
T Consensus 343 --------~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 343 --------GYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAID 383 (542)
T ss_dssp --------HHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEE
T ss_pred --------HHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCcee
Confidence 999999 99998776533 212222444544444433443
No 180
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.10 E-value=2.4e-10 Score=109.33 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEEcccccccccchhhHHHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QL--SSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~--~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
.+.+|||+|||+|+.+..++.. .+..+|+++|+|+..++.+++++..+ ++ .+++++.+|+.....
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~---------- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA---------- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH----------
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh----------
Confidence 4679999999999999888774 24579999999999999999998763 33 469999999987531
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|+|.. .+ |. .... ..++++. +.++|||||+++..+.+
T Consensus 144 ~~~~~fD~Ii~d~~~~-~~--~~--~~l~--------------~~~~~~~-----------~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 144 KSENQYDVIMVDSTEP-VG--PA--VNLF--------------TKGFYAG-----------IAKALKEDGIFVAQTDN 191 (275)
T ss_dssp TCCSCEEEEEESCSSC-CS--CC--CCCS--------------TTHHHHH-----------HHHHEEEEEEEEEECCC
T ss_pred hCCCCeeEEEECCCCC-CC--cc--hhhh--------------HHHHHHH-----------HHHhcCCCcEEEEEcCC
Confidence 1246899999999841 11 10 0000 1345566 88899999999998655
No 181
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.10 E-value=8.2e-11 Score=108.54 Aligned_cols=131 Identities=18% Similarity=0.090 Sum_probs=95.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
+.+|||+|||+|..+..++. ...+|+++|+|+.+++.+++++...+. .++++..+|+..+. ..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------~~~ 131 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR------------PTE 131 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC------------CSS
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC------------CCC
Confidence 35999999999999988765 467899999999999999999887543 46999999998763 335
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc--
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE-- 242 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e-- 242 (397)
+||+|++.... .... ... ..++|++ +.++|||||+++..+.+....
T Consensus 132 ~fD~v~~~~~l----------~~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~~~~~~~~~~~~ 179 (235)
T 3lcc_A 132 LFDLIFDYVFF----------CAIE----PEM-------RPAWAKS-----------MYELLKPDGELITLMYPITDHVG 179 (235)
T ss_dssp CEEEEEEESST----------TTSC----GGG-------HHHHHHH-----------HHHHEEEEEEEEEEECCCSCCCS
T ss_pred CeeEEEEChhh----------hcCC----HHH-------HHHHHHH-----------HHHHCCCCcEEEEEEecccccCC
Confidence 89999973321 0011 011 1456777 889999999999876544322
Q ss_pred -----ccHHHHHHHHHHCCCcEEEecC
Q psy17793 243 -----ENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 243 -----EnE~vV~~~L~~~~~~~l~~~~ 264 (397)
-.++.+..++++. +|+.+.+.
T Consensus 180 ~~~~~~~~~~~~~~l~~~-Gf~~~~~~ 205 (235)
T 3lcc_A 180 GPPYKVDVSTFEEVLVPI-GFKAVSVE 205 (235)
T ss_dssp CSSCCCCHHHHHHHHGGG-TEEEEEEE
T ss_pred CCCccCCHHHHHHHHHHc-CCeEEEEE
Confidence 2456677777776 57776654
No 182
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=4.8e-10 Score=104.15 Aligned_cols=107 Identities=19% Similarity=0.166 Sum_probs=82.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++++..+. ++.+..+|+..+. .
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~------------~ 102 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIA------------F 102 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCC------------C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcc------------c
Confidence 456789999999999999999884 46899999999999999999998886 6899999998753 2
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
.++||+|++... . ..... .. ...++|++ +.++|||||.++..+
T Consensus 103 ~~~fD~v~~~~~--~-------~~~~~----~~-------~~~~~l~~-----------~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 103 KNEFDAVTMFFS--T-------IMYFD----EE-------DLRKLFSK-----------VAEALKPGGVFITDF 145 (252)
T ss_dssp CSCEEEEEECSS--G-------GGGSC----HH-------HHHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred CCCccEEEEcCC--c-------hhcCC----HH-------HHHHHHHH-----------HHHHcCCCeEEEEec
Confidence 357999997321 0 00011 11 12567777 899999999998764
No 183
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.08 E-value=6.3e-11 Score=115.92 Aligned_cols=114 Identities=13% Similarity=0.204 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEEcccccccccchhhHHHh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--Q--LSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g--~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++..+ + -.+++++.+|+.....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~--------- 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------- 184 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH---------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh---------
Confidence 456799999999999999888743 4579999999999999999998763 2 2569999999876521
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|++.. .+ | ...+ .+.++++. +.++|||||.++..+.+
T Consensus 185 -~~~~~fDvIi~d~~~p-~~--~-----------~~~l-----~~~~~l~~-----------~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 185 -NVTNTYDVIIVDSSDP-IG--P-----------AETL-----FNQNFYEK-----------IYNALKPNGYCVAQCES 232 (321)
T ss_dssp -HCCSCEEEEEEECCCS-SS--G-----------GGGG-----SSHHHHHH-----------HHHHEEEEEEEEEEECC
T ss_pred -hcCCCceEEEECCcCC-CC--c-----------chhh-----hHHHHHHH-----------HHHhcCCCcEEEEEcCC
Confidence 1346899999998621 00 0 0000 11456777 88999999999997654
No 184
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.08 E-value=2.3e-10 Score=105.30 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++.. .+|+++|+|+.+++.+++++...+ .++++...|+.... + .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~-----------~-~ 94 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELE-----------L-P 94 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCC-----------C-S
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcC-----------C-C
Confidence 45789999999999999887764 689999999999999999999887 46899999987652 2 3
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
++||+|++...+ +.+..+ ... ..++|++ +.++|||||++++++.+
T Consensus 95 ~~fD~v~~~~~~--------~~~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 95 EPVDAITILCDS--------LNYLQT----EAD-------VKQTFDS-----------AARLLTDGGKLLFDVHS 139 (243)
T ss_dssp SCEEEEEECTTG--------GGGCCS----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEeCCc--------hhhcCC----HHH-------HHHHHHH-----------HHHhcCCCeEEEEEcCC
Confidence 689999984310 000001 111 1566777 88999999999987544
No 185
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.08 E-value=7.4e-11 Score=113.26 Aligned_cols=115 Identities=13% Similarity=0.193 Sum_probs=85.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEEcccccccccchhhHHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ----LSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g----~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
..++.+|||+|||+|+.+..++.. .+..+|+++|+|+..++.+++++..++ -.+++++.+|+.....
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~-------- 146 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE-------- 146 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH--------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH--------
Confidence 345689999999999999988864 245799999999999999999987653 3579999999976531
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|++..- + | ...+ .+.++++. +.++|||||+++..+++
T Consensus 147 --~~~~~fD~Ii~d~~~~~-~--~-----------~~~l-----~~~~~l~~-----------~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 147 --NVTNTYDVIIVDSSDPI-G--P-----------AETL-----FNQNFYEK-----------IYNALKPNGYCVAQCES 194 (283)
T ss_dssp --HCCSCEEEEEEECCCTT-T--G-----------GGGG-----SSHHHHHH-----------HHHHEEEEEEEEEECCC
T ss_pred --hCCCCceEEEEcCCCCC-C--c-----------chhh-----hHHHHHHH-----------HHHhcCCCcEEEEECCC
Confidence 12468999999986311 1 0 0000 11456666 88899999999998765
No 186
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.08 E-value=2.8e-10 Score=113.55 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=88.1
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHH
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~ 158 (397)
.+...++.+|||+|||+|..+..++.. +..+|+|+|+| .+++.++++++.+|+.+ |+++.+|+..+.
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------- 125 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--------- 125 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC---------
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC---------
Confidence 345678899999999999999998885 34599999999 99999999999999875 999999998763
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+. ++||+|++++...... . ... ...++.. +.++|||||.++.+.++
T Consensus 126 --~~-~~~D~Iv~~~~~~~l~-------~------e~~-------~~~~l~~-----------~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 126 --LP-EKVDVIISEWMGYFLL-------R------ESM-------FDSVISA-----------RDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp --CS-SCEEEEEECCCBTTBT-------T------TCT-------HHHHHHH-----------HHHHEEEEEEEESSEEE
T ss_pred --cC-CcceEEEEcChhhccc-------c------hHH-------HHHHHHH-----------HHhhCCCCeEEEEecCe
Confidence 22 7899999977311100 0 010 1445666 77899999999888776
Q ss_pred C
Q psy17793 239 L 239 (397)
Q Consensus 239 ~ 239 (397)
+
T Consensus 172 ~ 172 (376)
T 3r0q_C 172 M 172 (376)
T ss_dssp E
T ss_pred E
Confidence 4
No 187
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.08 E-value=1.5e-10 Score=107.91 Aligned_cols=105 Identities=19% Similarity=0.162 Sum_probs=82.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+.++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++++ ..+..++.+..+|+..+. +
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~-----------~ 100 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP-----------L 100 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC-----------S
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC-----------C
Confidence 5678899999999999999988874 479999999999999999988 445568999999997652 3
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
..++||+|++.-. . .+- . . ..++|++ +.++|||||.++.+
T Consensus 101 ~~~~fD~v~~~~~----------l-~~~----~----~----~~~~l~~-----------~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 PDESVHGVIVVHL----------W-HLV----P----D----WPKVLAE-----------AIRVLKPGGALLEG 140 (263)
T ss_dssp CTTCEEEEEEESC----------G-GGC----T----T----HHHHHHH-----------HHHHEEEEEEEEEE
T ss_pred CCCCeeEEEECCc----------h-hhc----C----C----HHHHHHH-----------HHHHCCCCcEEEEE
Confidence 4578999998322 0 010 0 1 1456777 88999999999887
No 188
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.08 E-value=1.9e-10 Score=111.47 Aligned_cols=118 Identities=14% Similarity=0.073 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC------cEEEEEcccccccccchhhHHH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS------SIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~------~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
++.+|||+|||+|+.+..++.. +.+.|+|+|+|+.+++.++++....+.. ++++...|...-... ..-.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~---~~l~ 122 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFV---SSVR 122 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHH---HHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhh---hhhh
Confidence 5789999999999877665552 4569999999999999999998887753 356777776321000 0000
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
..+..++||+|++--- +.+.+. ... +..+|++ +.++|||||+++.+|..
T Consensus 123 ~~~~~~~FD~V~~~~~---------lhy~~~----~~~-------~~~~l~~-----------~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 123 EVFYFGKFNIIDWQFA---------IHYSFH----PRH-------YATVMNN-----------LSELTASGGKVLITTMD 171 (302)
T ss_dssp TTCCSSCEEEEEEESC---------GGGTCS----TTT-------HHHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred ccccCCCeeEEEECch---------HHHhCC----HHH-------HHHHHHH-----------HHHHcCCCCEEEEEeCC
Confidence 1134578999986110 000011 011 1567888 99999999999998753
No 189
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.07 E-value=3.7e-10 Score=109.41 Aligned_cols=116 Identities=14% Similarity=0.171 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEEcccccccccchhhHHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL----QLSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~----g~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
..++.+|||+|||+|+.+..++.. .+..+|+++|+|+..++.+++++..+ .-.+++++.+|+..+...
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~------- 164 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ------- 164 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-------
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-------
Confidence 356789999999999999988875 24579999999999999999988542 235699999998765310
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|++... +. ...+ .+.++++. +.++|||||+++..+.+
T Consensus 165 --~~~~~fDvIi~d~~~~~----------~~----~~~l-----~~~~~l~~-----------~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 165 --TPDNTYDVVIIDTTDPA----------GP----ASKL-----FGEAFYKD-----------VLRILKPDGICCNQGES 212 (304)
T ss_dssp --SCTTCEEEEEEECC----------------------------CCHHHHHH-----------HHHHEEEEEEEEEEECC
T ss_pred --ccCCceeEEEECCCCcc----------cc----chhh-----hHHHHHHH-----------HHHhcCCCcEEEEecCC
Confidence 12468999999987210 00 0111 12456777 88999999999987544
No 190
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.07 E-value=3.1e-10 Score=104.32 Aligned_cols=106 Identities=20% Similarity=0.223 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.+++++...+. ++.+...|+..+. +. +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-----------~~-~ 100 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLN-----------IN-R 100 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCC-----------CS-C
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCC-----------cc-C
Confidence 6789999999999999988875 46899999999999999999998886 7899999987652 23 6
Q ss_pred CccEEEEcC-CCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 165 SFDRILLDA-PCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 165 ~fD~Il~Dp-PCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
+||+|++.. . ..... + ... ..++|++ +.++|||||.+++++.
T Consensus 101 ~fD~v~~~~~~----------l~~~~--~-~~~-------~~~~l~~-----------~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 101 KFDLITCCLDS----------TNYII--D-SDD-------LKKYFKA-----------VSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CEEEEEECTTG----------GGGCC--S-HHH-------HHHHHHH-----------HHTTEEEEEEEEEEEE
T ss_pred CceEEEEcCcc----------ccccC--C-HHH-------HHHHHHH-----------HHHhcCCCcEEEEEec
Confidence 899999843 1 11110 0 111 2567788 9999999999998643
No 191
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.07 E-value=1.8e-10 Score=105.99 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++ ..++++.++|+.... ++.
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~----------~~~ 107 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGEL----------PAG 107 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSC----------CTT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhcc----------CCc
Confidence 367889999999999999998885 46999999999999999887 457899999995432 134
Q ss_pred -ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 163 -KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 163 -~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
.++||+|++.+. . ..+|++ +.++|||||+++....
T Consensus 108 ~~~~fD~v~~~~~------------------~-----------~~~l~~-----------~~~~LkpgG~l~~~~~---- 143 (226)
T 3m33_A 108 LGAPFGLIVSRRG------------------P-----------TSVILR-----------LPELAAPDAHFLYVGP---- 143 (226)
T ss_dssp CCCCEEEEEEESC------------------C-----------SGGGGG-----------HHHHEEEEEEEEEEES----
T ss_pred CCCCEEEEEeCCC------------------H-----------HHHHHH-----------HHHHcCCCcEEEEeCC----
Confidence 578999998521 1 223344 7788999999993221
Q ss_pred cccHHHHHHHHHHCCCcEEEe
Q psy17793 242 EENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 242 eEnE~vV~~~L~~~~~~~l~~ 262 (397)
..+.+.+...+++. +++...
T Consensus 144 ~~~~~~~~~~l~~~-Gf~~~~ 163 (226)
T 3m33_A 144 RLNVPEVPERLAAV-GWDIVA 163 (226)
T ss_dssp SSCCTHHHHHHHHT-TCEEEE
T ss_pred cCCHHHHHHHHHHC-CCeEEE
Confidence 22333556667766 455443
No 192
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.07 E-value=1e-10 Score=106.08 Aligned_cols=108 Identities=16% Similarity=0.108 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.+.++|||+|||+|..++.++... +..+|+|+|+|+.+++.+++|+.++|+. ++++ .|.... ..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~------------~~ 112 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD------------VY 112 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH------------HT
T ss_pred CCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc------------CC
Confidence 446799999999999998887764 4559999999999999999999999998 5766 454322 24
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE-ecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC-TCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys-TCS~~ 240 (397)
.+.||+|++ .+.+.-+ +.++..+.+ ..+.|||||.+|-- |-|+.
T Consensus 113 ~~~~DvVLa----------------------~k~LHlL-~~~~~al~~-----------v~~~L~pggvfISfptksl~ 157 (200)
T 3fzg_A 113 KGTYDVVFL----------------------LKMLPVL-KQQDVNILD-----------FLQLFHTQNFVISFPIKSLS 157 (200)
T ss_dssp TSEEEEEEE----------------------ETCHHHH-HHTTCCHHH-----------HHHTCEEEEEEEEEECCCCC
T ss_pred CCCcChhhH----------------------hhHHHhh-hhhHHHHHH-----------HHHHhCCCCEEEEeChHHhc
Confidence 578999997 2334444 333455556 88999999987633 34443
No 193
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.07 E-value=2.7e-10 Score=111.42 Aligned_cols=114 Identities=19% Similarity=0.136 Sum_probs=86.4
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
+...++.+|||+|||+|..+..++.. +..+|+|+|++ .+++.++++++.+|+. +|+++.+|+..+.
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 100 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH---------- 100 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC----------
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc----------
Confidence 33457889999999999999988874 45699999999 5899999999999986 4999999998752
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
++.++||+|+++++..... ... .+ ..+|.. +.++|||||+++.+++++
T Consensus 101 -~~~~~~D~Ivs~~~~~~l~-------~~~--~~-----------~~~l~~-----------~~~~LkpgG~li~~~~~~ 148 (328)
T 1g6q_1 101 -LPFPKVDIIISEWMGYFLL-------YES--MM-----------DTVLYA-----------RDHYLVEGGLIFPDKCSI 148 (328)
T ss_dssp -CSSSCEEEEEECCCBTTBS-------TTC--CH-----------HHHHHH-----------HHHHEEEEEEEESCEEEE
T ss_pred -CCCCcccEEEEeCchhhcc-------cHH--HH-----------HHHHHH-----------HHhhcCCCeEEEEeeceE
Confidence 2346899999987632210 000 01 345666 778999999998666654
No 194
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.06 E-value=1.5e-10 Score=109.31 Aligned_cols=111 Identities=15% Similarity=0.075 Sum_probs=80.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH-----------------hCCCcEEEEEcc
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKK-----------------LQLSSIQTHVYD 144 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~-----------------~g~~~v~~~~~D 144 (397)
.+.++.+|||+|||+|..+..+|.. +..|+|+|+|+.+++.++++... ....+|++.++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3467889999999999999999984 45899999999999999765431 012579999999
Q ss_pred cccccccchhhHHHhhhc-ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy17793 145 STRINTSSQIDIERMKLQ-KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGI 223 (397)
Q Consensus 145 ~~~~~~~~~~d~~~~~~~-~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~ 223 (397)
+..+. +. .++||+|+.... ..... .. ....++++ +.
T Consensus 142 ~~~l~-----------~~~~~~FD~V~~~~~----------l~~l~----~~-------~~~~~l~~-----------~~ 178 (252)
T 2gb4_A 142 IFDLP-----------RANIGKFDRIWDRGA----------LVAIN----PG-------DHDRYADI-----------IL 178 (252)
T ss_dssp TTTGG-----------GGCCCCEEEEEESSS----------TTTSC----GG-------GHHHHHHH-----------HH
T ss_pred cccCC-----------cccCCCEEEEEEhhh----------hhhCC----HH-------HHHHHHHH-----------HH
Confidence 98763 22 268999996321 00001 01 11456777 88
Q ss_pred ccccCCcEEEEEecC
Q psy17793 224 PLLKKDGILVYCTCS 238 (397)
Q Consensus 224 ~lLkpgG~lvysTCS 238 (397)
++|||||++++.|..
T Consensus 179 ~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 179 SLLRKEFQYLVAVLS 193 (252)
T ss_dssp HTEEEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEEe
Confidence 999999999876543
No 195
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.06 E-value=4.3e-10 Score=115.83 Aligned_cols=112 Identities=15% Similarity=0.078 Sum_probs=85.6
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
+...++.+|||+|||+|..+..+|.. +..+|+|+|+|+ +++.++++++++|+ ++|+++.+|+..+.
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~---------- 220 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS---------- 220 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC----------
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc----------
Confidence 44567889999999999999988873 456999999998 99999999999998 57999999998752
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
..++||+|+++++ -.... .... ...+.. +.++|||||.++.+.+++
T Consensus 221 --~~~~fD~Ivs~~~-------------------~~~~~-~e~~-~~~l~~-----------~~~~LkpgG~li~~~~~~ 266 (480)
T 3b3j_A 221 --LPEQVDIIISEPM-------------------GYMLF-NERM-LESYLH-----------AKKYLKPSGNMFPTIGDV 266 (480)
T ss_dssp --CSSCEEEEECCCC-------------------HHHHT-CHHH-HHHHHH-----------GGGGEEEEEEEESCEEEE
T ss_pred --cCCCeEEEEEeCc-------------------hHhcC-cHHH-HHHHHH-----------HHHhcCCCCEEEEEecee
Confidence 2357999999876 01110 0011 334556 889999999999765553
No 196
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.06 E-value=1.5e-10 Score=106.65 Aligned_cols=111 Identities=16% Similarity=0.179 Sum_probs=84.2
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
.+...+...++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++++.. .++++...|+....
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~------ 102 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH------ 102 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC------
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc------
Confidence 4455666678899999999999999998885 334999999999999999877543 36899999987652
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+..++||+|++... ..... . ...+|++ +.++|||||+++++
T Consensus 103 -----~~~~~fD~v~~~~~----------l~~~~---------~----~~~~l~~-----------~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 103 -----LPQDSFDLAYSSLA----------LHYVE---------D----VARLFRT-----------VHQALSPGGHFVFS 143 (243)
T ss_dssp -----CCTTCEEEEEEESC----------GGGCS---------C----HHHHHHH-----------HHHHEEEEEEEEEE
T ss_pred -----CCCCCceEEEEecc----------ccccc---------h----HHHHHHH-----------HHHhcCcCcEEEEE
Confidence 34568999998432 00111 1 1467777 88999999999998
Q ss_pred e
Q psy17793 236 T 236 (397)
Q Consensus 236 T 236 (397)
+
T Consensus 144 ~ 144 (243)
T 3bkw_A 144 T 144 (243)
T ss_dssp E
T ss_pred e
Confidence 6
No 197
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.05 E-value=2e-10 Score=109.32 Aligned_cols=126 Identities=10% Similarity=0.057 Sum_probs=87.2
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC----CcEEEEEccccccccc
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL----SSIQTHVYDSTRINTS 151 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~----~~v~~~~~D~~~~~~~ 151 (397)
++...+...++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.+++++...+. .++.+..+|+..+..
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 123 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK- 123 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH-
T ss_pred HHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc-
Confidence 3444555667889999999999999999885 45999999999999999998865543 357788888876520
Q ss_pred chhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcE
Q psy17793 152 SQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGI 231 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~ 231 (397)
..+..++||+|++...+ ..... +..... ....++|++ +.++|||||+
T Consensus 124 -------~~~~~~~fD~V~~~g~~---------l~~~~--~~~~~~----~~~~~~l~~-----------~~~~LkpgG~ 170 (293)
T 3thr_A 124 -------DVPAGDGFDAVICLGNS---------FAHLP--DSKGDQ----SEHRLALKN-----------IASMVRPGGL 170 (293)
T ss_dssp -------HSCCTTCEEEEEECTTC---------GGGSC--CSSSSS----HHHHHHHHH-----------HHHTEEEEEE
T ss_pred -------ccccCCCeEEEEEcChH---------HhhcC--ccccCH----HHHHHHHHH-----------HHHHcCCCeE
Confidence 00345789999973110 00111 000000 112667888 9999999999
Q ss_pred EEEEecC
Q psy17793 232 LVYCTCS 238 (397)
Q Consensus 232 lvysTCS 238 (397)
++.+++.
T Consensus 171 l~~~~~~ 177 (293)
T 3thr_A 171 LVIDHRN 177 (293)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998664
No 198
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.05 E-value=1.5e-10 Score=101.19 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=79.1
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++ ..++++...| ..
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~------------ 70 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP-KE------------ 70 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GG------------
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CC------------
Confidence 3456788899999999999999888853 4999999999999999887 4578888888 22
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+..++||+|++.... .... + ...+|++ +.++|||||++++++..
T Consensus 71 -~~~~~~D~v~~~~~l----------~~~~--~-----------~~~~l~~-----------~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 71 -IPDNSVDFILFANSF----------HDMD--D-----------KQHVISE-----------VKRILKDDGRVIIIDWR 114 (170)
T ss_dssp -SCTTCEEEEEEESCS----------TTCS--C-----------HHHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEEccch----------hccc--C-----------HHHHHHH-----------HHHhcCCCCEEEEEEcC
Confidence 345789999974331 1111 1 1466777 88999999999998654
No 199
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.05 E-value=1.8e-09 Score=108.19 Aligned_cols=102 Identities=16% Similarity=0.176 Sum_probs=78.5
Q ss_pred cCCCcEEEechhH---HH---HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCC--------------------------
Q psy17793 62 LDSSMGILQNLPS---IL---AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMND-------------------------- 109 (397)
Q Consensus 62 ~~~g~~~~Qd~~S---~l---~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~-------------------------- 109 (397)
++.|+...|..+. .+ +.......++..|||.|||+|++++.+|....+
T Consensus 166 ~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~ 245 (385)
T 3ldu_A 166 HKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVR 245 (385)
T ss_dssp TCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHH
T ss_pred hhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHH
Confidence 4566655553321 12 233456678899999999999999988876422
Q ss_pred -----------CcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 110 -----------TGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 110 -----------~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
...|+|+|+|+.+++.+++|++.+|+. +|++.+.|+.++. ....||+|++|||+
T Consensus 246 ~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~------------~~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 246 KDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK------------SEDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCC------------CSCBSCEEEECCCC
T ss_pred HHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcC------------cCCCCcEEEECCCC
Confidence 157999999999999999999999996 5999999998763 23579999999994
No 200
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.05 E-value=2.6e-10 Score=108.10 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
.+.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++ ..+|.+..+|+..+. +.++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~-----------~~~~ 98 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTG-----------LPPA 98 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCC-----------CCSS
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhc-----------ccCC
Confidence 4569999999999999988874 4689999999999887653 257999999998763 5678
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
+||+|++-- ..+|- +. .+.+.+ +.++|||||+|++.+.+...
T Consensus 99 sfD~v~~~~-----------~~h~~--~~-----------~~~~~e-----------~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 99 SVDVAIAAQ-----------AMHWF--DL-----------DRFWAE-----------LRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp CEEEEEECS-----------CCTTC--CH-----------HHHHHH-----------HHHHEEEEEEEEEEEECCCB
T ss_pred cccEEEEee-----------ehhHh--hH-----------HHHHHH-----------HHHHcCCCCEEEEEECCCCC
Confidence 999999711 11221 12 345667 88999999999998776543
No 201
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.04 E-value=2.7e-10 Score=111.14 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEEcccccccccchhhHHHh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QL--SSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~--~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
..+.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++..+ ++ .+++++.+|+.....
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~--------- 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK--------- 176 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH---------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH---------
Confidence 345799999999999999888753 4579999999999999999998765 33 569999999876521
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
...++||+|++|++.. . . ....+ ...++++. +.++|||||+++..+.+.
T Consensus 177 -~~~~~fD~Ii~d~~~~-~----------~---~~~~l-----~t~~~l~~-----------~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 177 -NHKNEFDVIITDSSDP-V----------G---PAESL-----FGQSYYEL-----------LRDALKEDGILSSQGESV 225 (314)
T ss_dssp -HCTTCEEEEEECCC--------------------------------HHHH-----------HHHHEEEEEEEEEECCCT
T ss_pred -hcCCCceEEEEcCCCC-C----------C---cchhh-----hHHHHHHH-----------HHhhcCCCeEEEEECCCc
Confidence 1346899999999621 0 0 00110 12566777 889999999999986553
No 202
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.04 E-value=9.3e-10 Score=110.26 Aligned_cols=85 Identities=9% Similarity=0.120 Sum_probs=72.0
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCC-------------------------------------CcEEEEEeCCHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMND-------------------------------------TGTLIALDKSKP 121 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~-------------------------------------~~~V~avD~s~~ 121 (397)
.+....++..|||.+||+|+..+.+|....+ ..+|+|+|+|+.
T Consensus 188 ~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 188 LLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 3445678899999999999999988876432 146999999999
Q ss_pred HHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 122 RVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 122 rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
+++.+++|++.+|+.+ |++.+.|+..+. ....||+|++|||+
T Consensus 268 al~~Ar~Na~~~gl~~~I~~~~~D~~~l~------------~~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 268 MVEIARKNAREVGLEDVVKLKQMRLQDFK------------TNKINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEECCGGGCC------------CCCCSCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHHCC------------ccCCcCEEEECCch
Confidence 9999999999999975 999999998863 23579999999996
No 203
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=2.4e-09 Score=108.78 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=84.4
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHH-------HHHHHHhC--CCcEEEEEccccccc
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKL-------EETIKKLQ--LSSIQTHVYDSTRIN 149 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l-------~~n~~~~g--~~~v~~~~~D~~~~~ 149 (397)
..+.+.+|++|||+|||+|..+..+|... +..+|+|+|+++.+++.+ +++++++| ..+|+++.+|.....
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 45677899999999999999999999876 346899999999999888 99999999 568999988654210
Q ss_pred ccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC
Q psy17793 150 TSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD 229 (397)
Q Consensus 150 ~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg 229 (397)
.. .....+.||+|+++..+. ...+ ...|.+ +.+.||||
T Consensus 315 ~~-------~~~~~~~FDvIvvn~~l~-----------------~~d~-------~~~L~e-----------l~r~LKpG 352 (433)
T 1u2z_A 315 NR-------VAELIPQCDVILVNNFLF-----------------DEDL-------NKKVEK-----------ILQTAKVG 352 (433)
T ss_dssp HH-------HHHHGGGCSEEEECCTTC-----------------CHHH-------HHHHHH-----------HHTTCCTT
T ss_pred cc-------cccccCCCCEEEEeCccc-----------------cccH-------HHHHHH-----------HHHhCCCC
Confidence 00 001135799999864310 0111 234566 88999999
Q ss_pred cEEEEE
Q psy17793 230 GILVYC 235 (397)
Q Consensus 230 G~lvys 235 (397)
|+|+.+
T Consensus 353 G~lVi~ 358 (433)
T 1u2z_A 353 CKIISL 358 (433)
T ss_dssp CEEEES
T ss_pred eEEEEe
Confidence 999875
No 204
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=1.6e-10 Score=109.59 Aligned_cols=108 Identities=18% Similarity=0.238 Sum_probs=83.0
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...+.+.++.+|||+|||+|..+..++. ..++|+|+|+|+.+++.+++++ .++.+..+|+..+.
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~------- 113 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFR------- 113 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCC-------
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCC-------
Confidence 33556778899999999999999999988 4579999999999999998764 56788899987752
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+ .++||+|++... ..... +. ..+|++ +.++|||||++++++
T Consensus 114 ----~-~~~fD~v~~~~~----------l~~~~--d~-----------~~~l~~-----------~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 114 ----V-DKPLDAVFSNAM----------LHWVK--EP-----------EAAIAS-----------IHQALKSGGRFVAEF 154 (279)
T ss_dssp ----C-SSCEEEEEEESC----------GGGCS--CH-----------HHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ----c-CCCcCEEEEcch----------hhhCc--CH-----------HHHHHH-----------HHHhcCCCcEEEEEe
Confidence 2 468999998432 00001 11 456777 889999999999886
Q ss_pred cC
Q psy17793 237 CS 238 (397)
Q Consensus 237 CS 238 (397)
..
T Consensus 155 ~~ 156 (279)
T 3ccf_A 155 GG 156 (279)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 205
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.03 E-value=3.6e-10 Score=106.71 Aligned_cols=141 Identities=16% Similarity=0.047 Sum_probs=91.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC--C------------------------
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ--L------------------------ 135 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g--~------------------------ 135 (397)
...+|.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567889999999999887655542 33479999999999999998876532 1
Q ss_pred ---CcEE-EEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHH-HHHHHHHHHHHHH
Q psy17793 136 ---SSIQ-THVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKI-KSYANIQKKLLQA 210 (397)
Q Consensus 136 ---~~v~-~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~-~~l~~~Q~~lL~~ 210 (397)
.+|+ +..+|+...... .+...++||+|++.- .+ ..+ ...... .++|++
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~-------~~~~~~~fD~V~~~~------------------~l-~~i~~~~~~~-~~~l~~ 182 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPL-------APAVLPLADCVLTLL------------------AM-ECACCSLDAY-RAALCN 182 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTT-------TTCCCCCEEEEEEES------------------CH-HHHCSSHHHH-HHHHHH
T ss_pred HHHhhhheEEeccccCCCCC-------CccccCCCCEeeehH------------------HH-HHhcCCHHHH-HHHHHH
Confidence 1244 778888763110 001245899999710 11 111 111222 567888
Q ss_pred HhhhhccccccccccccCCcEEEEEecCCCc------------cccHHHHHHHHHHCCCcEEEec
Q psy17793 211 VYRFVSLFDWQGIPLLKKDGILVYCTCSLSV------------EENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 211 ~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~------------eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+.++|||||+|+.++..-.. .-.++.+...|++. +|+++.+
T Consensus 183 -----------i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~a-GF~i~~~ 235 (263)
T 2a14_A 183 -----------LASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDA-GFDIEQL 235 (263)
T ss_dssp -----------HHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEE
T ss_pred -----------HHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHC-CCEEEEE
Confidence 99999999999999642110 01455566677766 5766654
No 206
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.03 E-value=9.8e-10 Score=106.97 Aligned_cols=117 Identities=12% Similarity=0.112 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C---CCcEEEEEcccccccccchhhHHH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--Q---LSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g---~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
..+.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++..+ + -.+++++.+|+.....
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~-------- 146 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE-------- 146 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH--------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH--------
Confidence 455799999999999999888753 4579999999999999999998762 2 3579999999976521
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...++||+|++|++... +. .. .... + ...++++. +.++|||||+++..+.+
T Consensus 147 --~~~~~fD~Ii~d~~~~~-~~-------~~---~~~~---l--~~~~~l~~-----------~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 147 --RTEERYDVVIIDLTDPV-GE-------DN---PARL---L--YTVEFYRL-----------VKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp --HCCCCEEEEEEECCCCB-ST-------TC---GGGG---G--SSHHHHHH-----------HHHTEEEEEEEEEEEEE
T ss_pred --hcCCCccEEEECCCCcc-cc-------cC---cchh---c--cHHHHHHH-----------HHHhcCCCcEEEEEccC
Confidence 23468999999987311 00 00 0000 0 01456677 88999999999987654
No 207
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=1.1e-09 Score=98.49 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=62.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
...++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++ +++++.+|+..+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~------------- 107 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI------------- 107 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC-------------
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC-------------
Confidence 4567889999999999999998885 44589999999999999999876 678999998764
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
. ++||+|++|||.
T Consensus 108 ~-~~~D~v~~~~p~ 120 (200)
T 1ne2_A 108 S-GKYDTWIMNPPF 120 (200)
T ss_dssp C-CCEEEEEECCCC
T ss_pred C-CCeeEEEECCCc
Confidence 2 579999999993
No 208
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.02 E-value=1.8e-09 Score=102.68 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=78.3
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
.+...+.+.++.+|||+|||+|..+..+|.. +.+|+|+|+|+.+++.++++++.. .+.....|.....
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~~------ 103 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAEI------ 103 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSCC------
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc---cceeeeeeccccc------
Confidence 3445677889999999999999999999984 469999999999999999987654 2222222222100
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
.....++||+|+++.. ...+. ... .+..+.+ +.++| |||+|++|
T Consensus 104 ---~~~~~~~fD~Vv~~~~----------l~~~~----~~~-------~~~~l~~-----------l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 104 ---PKELAGHFDFVLNDRL----------INRFT----TEE-------ARRACLG-----------MLSLV-GSGTVRAS 147 (261)
T ss_dssp ---CGGGTTCCSEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHHH-TTSEEEEE
T ss_pred ---ccccCCCccEEEEhhh----------hHhCC----HHH-------HHHHHHH-----------HHHhC-cCcEEEEE
Confidence 0012468999999654 11111 121 1456666 77889 99999987
Q ss_pred ec
Q psy17793 236 TC 237 (397)
Q Consensus 236 TC 237 (397)
..
T Consensus 148 ~~ 149 (261)
T 3iv6_A 148 VK 149 (261)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 209
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.02 E-value=4e-10 Score=110.84 Aligned_cols=117 Identities=17% Similarity=0.215 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEEcccccccccchhhHHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QL--SSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~--~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
...+.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++.++ |+ .+++++.+|+.....
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~-------- 188 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK-------- 188 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH--------
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH--------
Confidence 3456799999999999999888752 4579999999999999999998875 44 479999999876531
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
....++||+|++|++- |.. . ... + ...++++. +.++|||||.|+..+.+
T Consensus 189 -~~~~~~fDlIi~d~~~------p~~---~-----~~~---l--~~~~~l~~-----------~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 189 -NAAEGSYDAVIVDSSD------PIG---P-----AKE---L--FEKPFFQS-----------VARALRPGGVVCTQAES 237 (334)
T ss_dssp -TSCTTCEEEEEECCCC------TTS---G-----GGG---G--GSHHHHHH-----------HHHHEEEEEEEEEECCC
T ss_pred -hccCCCccEEEECCCC------ccC---c-----chh---h--hHHHHHHH-----------HHHhcCCCcEEEEecCC
Confidence 1234689999999861 100 0 010 0 11566777 88999999999997554
Q ss_pred C
Q psy17793 239 L 239 (397)
Q Consensus 239 ~ 239 (397)
.
T Consensus 238 ~ 238 (334)
T 1xj5_A 238 L 238 (334)
T ss_dssp T
T ss_pred c
Confidence 3
No 210
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.02 E-value=1.3e-10 Score=121.32 Aligned_cols=174 Identities=11% Similarity=0.010 Sum_probs=112.1
Q ss_pred CCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCC--------------CcEEEEEeCCHHHHHHHHH
Q psy17793 63 DSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMND--------------TGTLIALDKSKPRVTKLEE 128 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~--------------~~~V~avD~s~~rl~~l~~ 128 (397)
..|.|+-...-+.+++.++.++++ +|||.|||+|++.+.++..+.. ...++|+|+++..++.++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 457888888888888999998877 9999999999999887765421 4589999999999999999
Q ss_pred HHHHhCCCc-EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcc-cc--cccCccchHH---HHHHHH
Q psy17793 129 TIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPM-FY--NANSFLNLDK---KIKSYA 201 (397)
Q Consensus 129 n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~-~~--~~~s~~~~~~---~~~~l~ 201 (397)
|+...|+.. +.+.++|..... .+...+||+|++|||.+......+ .. .++....... .+..-.
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~----------~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~ 371 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDD----------QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTG 371 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSC----------SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTT
T ss_pred HHHHhCCCcccceeccchhcCc----------ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCc
Confidence 999998853 444677765432 123468999999999987431111 00 0000000000 000000
Q ss_pred HHHHHHHHHHhhhhccccccccccccCCcEEEEEecC--CCcc-ccHHHHHHHHHHCCCc
Q psy17793 202 NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS--LSVE-ENEAVIAWILHRHPEV 258 (397)
Q Consensus 202 ~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS--~~~e-EnE~vV~~~L~~~~~~ 258 (397)
..+..++.+ ++++||+||++++.+-. +... -.+..+++.|-+...+
T Consensus 372 ~~~~~Fl~~-----------~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 372 NANFAWMLH-----------MLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp CTHHHHHHH-----------HHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCE
T ss_pred chhHHHHHH-----------HHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcH
Confidence 111346777 99999999998777532 2222 2444555554444333
No 211
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.01 E-value=2.1e-09 Score=102.76 Aligned_cols=137 Identities=17% Similarity=0.142 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeC-CHHHHHHHHHHH-----HHhCCC-----cEEEEEccccccccc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDK-SKPRVTKLEETI-----KKLQLS-----SIQTHVYDSTRINTS 151 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~-s~~rl~~l~~n~-----~~~g~~-----~v~~~~~D~~~~~~~ 151 (397)
..++.+|||+|||+|..+..++.. +.++|+|+|+ |+.+++.+++|+ +.+|+. ++++...|.......
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 457889999999999999988774 3459999999 899999999999 666664 677776665432110
Q ss_pred chhhHHHhhhcccCccEEEE-cCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc---
Q psy17793 152 SQIDIERMKLQKESFDRILL-DAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK--- 227 (397)
Q Consensus 152 ~~~d~~~~~~~~~~fD~Il~-DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk--- 227 (397)
. ...+..++||+|++ |+.+. . .. ...+++. +.++||
T Consensus 155 ----~-~~~~~~~~fD~Ii~~dvl~~-----------~------~~-------~~~ll~~-----------l~~~Lk~~~ 194 (281)
T 3bzb_A 155 ----L-QRCTGLQRFQVVLLADLLSF-----------H------QA-------HDALLRS-----------VKMLLALPA 194 (281)
T ss_dssp ----H-HHHHSCSSBSEEEEESCCSC-----------G------GG-------HHHHHHH-----------HHHHBCCTT
T ss_pred ----H-HhhccCCCCCEEEEeCcccC-----------h------HH-------HHHHHHH-----------HHHHhcccC
Confidence 0 00012468999987 65421 0 11 1455666 778899
Q ss_pred C--CcEEEEEecCCCc---cccHHHHHHHHHHCCC-cEEEec
Q psy17793 228 K--DGILVYCTCSLSV---EENEAVIAWILHRHPE-VELVQT 263 (397)
Q Consensus 228 p--gG~lvysTCS~~~---eEnE~vV~~~L~~~~~-~~l~~~ 263 (397)
| ||+++++.+...+ +..++.. ..+++. + +++..+
T Consensus 195 p~~gG~l~v~~~~~~~~~~~~~~~~~-~~l~~~-G~f~v~~~ 234 (281)
T 3bzb_A 195 NDPTAVALVTFTHHRPHLAERDLAFF-RLVNAD-GALIAEPW 234 (281)
T ss_dssp TCTTCEEEEEECC--------CTHHH-HHHHHS-TTEEEEEE
T ss_pred CCCCCEEEEEEEeeecccchhHHHHH-HHHHhc-CCEEEEEe
Confidence 9 9987665333222 2223333 355665 5 776655
No 212
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.01 E-value=1.6e-09 Score=101.57 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.+++++. +++++.+|+..+. + .
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~-----------~-~ 108 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFS-----------L-G 108 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCC-----------C-S
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCC-----------c-c
Confidence 45689999999999999988774 4589999999999999988743 6889999998763 2 5
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
++||+|++... ...... + ... ..++|++ +.++|||||.++.++
T Consensus 109 ~~fD~v~~~~~---------~l~~~~--~-~~~-------~~~~l~~-----------~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 109 RRFSAVTCMFS---------SIGHLA--G-QAE-------LDAALER-----------FAAHVLPDGVVVVEP 151 (263)
T ss_dssp CCEEEEEECTT---------GGGGSC--H-HHH-------HHHHHHH-----------HHHTEEEEEEEEECC
T ss_pred CCcCEEEEcCc---------hhhhcC--C-HHH-------HHHHHHH-----------HHHhcCCCcEEEEEe
Confidence 78999998431 000010 0 011 2567778 899999999999864
No 213
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=8.1e-10 Score=106.63 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=81.6
Q ss_pred cCCCCCCeEEEEcC------CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEE-EEcccccccccch
Q psy17793 81 LDVQPGQKVLDMCA------APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQT-HVYDSTRINTSSQ 153 (397)
Q Consensus 81 L~~~~g~~VLDlca------gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~-~~~D~~~~~~~~~ 153 (397)
+.+++|++|||+|| |||+ ..++.+++..++|+|+|+++. +.++++ +++|+....
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~---- 119 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVH---- 119 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCC----
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCC----
Confidence 46788999999999 6687 556677665789999999998 246778 999987652
Q ss_pred hhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEE
Q psy17793 154 IDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILV 233 (397)
Q Consensus 154 ~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lv 233 (397)
+ .++||+|++|+++...|.... .... . ..+..++|+. +.++|||||+++
T Consensus 120 -------~-~~~fD~Vvsn~~~~~~g~~~~--d~~~------~----~~l~~~~l~~-----------a~r~LkpGG~~v 168 (290)
T 2xyq_A 120 -------T-ANKWDLIISDMYDPRTKHVTK--ENDS------K----EGFFTYLCGF-----------IKQKLALGGSIA 168 (290)
T ss_dssp -------C-SSCEEEEEECCCCCC---CCS--CCCC------C----CTHHHHHHHH-----------HHHHEEEEEEEE
T ss_pred -------c-cCcccEEEEcCCccccccccc--cccc------h----HHHHHHHHHH-----------HHHhcCCCcEEE
Confidence 1 257999999987665553210 0001 0 0112466777 999999999999
Q ss_pred EEecCCCccccHHHHHHHHHHC
Q psy17793 234 YCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 234 ysTCS~~~eEnE~vV~~~L~~~ 255 (397)
..+- .....+ .+.+.++++
T Consensus 169 ~~~~--~~~~~~-~l~~~l~~~ 187 (290)
T 2xyq_A 169 VKIT--EHSWNA-DLYKLMGHF 187 (290)
T ss_dssp EEEC--SSSCCH-HHHHHHTTE
T ss_pred EEEe--ccCCHH-HHHHHHHHc
Confidence 8642 233334 444566654
No 214
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.01 E-value=6e-10 Score=105.70 Aligned_cols=90 Identities=18% Similarity=0.136 Sum_probs=72.9
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCH-------HHHHHHHHHHHHhCCCc-EEEEEcccc
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSK-------PRVTKLEETIKKLQLSS-IQTHVYDST 146 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~-------~rl~~l~~n~~~~g~~~-v~~~~~D~~ 146 (397)
.++..++.+.++++|||+|||+|..+..+|.. +++|+++|+|+ .+++.+++|++.+++.+ |+++++|+.
T Consensus 73 ~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~ 149 (258)
T 2r6z_A 73 ELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAA 149 (258)
T ss_dssp CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHH
T ss_pred HHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHH
Confidence 34445556677889999999999999999984 46899999999 99999999999988865 999999997
Q ss_pred cccccchhhHHHhhhcc--cCccEEEEcCCCC
Q psy17793 147 RINTSSQIDIERMKLQK--ESFDRILLDAPCS 176 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~~--~~fD~Il~DpPCS 176 (397)
.+.. .+.. ++||+|++|||..
T Consensus 150 ~~l~---------~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 150 EQMP---------ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHH---------HHHHHHCCCSEEEECCCC-
T ss_pred HHHH---------hhhccCCCccEEEECCCCC
Confidence 6531 1222 5899999999853
No 215
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=3.2e-09 Score=106.61 Aligned_cols=85 Identities=12% Similarity=0.179 Sum_probs=72.0
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCC-------------------------------------CcEEEEEeCCHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMND-------------------------------------TGTLIALDKSKP 121 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~-------------------------------------~~~V~avD~s~~ 121 (397)
......++..|||.+||+|..++.+|....+ ..+|+|+|+|+.
T Consensus 195 ~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 195 LLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 4556678899999999999999988876432 146999999999
Q ss_pred HHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 122 RVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 122 rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
+++.+++|++.+|+.+ |++.+.|+..+. ...+||+|++|||+
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~~~------------~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVADFQ------------TEDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGGCC------------CCCCSCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHhCC------------CCCCCCEEEECCCC
Confidence 9999999999999975 999999998763 23579999999995
No 216
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.00 E-value=7e-10 Score=111.82 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL--QLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~--g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+|.+|||+|||+|..+..+|.. ..+|+++|+|+.+++.+++|++.+ |+++++++++|+..... ..
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~---------~~ 159 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLP---------LI 159 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHH---------HH
T ss_pred CCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhh---------hc
Confidence 35899999999999999988874 479999999999999999999999 99889999999987531 11
Q ss_pred cccCccEEEEcCCCCCC
Q psy17793 162 QKESFDRILLDAPCSGF 178 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~ 178 (397)
...+||+|++|||..+.
T Consensus 160 ~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 160 KTFHPDYIYVDPARRSG 176 (410)
T ss_dssp HHHCCSEEEECCEEC--
T ss_pred cCCCceEEEECCCCcCC
Confidence 23579999999998774
No 217
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.00 E-value=6.5e-10 Score=110.09 Aligned_cols=133 Identities=16% Similarity=0.207 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC---CC-----cEEEEEcccccccccchhhH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ---LS-----SIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g---~~-----~v~~~~~D~~~~~~~~~~d~ 156 (397)
.+.+|||+|+|.|+.+..+++. +..+|+++|+|+..++.+++++..++ ++ +++++.+|+..+...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~--~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~----- 260 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR----- 260 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH-----
T ss_pred CCCEEEEEECChhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh-----
Confidence 4679999999999999888775 34789999999999999999976442 22 599999999887521
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
.....++||+|++|||-...|..| ..+. ..+.-+.+++. +.++|+|||.++..+
T Consensus 261 --~~~~~~~fDvII~D~~d~P~~~~p------------~~L~-t~eFy~~~~~~-----------~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 261 --YAKEGREFDYVINDLTAVPISTSP------------EEDS-TWEFLRLILDL-----------SMKVLKQDGKYFTQG 314 (364)
T ss_dssp --HHHHTCCEEEEEEECCSSCCCCC----------------C-HHHHHHHHHHH-----------HHHTEEEEEEEEEEE
T ss_pred --hhccCCCceEEEECCCCcccCcCc------------hhhh-HHHHHHHHHHH-----------HHhhCCCCcEEEEEc
Confidence 000246899999999731111111 1110 01222445555 788999999999999
Q ss_pred cCCCccccHHHHHH
Q psy17793 237 CSLSVEENEAVIAW 250 (397)
Q Consensus 237 CS~~~eEnE~vV~~ 250 (397)
||.+..|--...+.
T Consensus 315 ~s~~~~e~~~~~~~ 328 (364)
T 2qfm_A 315 NCVNLTEALSLYEE 328 (364)
T ss_dssp EETTCHHHHHHHHH
T ss_pred CCcchHHHHHHHHH
Confidence 99877443333443
No 218
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=1e-09 Score=107.07 Aligned_cols=136 Identities=12% Similarity=0.086 Sum_probs=97.2
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCc
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESF 166 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~f 166 (397)
.+|||+|||.|+.+..+++.. +..+|+++|+|+..++.+++++....-.+++++.+|+..+... +..++|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~---------~~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES---------FTPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT---------CCTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh---------ccCCCC
Confidence 399999999999999999865 4569999999999999999987654445799999999876421 234689
Q ss_pred cEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc-cccH
Q psy17793 167 DRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV-EENE 245 (397)
Q Consensus 167 D~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~-eEnE 245 (397)
|+|++|..... +. | ..+ ...++++. +.++|||||+++..+.+... +...
T Consensus 161 DvIi~D~~~~~-~~-~------------~~L-----~t~efl~~-----------~~r~LkpgGvlv~~~~~~~~~~~~~ 210 (317)
T 3gjy_A 161 DVIIRDVFAGA-IT-P------------QNF-----TTVEFFEH-----------CHRGLAPGGLYVANCGDHSDLRGAK 210 (317)
T ss_dssp EEEEECCSTTS-CC-C------------GGG-----SBHHHHHH-----------HHHHEEEEEEEEEEEEECTTCHHHH
T ss_pred CEEEECCCCcc-cc-c------------hhh-----hHHHHHHH-----------HHHhcCCCcEEEEEecCCcchHHHH
Confidence 99999975221 10 0 000 01456666 88999999999988765322 1224
Q ss_pred HHHHHHHHHCCCcEEEe
Q psy17793 246 AVIAWILHRHPEVELVQ 262 (397)
Q Consensus 246 ~vV~~~L~~~~~~~l~~ 262 (397)
.+++.+-+.++.+.++.
T Consensus 211 ~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 211 SELAGMMEVFEHVAVIA 227 (317)
T ss_dssp HHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHHCCceEEEE
Confidence 56666667787666654
No 219
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.99 E-value=6.1e-10 Score=103.09 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=76.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.+++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++ +.+...|+.... .++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~---------~~~~ 98 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYL---------KSLP 98 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHH---------HTSC
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHh---------hhcC
Confidence 467889999999999999988885 45799999999999998876 577778776542 1245
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
.++||+|++.-- ..... ...+ ..+|++ +.++|||||+++.++..
T Consensus 99 ~~~fD~i~~~~~----------l~~~~----~~~~-------~~~l~~-----------~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 99 DKYLDGVMISHF----------VEHLD----PERL-------FELLSL-----------CYSKMKYSSYIVIESPN 142 (240)
T ss_dssp TTCBSEEEEESC----------GGGSC----GGGH-------HHHHHH-----------HHHHBCTTCCEEEEEEC
T ss_pred CCCeeEEEECCc----------hhhCC----cHHH-------HHHHHH-----------HHHHcCCCcEEEEEeCC
Confidence 678999997211 11111 0111 556777 88999999999998754
No 220
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.99 E-value=5.5e-10 Score=104.14 Aligned_cols=142 Identities=18% Similarity=0.071 Sum_probs=94.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC---------------------------
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL--------------------------- 135 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~--------------------------- 135 (397)
..++.+|||+|||+|..+..++.. ...+|+++|+|+.+++.++++++..+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACE--SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhc--ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 356789999999999999877764 224899999999999999988865431
Q ss_pred --CcE-EEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHh
Q psy17793 136 --SSI-QTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVY 212 (397)
Q Consensus 136 --~~v-~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~ 212 (397)
.++ .+..+|+...... +....++||+|++.-- + ..+.........+|++
T Consensus 132 l~~~v~~~~~~d~~~~~~~-------~~~~~~~fD~v~~~~~------------------l-~~~~~~~~~~~~~l~~-- 183 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPL-------GGVSLPPADCLLSTLC------------------L-DAACPDLPAYRTALRN-- 183 (265)
T ss_dssp HHHHEEEEEECCTTSSSTT-------TTCCCCCEEEEEEESC------------------H-HHHCSSHHHHHHHHHH--
T ss_pred hhhhheeEEEeeeccCCCC-------CccccCCccEEEEhhh------------------h-hhhcCChHHHHHHHHH--
Confidence 127 8889998765210 0112268999997211 1 1111011122677888
Q ss_pred hhhccccccccccccCCcEEEEEecCC------------CccccHHHHHHHHHHCCCcEEEecC
Q psy17793 213 RFVSLFDWQGIPLLKKDGILVYCTCSL------------SVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 213 ~f~~~~~~~a~~lLkpgG~lvysTCS~------------~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
+.++|||||+|++++..- ...-+++.+..++++. +++++.+.
T Consensus 184 ---------~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 237 (265)
T 2i62_A 184 ---------LGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEA-GYTIEQFE 237 (265)
T ss_dssp ---------HHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TCEEEEEE
T ss_pred ---------HHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHC-CCEEEEEE
Confidence 999999999999886321 1112455666777776 57666543
No 221
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.99 E-value=2.3e-09 Score=102.49 Aligned_cols=88 Identities=22% Similarity=0.230 Sum_probs=71.4
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...|++++|..+||+++|.|+.|..+++. +++|+|+|.|+.+++.+++ ++. .+++++.+|+.++...
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~----- 81 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRH----- 81 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHH-----
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHH-----
Confidence 345677899999999999999999999996 5799999999999999988 644 5799999999876311
Q ss_pred HHhhhcccCccEEEEcCCCCC
Q psy17793 157 ERMKLQKESFDRILLDAPCSG 177 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg 177 (397)
......++||.|++|..+|+
T Consensus 82 -L~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 82 -LAALGVERVDGILADLGVSS 101 (285)
T ss_dssp -HHHTTCSCEEEEEEECSCCH
T ss_pred -HHHcCCCCcCEEEeCCcccc
Confidence 01112257999999999988
No 222
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.99 E-value=9.8e-09 Score=101.26 Aligned_cols=112 Identities=19% Similarity=0.141 Sum_probs=87.4
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..++..++.+|||+|||+|..+..++... +..+++++|+ +.+++.+++++.+.|+. +|++..+|+...
T Consensus 176 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------- 244 (374)
T 1qzz_A 176 DAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP--------- 244 (374)
T ss_dssp HTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---------
T ss_pred HhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---------
Confidence 34556778899999999999999999875 4579999999 99999999999999986 699999998653
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
++ ..||+|++.-. ...+. ... ..++|++ +.++|||||++++...
T Consensus 245 ---~~-~~~D~v~~~~v----------l~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 245 ---LP-VTADVVLLSFV----------LLNWS----DED-------ALTILRG-----------CVRALEPGGRLLVLDR 288 (374)
T ss_dssp ---CS-CCEEEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEC
T ss_pred ---CC-CCCCEEEEecc----------ccCCC----HHH-------HHHHHHH-----------HHHhcCCCcEEEEEec
Confidence 12 24999998322 22222 111 1467888 8999999999988765
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.98 E-value=2.3e-10 Score=109.64 Aligned_cols=108 Identities=14% Similarity=0.036 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--EcccccccccchhhHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETI---KKLQLSSIQTH--VYDSTRINTSSQIDIE 157 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~---~~~g~~~v~~~--~~D~~~~~~~~~~d~~ 157 (397)
+++|.+|||+|||||+++..++.. ++|+|+|+++ ++..++++. +.++ .++.++ .+|+..+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l--------- 144 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKM--------- 144 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGC---------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhC---------
Confidence 568899999999999999988874 6899999998 432222110 0011 167888 8888765
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc--EEEEE
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG--ILVYC 235 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG--~lvys 235 (397)
+.++||+|++|.. ..++. ........ .++|.. +.++||||| .++..
T Consensus 145 ----~~~~fD~Vvsd~~-~~~~~--------------~~~d~~~~--l~~L~~-----------~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 145 ----EPFQADTVLCDIG-ESNPT--------------AAVEASRT--LTVLNV-----------ISRWLEYNQGCGFCVK 192 (276)
T ss_dssp ----CCCCCSEEEECCC-CCCSC--------------HHHHHHHH--HHHHHH-----------HHHHHHHSTTCEEEEE
T ss_pred ----CCCCcCEEEECCC-cCCCc--------------hhhhHHHH--HHHHHH-----------HHHHhccCCCcEEEEE
Confidence 3468999999875 22211 11111111 126677 889999999 98886
Q ss_pred ec
Q psy17793 236 TC 237 (397)
Q Consensus 236 TC 237 (397)
+.
T Consensus 193 ~~ 194 (276)
T 2wa2_A 193 VL 194 (276)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 224
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=2.2e-10 Score=107.75 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=82.5
Q ss_pred HHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchh
Q psy17793 75 ILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 75 ~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~ 154 (397)
..+...+...++.+|||+|||+|..+..++. ...+|+|+|+|+.+++.++++. ++++...|+..+.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~----- 89 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA----- 89 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC-----
T ss_pred HHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC-----
Confidence 3444556677899999999999999999887 4579999999999988776543 7899999997753
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
+..++||+|++.-. ..... . ..++|++ +.++|| ||.+++
T Consensus 90 ------~~~~~fD~v~~~~~----------l~~~~------------~-~~~~l~~-----------~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 90 ------LPDKSVDGVISILA----------IHHFS------------H-LEKSFQE-----------MQRIIR-DGTIVL 128 (261)
T ss_dssp ------SCTTCBSEEEEESC----------GGGCS------------S-HHHHHHH-----------HHHHBC-SSCEEE
T ss_pred ------CCCCCEeEEEEcch----------Hhhcc------------C-HHHHHHH-----------HHHHhC-CcEEEE
Confidence 45578999998332 11111 1 1567777 899999 998888
Q ss_pred EecC
Q psy17793 235 CTCS 238 (397)
Q Consensus 235 sTCS 238 (397)
.++.
T Consensus 129 ~~~~ 132 (261)
T 3ege_A 129 LTFD 132 (261)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8765
No 225
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.97 E-value=8.8e-09 Score=99.84 Aligned_cols=115 Identities=16% Similarity=0.157 Sum_probs=87.9
Q ss_pred ccCC--CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhH
Q psy17793 80 YLDV--QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 80 ~L~~--~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~ 156 (397)
.++. .++.+|||+|||+|..+..++... +..+++++|++ ..++.+++++.+.++. ++++..+|+....
T Consensus 158 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------- 228 (335)
T 2r3s_A 158 LVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD------- 228 (335)
T ss_dssp HHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-------
T ss_pred hcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-------
Confidence 3455 678899999999999999999875 45799999999 9999999999999986 4999999987642
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+. ..||+|++.- ....++ ... ..++|++ +.++|||||+++...
T Consensus 229 ----~~-~~~D~v~~~~----------~l~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 229 ----YG-NDYDLVLLPN----------FLHHFD----VAT-------CEQLLRK-----------IKTALAVEGKVIVFD 271 (335)
T ss_dssp ----CC-SCEEEEEEES----------CGGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred ----CC-CCCcEEEEcc----------hhccCC----HHH-------HHHHHHH-----------HHHhCCCCcEEEEEe
Confidence 22 3499999821 122222 121 2567888 899999999988876
Q ss_pred cCCC
Q psy17793 237 CSLS 240 (397)
Q Consensus 237 CS~~ 240 (397)
....
T Consensus 272 ~~~~ 275 (335)
T 2r3s_A 272 FIPN 275 (335)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 5443
No 226
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.97 E-value=9.7e-10 Score=99.62 Aligned_cols=107 Identities=19% Similarity=0.172 Sum_probs=77.1
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.+...++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++ .++.+...|+..+... +
T Consensus 47 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~-------~ 110 (227)
T 3e8s_A 47 AILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEA-------K 110 (227)
T ss_dssp HHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTT-------C
T ss_pred HhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccc-------c
Confidence 334456789999999999999988875 46899999999999999877 3466777777654210 1
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
.....+||+|++..... .. +. ..+|++ +.++|||||++++++-
T Consensus 111 ~~~~~~fD~v~~~~~l~-----------~~--~~-----------~~~l~~-----------~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 111 VPVGKDYDLICANFALL-----------HQ--DI-----------IELLSA-----------MRTLLVPGGALVIQTL 153 (227)
T ss_dssp SCCCCCEEEEEEESCCC-----------SS--CC-----------HHHHHH-----------HHHTEEEEEEEEEEEC
T ss_pred cccCCCccEEEECchhh-----------hh--hH-----------HHHHHH-----------HHHHhCCCeEEEEEec
Confidence 12334599999854310 01 11 456777 8899999999999864
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=2.5e-10 Score=108.74 Aligned_cols=127 Identities=14% Similarity=0.011 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--EcccccccccchhhHH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETI---KKLQLSSIQTH--VYDSTRINTSSQIDIE 157 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~---~~~g~~~v~~~--~~D~~~~~~~~~~d~~ 157 (397)
+++|.+|||+|||||+++..++.. ++|+|+|+++ ++..++++. +.++ .++.++ .+|++.+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l--------- 136 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTL--------- 136 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTS---------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHC---------
Confidence 578999999999999999888874 6899999998 322221110 0111 167888 8888765
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc--EEEEE
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG--ILVYC 235 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG--~lvys 235 (397)
..++||+|++|.. ..+|. ..+..... ..+|.. +.++||||| .++..
T Consensus 137 ----~~~~fD~V~sd~~-~~~~~--------------~~~d~~~~--l~~L~~-----------~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 137 ----PVERTDVIMCDVG-ESSPK--------------WSVESERT--IKILEL-----------LEKWKVKNPSADFVVK 184 (265)
T ss_dssp ----CCCCCSEEEECCC-CCCSC--------------HHHHHHHH--HHHHHH-----------HHHHHHHCTTCEEEEE
T ss_pred ----CCCCCcEEEEeCc-ccCCc--------------cchhHHHH--HHHHHH-----------HHHHhccCCCeEEEEE
Confidence 2468999999875 22211 11111111 126666 889999999 99886
Q ss_pred ecCCCccccH---HHHHHHHHHCCCcE
Q psy17793 236 TCSLSVEENE---AVIAWILHRHPEVE 259 (397)
Q Consensus 236 TCS~~~eEnE---~vV~~~L~~~~~~~ 259 (397)
+ +. .++. +.+..+.+.+..+.
T Consensus 185 v--~~-~~~~~~~~~l~~l~~~f~~v~ 208 (265)
T 2oxt_A 185 V--LC-PYSVEVMERLSVMQRKWGGGL 208 (265)
T ss_dssp E--SC-TTSHHHHHHHHHHHHHHCCEE
T ss_pred e--CC-CCChhHHHHHHHHHHHcCCEE
Confidence 4 33 3444 44444444454433
No 228
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.96 E-value=1.1e-09 Score=117.77 Aligned_cols=117 Identities=11% Similarity=0.064 Sum_probs=87.4
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEEcccccccc
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL------QLSSIQTHVYDSTRINT 150 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~------g~~~v~~~~~D~~~~~~ 150 (397)
+...+...++.+|||+|||+|..+..++...++..+|+|+|+|+.+++.++++++.. +..+|+++.+|+..+.
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp- 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD- 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC-
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC-
Confidence 344555568899999999999999988876433479999999999999999987754 6678999999998763
Q ss_pred cchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc
Q psy17793 151 SSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG 230 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG 230 (397)
+..+.||+|++.-- ..... .. ....++++ +.++||||
T Consensus 792 ----------~~d~sFDlVV~~eV----------LeHL~----dp-------~l~~~L~e-----------I~RvLKPG- 828 (950)
T 3htx_A 792 ----------SRLHDVDIGTCLEV----------IEHME----ED-------QACEFGEK-----------VLSLFHPK- 828 (950)
T ss_dssp ----------TTSCSCCEEEEESC----------GGGSC----HH-------HHHHHHHH-----------HHHTTCCS-
T ss_pred ----------cccCCeeEEEEeCc----------hhhCC----hH-------HHHHHHHH-----------HHHHcCCC-
Confidence 34578999998221 11111 11 11456777 89999999
Q ss_pred EEEEEec
Q psy17793 231 ILVYCTC 237 (397)
Q Consensus 231 ~lvysTC 237 (397)
.++++|.
T Consensus 829 ~LIISTP 835 (950)
T 3htx_A 829 LLIVSTP 835 (950)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8888764
No 229
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.96 E-value=1.2e-09 Score=109.15 Aligned_cols=116 Identities=20% Similarity=0.239 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.+|.+|||+|||+|..++.+|+. +..+|+|+|.|+ +++.++++++.+|+.+ |+++.+|+..+. .
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~------------l 146 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE------------L 146 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC------------C
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec------------C
Confidence 46899999999999998876663 567999999996 7899999999999975 999999998763 3
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC--
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS-- 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~-- 240 (397)
+++||+|+++.- |.+.. . +..+ ..++.. .-++|||||+++-+.++++
T Consensus 147 pe~~DvivsE~~--~~~l~-----~------e~~l-------~~~l~a-----------~~r~Lkp~G~~iP~~atly~a 195 (376)
T 4hc4_A 147 PEQVDAIVSEWM--GYGLL-----H------ESML-------SSVLHA-----------RTKWLKEGGLLLPASAELFIV 195 (376)
T ss_dssp SSCEEEEECCCC--BTTBT-----T------TCSH-------HHHHHH-----------HHHHEEEEEEEESCEEEEEEE
T ss_pred CccccEEEeecc--ccccc-----c------cchh-------hhHHHH-----------HHhhCCCCceECCccceEEEE
Confidence 468999997543 11100 0 0111 233444 5689999999988877754
Q ss_pred ccccH
Q psy17793 241 VEENE 245 (397)
Q Consensus 241 ~eEnE 245 (397)
+-|.+
T Consensus 196 pie~~ 200 (376)
T 4hc4_A 196 PISDQ 200 (376)
T ss_dssp EECCH
T ss_pred Eeccc
Confidence 44544
No 230
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.95 E-value=4.6e-10 Score=101.52 Aligned_cols=99 Identities=18% Similarity=0.214 Sum_probs=75.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..+ +..+|+++|+|+.+++.+++++ .++.+...|+..+. +..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~-----------~~~~ 94 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP-----------FPGE 94 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC-----------SCSS
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC-----------CCCC
Confidence 7889999999999988765 2238999999999999998876 56788888887652 3457
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+||+|++.-. ..... . ..++|++ +.++|||||.+++++..
T Consensus 95 ~fD~v~~~~~----------l~~~~---------~----~~~~l~~-----------~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 95 SFDVVLLFTT----------LEFVE---------D----VERVLLE-----------ARRVLRPGGALVVGVLE 134 (211)
T ss_dssp CEEEEEEESC----------TTTCS---------C----HHHHHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCh----------hhhcC---------C----HHHHHHH-----------HHHHcCCCCEEEEEecC
Confidence 8999997432 00001 0 1466777 88999999999998643
No 231
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.95 E-value=3.2e-09 Score=110.61 Aligned_cols=110 Identities=17% Similarity=0.107 Sum_probs=88.1
Q ss_pred CCCcEEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCC------------CcEEEEEeCCHHHHHHHHHHH
Q psy17793 63 DSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMND------------TGTLIALDKSKPRVTKLEETI 130 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~------------~~~V~avD~s~~rl~~l~~n~ 130 (397)
..|.||-...-+.+++.++.+++|++|+|-|||+|++.+.+...+.. ...++|+|+++.....++.|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 46888888888889999999999999999999999999887765532 246999999999999999999
Q ss_pred HHhCCCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCC
Q psy17793 131 KKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFG 179 (397)
Q Consensus 131 ~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G 179 (397)
-..|+..-.+..+|....... ......+||+|+.|||.++..
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~-------~~~~~~~fD~Il~NPPf~~~~ 316 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLR-------EMGDKDRVDVILTNPPFGGEE 316 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGG-------GCCGGGCBSEEEECCCSSCBC
T ss_pred HhcCCccccccccccccCchh-------hhcccccceEEEecCCCCccc
Confidence 999987667778887654211 011235799999999997653
No 232
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.94 E-value=6.3e-10 Score=106.45 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=75.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHc---CCCcEE--EEEeCCHHHHHHHHHHHHHh-CCCcEEEEEcc--cccccccchh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLM---NDTGTL--IALDKSKPRVTKLEETIKKL-QLSSIQTHVYD--STRINTSSQI 154 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~---~~~~~V--~avD~s~~rl~~l~~n~~~~-g~~~v~~~~~D--~~~~~~~~~~ 154 (397)
+.++.+|||+|||+|..+..++..+ .+...| +++|.|+.+++.++++++.. ++.++.+...+ +..+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~---- 125 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQS---- 125 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHH----
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhh----
Confidence 3567899999999998876554332 134544 99999999999999998764 66776654333 322100
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
....++..++||+|++-- ..... .+. .+.|++ +.++|||||+++.
T Consensus 126 -~~~~~~~~~~fD~V~~~~----------~l~~~------------~d~-~~~l~~-----------~~r~LkpgG~l~i 170 (292)
T 2aot_A 126 -RMLEKKELQKWDFIHMIQ----------MLYYV------------KDI-PATLKF-----------FHSLLGTNAKMLI 170 (292)
T ss_dssp -HHHTTTCCCCEEEEEEES----------CGGGC------------SCH-HHHHHH-----------HHHTEEEEEEEEE
T ss_pred -hhccccCCCceeEEEEee----------eeeec------------CCH-HHHHHH-----------HHHHcCCCcEEEE
Confidence 000013457899999711 11111 111 456777 8999999999998
Q ss_pred EecC
Q psy17793 235 CTCS 238 (397)
Q Consensus 235 sTCS 238 (397)
++.+
T Consensus 171 ~~~~ 174 (292)
T 2aot_A 171 IVVS 174 (292)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8543
No 233
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.94 E-value=5.6e-09 Score=102.56 Aligned_cols=113 Identities=19% Similarity=0.118 Sum_probs=87.3
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..++..++.+|||+|||+|..+..++... +..+++++|+ +.+++.++++++..|+. ++++..+|+...
T Consensus 177 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------- 245 (360)
T 1tw3_A 177 AAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP--------- 245 (360)
T ss_dssp HHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---------
T ss_pred HhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---------
Confidence 34456778899999999999999999875 4578999999 99999999999999986 699999998753
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
++ ..||+|++.-. ...+. ... ..++|++ +.++|||||++++...
T Consensus 246 ---~~-~~~D~v~~~~v----------l~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 246 ---LP-RKADAIILSFV----------LLNWP----DHD-------AVRILTR-----------CAEALEPGGRILIHER 289 (360)
T ss_dssp ---CS-SCEEEEEEESC----------GGGSC----HHH-------HHHHHHH-----------HHHTEEEEEEEEEEEC
T ss_pred ---CC-CCccEEEEccc----------ccCCC----HHH-------HHHHHHH-----------HHHhcCCCcEEEEEEE
Confidence 12 34999997322 22222 111 1567888 8999999999998765
Q ss_pred C
Q psy17793 238 S 238 (397)
Q Consensus 238 S 238 (397)
.
T Consensus 290 ~ 290 (360)
T 1tw3_A 290 D 290 (360)
T ss_dssp C
T ss_pred e
Confidence 4
No 234
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.94 E-value=3.3e-09 Score=102.63 Aligned_cols=87 Identities=14% Similarity=0.150 Sum_probs=73.6
Q ss_pred hHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc
Q psy17793 73 PSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS 152 (397)
Q Consensus 73 ~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~ 152 (397)
....++..+++.++++|||+|||+|..|..++.. ..+|+|+|+|+.+++.++++++ +..+++++++|+.++.
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~--- 109 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVD--- 109 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSC---
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCC---
Confidence 3445566778889999999999999999999986 4699999999999999999988 4468999999998763
Q ss_pred hhhHHHhhhcccCccEEEEcCCC
Q psy17793 153 QIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 153 ~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
+....||+|+.|+|+
T Consensus 110 --------~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 --------LNKLDFNKVVANLPY 124 (295)
T ss_dssp --------GGGSCCSEEEEECCG
T ss_pred --------cccCCccEEEEeCcc
Confidence 334579999999993
No 235
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.94 E-value=4.7e-09 Score=101.26 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-------CCCcEEEEEcccccccccchhhH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-------QLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-------g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++.... +..++.++++|+......
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~----- 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI----- 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST-----
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh-----
Confidence 36789999999999999988873 4679999999999999999998876 445799999999765200
Q ss_pred HHhhh--cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 157 ERMKL--QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 157 ~~~~~--~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
.++ ..++||+|++.-. .+|. .... . ....+|.+ +.++|||||.++.
T Consensus 106 --~~~~~~~~~fD~V~~~~~-----------l~~~----~~~~---~-~~~~~l~~-----------~~~~LkpgG~li~ 153 (313)
T 3bgv_A 106 --DKFRDPQMCFDICSCQFV-----------CHYS----FESY---E-QADMMLRN-----------ACERLSPGGYFIG 153 (313)
T ss_dssp --TTCSSTTCCEEEEEEETC-----------GGGG----GGSH---H-HHHHHHHH-----------HHTTEEEEEEEEE
T ss_pred --hhcccCCCCEEEEEEecc-----------hhhc----cCCH---H-HHHHHHHH-----------HHHHhCCCcEEEE
Confidence 012 2348999997321 1110 0011 1 11567888 9999999999999
Q ss_pred EecC
Q psy17793 235 CTCS 238 (397)
Q Consensus 235 sTCS 238 (397)
+|..
T Consensus 154 ~~~~ 157 (313)
T 3bgv_A 154 TTPN 157 (313)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 8654
No 236
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.94 E-value=2e-08 Score=97.71 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=85.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++...++ ++|++..+|+... +
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------~ 232 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP------------L 232 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC------------C
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC------------C
Confidence 3456899999999999999999875 4578999999 9999999999999987 4699999998632 2
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
+ ..||+|++- .....|. .. .+.++|++ +.+.|||||+|+......
T Consensus 233 p-~~~D~v~~~----------~vlh~~~----~~-------~~~~~l~~-----------~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 233 P-AGAGGYVLS----------AVLHDWD----DL-------SAVAILRR-----------CAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp C-CSCSEEEEE----------SCGGGSC----HH-------HHHHHHHH-----------HHHHHTTTCEEEEEECCC
T ss_pred C-CCCcEEEEe----------hhhccCC----HH-------HHHHHHHH-----------HHHhcCCCCEEEEEeecC
Confidence 2 279999971 2222333 22 12678888 999999999999876543
No 237
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.93 E-value=1.6e-09 Score=105.84 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=73.0
Q ss_pred HHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 77 AGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 77 ~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
+...|.+++|+.++|+++|.||.|..+++.+++.|+|+|+|.|+.+++.++ ++ .-.+++++.+++.++...
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~----- 119 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEY----- 119 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHH-----
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHH-----
Confidence 345677899999999999999999999998888899999999999999884 33 335799999998876311
Q ss_pred HHhhh-cccCccEEEEcCCCCCC
Q psy17793 157 ERMKL-QKESFDRILLDAPCSGF 178 (397)
Q Consensus 157 ~~~~~-~~~~fD~Il~DpPCSg~ 178 (397)
.... ..+++|.||+|-.||+.
T Consensus 120 -L~~~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 120 -VAERDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp -HHHTTCTTCEEEEEEECSCCHH
T ss_pred -HHhcCCCCcccEEEECCccCHH
Confidence 0001 11369999999999984
No 238
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.91 E-value=2.5e-08 Score=98.10 Aligned_cols=114 Identities=9% Similarity=0.125 Sum_probs=88.2
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~ 157 (397)
..++..++.+|||+|||+|..+..++... +..+++++|+ +.+++.+++++++.++.+ +++..+|+....
T Consensus 184 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------- 253 (359)
T 1x19_A 184 EEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES-------- 253 (359)
T ss_dssp HHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC--------
T ss_pred HhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC--------
Confidence 34556778899999999999999999875 4579999999 999999999999999865 999999997642
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
+. .+|+|++.- ....+. .. ...++|++ +.+.|||||+++....
T Consensus 254 ---~~--~~D~v~~~~----------vlh~~~----d~-------~~~~~l~~-----------~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 254 ---YP--EADAVLFCR----------ILYSAN----EQ-------LSTIMCKK-----------AFDAMRSGGRLLILDM 296 (359)
T ss_dssp ---CC--CCSEEEEES----------CGGGSC----HH-------HHHHHHHH-----------HHTTCCTTCEEEEEEE
T ss_pred ---CC--CCCEEEEec----------hhccCC----HH-------HHHHHHHH-----------HHHhcCCCCEEEEEec
Confidence 22 349999722 122233 21 12677888 9999999999988765
Q ss_pred CC
Q psy17793 238 SL 239 (397)
Q Consensus 238 S~ 239 (397)
..
T Consensus 297 ~~ 298 (359)
T 1x19_A 297 VI 298 (359)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 239
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.91 E-value=4.4e-08 Score=97.04 Aligned_cols=115 Identities=13% Similarity=0.116 Sum_probs=88.8
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHH
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
.++..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++...++ ++|++..+|+...
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---------- 264 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---------- 264 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC----------
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC----------
Confidence 3455678899999999999999999875 4679999999 9999999999999987 4699999998732
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
++ ..||+|++- .....|. ... ..++|++ +.+.|||||+|+.....
T Consensus 265 --~p-~~~D~v~~~----------~vlh~~~----d~~-------~~~~L~~-----------~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 265 --IP-DGADVYLIK----------HVLHDWD----DDD-------VVRILRR-----------IATAMKPDSRLLVIDNL 309 (369)
T ss_dssp --CC-SSCSEEEEE----------SCGGGSC----HHH-------HHHHHHH-----------HHTTCCTTCEEEEEEEB
T ss_pred --CC-CCceEEEhh----------hhhccCC----HHH-------HHHHHHH-----------HHHHcCCCCEEEEEEec
Confidence 23 279999972 1222333 111 2578888 99999999999987665
Q ss_pred CCc
Q psy17793 239 LSV 241 (397)
Q Consensus 239 ~~~ 241 (397)
...
T Consensus 310 ~~~ 312 (369)
T 3gwz_A 310 IDE 312 (369)
T ss_dssp CCS
T ss_pred cCC
Confidence 443
No 240
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.91 E-value=1.8e-09 Score=101.38 Aligned_cols=101 Identities=16% Similarity=0.145 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++.. .+ +...|+..+. +..+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~-----------~~~~ 113 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLP-----------FPSG 113 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCC-----------SCTT
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCC-----------CCCC
Confidence 7889999999999999988874 4689999999999999988754 22 6778877652 3457
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
+||.|++... + .... .. ...+|++ +.++|||||+++.++.+
T Consensus 114 ~fD~v~~~~~------------------~-~~~~--~~-~~~~l~~-----------~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 114 AFEAVLALGD------------------V-LSYV--EN-KDKAFSE-----------IRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CEEEEEECSS------------------H-HHHC--SC-HHHHHHH-----------HHHHEEEEEEEEEEEEB
T ss_pred CEEEEEEcch------------------h-hhcc--cc-HHHHHHH-----------HHHHcCCCeEEEEEeCC
Confidence 8999997322 0 1110 11 2667888 89999999999998665
No 241
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.90 E-value=1e-08 Score=94.89 Aligned_cols=112 Identities=16% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
.+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.+++++ ...++++.++|+...... ..+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~-------~~~ 119 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQA-------AQI 119 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHH-------HHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccc-------ccc
Confidence 35778899999999999999999864 28999999999999999876 335799999999875311 111
Q ss_pred c-ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 162 Q-KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 162 ~-~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
. ...||+|+++.... ... ... ..++|++ +.++|||||+++.++..
T Consensus 120 ~~~~~~d~v~~~~~~~----------~~~----~~~-------~~~~l~~-----------~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 120 HSEIGDANIYMRTGFH----------HIP----VEK-------RELLGQS-----------LRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHCSCEEEEESSST----------TSC----GGG-------HHHHHHH-----------HHHHHTTTCEEEEEEEC
T ss_pred ccccCccEEEEcchhh----------cCC----HHH-------HHHHHHH-----------HHHHcCCCCEEEEEeCC
Confidence 1 13599999854311 111 111 1566777 88999999998887654
No 242
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.89 E-value=2.9e-09 Score=97.61 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++... .+|+++|+|+.+++.+++++ .++++...|+..+. + .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~-----------~-~ 98 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFR-----------L-G 98 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCC-----------C-S
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcc-----------c-C
Confidence 567899999999999999999863 38999999999999998763 46889999987652 2 4
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
++||+|++--- .+....+ .. ...++|++ +.++|||||.++.+++..
T Consensus 99 ~~~D~v~~~~~--------~~~~~~~----~~-------~~~~~l~~-----------~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 99 RKFSAVVSMFS--------SVGYLKT----TE-------ELGAAVAS-----------FAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SCEEEEEECTT--------GGGGCCS----HH-------HHHHHHHH-----------HHHTEEEEEEEEECCCCC
T ss_pred CCCcEEEEcCc--------hHhhcCC----HH-------HHHHHHHH-----------HHHhcCCCeEEEEEeccC
Confidence 68999995110 0000001 11 12567788 899999999999986653
No 243
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.89 E-value=1.8e-09 Score=116.01 Aligned_cols=150 Identities=12% Similarity=0.037 Sum_probs=95.7
Q ss_pred CCCcEEEechhHHHHHhc----cCC--CCCCeEEEEcCCCChHHHHHHHHcC--CCcEEEEEeCCHHHHHHH--HHHHHH
Q psy17793 63 DSSMGILQNLPSILAGHY----LDV--QPGQKVLDMCAAPGNKLTHIALLMN--DTGTLIALDKSKPRVTKL--EETIKK 132 (397)
Q Consensus 63 ~~g~~~~Qd~~S~l~~~~----L~~--~~g~~VLDlcagpG~kt~~lA~~~~--~~~~V~avD~s~~rl~~l--~~n~~~ 132 (397)
..|.|+....-+.+++.+ +.. .++.+|||.|||+|++.+.++..++ ....++|+|+++.+++.+ +.|+..
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLF 372 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTS
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 456666666555555555 332 4688999999999999999988764 236799999999999999 666554
Q ss_pred ----hCCCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHH---------
Q psy17793 133 ----LQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKS--------- 199 (397)
Q Consensus 133 ----~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~--------- 199 (397)
.|+.+..+...|+.... ......||+|++|||+++....+...... ...+..
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~----------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~-----~~r~~~g~p~~p~s~ 437 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLN----------PEDFANVSVVVMNPPYVSGVTDPAIKRKF-----AHKIIQLTGNRPQTL 437 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCC----------GGGGTTEEEEEECCBCCSSCCCHHHHHHH-----HHHHHHHHSSCCSSC
T ss_pred hhhhcCCCcceEEecchhccc----------ccccCCCCEEEECCCccccccchhhhhhH-----HHHhhhhcccccccc
Confidence 23333455555555421 12346799999999987533211100000 000000
Q ss_pred --HHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 200 --YANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 200 --l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
...+...++.+ +.++||+||++++.+=.
T Consensus 438 ~G~~DLy~aFIe~-----------Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 438 FGQIGVEALFLEL-----------VTELVQDGTVISAIMPK 467 (878)
T ss_dssp SSSCCHHHHHHHH-----------HHHHSCTTCEEEEEEET
T ss_pred ccccchHHHHHHH-----------HHHhcCCCcEEEEEECh
Confidence 01133567777 99999999999887543
No 244
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.89 E-value=2.6e-08 Score=98.48 Aligned_cols=114 Identities=13% Similarity=0.175 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
....+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++++.++ .+|++..+|+.... .+++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~p 246 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD---------VPFP 246 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS---------CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC---------CCCC
Confidence 456799999999999999999875 4579999999 9999999999998887 46999999987631 0122
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCc
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSV 241 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~ 241 (397)
+.||+|++- .+...|. .... .++|++ +.+.|||||+|+........
T Consensus 247 -~~~D~v~~~----------~vlh~~~----~~~~-------~~~l~~-----------~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 247 -TGFDAVWMS----------QFLDCFS----EEEV-------ISILTR-----------VAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp -CCCSEEEEE----------SCSTTSC----HHHH-------HHHHHH-----------HHHHCCTTCEEEEEECCTTS
T ss_pred -CCcCEEEEe----------chhhhCC----HHHH-------HHHHHH-----------HHHhcCCCcEEEEEeeccCC
Confidence 579999971 1222333 2221 567888 99999999999887654433
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.86 E-value=9e-09 Score=110.63 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=72.1
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcC-----------------------------------------CCcEEEEEe
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMN-----------------------------------------DTGTLIALD 117 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~-----------------------------------------~~~~V~avD 117 (397)
......++..|||.|||+|++.+.+|.... ....|+|+|
T Consensus 184 ~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~D 263 (703)
T 3v97_A 184 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 263 (703)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred HhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEE
Confidence 344567889999999999999998887531 125799999
Q ss_pred CCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 118 KSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 118 ~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
+|+.+++.+++|++++|+.+ |++.++|+..+.. +...+.||+|++|||+
T Consensus 264 id~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~---------~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 264 SDARVIQRARTNARLAGIGELITFEVKDVAQLTN---------PLPKGPYGTVLSNPPY 313 (703)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCC---------SCTTCCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChhhCcc---------ccccCCCCEEEeCCCc
Confidence 99999999999999999986 9999999987631 1222379999999997
No 246
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.86 E-value=6e-09 Score=95.11 Aligned_cols=121 Identities=14% Similarity=0.182 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
++.+|||+|||+|..+..++.. +++|+|+.+++.++++ ++++...|+..+. +..+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~-----------~~~~ 101 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLP-----------LKDE 101 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCC-----------SCTT
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCC-----------CCCC
Confidence 3789999999999998766542 9999999999998876 5788888887652 3456
Q ss_pred CccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCcc--
Q psy17793 165 SFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVE-- 242 (397)
Q Consensus 165 ~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~e-- 242 (397)
+||+|++.-. ..... . ..++|++ +.++|||||.++.++......
T Consensus 102 ~fD~v~~~~~----------l~~~~------------~-~~~~l~~-----------~~~~L~pgG~l~i~~~~~~~~~~ 147 (219)
T 1vlm_A 102 SFDFALMVTT----------ICFVD------------D-PERALKE-----------AYRILKKGGYLIVGIVDRESFLG 147 (219)
T ss_dssp CEEEEEEESC----------GGGSS------------C-HHHHHHH-----------HHHHEEEEEEEEEEEECSSSHHH
T ss_pred CeeEEEEcch----------Hhhcc------------C-HHHHHHH-----------HHHHcCCCcEEEEEEeCCccHHH
Confidence 8999998432 00011 1 1456777 889999999999986542111
Q ss_pred ------------------ccHHHHHHHHHHCCCcEEEecCc
Q psy17793 243 ------------------ENEAVIAWILHRHPEVELVQTLP 265 (397)
Q Consensus 243 ------------------EnE~vV~~~L~~~~~~~l~~~~~ 265 (397)
-+.+.+..++++. +++.+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gf~~~~~~~ 187 (219)
T 1vlm_A 148 REYEKNKEKSVFYKNARFFSTEELMDLMRKA-GFEEFKVVQ 187 (219)
T ss_dssp HHHHHTTTC-CCSTTCCCCCHHHHHHHHHHT-TCEEEEEEE
T ss_pred HHHHHHhcCcchhcccccCCHHHHHHHHHHC-CCeEEEEec
Confidence 1345566677776 576665543
No 247
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.85 E-value=3.6e-09 Score=99.41 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++..+ ++.+|+++|+|+.+++.++++. .++.+...|+..+. +..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~-----------~~~ 146 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLP-----------FSD 146 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCS-----------BCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCC-----------CCC
Confidence 578899999999999999999875 3569999999999999988763 46788888887652 345
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
++||+|++... ...+++ +.++|||||+++.++-.
T Consensus 147 ~~fD~v~~~~~------------------------------~~~l~~-----------~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 147 TSMDAIIRIYA------------------------------PCKAEE-----------LARVVKPGGWVITATPG 180 (269)
T ss_dssp TCEEEEEEESC------------------------------CCCHHH-----------HHHHEEEEEEEEEEEEC
T ss_pred CceeEEEEeCC------------------------------hhhHHH-----------HHHhcCCCcEEEEEEcC
Confidence 68999997321 012344 77889999999998643
No 248
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.84 E-value=3.8e-09 Score=100.26 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=71.5
Q ss_pred HHHHHhccCCCCC--CeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC--------C-CcEEEEE
Q psy17793 74 SILAGHYLDVQPG--QKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ--------L-SSIQTHV 142 (397)
Q Consensus 74 S~l~~~~L~~~~g--~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g--------~-~~v~~~~ 142 (397)
...+..++.+++| ++|||+|||.|..++.+|.. +++|+++|+++..++.+++++++.. + .++++++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 3445566777777 89999999999999999986 3579999999999888888877552 3 4699999
Q ss_pred cccccccccchhhHHHhhhcccCccEEEEcCCCC
Q psy17793 143 YDSTRINTSSQIDIERMKLQKESFDRILLDAPCS 176 (397)
Q Consensus 143 ~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCS 176 (397)
+|+..+... + ..+||+|++|||+-
T Consensus 152 ~D~~~~L~~---------~-~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 152 ASSLTALTD---------I-TPRPQVVYLDPMFP 175 (258)
T ss_dssp SCHHHHSTT---------C-SSCCSEEEECCCCC
T ss_pred CCHHHHHHh---------C-cccCCEEEEcCCCC
Confidence 999876422 2 24699999999963
No 249
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.84 E-value=3.6e-08 Score=95.80 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=85.5
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
++..+ .+|||+|||+|..+..++... +..+++++|+ +.+++.+++++.+.|+ ++|++..+|+...
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------- 229 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE----------- 229 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC-----------
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC-----------
Confidence 34455 899999999999999999875 4569999999 9999999999988876 4699999998652
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
++ +.||+|++.- ....|. ... ..++|++ +.+.|||||+|+......
T Consensus 230 -~~-~~~D~v~~~~----------vl~~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 230 -VP-SNGDIYLLSR----------IIGDLD----EAA-------SLRLLGN-----------CREAMAGDGRVVVIERTI 275 (334)
T ss_dssp -CC-SSCSEEEEES----------CGGGCC----HHH-------HHHHHHH-----------HHHHSCTTCEEEEEECCB
T ss_pred -CC-CCCCEEEEch----------hccCCC----HHH-------HHHHHHH-----------HHHhcCCCCEEEEEEecc
Confidence 22 5799999722 222233 222 1567888 899999999999886544
No 250
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.83 E-value=2.8e-08 Score=97.27 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=88.6
Q ss_pred cCCCC-CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHHH
Q psy17793 81 LDVQP-GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 81 L~~~~-g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
++..+ +.+|||+|||+|..+..++... +..+++++|+ +..++.+++++.+.++. +|++..+|+....
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------- 242 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR--------- 242 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---------
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc---------
Confidence 34455 7899999999999999999875 4579999999 88999999999999885 4999999987652
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
.+..+.||+|++. .....|. ... ..++|++ +.+.|||||+|+.....
T Consensus 243 -~~~~~~~D~v~~~----------~vlh~~~----~~~-------~~~~l~~-----------~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 243 -NFEGGAADVVMLN----------DCLHYFD----ARE-------AREVIGH-----------AAGLVKPGGALLILTMT 289 (352)
T ss_dssp -GGTTCCEEEEEEE----------SCGGGSC----HHH-------HHHHHHH-----------HHHTEEEEEEEEEEEEC
T ss_pred -ccCCCCccEEEEe----------cccccCC----HHH-------HHHHHHH-----------HHHHcCCCCEEEEEEec
Confidence 1134569999972 1222333 222 2667888 99999999999887654
Q ss_pred CC
Q psy17793 239 LS 240 (397)
Q Consensus 239 ~~ 240 (397)
+.
T Consensus 290 ~~ 291 (352)
T 3mcz_A 290 MN 291 (352)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 251
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.83 E-value=1.1e-08 Score=97.36 Aligned_cols=141 Identities=13% Similarity=0.065 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-----------------CC-----------
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL-----------------QL----------- 135 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~-----------------g~----------- 135 (397)
.++.+|||+|||+|..+. ++... ...+|+|+|+|+.+++.+++++++. |.
T Consensus 70 ~~~~~vLDiGcG~G~~~~-l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQL-LSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGG-TTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHH-Hhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 367899999999999443 33322 3469999999999999998866431 10
Q ss_pred --CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHH-HHHHHHHHHHHHh
Q psy17793 136 --SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKS-YANIQKKLLQAVY 212 (397)
Q Consensus 136 --~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~-l~~~Q~~lL~~~~ 212 (397)
..++++.+|+...... ....+..++||+|++.-- + ..+.. +.. ..++|++
T Consensus 148 ~~~~~~~~~~D~~~~~~~-----~~~~~~~~~fD~V~~~~~------------------l-~~~~~~~~~-~~~~l~~-- 200 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPL-----GAGSPAPLPADALVSAFC------------------L-EAVSPDLAS-FQRALDH-- 200 (289)
T ss_dssp HHHEEEEECCCTTSSSTT-----CSSCSSCSSEEEEEEESC------------------H-HHHCSSHHH-HHHHHHH--
T ss_pred HhhhceEEecccCCCCCc-----cccccCCCCCCEEEehhh------------------h-hhhcCCHHH-HHHHHHH--
Confidence 0145667787662100 000123467999997221 1 22000 112 2677888
Q ss_pred hhhccccccccccccCCcEEEEEecCC------------CccccHHHHHHHHHHCCCcEEEec
Q psy17793 213 RFVSLFDWQGIPLLKKDGILVYCTCSL------------SVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 213 ~f~~~~~~~a~~lLkpgG~lvysTCS~------------~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
+.++|||||+|+++...- ..--+++.+..+|++. +|+.+.+
T Consensus 201 ---------~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~~~~ 253 (289)
T 2g72_A 201 ---------ITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRS-GYKVRDL 253 (289)
T ss_dssp ---------HHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEE
T ss_pred ---------HHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHc-CCeEEEe
Confidence 999999999999874210 0011345566667666 4666543
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.83 E-value=5.8e-11 Score=111.20 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=75.7
Q ss_pred EEEechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccc
Q psy17793 67 GILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDST 146 (397)
Q Consensus 67 ~~~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~ 146 (397)
|+.+......+...+++.++++|||+|||+|..+..++.. .++|+|+|+|+.+++.++++++ +..+++++.+|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 4455555666677788889999999999999999999986 2799999999999999988776 3467999999998
Q ss_pred cccccchhhHHHhhhc-ccCccEEEEcCCCCC
Q psy17793 147 RINTSSQIDIERMKLQ-KESFDRILLDAPCSG 177 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~~-~~~fD~Il~DpPCSg 177 (397)
++. +. .++| .|++|||+..
T Consensus 86 ~~~-----------~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 86 QFQ-----------FPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp TTT-----------CCCSSEE-EEEEECCSSS
T ss_pred hcC-----------cccCCCc-EEEEeCCccc
Confidence 763 22 2568 8999999654
No 253
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.81 E-value=4e-09 Score=95.72 Aligned_cols=101 Identities=13% Similarity=0.187 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++.. +.+++++|+|+.+++.++++. ..+...|+..... ++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~---------~~~~ 91 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDM---------PYEE 91 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCC---------CSCT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCC---------CCCC
Confidence 67889999999999999988885 379999999999999887653 2577788765321 1345
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
++||+|++.-. ..... .. .++|++ +.++|||||.++.++-
T Consensus 92 ~~fD~v~~~~~----------l~~~~------------~~-~~~l~~-----------~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 92 EQFDCVIFGDV----------LEHLF------------DP-WAVIEK-----------VKPYIKQNGVILASIP 131 (230)
T ss_dssp TCEEEEEEESC----------GGGSS------------CH-HHHHHH-----------TGGGEEEEEEEEEEEE
T ss_pred CccCEEEECCh----------hhhcC------------CH-HHHHHH-----------HHHHcCCCCEEEEEeC
Confidence 78999997322 11111 11 467788 9999999999999864
No 254
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.79 E-value=7.5e-09 Score=98.31 Aligned_cols=100 Identities=10% Similarity=0.025 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEEcccccccccchhhHHHh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKL----QLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~----g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
..+.+|||+|||+|+.+..++.. + .+|+++|+|+.+++.+++++..+ .-++++++.+|+..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~----------- 136 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD----------- 136 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC-----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH-----------
Confidence 34579999999999999888875 4 79999999999999998876432 234699999998765
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
. ++||+|++|.+ . +.. +++. +.+.|||||+++..+.+.
T Consensus 137 --~-~~fD~Ii~d~~--------------d----p~~----------~~~~-----------~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 137 --I-KKYDLIFCLQE--------------P----DIH----------RIDG-----------LKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp --C-CCEEEEEESSC--------------C----CHH----------HHHH-----------HHTTEEEEEEEEEEEECT
T ss_pred --H-hhCCEEEECCC--------------C----hHH----------HHHH-----------HHHhcCCCcEEEEEcCCc
Confidence 2 57999999864 0 111 4556 889999999999986553
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.77 E-value=1.5e-08 Score=95.92 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=73.0
Q ss_pred EEech-hHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccc
Q psy17793 68 ILQNL-PSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDST 146 (397)
Q Consensus 68 ~~Qd~-~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~ 146 (397)
++.|+ ....++..+++.++++|||+|||+|..|..++.. .++|+|+|+|+.+++.++++++. ..+++++.+|+.
T Consensus 11 FL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~ 85 (255)
T 3tqs_A 11 FLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDAL 85 (255)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTT
T ss_pred cccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchH
Confidence 34443 3345666778899999999999999999998875 37999999999999999999875 468999999998
Q ss_pred cccccchhhHHHhhh-cccCccEEEEcCC
Q psy17793 147 RINTSSQIDIERMKL-QKESFDRILLDAP 174 (397)
Q Consensus 147 ~~~~~~~~d~~~~~~-~~~~fD~Il~DpP 174 (397)
++... .+ ..+.|| |+.|+|
T Consensus 86 ~~~~~--------~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 86 QFDFS--------SVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TCCGG--------GSCCSSCEE-EEEECC
T ss_pred hCCHH--------HhccCCCeE-EEecCC
Confidence 87311 01 134688 899999
No 256
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.70 E-value=3.4e-08 Score=99.00 Aligned_cols=108 Identities=14% Similarity=0.122 Sum_probs=74.2
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
..+.+.++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++ ++..+. ..+.. .+...
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~---~~~~~------~~~~~ 164 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRT---DFFEK------ATADD 164 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEEC---SCCSH------HHHHH
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcce---eeech------hhHhh
Confidence 3455678899999999999999999884 45999999999999988765 543321 11100 11222
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
.++..++||+|++.-- . ..+ .+ ...+|++ +.++|||||++++++
T Consensus 165 l~~~~~~fD~I~~~~v----------l---------~h~---~d-~~~~l~~-----------~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 165 VRRTEGPANVIYAANT----------L---------CHI---PY-VQSVLEG-----------VDALLAPDGVFVFED 208 (416)
T ss_dssp HHHHHCCEEEEEEESC----------G---------GGC---TT-HHHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred cccCCCCEEEEEECCh----------H---------Hhc---CC-HHHHHHH-----------HHHHcCCCeEEEEEe
Confidence 3355678999997221 1 111 11 1567777 899999999999975
No 257
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.68 E-value=5.3e-08 Score=92.84 Aligned_cols=119 Identities=13% Similarity=0.004 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCC---ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHH-Hhh
Q psy17793 85 PGQKVLDMCAAP---GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIE-RMK 160 (397)
Q Consensus 85 ~g~~VLDlcagp---G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~-~~~ 160 (397)
+..+|||+|||+ |..+..++.. .+..+|+++|+|+.+++.+++++.. ..+++++.+|+...... ..... ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~-~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYI-LNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHH-HHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhh-hccchhhcc
Confidence 447999999999 9876555444 4568999999999999999998843 35799999999764100 00000 001
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
+...+||.|++.-- ...+. ... ...+|++ +.+.|||||+|++++...
T Consensus 153 ~d~~~~d~v~~~~v----------lh~~~----d~~-------~~~~l~~-----------~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLVGM----------LHYLS----PDV-------VDRVVGA-----------YRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEETTT----------GGGSC----TTT-------HHHHHHH-----------HHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEech----------hhhCC----cHH-------HHHHHHH-----------HHHhCCCCcEEEEEEecC
Confidence 22247999997211 11111 011 1567888 999999999999987653
No 258
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.67 E-value=5.7e-08 Score=92.91 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCCCh----HHHHHHHHcCC---CcEEEEEeCCHHHHHHHHHHHH--------------Hh---------C
Q psy17793 85 PGQKVLDMCAAPGN----KLTHIALLMND---TGTLIALDKSKPRVTKLEETIK--------------KL---------Q 134 (397)
Q Consensus 85 ~g~~VLDlcagpG~----kt~~lA~~~~~---~~~V~avD~s~~rl~~l~~n~~--------------~~---------g 134 (397)
++.+|||+|||+|. .+..+++.++. +.+|+|+|+|+.+++.+++++. ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 55556665442 3589999999999999998751 11 1
Q ss_pred ---C-----CcEEEEEcccccccccchhhHHHhhhc-ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHH
Q psy17793 135 ---L-----SSIQTHVYDSTRINTSSQIDIERMKLQ-KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQK 205 (397)
Q Consensus 135 ---~-----~~v~~~~~D~~~~~~~~~~d~~~~~~~-~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~ 205 (397)
+ .+|.+...|..... +. .++||+|+|- ....... .+.|+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-----------~~~~~~fDlI~cr----------nvliyf~-----------~~~~~ 232 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-----------YNVPGPFDAIFCR----------NVMIYFD-----------KTTQE 232 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-----------CCCCCCEEEEEEC----------SSGGGSC-----------HHHHH
T ss_pred ceeechhhcccCeEEecccCCCC-----------CCcCCCeeEEEEC----------CchHhCC-----------HHHHH
Confidence 1 25888888887631 22 3679999980 1111111 12358
Q ss_pred HHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 206 KLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 206 ~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+++.+ ..+.|||||.|+..
T Consensus 233 ~vl~~-----------~~~~L~pgG~L~lg 251 (274)
T 1af7_A 233 DILRR-----------FVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHH-----------HGGGEEEEEEEEEC
T ss_pred HHHHH-----------HHHHhCCCcEEEEE
Confidence 88998 99999999999874
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.67 E-value=4.3e-08 Score=93.63 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=73.7
Q ss_pred CcEEEech-hHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc
Q psy17793 65 SMGILQNL-PSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY 143 (397)
Q Consensus 65 g~~~~Qd~-~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~ 143 (397)
|..++.|+ ...-++..+++.++ +|||+|||+|..|..++.. .++|+|+|+|+.+++.+++++.. .+++++++
T Consensus 26 GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~ 98 (271)
T 3fut_A 26 GQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQ 98 (271)
T ss_dssp SCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT---SSEEEEES
T ss_pred CccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC---CCEEEEEC
Confidence 33344443 34455667788889 9999999999999999985 36899999999999999998762 57999999
Q ss_pred ccccccccchhhHHHhhhcc-cCccEEEEcCCCC
Q psy17793 144 DSTRINTSSQIDIERMKLQK-ESFDRILLDAPCS 176 (397)
Q Consensus 144 D~~~~~~~~~~d~~~~~~~~-~~fD~Il~DpPCS 176 (397)
|+.++. +.. ..+|.|+.|+|+.
T Consensus 99 D~l~~~-----------~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 99 DALLYP-----------WEEVPQGSLLVANLPYH 121 (271)
T ss_dssp CGGGSC-----------GGGSCTTEEEEEEECSS
T ss_pred ChhhCC-----------hhhccCccEEEecCccc
Confidence 998763 111 2689999999954
No 260
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.67 E-value=4.1e-08 Score=98.40 Aligned_cols=105 Identities=16% Similarity=0.152 Sum_probs=74.6
Q ss_pred CCCeEEEEcCC------CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHH
Q psy17793 85 PGQKVLDMCAA------PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIER 158 (397)
Q Consensus 85 ~g~~VLDlcag------pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~ 158 (397)
++.+|||+||| +|+.++.++....+.++|+++|+|+.+. ....+|+++++|+.++... ..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~-----~~ 281 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFL-----DR 281 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHH-----HH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchh-----hh
Confidence 46799999999 7888888887654678999999999872 2346799999999875200 00
Q ss_pred hhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 159 MKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
.....++||+|++|.- . . .. -+.+.|++ +.++|||||+++++...
T Consensus 282 l~~~d~sFDlVisdgs------------H-~----~~-------d~~~aL~e-----------l~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 282 IARRYGPFDIVIDDGS------------H-I----NA-------HVRTSFAA-----------LFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHCCEEEEEECSC------------C-C----HH-------HHHHHHHH-----------HGGGEEEEEEEEEECGG
T ss_pred hhcccCCccEEEECCc------------c-c----ch-------hHHHHHHH-----------HHHhcCCCeEEEEEecc
Confidence 0001478999998642 0 0 11 12566777 99999999999998543
No 261
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.66 E-value=2.1e-08 Score=95.86 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=52.6
Q ss_pred CCeEEEEcCCC--ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 86 GQKVLDMCAAP--GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 86 g~~VLDlcagp--G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
..+|||+|||+ ++.+..++....+..+|+++|.|+.+++.+++++...+..+++++.+|++..
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 36899999997 5667777776667889999999999999999988755445799999999875
No 262
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.66 E-value=5.5e-08 Score=88.03 Aligned_cols=118 Identities=17% Similarity=0.205 Sum_probs=81.5
Q ss_pred HHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhh
Q psy17793 76 LAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 76 l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d 155 (397)
+...+....++.+|||+|||+|..+..++ .+|+++|+|+. ++.+..+|+..+.
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~------ 110 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVP------ 110 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCS------
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCC------
Confidence 44444445677899999999999887552 58999999987 4567788887642
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
+..++||+|++...- ++. +. ..+|++ +.++|||||.++++
T Consensus 111 -----~~~~~fD~v~~~~~l-----------~~~--~~-----------~~~l~~-----------~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 111 -----LEDESVDVAVFCLSL-----------MGT--NI-----------RDFLEE-----------ANRVLKPGGLLKVA 150 (215)
T ss_dssp -----CCTTCEEEEEEESCC-----------CSS--CH-----------HHHHHH-----------HHHHEEEEEEEEEE
T ss_pred -----CCCCCEeEEEEehhc-----------ccc--CH-----------HHHHHH-----------HHHhCCCCeEEEEE
Confidence 345689999984320 011 11 456777 88999999999998
Q ss_pred ecCCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 236 TCSLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 236 TCS~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
+.... ..+.+.+..++++. +++.+.
T Consensus 151 ~~~~~-~~~~~~~~~~l~~~-Gf~~~~ 175 (215)
T 2zfu_A 151 EVSSR-FEDVRTFLRAVTKL-GFKIVS 175 (215)
T ss_dssp ECGGG-CSCHHHHHHHHHHT-TEEEEE
T ss_pred EcCCC-CCCHHHHHHHHHHC-CCEEEE
Confidence 65432 23556677777776 566554
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.66 E-value=5.6e-08 Score=91.01 Aligned_cols=90 Identities=9% Similarity=0.125 Sum_probs=71.6
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
.+......+...+++.++++|||+|||+|..|..++.. .++|+|+|+|+.+++.++++++. ..+++++.+|+.++
T Consensus 14 ~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQF 88 (244)
T ss_dssp CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGC
T ss_pred CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhC
Confidence 34444455666777888999999999999999999986 27899999999999999998864 35799999999876
Q ss_pred cccchhhHHHhhhc-ccCccEEEEcCCC
Q psy17793 149 NTSSQIDIERMKLQ-KESFDRILLDAPC 175 (397)
Q Consensus 149 ~~~~~~d~~~~~~~-~~~fD~Il~DpPC 175 (397)
. +. ...| .|+.|+|+
T Consensus 89 ~-----------~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 89 K-----------FPKNQSY-KIFGNIPY 104 (244)
T ss_dssp C-----------CCSSCCC-EEEEECCG
T ss_pred C-----------cccCCCe-EEEEeCCc
Confidence 3 22 1345 68999994
No 264
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.63 E-value=8.8e-08 Score=89.77 Aligned_cols=71 Identities=11% Similarity=0.032 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.+..+|||+|||.|-.+..++ +..+++|+|+|+.+++.+++++..+| .+..+...|..... ..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~------------~~ 166 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAP------------PA 166 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSC------------CC
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCC------------CC
Confidence 456799999999999986554 57899999999999999999999998 46788888987652 34
Q ss_pred cCccEEEE
Q psy17793 164 ESFDRILL 171 (397)
Q Consensus 164 ~~fD~Il~ 171 (397)
+.||+||+
T Consensus 167 ~~~DvvLl 174 (253)
T 3frh_A 167 EAGDLALI 174 (253)
T ss_dssp CBCSEEEE
T ss_pred CCcchHHH
Confidence 68999987
No 265
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.63 E-value=3.5e-08 Score=95.15 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-EcccccccccchhhHHHhhhcc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTH-VYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~-~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
+|.+|||+|||||++|..+++. +.++|+|+|+++.+++.+.++ . .++... ..|+..+... .++.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~--------~l~~ 149 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPV--------DFTE 149 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGG--------GCTT
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchh--------hCCC
Confidence 5789999999999999988885 457999999999998874332 1 233222 2344333110 1222
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
..||.|++|... .++ ..+|.+ +.++|||||+++..
T Consensus 150 ~~fD~v~~d~sf---------------~sl-----------~~vL~e-----------~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 150 GLPSFASIDVSF---------------ISL-----------NLILPA-----------LAKILVDGGQVVAL 184 (291)
T ss_dssp CCCSEEEECCSS---------------SCG-----------GGTHHH-----------HHHHSCTTCEEEEE
T ss_pred CCCCEEEEEeeH---------------hhH-----------HHHHHH-----------HHHHcCcCCEEEEE
Confidence 359999998752 122 445666 88999999999987
No 266
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.62 E-value=3.3e-08 Score=93.58 Aligned_cols=104 Identities=19% Similarity=0.130 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.+..+|||+|||.|-.++.++.. .+..+++|+|+|+.+++.+++|+..+|+. .++...|...-. ..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~------------p~ 196 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR------------LD 196 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC------------CC
T ss_pred CCCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC------------CC
Confidence 33569999999999999877664 36789999999999999999999999986 788888876542 45
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
+.||+||+ .+.+..+...|+..+-+ .++.|+++|.+|-
T Consensus 197 ~~~DvaL~----------------------lkti~~Le~q~kg~g~~-----------ll~aL~~~~vvVS 234 (281)
T 3lcv_B 197 EPADVTLL----------------------LKTLPCLETQQRGSGWE-----------VIDIVNSPNIVVT 234 (281)
T ss_dssp SCCSEEEE----------------------TTCHHHHHHHSTTHHHH-----------HHHHSSCSEEEEE
T ss_pred CCcchHHH----------------------HHHHHHhhhhhhHHHHH-----------HHHHhCCCCEEEe
Confidence 78999997 24444444444433336 7778899987753
No 267
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.61 E-value=2.1e-07 Score=91.24 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=78.5
Q ss_pred hccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhHH
Q psy17793 79 HYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDIE 157 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~~ 157 (397)
..++..++.+|||+|||+|..+..++... +..+++++|+ +..+. ++++++.+.. +|++..+|+...
T Consensus 178 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~--------- 244 (348)
T 3lst_A 178 RAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE--------- 244 (348)
T ss_dssp HHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---------
T ss_pred HhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---------
Confidence 34456778899999999999999999875 4678999999 44444 4444444443 599999998632
Q ss_pred HhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEec
Q psy17793 158 RMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTC 237 (397)
.+ .||+|++- .....|. .... .++|++ +.+.|||||+|+....
T Consensus 245 ---~p--~~D~v~~~----------~vlh~~~----d~~~-------~~~L~~-----------~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 245 ---VP--HADVHVLK----------RILHNWG----DEDS-------VRILTN-----------CRRVMPAHGRVLVIDA 287 (348)
T ss_dssp ---CC--CCSEEEEE----------SCGGGSC----HHHH-------HHHHHH-----------HHHTCCTTCEEEEEEC
T ss_pred ---CC--CCcEEEEe----------hhccCCC----HHHH-------HHHHHH-----------HHHhcCCCCEEEEEEe
Confidence 23 79999972 1222333 2211 567888 9999999999998765
Q ss_pred CC
Q psy17793 238 SL 239 (397)
Q Consensus 238 S~ 239 (397)
..
T Consensus 288 ~~ 289 (348)
T 3lst_A 288 VV 289 (348)
T ss_dssp CB
T ss_pred cc
Confidence 43
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.60 E-value=1.2e-07 Score=90.88 Aligned_cols=89 Identities=12% Similarity=0.172 Sum_probs=68.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc
Q psy17793 74 SILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMND-TGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS 152 (397)
Q Consensus 74 S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~-~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~ 152 (397)
...++..+++.++++|||+|||+|..|..++..... .++|+|+|+|+.+++.++++. ..+++++++|+.++.-.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~- 105 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFG- 105 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGG-
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChh-
Confidence 344566778889999999999999999999987533 356999999999999999983 35799999999887411
Q ss_pred hhhHHHhhhcc-c--CccEEEEcCC
Q psy17793 153 QIDIERMKLQK-E--SFDRILLDAP 174 (397)
Q Consensus 153 ~~d~~~~~~~~-~--~fD~Il~DpP 174 (397)
.+.. . ..+.|+.|+|
T Consensus 106 -------~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 106 -------SIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp -------GGSCSSSSCCEEEEEECC
T ss_pred -------HhcccccCCceEEEEccC
Confidence 0111 1 3458999999
No 269
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.59 E-value=1.4e-07 Score=86.17 Aligned_cols=60 Identities=8% Similarity=0.098 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEEccccc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL---SSIQTHVYDSTR 147 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~---~~v~~~~~D~~~ 147 (397)
.+.++||++|+ |.-|+.+|.+ . +++|+++|.+++..+.+++++++.|+ ++|+++.+|+..
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 35679999997 6777777763 2 68999999999999999999999995 569999999754
No 270
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.52 E-value=6.4e-07 Score=88.27 Aligned_cols=114 Identities=15% Similarity=0.053 Sum_probs=86.1
Q ss_pred ccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHh
Q psy17793 80 YLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERM 159 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~ 159 (397)
.++..+..+|+|+|||+|..+..+++.. +..+++..|. +..++.+++++...+.++|++..+|+....
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~---------- 241 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP---------- 241 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC----------
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC----------
Confidence 3445667899999999999999999985 5678888897 889999998887767778999999987531
Q ss_pred hhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCC
Q psy17793 160 KLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL 239 (397)
Q Consensus 160 ~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~ 239 (397)
...+|+|++ ..+...|+ .+.. .++|++ +.+.|+|||+|+....-+
T Consensus 242 ---~~~~D~~~~----------~~vlh~~~----d~~~-------~~iL~~-----------~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 242 ---LPEADLYIL----------ARVLHDWA----DGKC-------SHLLER-----------IYHTCKPGGGILVIESLL 286 (353)
T ss_dssp ---CCCCSEEEE----------ESSGGGSC----HHHH-------HHHHHH-----------HHHHCCTTCEEEEEECCC
T ss_pred ---CCCceEEEe----------eeecccCC----HHHH-------HHHHHH-----------HHhhCCCCCEEEEEEeee
Confidence 235799987 23344455 3332 567888 999999999998876544
Q ss_pred C
Q psy17793 240 S 240 (397)
Q Consensus 240 ~ 240 (397)
.
T Consensus 287 ~ 287 (353)
T 4a6d_A 287 D 287 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 271
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.50 E-value=4.6e-08 Score=91.87 Aligned_cols=127 Identities=16% Similarity=0.070 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHH--cCC-CcEEEEEe--CCHHHHHHHHHHHHHhCCCcEEEEEc-ccccccccchhhH
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALL--MND-TGTLIALD--KSKPRVTKLEETIKKLQLSSIQTHVY-DSTRINTSSQIDI 156 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~--~~~-~~~V~avD--~s~~rl~~l~~n~~~~g~~~v~~~~~-D~~~~~~~~~~d~ 156 (397)
++||.+|||+|||||+++..++.+ ++. .|.|+|+| +.|-.. ...|+.-+.+..+ |++.+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~-------- 135 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYK-------- 135 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGS--------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCC--------
Confidence 578999999999999999988887 422 46778877 222110 0023333556556 88764
Q ss_pred HHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCc-EEEEE
Q psy17793 157 ERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDG-ILVYC 235 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG-~lvys 235 (397)
....+|+||+|.-=+ +|. ..+++. +.+. ||.| |.++|+||| .++.-
T Consensus 136 -----~~~~~DvVLSDMAPn-SG~--------------~~vD~~-----Rs~~-aL~~-------A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 136 -----PSEISDTLLCDIGES-SPS--------------AEIEEQ-----RTLR-ILEM-------VSDWLSRGPKEFCIK 182 (269)
T ss_dssp -----CCCCCSEEEECCCCC-CSC--------------HHHHHH-----HHHH-HHHH-------HHHHHTTCCSEEEEE
T ss_pred -----CCCCCCEEEeCCCCC-CCc--------------cHHHHH-----HHHH-HHHH-------HHHHhhcCCcEEEEE
Confidence 235799999997423 332 222221 1111 4444 888999999 77765
Q ss_pred ecCCCc--cccHHHHHHHHHHCCCcE
Q psy17793 236 TCSLSV--EENEAVIAWILHRHPEVE 259 (397)
Q Consensus 236 TCS~~~--eEnE~vV~~~L~~~~~~~ 259 (397)
.+.+ ++-.+.++.+-+.+....
T Consensus 183 --VFqg~~~~~~~~l~~lk~~F~~vk 206 (269)
T 2px2_A 183 --ILCPYMPKVIEKLESLQRRFGGGL 206 (269)
T ss_dssp --ESCTTSHHHHHHHHHHHHHHCCEE
T ss_pred --ECCCCchHHHHHHHHHHHHcCCEE
Confidence 3443 222223445555554433
No 272
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.48 E-value=3.8e-08 Score=91.66 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=37.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHH
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEET 129 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n 129 (397)
.+|.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHT
T ss_pred CCCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHh
Confidence 35779999999999999999885 345999999999999986654
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.47 E-value=2.2e-07 Score=87.42 Aligned_cols=91 Identities=12% Similarity=0.183 Sum_probs=69.5
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
........+...+++.++++|||+|||+|..|..++.. +..+|+|+|+|+.+++.++++ +..+++++++|+.++
T Consensus 15 ~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 15 VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKF 88 (249)
T ss_dssp ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhC
Confidence 33333444556778888999999999999999988874 357999999999999999887 345799999999876
Q ss_pred cccchhhHHHhhhcccCccEEEEcCCC
Q psy17793 149 NTSSQIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
... ... ..| .|+.|+|+
T Consensus 89 ~~~--------~~~-~~~-~vv~NlPy 105 (249)
T 3ftd_A 89 PFC--------SLG-KEL-KVVGNLPY 105 (249)
T ss_dssp CGG--------GSC-SSE-EEEEECCT
T ss_pred Chh--------Hcc-CCc-EEEEECch
Confidence 311 011 234 89999995
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.46 E-value=1.7e-07 Score=88.38 Aligned_cols=91 Identities=10% Similarity=0.053 Sum_probs=67.3
Q ss_pred HHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccch
Q psy17793 74 SILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQ 153 (397)
Q Consensus 74 S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~ 153 (397)
...++..+++.++++|||+|||+|..|. ++. ....+|+|+|+|+.+++.++++++.. .+++++++|+..+...
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~-- 82 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFG-- 82 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHH--
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHH--
Confidence 3445566788899999999999999999 654 22233999999999999999887653 4799999999876311
Q ss_pred hhHHHhhhc-ccCccEEEEcCCCC
Q psy17793 154 IDIERMKLQ-KESFDRILLDAPCS 176 (397)
Q Consensus 154 ~d~~~~~~~-~~~fD~Il~DpPCS 176 (397)
+. +. .+..|.|+.|+|+.
T Consensus 83 -~~----~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 83 -EL----AEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp -HH----HHHHTSCEEEEEECCTT
T ss_pred -Hh----hcccCCceEEEECCCCC
Confidence 00 10 12468999999953
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.40 E-value=1.2e-06 Score=82.98 Aligned_cols=134 Identities=14% Similarity=0.147 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHc------CC-----CcEEEEEeCCH---HHHH-----------HHHHHHHHh----
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLM------ND-----TGTLIALDKSK---PRVT-----------KLEETIKKL---- 133 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~------~~-----~~~V~avD~s~---~rl~-----------~l~~n~~~~---- 133 (397)
.+++.+|||+|+|+|.-++.+++.. .+ ..+++++|..+ +.++ .++++++.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999998877653 33 25899999987 4444 455555541
Q ss_pred ----------CCCcEEEEEcccccccccchhhHHHhhhcccCccEEEEcC--CCCCCCCCcccccccCccchHHHHHHHH
Q psy17793 134 ----------QLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDA--PCSGFGQRPMFYNANSFLNLDKKIKSYA 201 (397)
Q Consensus 134 ----------g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~Dp--PCSg~G~~p~~~~~~s~~~~~~~~~~l~ 201 (397)
+..+++++.+|+....... .......||+|++|+ |+. +| .-|+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~------~~~~~~~~D~iflD~fsp~~----~p---~lw~------------ 192 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQL------DDSLNQKVDAWFLDGFAPAK----NP---DMWT------------ 192 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGS------CGGGTTCEEEEEECSSCTTT----CG---GGCC------------
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhc------ccccCCeEEEEEECCCCccc----Ch---hhcC------------
Confidence 2235788999998753210 000113799999998 421 22 1234
Q ss_pred HHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEec
Q psy17793 202 NIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQT 263 (397)
Q Consensus 202 ~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~ 263 (397)
.++|+. +.++|||||+|+.-|+. ..|...|... +|++...
T Consensus 193 ---~~~l~~-----------l~~~L~pGG~l~tysaa-------~~vrr~L~~a-GF~v~~~ 232 (257)
T 2qy6_A 193 ---QNLFNA-----------MARLARPGGTLATFTSA-------GFVRRGLQEA-GFTMQKR 232 (257)
T ss_dssp ---HHHHHH-----------HHHHEEEEEEEEESCCB-------HHHHHHHHHH-TEEEEEE
T ss_pred ---HHHHHH-----------HHHHcCCCcEEEEEeCC-------HHHHHHHHHC-CCEEEeC
Confidence 455666 88899999999842221 3677777775 6776654
No 276
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.36 E-value=1.4e-06 Score=86.21 Aligned_cols=104 Identities=17% Similarity=0.160 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++... +..+++++|+ +..++.++++ .+|++..+|+... ++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~------------~p 260 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFDG------------VP 260 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTC------------CC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCCC------------CC
Confidence 4567899999999999999999876 4678999999 8887766532 5799999998752 23
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
. . |+|++- .....|. .... .++|++ +.+.|||||+|+.....+.
T Consensus 261 ~-~-D~v~~~----------~vlh~~~----~~~~-------~~~l~~-----------~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 261 K-G-DAIFIK----------WICHDWS----DEHC-------LKLLKN-----------CYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp C-C-SEEEEE----------SCGGGBC----HHHH-------HHHHHH-----------HHHHSCTTCEEEEEECCCC
T ss_pred C-C-CEEEEe----------chhhcCC----HHHH-------HHHHHH-----------HHHHcCCCCEEEEEEeccC
Confidence 2 2 999871 2233343 2222 567888 9999999999998866543
No 277
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.35 E-value=3.4e-07 Score=86.97 Aligned_cols=133 Identities=13% Similarity=0.056 Sum_probs=76.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
..+++.+|||+|||||+++..++... +...|+|+|+.......... .+..|. ++.....|+... .+
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~-----------~l 136 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIH-----------RL 136 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTT-----------TS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceeh-----------hc
Confidence 35788899999999999998777653 34578888887432000000 011121 344444443211 13
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC-cEEEEEecCCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD-GILVYCTCSLS 240 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg-G~lvysTCS~~ 240 (397)
..+.||+|++|--=+ +|. ..++... +..+|+. |.++|||| |.+|...-.-.
T Consensus 137 ~~~~~DlVlsD~apn-sG~--------------~~~D~~r--s~~LL~~-----------a~~~LkpG~G~FV~KVf~py 188 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSS--------------SVTEGER--TVRVLDT-----------VEKWLACGVDNFCVKVLAPY 188 (277)
T ss_dssp CCCCCSEEEECCCCC-CSC--------------HHHHHHH--HHHHHHH-----------HHHHHTTCCSEEEEEESCTT
T ss_pred CCCCccEEEecCccC-cCc--------------hHHHHHH--HHHHHHH-----------HHHHhCCCCCeEEEEecCCC
Confidence 457899999997422 331 2222221 1334666 99999999 99999733222
Q ss_pred ccccHHHHHHHHHHCC
Q psy17793 241 VEENEAVIAWILHRHP 256 (397)
Q Consensus 241 ~eEnE~vV~~~L~~~~ 256 (397)
.++..+.+..+-+.+.
T Consensus 189 g~~~~~l~~~lk~~F~ 204 (277)
T 3evf_A 189 MPDVLEKLELLQRRFG 204 (277)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHhcC
Confidence 3444445555555553
No 278
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.34 E-value=9.2e-07 Score=92.70 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
.+-+|||+|||.|..+..||.+ +..|+|+|.++..++.++..+++.|..+|++.++|+.++.. .+..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~---------~~~~~ 133 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA---------ALEEG 133 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH---------HCCTT
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh---------hccCC
Confidence 4569999999999999999985 57999999999999999999998887789999999877631 23457
Q ss_pred CccEEEE
Q psy17793 165 SFDRILL 171 (397)
Q Consensus 165 ~fD~Il~ 171 (397)
+||+|++
T Consensus 134 ~fD~v~~ 140 (569)
T 4azs_A 134 EFDLAIG 140 (569)
T ss_dssp SCSEEEE
T ss_pred CccEEEE
Confidence 8999997
No 279
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.32 E-value=4.9e-07 Score=86.65 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc-ccccccccchhhHHHhhh
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY-DSTRINTSSQIDIERMKL 161 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~-D~~~~~~~~~~d~~~~~~ 161 (397)
.++|.+|||+|||||+++..+++.+ +...|+|+|+.......... .+..+.+-+.+... |... +
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~-------------l 143 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFT-------------M 143 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTT-------------S
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccCCceEEeecCceeee-------------c
Confidence 3578999999999999999888754 34578999996531000000 00111111222211 2221 2
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC-cEEEEEecCCC
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD-GILVYCTCSLS 240 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg-G~lvysTCS~~ 240 (397)
..+.+|+|++|.-.+ +|. ..+..+ .|..||.- |.++|+|| |.+|.-.-...
T Consensus 144 ~~~~~DlVlsD~APn-sG~--------------~~~D~~--rs~~LL~~-----------A~~~LkpG~G~FV~KvF~~y 195 (300)
T 3eld_A 144 PTEPSDTLLCDIGES-SSN--------------PLVERD--RTMKVLEN-----------FERWKHVNTENFCVKVLAPY 195 (300)
T ss_dssp CCCCCSEEEECCCCC-CSS--------------HHHHHH--HHHHHHHH-----------HHHHCCTTCCEEEEEESSTT
T ss_pred CCCCcCEEeecCcCC-CCC--------------HHHHHH--HHHHHHHH-----------HHHHhcCCCCcEEEEecccc
Confidence 456899999998766 552 222222 22344665 89999999 99998733222
Q ss_pred ccccHHHHHHHHHHCCC
Q psy17793 241 VEENEAVIAWILHRHPE 257 (397)
Q Consensus 241 ~eEnE~vV~~~L~~~~~ 257 (397)
.++..+.+..+-+.+..
T Consensus 196 G~~~~~ll~~lk~~F~~ 212 (300)
T 3eld_A 196 HPDVIEKLERLQLRFGG 212 (300)
T ss_dssp SHHHHHHHHHHHHHHCC
T ss_pred CccHHHHHHHHHHhCCc
Confidence 45555555555555543
No 280
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.30 E-value=2.2e-06 Score=84.69 Aligned_cols=104 Identities=18% Similarity=0.211 Sum_probs=76.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ ..+|++..+|+... ++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~~------------~p 258 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFKE------------VP 258 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTTC------------CC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCCC------------CC
Confidence 5567899999999999999999876 4578999999 877766553 25799999998752 23
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~ 240 (397)
.+ |+|++ ..+...|. .... .++|++ +.+.|||||+|+.....+.
T Consensus 259 ~~--D~v~~----------~~vlh~~~----d~~~-------~~~L~~-----------~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 259 SG--DTILM----------KWILHDWS----DQHC-------ATLLKN-----------CYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp CC--SEEEE----------ESCGGGSC----HHHH-------HHHHHH-----------HHHHSCTTCEEEEEECCBC
T ss_pred CC--CEEEe----------hHHhccCC----HHHH-------HHHHHH-----------HHHHcCCCCEEEEEEeccC
Confidence 22 99987 12233344 2222 567888 9999999999998765543
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.29 E-value=3e-07 Score=87.55 Aligned_cols=130 Identities=14% Similarity=0.075 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
++++.+|||+|||||+++..++..+ +...|+++|+.......... .+..|. ++.....+.... .+.
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~-----------~l~ 153 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVF-----------NME 153 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGG-----------GSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchh-----------hcC
Confidence 5788899999999999998777654 45678999997642111100 001122 222222221111 134
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC--cEEEEEecCCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD--GILVYCTCSLS 240 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg--G~lvysTCS~~ 240 (397)
...+|+||+|--=+ +|. ..++... +..+|+- |.++|||| |.+|.-. +.
T Consensus 154 ~~~~DvVLSDmApn-sG~--------------~~~D~~r--s~~LL~~-----------A~~~Lk~g~~G~Fv~Kv--F~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPS--------------IAVEEQR--TLRVLNC-----------AKQWLQEGNYTEFCIKV--LC 203 (282)
T ss_dssp CCCCSEEEECCCCC-CSC--------------HHHHHHH--HHHHHHH-----------HHHHHHHHCCCEEEEEE--SC
T ss_pred CCCcCEEEecCccC-CCC--------------hHHHHHH--HHHHHHH-----------HHHHcCCCCCCcEEEEE--ec
Confidence 57899999996422 332 2222221 2334555 88999999 9999873 34
Q ss_pred --ccccHHHHHHHHHHCC
Q psy17793 241 --VEENEAVIAWILHRHP 256 (397)
Q Consensus 241 --~eEnE~vV~~~L~~~~ 256 (397)
.++..+.+..+-+.+.
T Consensus 204 pyg~~~~~l~~~lk~~F~ 221 (282)
T 3gcz_A 204 PYTPLIMEELSRLQLKHG 221 (282)
T ss_dssp CCSHHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHHHHhcC
Confidence 3444445555544543
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.28 E-value=2.2e-06 Score=82.15 Aligned_cols=125 Identities=7% Similarity=0.037 Sum_probs=91.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHHHhCC
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMN----DTGTLIALDKSK--------------------------PRVTKLEETIKKLQL 135 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~----~~~~V~avD~s~--------------------------~rl~~l~~n~~~~g~ 135 (397)
...||++|++.|.-++.+|..+. ..++|+++|... .+++.+++|+++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 44899999999999999988763 367899999642 157789999999998
Q ss_pred --CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhh
Q psy17793 136 --SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYR 213 (397)
Q Consensus 136 --~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~ 213 (397)
++|+++.+|+.+.... ...++||.|.+|+- ..... ...|+.
T Consensus 187 ~~~~I~li~Gda~etL~~---------~~~~~~d~vfIDaD------------------~y~~~-------~~~Le~--- 229 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPT---------APIDTLAVLRMDGD------------------LYEST-------WDTLTN--- 229 (282)
T ss_dssp CSTTEEEEESCHHHHSTT---------CCCCCEEEEEECCC------------------SHHHH-------HHHHHH---
T ss_pred CcCceEEEEeCHHHHHhh---------CCCCCEEEEEEcCC------------------ccccH-------HHHHHH---
Confidence 6799999999765422 33468999999873 01111 345666
Q ss_pred hhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCC
Q psy17793 214 FVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHP 256 (397)
Q Consensus 214 f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~ 256 (397)
..++|+|||.|+.-.....+. ....+..++++++
T Consensus 230 --------~~p~L~pGGiIv~DD~~~~~G-~~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 230 --------LYPKVSVGGYVIVDDYMMCPP-CKDAVDEYRAKFD 263 (282)
T ss_dssp --------HGGGEEEEEEEEESSCTTCHH-HHHHHHHHHHHTT
T ss_pred --------HHhhcCCCEEEEEcCCCCCHH-HHHHHHHHHHhcC
Confidence 889999999999876533233 3446667777764
No 283
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.25 E-value=2.3e-06 Score=84.56 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..++... +..+++++|+ +.+++.+++ ..+|++..+|+... ++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~------------~~ 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFAS------------VP 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTTC------------CC
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCcccC------------CC
Confidence 4567899999999999999999875 4578999999 888876654 25699999998652 22
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS 238 (397)
. ||+|++. .....+. ... ..++|++ +.+.|||||+|+.....
T Consensus 267 -~-~D~v~~~----------~~lh~~~----d~~-------~~~~l~~-----------~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 267 -Q-GDAMILK----------AVCHNWS----DEK-------CIEFLSN-----------CHKALSPNGKVIIVEFI 308 (372)
T ss_dssp -C-EEEEEEE----------SSGGGSC----HHH-------HHHHHHH-----------HHHHEEEEEEEEEEEEE
T ss_pred -C-CCEEEEe----------cccccCC----HHH-------HHHHHHH-----------HHHhcCCCCEEEEEEec
Confidence 2 8999972 1222233 111 1467888 99999999999987543
No 284
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.22 E-value=3.3e-06 Score=82.77 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=76.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..++++..+|+... ++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~------------~p 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFTS------------IP 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTTC------------CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------CCCcEEEeccccCC------------CC
Confidence 4567899999999999999999875 4568999999 988877654 24699999998652 22
Q ss_pred ccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC---CcEEEEEecCC
Q psy17793 163 KESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK---DGILVYCTCSL 239 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp---gG~lvysTCS~ 239 (397)
.||+|++- .....|. ... ..++|++ +.+.||| ||+|+......
T Consensus 246 --~~D~v~~~----------~~lh~~~----d~~-------~~~~l~~-----------~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 246 --NADAVLLK----------YILHNWT----DKD-------CLRILKK-----------CKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp --CCSEEEEE----------SCGGGSC----HHH-------HHHHHHH-----------HHHHHSGGGCCCEEEEEECEE
T ss_pred --CccEEEee----------hhhccCC----HHH-------HHHHHHH-----------HHHhCCCCCCCcEEEEEEeec
Confidence 39999971 1222333 111 1467888 9999999 99998876543
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.19 E-value=1.5e-05 Score=76.65 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=90.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEEcccccccccchhhHHHhh
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ-----LSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g-----~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
.++||=+|.|.|+.+..++..- +..+|+.+|+|+..++.+++-+.... -.+++++.+|+..+...
T Consensus 84 pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~--------- 153 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--------- 153 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC---------
T ss_pred CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh---------
Confidence 4689999999999998877642 44689999999999999998875532 24699999999988643
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecC--
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCS-- 238 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS-- 238 (397)
..++||+|++|.+-- .|. .. .-.+ ++.++. +.+.|+|||+++.-+-|
T Consensus 154 -~~~~yDvIi~D~~dp-~~~--~~-~L~t---------------~eFy~~-----------~~~~L~p~Gv~v~q~~sp~ 202 (294)
T 3o4f_A 154 -TSQTFDVIISDCTDP-IGP--GE-SLFT---------------SAFYEG-----------CKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp -SSCCEEEEEESCCCC-CCT--TC-CSSC---------------CHHHHH-----------HHHTEEEEEEEEEEEEESS
T ss_pred -ccccCCEEEEeCCCc-CCC--ch-hhcC---------------HHHHHH-----------HHHHhCCCCEEEEecCCcc
Confidence 456899999998721 111 00 0011 344455 77899999999875333
Q ss_pred CCccccHHHHHHHHHHCCCc
Q psy17793 239 LSVEENEAVIAWILHRHPEV 258 (397)
Q Consensus 239 ~~~eEnE~vV~~~L~~~~~~ 258 (397)
+++++-..+.+.+-+.++.+
T Consensus 203 ~~~~~~~~~~~~l~~~F~~v 222 (294)
T 3o4f_A 203 LQQEEAIDSHRKLSHYFSDV 222 (294)
T ss_dssp SCCHHHHHHHHHHHHHCSEE
T ss_pred cChHHHHHHHHHHHhhCCce
Confidence 34444444445544555543
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.14 E-value=2.7e-06 Score=89.92 Aligned_cols=118 Identities=17% Similarity=0.101 Sum_probs=82.3
Q ss_pred CCeEEEEcCCCChH---HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccchhhHHHhhh
Q psy17793 86 GQKVLDMCAAPGNK---LTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSSQIDIERMKL 161 (397)
Q Consensus 86 g~~VLDlcagpG~k---t~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~~~d~~~~~~ 161 (397)
+..|||+|||+|-. ++.+++..+...+|+|||.|+. ...+++..+++|..+ |+++.+|++++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~------------ 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWV------------ 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCC------------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceecc------------
Confidence 34799999999988 5555555444457999999984 556777889999876 999999999873
Q ss_pred cccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCC-
Q psy17793 162 QKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLS- 240 (397)
Q Consensus 162 ~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~- 240 (397)
.++++|+|+...= .+++- .+. + .+.|.. +-++|||||+++=+.|+++
T Consensus 425 LPEKVDIIVSEwM-------------G~fLl-~E~---m----levL~A-----------rdr~LKPgGimiPs~atlyi 472 (637)
T 4gqb_A 425 APEKADIIVSELL-------------GSFAD-NEL---S----PECLDG-----------AQHFLKDDGVSIPGEYTSFL 472 (637)
T ss_dssp CSSCEEEEECCCC-------------BTTBG-GGC---H----HHHHHH-----------HGGGEEEEEEEESCEEEEEE
T ss_pred CCcccCEEEEEcC-------------ccccc-ccC---C----HHHHHH-----------HHHhcCCCcEEccccceEEE
Confidence 3478999997432 11110 111 1 235566 7889999999977766644
Q ss_pred -ccccHHHH
Q psy17793 241 -VEENEAVI 248 (397)
Q Consensus 241 -~eEnE~vV 248 (397)
+-+.+..-
T Consensus 473 api~~~~l~ 481 (637)
T 4gqb_A 473 APISSSKLY 481 (637)
T ss_dssp EEEECHHHH
T ss_pred EEecCHHHH
Confidence 45555443
No 287
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.14 E-value=4.1e-06 Score=80.00 Aligned_cols=123 Identities=15% Similarity=0.105 Sum_probs=77.0
Q ss_pred cCCCCCCeEEEEcC------CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchh
Q psy17793 81 LDVQPGQKVLDMCA------APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQI 154 (397)
Q Consensus 81 L~~~~g~~VLDlca------gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~ 154 (397)
+.+..|++|||+|| +||+. .+..+.+.++.|+++|+.+--. ..+ .++.+|.....
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~----- 165 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVH----- 165 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEE-----
T ss_pred EeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEccccccc-----
Confidence 34567999999997 99993 3445543336999999976331 123 34889976542
Q ss_pred hHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEE
Q psy17793 155 DIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVY 234 (397)
Q Consensus 155 d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvy 234 (397)
..++||+||.|.-...+|.. +.....+ ..|.+.|+.| |.+.|+|||.++.
T Consensus 166 -------~~~k~DLVISDMAPNtTG~~-D~d~~Rs---------------~~L~ElALdf-------A~~~LkpGGsFvV 215 (344)
T 3r24_A 166 -------TANKWDLIISDMYDPRTKHV-TKENDSK---------------EGFFTYLCGF-------IKQKLALGGSIAV 215 (344)
T ss_dssp -------ESSCEEEEEECCCCTTSCSS-CSCCCCC---------------CTHHHHHHHH-------HHHHEEEEEEEEE
T ss_pred -------cCCCCCEEEecCCCCcCCcc-ccchhHH---------------HHHHHHHHHH-------HHHhCcCCCEEEE
Confidence 34789999999876666641 1111111 1122234444 8889999999998
Q ss_pred EecCCCccccHHHHHHHHHHC
Q psy17793 235 CTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 235 sTCS~~~eEnE~vV~~~L~~~ 255 (397)
- -+.-+.++ .+..+.+.+
T Consensus 216 K--VFQGsg~~-~L~~lrk~F 233 (344)
T 3r24_A 216 K--ITEHSWNA-DLYKLMGHF 233 (344)
T ss_dssp E--ECSSSCCH-HHHHHHTTE
T ss_pred E--EecCCCHH-HHHHHHhhC
Confidence 7 34445544 455555433
No 288
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.12 E-value=2.2e-07 Score=81.54 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=65.5
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhh
Q psy17793 81 LDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMK 160 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~ 160 (397)
++.++|++|||++||. +++|+|+.+++.+++++.. ++++..+|+..+.. ..
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~--------~~ 58 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQ--------SA 58 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGG--------GC
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCcc--------cc
Confidence 4578999999999985 2389999999999887532 47888999876531 00
Q ss_pred hcccCccEEEEcCCCCCCCCCccccccc-CccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEe
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNAN-SFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~-s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysT 236 (397)
+..++||+|++.-- .... . +. .++|++ +.++|||||++++..
T Consensus 59 ~~~~~fD~V~~~~~----------l~~~~~--~~-----------~~~l~~-----------~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 59 HKESSFDIILSGLV----------PGSTTL--HS-----------AEILAE-----------IARILRPGGCLFLKE 101 (176)
T ss_dssp CCSSCEEEEEECCS----------TTCCCC--CC-----------HHHHHH-----------HHHHEEEEEEEEEEE
T ss_pred CCCCCEeEEEECCh----------hhhccc--CH-----------HHHHHH-----------HHHHCCCCEEEEEEc
Confidence 14678999997211 0000 1 11 456777 899999999999853
No 289
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.12 E-value=1.2e-05 Score=78.99 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQK 163 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~ 163 (397)
.++.+|||+|||+|..+..++... +..+++++|+ +..++.+++ ..+|++..+|+... ++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~------------~~- 250 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFKS------------IP- 250 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTTC------------CC-
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCCcEEEeCccCCC------------CC-
Confidence 456899999999999999999875 4568999999 777766553 35699999998652 22
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC---CcEEEEEecCC
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK---DGILVYCTCSL 239 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp---gG~lvysTCS~ 239 (397)
.||+|++.- ....|. ... ..++|++ +.+.||| ||+|+......
T Consensus 251 -~~D~v~~~~----------vlh~~~----d~~-------~~~~l~~-----------~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 251 -SADAVLLKW----------VLHDWN----DEQ-------SLKILKN-----------SKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp -CCSEEEEES----------CGGGSC----HHH-------HHHHHHH-----------HHHHTGGGGGGCEEEEEECEE
T ss_pred -CceEEEEcc----------cccCCC----HHH-------HHHHHHH-----------HHHhCCCCCCCcEEEEEEecc
Confidence 499999721 222333 111 1477888 9999999 99998876543
No 290
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.04 E-value=9.7e-07 Score=84.35 Aligned_cols=79 Identities=9% Similarity=-0.046 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
.+..+||+.+|+|..+..+.+ +..+++.+|.++..++.+++|++. .++++++..|+...... ..-+..
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~-------l~~~~~ 158 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNA-------LLPPPE 158 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHH-------HCSCTT
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHH-------hcCCCC
Confidence 356799999999999987655 457999999999999999999976 35699999998664311 001234
Q ss_pred CccEEEEcCCC
Q psy17793 165 SFDRILLDAPC 175 (397)
Q Consensus 165 ~fD~Il~DpPC 175 (397)
+||+|++|||+
T Consensus 159 ~fdLVfiDPPY 169 (283)
T 2oo3_A 159 KRGLIFIDPSY 169 (283)
T ss_dssp SCEEEEECCCC
T ss_pred CccEEEECCCC
Confidence 69999999995
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.00 E-value=8.3e-06 Score=80.79 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
+++|++|||+||+|||+|..++.. +++|+|||..+- ...+ ....+|+++..|+.... ..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l-----~~~l--~~~~~V~~~~~d~~~~~-----------~~ 267 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPM-----AQSL--MDTGQVTWLREDGFKFR-----------PT 267 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCC-----CHHH--HTTTCEEEECSCTTTCC-----------CC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhc-----Chhh--ccCCCeEEEeCcccccc-----------CC
Confidence 578999999999999999998884 579999997641 1112 23357999999988763 13
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
..+||.|++|--
T Consensus 268 ~~~~D~vvsDm~ 279 (375)
T 4auk_A 268 RSNISWMVCDMV 279 (375)
T ss_dssp SSCEEEEEECCS
T ss_pred CCCcCEEEEcCC
Confidence 367999999875
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.00 E-value=8.7e-06 Score=86.45 Aligned_cols=125 Identities=14% Similarity=0.019 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCChHHHHH---HHHcC---------CCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEEcccccccccc
Q psy17793 86 GQKVLDMCAAPGNKLTHI---ALLMN---------DTGTLIALDKSKPRVTKLEETIKKLQLSS-IQTHVYDSTRINTSS 152 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~l---A~~~~---------~~~~V~avD~s~~rl~~l~~n~~~~g~~~-v~~~~~D~~~~~~~~ 152 (397)
+..|||+|||+|..+... ++..+ ...+|+|||.|+.+...++.+.. +|..+ |+++.+|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp- 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGI- 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHH-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccc-
Confidence 348999999999997432 22111 23599999999988877776654 78866 99999999887310
Q ss_pred hhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEE
Q psy17793 153 QIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGIL 232 (397)
Q Consensus 153 ~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~l 232 (397)
. ..-..+++|+|+...- .+++. .++..+.|.. +-++|||||++
T Consensus 488 --~---~~~~~ekVDIIVSElm-------------Gsfl~--------nEL~pe~Ld~-----------v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 488 --A---KDRGFEQPDIIVSELL-------------GSFGD--------NELSPECLDG-----------VTGFLKPTTIS 530 (745)
T ss_dssp --H---HHTTCCCCSEEEECCC-------------BTTBG--------GGSHHHHHHT-----------TGGGSCTTCEE
T ss_pred --c---ccCCCCcccEEEEecc-------------ccccc--------hhccHHHHHH-----------HHHhCCCCcEE
Confidence 0 0001478999998443 11110 1122456777 78999999999
Q ss_pred EEEecCC--CccccHHHHH
Q psy17793 233 VYCTCSL--SVEENEAVIA 249 (397)
Q Consensus 233 vysTCS~--~~eEnE~vV~ 249 (397)
+=+.|++ .|-+.+..-.
T Consensus 531 iP~~~t~ylaPi~~~~l~~ 549 (745)
T 3ua3_A 531 IPQKYTSYVKPIMSTHIHQ 549 (745)
T ss_dssp ESCEEEEEEEEEECHHHHH
T ss_pred ECCccEEEEEEecCHHHHH
Confidence 7666663 3556655433
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.98 E-value=1.9e-05 Score=78.47 Aligned_cols=119 Identities=17% Similarity=0.209 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC---C-----CcEEEEEcccccccccchhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ---L-----SSIQTHVYDSTRINTSSQID 155 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g---~-----~~v~~~~~D~~~~~~~~~~d 155 (397)
.+..+||=+|.|-|+....+++. +..+|+.+|+|+..++.+++-+.... . ++++++..|+..+...
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~---- 277 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR---- 277 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH----
T ss_pred CCCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHh----
Confidence 34579999999999998887764 45789999999999999998653221 1 2488999999877521
Q ss_pred HHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEE
Q psy17793 156 IERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYC 235 (397)
Q Consensus 156 ~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvys 235 (397)
.....++||+|++|.+-...+..|.. +.. ....+++++. +.+.|+|||+++.-
T Consensus 278 ---~~~~~~~yDvIIvDl~D~~~s~~p~g--------~a~-----~Lft~eFy~~-----------~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 278 ---YAKEGREFDYVINDLTAVPISTSPEE--------DST-----WEFLRLILDL-----------SMKVLKQDGKYFTQ 330 (381)
T ss_dssp ---HHHHTCCEEEEEEECCSSCCCCC------------CH-----HHHHHHHHHH-----------HHHTEEEEEEEEEE
T ss_pred ---hhhccCceeEEEECCCCCcccCcccC--------cch-----HHHHHHHHHH-----------HHHhcCCCCEEEEe
Confidence 01123579999999752111111100 001 1123666777 88899999999864
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.84 E-value=2.5e-05 Score=72.53 Aligned_cols=77 Identities=18% Similarity=0.158 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc-ccccccccchhhHHHhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY-DSTRINTSSQIDIERMK 160 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~-D~~~~~~~~~~d~~~~~ 160 (397)
.++++..|||+|||||+++..++... +..+|+|+|+-..--+. -...+.+|.+.|++..+ |+...
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~------------ 140 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYL------------ 140 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGC------------
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeec------------
Confidence 45789999999999999998777654 45689999996543210 01124567777999988 87554
Q ss_pred hcccCccEEEEcC
Q psy17793 161 LQKESFDRILLDA 173 (397)
Q Consensus 161 ~~~~~fD~Il~Dp 173 (397)
...++|.||||-
T Consensus 141 -~~~~~DtllcDI 152 (267)
T 3p8z_A 141 -PPEKCDTLLCDI 152 (267)
T ss_dssp -CCCCCSEEEECC
T ss_pred -CCccccEEEEec
Confidence 235799999985
No 295
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.80 E-value=6.7e-05 Score=74.69 Aligned_cols=83 Identities=17% Similarity=0.211 Sum_probs=60.6
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCc
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESF 166 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~f 166 (397)
.+|||++||.|+.+.-+... +-..|+|+|+++.+++..+.|. .+..+++.|+.++... +..........+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~---~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAE---IIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHH---HHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHH---HHHhhcccCCCe
Confidence 47999999999999877664 3456889999999999988774 3456788898876321 100001123579
Q ss_pred cEEEEcCCCCCCC
Q psy17793 167 DRILLDAPCSGFG 179 (397)
Q Consensus 167 D~Il~DpPCSg~G 179 (397)
|+|+.+|||-+..
T Consensus 73 D~i~ggpPCQ~fS 85 (376)
T 3g7u_A 73 DGIIGGPPCQGFS 85 (376)
T ss_dssp CEEEECCCCCTTC
T ss_pred eEEEecCCCCCcc
Confidence 9999999997754
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.74 E-value=6.3e-05 Score=71.91 Aligned_cols=131 Identities=13% Similarity=0.089 Sum_probs=78.8
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEc-ccccccccchhhHHHhh
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVY-DSTRINTSSQIDIERMK 160 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~-D~~~~~~~~~~d~~~~~ 160 (397)
.++++..|||+|||||+++..++... +...|+|+|+-..--+. -...+.+|.+.|.+... |+..+
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l------------ 156 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYR------------ 156 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSS------------
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhC------------
Confidence 35788899999999999998777653 45589999997652100 00012344445777776 77655
Q ss_pred hcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCC-cEEEEEecCC
Q psy17793 161 LQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKD-GILVYCTCSL 239 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpg-G~lvysTCS~ 239 (397)
....+|.|+||.- -.+|. |. -+.... .+.|+- +.++|++| |.++.- -+
T Consensus 157 -~~~~~D~ivcDig-eSs~~-~~----------ve~~Rt-----l~vLel-----------~~~wL~~~~~~f~~K--Vl 205 (321)
T 3lkz_A 157 -PSECCDTLLCDIG-ESSSS-AE----------VEEHRT-----IRVLEM-----------VEDWLHRGPREFCVK--VL 205 (321)
T ss_dssp -CCCCCSEEEECCC-CCCSC-HH----------HHHHHH-----HHHHHH-----------HHHHHTTCCCEEEEE--ES
T ss_pred -CCCCCCEEEEECc-cCCCC-hh----------hhhhHH-----HHHHHH-----------HHHHhccCCCcEEEE--Ec
Confidence 2256999999875 22111 00 011111 224554 77788888 766654 23
Q ss_pred Cc--cccHHHHHHHHHHCCC
Q psy17793 240 SV--EENEAVIAWILHRHPE 257 (397)
Q Consensus 240 ~~--eEnE~vV~~~L~~~~~ 257 (397)
.| ++-.+-++.+-.++.+
T Consensus 206 ~pY~~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 206 CPYMPKVIEKMELLQRRYGG 225 (321)
T ss_dssp CTTSHHHHHHHHHHHHHHCC
T ss_pred CCCChHHHHHHHHHHHHhCC
Confidence 34 4444456666666654
No 297
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.65 E-value=5.4e-05 Score=74.33 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=55.5
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCc
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESF 166 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~f 166 (397)
.+|||++||.|+.+..+...-.....|+++|+++.+++..+.|.. +..++++|+.++... .+....+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~--------~~~~~~~ 69 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLE--------EFDRLSF 69 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHH--------HHHHHCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHh--------HcCcCCc
Confidence 479999999999998877641012379999999999999998863 334677888776311 1111269
Q ss_pred cEEEEcCCCCCCC
Q psy17793 167 DRILLDAPCSGFG 179 (397)
Q Consensus 167 D~Il~DpPCSg~G 179 (397)
|+|+.+|||-+..
T Consensus 70 D~l~~gpPCq~fS 82 (343)
T 1g55_A 70 DMILMSPPCQPFT 82 (343)
T ss_dssp SEEEECCC-----
T ss_pred CEEEEcCCCcchh
Confidence 9999999997654
No 298
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.62 E-value=0.00012 Score=71.57 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=57.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccC
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKES 165 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~ 165 (397)
+-+|+|++||.|+.+..+... +-..|+++|+++.+++..+.|..... ..|..++... ....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~----------~~~~ 71 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEK----------TIPD 71 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGG----------GSCC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHh----------hCCC
Confidence 458999999999999877663 45578999999999999999864321 5787766321 1135
Q ss_pred ccEEEEcCCCCCCC
Q psy17793 166 FDRILLDAPCSGFG 179 (397)
Q Consensus 166 fD~Il~DpPCSg~G 179 (397)
+|+|+.+|||-+..
T Consensus 72 ~D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 72 HDILCAGFPCQAFS 85 (327)
T ss_dssp CSEEEEECCCTTTC
T ss_pred CCEEEECCCCCCcc
Confidence 99999999997754
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.15 E-value=0.00091 Score=63.98 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQ 134 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g 134 (397)
.+|+.|||.+||+|..+..++.+ +.+++++|+++..++.+++++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 68999999999999988766553 3589999999999999999998864
No 300
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.00 E-value=0.0017 Score=65.09 Aligned_cols=64 Identities=14% Similarity=0.277 Sum_probs=52.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHH-HHcCCCcEEEEEeCCHHHHHHHHHHHHH---hCC-CcEEEEEccc
Q psy17793 82 DVQPGQKVLDMCAAPGNKLTHIA-LLMNDTGTLIALDKSKPRVTKLEETIKK---LQL-SSIQTHVYDS 145 (397)
Q Consensus 82 ~~~~g~~VLDlcagpG~kt~~lA-~~~~~~~~V~avD~s~~rl~~l~~n~~~---~g~-~~v~~~~~D~ 145 (397)
.+++++.|+|+||..|..|..++ ...++.++|+|+|.++..++.+++|++. .+. .+++++..-+
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 45789999999999999999888 4444448999999999999999999998 346 6777765443
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.94 E-value=0.0057 Score=59.00 Aligned_cols=130 Identities=14% Similarity=0.124 Sum_probs=79.0
Q ss_pred CeEEEEcCCCChHHHHHH---HHcCCCc--EEEEEeCCHH--------HHHHHHH-HHHHhC---CCc--EEEEEccccc
Q psy17793 87 QKVLDMCAAPGNKLTHIA---LLMNDTG--TLIALDKSKP--------RVTKLEE-TIKKLQ---LSS--IQTHVYDSTR 147 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA---~~~~~~~--~V~avD~s~~--------rl~~l~~-n~~~~g---~~~--v~~~~~D~~~ 147 (397)
-+|||+|-|+|.-++... ...++.. +.+++|..+- -+..+.+ .+.+.. -.+ +.+..+|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 479999999998654322 2223444 4577776431 1222222 222221 123 4567788876
Q ss_pred ccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Q psy17793 148 INTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLK 227 (397)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLk 227 (397)
.... +....||+|++|+ .+-.++|++ |+ .++++. ..++++
T Consensus 178 ~l~~---------l~~~~~Da~flDg--FsP~kNPeL---Ws---------------~e~f~~-----------l~~~~~ 217 (308)
T 3vyw_A 178 RIKE---------VENFKADAVFHDA--FSPYKNPEL---WT---------------LDFLSL-----------IKERID 217 (308)
T ss_dssp HGGG---------CCSCCEEEEEECC--SCTTTSGGG---GS---------------HHHHHH-----------HHTTEE
T ss_pred HHhh---------hcccceeEEEeCC--CCcccCccc---CC---------------HHHHHH-----------HHHHhC
Confidence 5421 3334799999997 222345553 55 556677 889999
Q ss_pred CCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEecC
Q psy17793 228 KDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTL 264 (397)
Q Consensus 228 pgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~~~ 264 (397)
|||+++--||+ ..|++.|+.. +|++....
T Consensus 218 pgg~laTYtaa-------g~VRR~L~~a-GF~V~k~~ 246 (308)
T 3vyw_A 218 EKGYWVSYSSS-------LSVRKSLLTL-GFKVGSSR 246 (308)
T ss_dssp EEEEEEESCCC-------HHHHHHHHHT-TCEEEEEE
T ss_pred CCcEEEEEeCc-------HHHHHHHHHC-CCEEEecC
Confidence 99998744443 5899999988 68876654
No 302
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.92 E-value=0.0011 Score=57.15 Aligned_cols=64 Identities=17% Similarity=0.066 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCCC-hHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPG-NKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG-~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.++.+|||+|||+| ..+..|++. .+..|+|+|+++.+++ +++.|.++.... .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~---------------~v~dDiF~P~~~----------~ 86 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG---------------IVRDDITSPRME----------I 86 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT---------------EECCCSSSCCHH----------H
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc---------------eEEccCCCCccc----------c
Confidence 45679999999999 588888874 3467999999998876 777888764210 1
Q ss_pred ccCccEE-EEcCC
Q psy17793 163 KESFDRI-LLDAP 174 (397)
Q Consensus 163 ~~~fD~I-l~DpP 174 (397)
-+.||+| ..+||
T Consensus 87 Y~~~DLIYsirPP 99 (153)
T 2k4m_A 87 YRGAALIYSIRPP 99 (153)
T ss_dssp HTTEEEEEEESCC
T ss_pred cCCcCEEEEcCCC
Confidence 1479999 89999
No 303
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.91 E-value=0.0014 Score=63.95 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=56.4
Q ss_pred eEEEEcCCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCc
Q psy17793 88 KVLDMCAAPGNKLTHIALLMND-TGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESF 166 (397)
Q Consensus 88 ~VLDlcagpG~kt~~lA~~~~~-~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~f 166 (397)
+++|++||.||.+.-+... +- .-.|+|+|+++.+.+..+.|.. +..+...|..++... .+....+
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~--------~~~~~~~ 70 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQ--------VIKKWNV 70 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHH--------HHHHTTC
T ss_pred EEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHH--------HhccCCC
Confidence 7999999999999877654 21 1358899999999999888753 234567888776311 1222369
Q ss_pred cEEEEcCCCCCC
Q psy17793 167 DRILLDAPCSGF 178 (397)
Q Consensus 167 D~Il~DpPCSg~ 178 (397)
|+|+.-|||-+.
T Consensus 71 D~l~ggpPCQ~f 82 (333)
T 4h0n_A 71 DTILMSPPCQPF 82 (333)
T ss_dssp CEEEECCCCCCS
T ss_pred CEEEecCCCcch
Confidence 999999999765
No 304
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.91 E-value=0.0025 Score=61.22 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGT-LIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~-V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
..+-+|+|++||.||.+.-+... +-... |+++|+++.+.+..+.|. .+..+...|.+++... + .+ .
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~---~---i~-~ 80 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQK---H---IQ-E 80 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHH---H---HH-H
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHH---H---hc-c
Confidence 34558999999999999766653 21222 699999999998887764 2345778898877421 1 11 1
Q ss_pred ccCccEEEEcCCCCCC
Q psy17793 163 KESFDRILLDAPCSGF 178 (397)
Q Consensus 163 ~~~fD~Il~DpPCSg~ 178 (397)
.+.+|+|+..|||-+.
T Consensus 81 ~~~~Dll~ggpPCQ~f 96 (295)
T 2qrv_A 81 WGPFDLVIGGSPCNDL 96 (295)
T ss_dssp TCCCSEEEECCCCGGG
T ss_pred cCCcCEEEecCCCccc
Confidence 1469999999999653
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.84 E-value=0.0013 Score=64.08 Aligned_cols=77 Identities=12% Similarity=0.245 Sum_probs=56.3
Q ss_pred CeEEEEcCCCChHHHHHHHHcC-CCcEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhccc
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMN-DTGTL-IALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKE 164 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~-~~~~V-~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~ 164 (397)
-+|+|++||.||.+.-+... + +.-.| +|+|+++.+.+..+.|.... ++..|..++... .+...
T Consensus 11 ~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~------~~~~DI~~~~~~--------~i~~~ 75 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE------VQVKNLDSISIK--------QIESL 75 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC------CBCCCTTTCCHH--------HHHHT
T ss_pred CEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC------cccCChhhcCHH--------HhccC
Confidence 48999999999999776653 1 12356 79999999999999886321 456787766311 12223
Q ss_pred CccEEEEcCCCCCC
Q psy17793 165 SFDRILLDAPCSGF 178 (397)
Q Consensus 165 ~fD~Il~DpPCSg~ 178 (397)
.+|+|+.-|||-+.
T Consensus 76 ~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 76 NCNTWFMSPPCQPY 89 (327)
T ss_dssp CCCEEEECCCCTTC
T ss_pred CCCEEEecCCccCc
Confidence 69999999999887
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.82 E-value=0.0019 Score=63.66 Aligned_cols=80 Identities=19% Similarity=0.050 Sum_probs=59.8
Q ss_pred CcEEEechhH-HHHHhccCCC------CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 65 SMGILQNLPS-ILAGHYLDVQ------PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 65 g~~~~Qd~~S-~l~~~~L~~~------~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
|.-++-|+.- .-++..++++ +++.|||+|.|+|..|..|++.. ...+|+|+|+|+..+..+++.+ . ..+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~-~--~~~ 106 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKF-E--GSP 106 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHT-T--TSS
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhc-c--CCC
Confidence 3334445442 2344455555 36899999999999999999853 2458999999999999998876 2 368
Q ss_pred EEEEEcccccc
Q psy17793 138 IQTHVYDSTRI 148 (397)
Q Consensus 138 v~~~~~D~~~~ 148 (397)
++++.+|+.++
T Consensus 107 l~ii~~D~l~~ 117 (353)
T 1i4w_A 107 LQILKRDPYDW 117 (353)
T ss_dssp CEEECSCTTCH
T ss_pred EEEEECCccch
Confidence 99999999766
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.74 E-value=0.0017 Score=60.82 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=39.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
.+|+.|||.+||+|..+..++. + +.+++++|+++..++.+++|++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~-~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKK-L--GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHH-T--TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHH-c--CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 6899999999999988765544 3 35899999999999999999987764
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.60 E-value=0.0033 Score=60.53 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=56.0
Q ss_pred eEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccCcc
Q psy17793 88 KVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFD 167 (397)
Q Consensus 88 ~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD 167 (397)
+|||++||.||.+.-+-.. +--.|.|+|+++.+++..+.|. . -.++.+|.+++... .-..+|
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~-----~-~~~~~~DI~~i~~~----------~~~~~D 63 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH-----S-AKLIKGDISKISSD----------EFPKCD 63 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC-----C-SEEEESCGGGCCGG----------GSCCCS
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC-----C-CCcccCChhhCCHh----------hCCccc
Confidence 6999999999999766542 3446789999999999988773 2 25678898877421 124689
Q ss_pred EEEEcCCCCCC
Q psy17793 168 RILLDAPCSGF 178 (397)
Q Consensus 168 ~Il~DpPCSg~ 178 (397)
+|+.=|||-+.
T Consensus 64 ~l~ggpPCQ~f 74 (331)
T 3ubt_Y 64 GIIGGPPSQSW 74 (331)
T ss_dssp EEECCCCGGGT
T ss_pred EEEecCCCCCc
Confidence 99999999764
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.04 E-value=0.021 Score=55.50 Aligned_cols=53 Identities=26% Similarity=0.276 Sum_probs=39.9
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE
Confidence 34688999999999765 56667777765 3348999999999987764 578764
No 310
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.01 E-value=0.0065 Score=57.97 Aligned_cols=79 Identities=14% Similarity=0.163 Sum_probs=45.9
Q ss_pred CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhh
Q psy17793 136 SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFV 215 (397)
Q Consensus 136 ~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~ 215 (397)
..++++++|+...... +..++||+|++|||+.............. +. .....+......++..
T Consensus 20 ~~~~i~~gD~~~~l~~---------l~~~s~DlIvtdPPY~~~~~y~~~~~~~~--~~-~~~~~~l~~l~~~~~~----- 82 (297)
T 2zig_A 20 GVHRLHVGDAREVLAS---------FPEASVHLVVTSPPYWTLKRYEDTPGQLG--HI-EDYEAFLDELDRVWRE----- 82 (297)
T ss_dssp -CEEEEESCHHHHHTT---------SCTTCEEEEEECCCCCCCC-------CCH--HH-HHHHHHHHHHHHHHHH-----
T ss_pred cCCEEEECcHHHHHhh---------CCCCceeEEEECCCCCCccccCCChhhhc--cc-ccHHHHHHHHHHHHHH-----
Confidence 4578999999875321 34578999999999854321000000000 01 1112222222567777
Q ss_pred ccccccccccccCCcEEEEEec
Q psy17793 216 SLFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 216 ~~~~~~a~~lLkpgG~lvysTC 237 (397)
+.++|||||.+++...
T Consensus 83 ------~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 83 ------VFRLLVPGGRLVIVVG 98 (297)
T ss_dssp ------HHHHEEEEEEEEEEEC
T ss_pred ------HHHHcCCCcEEEEEEC
Confidence 9999999999987643
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.77 E-value=0.011 Score=60.63 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=56.9
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchh---hH---HHhh
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQI---DI---ERMK 160 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~---d~---~~~~ 160 (397)
-+++|+|||.||.+.-+... +--.|+|+|+++.+++..+.|... ..+..+++.|...+...... +. ....
T Consensus 89 ~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhhh
Confidence 48999999999999766542 333589999999999988877421 12334567888765311000 00 0000
Q ss_pred hcccCccEEEEcCCCCCCC
Q psy17793 161 LQKESFDRILLDAPCSGFG 179 (397)
Q Consensus 161 ~~~~~fD~Il~DpPCSg~G 179 (397)
.....+|+|+.-|||-+..
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHSCCCSEEEEECCCCCC-
T ss_pred hcCCCCCEEEecCCCcchh
Confidence 1124689999999997653
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.72 E-value=0.018 Score=56.34 Aligned_cols=53 Identities=21% Similarity=0.252 Sum_probs=40.4
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ ++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 45678999999999866 666777777653 337999999999988764 467653
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.63 E-value=0.022 Score=54.98 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=40.7
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..+++|++||-.|||+ |..++++|..+ +.+|+++|.++++++.++ ++|.+.
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~ 213 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLAR----RLGAEV 213 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHH----HcCCCE
Confidence 4678999999999876 77788888875 359999999999988764 578654
No 314
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.55 E-value=0.029 Score=54.19 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=46.4
Q ss_pred cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhc
Q psy17793 137 SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVS 216 (397)
Q Consensus 137 ~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~ 216 (397)
...++++|...... .+..++||+|++|||+...... .+. + .....+...-..+|..
T Consensus 14 ~~~ii~gD~~~~l~---------~l~~~svDlI~tDPPY~~~~~~-----~y~--~--~~~~~~~~~l~~~l~~------ 69 (323)
T 1boo_A 14 NGSMYIGDSLELLE---------SFPEESISLVMTSPPFALQRKK-----EYG--N--LEQHEYVDWFLSFAKV------ 69 (323)
T ss_dssp SEEEEESCHHHHGG---------GSCSSCEEEEEECCCCSSSCSC-----SSC--S--CHHHHHHHHHHHHHHH------
T ss_pred CceEEeCcHHHHHh---------hCCCCCeeEEEECCCCCCCccc-----ccC--C--cCHHHHHHHHHHHHHH------
Confidence 47888999876532 1345789999999998543210 111 1 1122333333677777
Q ss_pred cccccccccccCCcEEEEEec
Q psy17793 217 LFDWQGIPLLKKDGILVYCTC 237 (397)
Q Consensus 217 ~~~~~a~~lLkpgG~lvysTC 237 (397)
+.++||+||.+++...
T Consensus 70 -----~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 70 -----VNKKLKPDGSFVVDFG 85 (323)
T ss_dssp -----HHHHEEEEEEEEEEEC
T ss_pred -----HHHHCcCCcEEEEEEC
Confidence 8999999999988754
No 315
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.53 E-value=0.031 Score=53.93 Aligned_cols=51 Identities=16% Similarity=0.224 Sum_probs=40.1
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.+++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~----~lGa~~ 219 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAR----EVGADA 219 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HcCCCE
Confidence 578999999998865 66677777765 3569999999999988764 578764
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.50 E-value=0.011 Score=58.45 Aligned_cols=50 Identities=26% Similarity=0.327 Sum_probs=39.7
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
.++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ ++|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC
Confidence 4678999999999876 677778888753 348999999999987764 4676
No 317
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.32 E-value=0.068 Score=51.73 Aligned_cols=52 Identities=21% Similarity=0.161 Sum_probs=38.8
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..+ +.+|+++|.++++++.++ ++|.+.
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~ 215 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAK----NCGADV 215 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHH----HhCCCE
Confidence 34678999999999754 55566777664 346999999999988764 578763
No 318
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.32 E-value=0.028 Score=55.71 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHc--------------CCCcEEEEEeCCHHHHHHHHHHHH
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM--------------NDTGTLIALDKSKPRVTKLEETIK 131 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~--------------~~~~~V~avD~s~~rl~~l~~n~~ 131 (397)
..+|+|+|||+|..|+.++..+ .+..+|+.+|.-..-...+=+.+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 4689999999999998874422 134677777877666655544443
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.24 E-value=0.047 Score=53.33 Aligned_cols=53 Identities=15% Similarity=0.128 Sum_probs=39.3
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ ++|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 34678999999998754 555667777653 348999999999987764 578754
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.22 E-value=0.03 Score=54.83 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=40.3
Q ss_pred hccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 79 HYLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
....+++|++||=.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAE----EVGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 345688999999998865 55666777765 3348999999999987665 468754
No 321
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.21 E-value=0.038 Score=58.71 Aligned_cols=133 Identities=11% Similarity=0.085 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcC-----------CCcEEEEEeCCHHHHHHHHH--------------HHHHh-----C
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMN-----------DTGTLIALDKSKPRVTKLEE--------------TIKKL-----Q 134 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~-----------~~~~V~avD~s~~rl~~l~~--------------n~~~~-----g 134 (397)
+.-+|+|+|.|+|.-.+.+.+... ...+++++|..|-..+.+++ .++.+ |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 345899999999998876665421 12579999995544444433 22222 2
Q ss_pred C-----C----cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHH
Q psy17793 135 L-----S----SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQK 205 (397)
Q Consensus 135 ~-----~----~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~ 205 (397)
+ . .+++..+|+....... .......||.+++|+-. -.++|+ .|+ .
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~------~~~~~~~~da~flD~f~--p~~np~---~w~---------------~ 191 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTL------DDSLNNQVDAWFLDGFA--PAKNPD---MWN---------------E 191 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGC------CGGGTTCEEEEEECSSC--C--CCT---TCS---------------H
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhc------ccccCCceeEEEECCCC--CCCChh---hhh---------------H
Confidence 1 1 2556777776654210 00013579999999841 123444 344 3
Q ss_pred HHHHHHhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 206 KLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 206 ~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
+++.. ..+++++||++..-||. ..|+..|.+. ++.+..
T Consensus 192 ~~~~~-----------l~~~~~~g~~~~t~~~~-------~~vr~~l~~a-Gf~~~~ 229 (689)
T 3pvc_A 192 QLFNA-----------MARMTRPGGTFSTFTAA-------GFVRRGLQQA-GFNVTK 229 (689)
T ss_dssp HHHHH-----------HHHHEEEEEEEEESCCC-------HHHHHHHHHT-TCEEEE
T ss_pred HHHHH-----------HHHHhCCCCEEEeccCc-------HHHHHHHHhC-CeEEEe
Confidence 45555 67788999998765554 3677777776 465554
No 322
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.04 E-value=0.058 Score=52.74 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=38.9
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 34678999999998754 55566777765 3348999999999987764 578753
No 323
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.00 E-value=0.063 Score=52.43 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=39.0
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HhCCce
Confidence 34678999999998754 55566777764 2338999999999988764 578754
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.94 E-value=0.042 Score=53.11 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=40.0
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSI 138 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v 138 (397)
..+++|++||-.|||+ |..++++|..+ +.+|+++|.++++++.++ ++|.+.+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~v 224 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDAL----SMGVKHF 224 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHH----HTTCSEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHH----hcCCCee
Confidence 3678999999998765 66667777765 358999999999988664 5787653
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.92 E-value=0.078 Score=51.28 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=39.4
Q ss_pred hccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 79 HYLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 79 ~~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
....+++|++||=.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIAL----EYGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHH----HHTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHH----HhCCce
Confidence 345678999999998765 55566777654 2337999999999987765 468753
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.90 E-value=0.09 Score=51.43 Aligned_cols=53 Identities=17% Similarity=0.238 Sum_probs=39.8
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||=.|||+ |..++++|..++ ..+|+++|.++++++.++ ++|.+.
T Consensus 188 ~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 35678999999998754 566667777653 348999999999988664 578754
No 327
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.90 E-value=0.068 Score=52.11 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=39.0
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ ++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 34678999999998754 455666776652 338999999999988765 468754
No 328
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.87 E-value=0.069 Score=52.14 Aligned_cols=53 Identities=13% Similarity=0.142 Sum_probs=39.0
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..++++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCce
Confidence 34678999999998754 55566677664 2338999999999988764 578753
No 329
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.85 E-value=0.26 Score=45.43 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccccccccc-chhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPG-NKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTS-SQIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG-~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~-~~~d~~~~~~ 161 (397)
.|+.+|=.||+.+ |.+..+|..+ ..+.+|+.+|.+++.++.+.+.+++.+-.++.++..|.++...- ...+.....+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788898888653 5666666543 34678999999999999999888888766788889998764210 0001111112
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
++.|.++.++-.
T Consensus 85 --G~iD~lvnnAg~ 96 (256)
T 4fs3_A 85 --GNIDGVYHSIAF 96 (256)
T ss_dssp --CCCSEEEECCCC
T ss_pred --CCCCEEEecccc
Confidence 679999987753
No 330
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.64 E-value=0.053 Score=52.94 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=35.2
Q ss_pred CCCeEEEEcC-C-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 85 PGQKVLDMCA-A-PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 85 ~g~~VLDlca-g-pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
+|++||=.|+ | .|..++++|..+ .+.+|+++|.++++++.++ ++|.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-~g~~Vi~~~~~~~~~~~~~----~lGad~ 220 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-TDLTVIATASRPETQEWVK----SLGAHH 220 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHH----HTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHH----HcCCCE
Confidence 7889998873 3 255666777654 3569999999999988765 478754
No 331
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.51 E-value=0.04 Score=54.24 Aligned_cols=77 Identities=5% Similarity=-0.061 Sum_probs=50.4
Q ss_pred CeEEEEcCCCChHHHHHHHH---------------cCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccc
Q psy17793 87 QKVLDMCAAPGNKLTHIALL---------------MNDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINT 150 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~---------------~~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~ 150 (397)
-+|+|+||++|..|+.+... -.+...|+.+|.-..-+..+-+++..+.- ++-.+..+....+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 47999999999888754443 12357899999999988888776653211 022344444444322
Q ss_pred cchhhHHHhhhcccCccEEEE
Q psy17793 151 SSQIDIERMKLQKESFDRILL 171 (397)
Q Consensus 151 ~~~~d~~~~~~~~~~fD~Il~ 171 (397)
. .++.++||.|..
T Consensus 133 r--------lfp~~S~d~v~S 145 (359)
T 1m6e_X 133 R--------LFPRNTLHFIHS 145 (359)
T ss_dssp C--------CSCTTCBSCEEE
T ss_pred c--------cCCCCceEEEEe
Confidence 1 256788999975
No 332
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.41 E-value=0.27 Score=47.61 Aligned_cols=49 Identities=24% Similarity=0.176 Sum_probs=37.1
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHH
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEET 129 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n 129 (397)
...+++|++||=.|||+ |..++++|..+ +...|+++|.++++++.+++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh
Confidence 34678999999998755 56666777765 233499999999999888753
No 333
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.22 E-value=0.44 Score=43.30 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcC--CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMN--DTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~--~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.+.+||=.| |+|+.+.+++..+. .+.+|+.++.++..++.+.+.++..+ .++.++..|..+...- ... .....
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~--~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSI--RALRDFLRK 78 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHH--HHHHHHHHH
Confidence 355677554 66888888887553 35789999999998888887777765 3578888998764210 000 00000
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
..+.+|.|+.++-
T Consensus 79 ~~g~id~li~~Ag 91 (276)
T 1wma_A 79 EYGGLDVLVNNAG 91 (276)
T ss_dssp HHSSEEEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 1147899998664
No 334
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.18 E-value=0.018 Score=53.68 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=44.0
Q ss_pred EEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhcc
Q psy17793 138 IQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSL 217 (397)
Q Consensus 138 v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~ 217 (397)
.+++++|+..... ....++||+|++|||+....... ... .....+...-..+|..
T Consensus 5 ~~l~~gD~~~~l~---------~l~~~~vdlI~~DPPY~~~~~~~---d~~------~~~~~y~~~~~~~l~~------- 59 (260)
T 1g60_A 5 NKIHQMNCFDFLD---------QVENKSVQLAVIDPPYNLSKADW---DSF------DSHNEFLAFTYRWIDK------- 59 (260)
T ss_dssp SSEEECCHHHHHH---------HSCTTCEEEEEECCCCSSCSSGG---GCC------SSHHHHHHHHHHHHHH-------
T ss_pred CeEEechHHHHHH---------hccccccCEEEECCCCCCCcccc---ccc------CCHHHHHHHHHHHHHH-------
Confidence 3567888866532 13456899999999985321110 001 0112222333667777
Q ss_pred ccccccccccCCcEEEEEecC
Q psy17793 218 FDWQGIPLLKKDGILVYCTCS 238 (397)
Q Consensus 218 ~~~~a~~lLkpgG~lvysTCS 238 (397)
+.++|++||.++...|.
T Consensus 60 ----~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 60 ----VLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp ----HHHHEEEEEEEEEEECH
T ss_pred ----HHHHhcCCeEEEEEcCc
Confidence 88999999999887543
No 335
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.094 Score=51.30 Aligned_cols=50 Identities=20% Similarity=0.239 Sum_probs=38.8
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.+++|++||-.|+|+ |..++++|..+ +.+|+++|.++++++.++ ++|.+.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~----~lGa~~ 241 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAK----ALGADE 241 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCcE
Confidence 678999999999865 56667777765 357999999999988765 368654
No 336
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.16 E-value=0.24 Score=49.48 Aligned_cols=45 Identities=9% Similarity=0.034 Sum_probs=34.7
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCCcE----EEEEeCCHHHHHHHHHHHH
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDTGT----LIALDKSKPRVTKLEETIK 131 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~~~----V~avD~s~~rl~~l~~n~~ 131 (397)
-+|+|+|||.||.+..+-..-.+-.. |.|+|+++.+++..+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 38999999999998876653100123 8999999999999888864
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.87 E-value=0.074 Score=51.27 Aligned_cols=51 Identities=12% Similarity=0.003 Sum_probs=38.1
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
++ +|++||-.|+|+ |..++++|..+.++.+|+++|.++++++.++ ++|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCE
Confidence 67 899999999864 5566677776521358999999999987765 467654
No 338
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.84 E-value=0.6 Score=46.25 Aligned_cols=78 Identities=13% Similarity=-0.046 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHc----------------CCCcEEEEEeCCHHHHHHHHHH-------H-HHhCC-CcEEE
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM----------------NDTGTLIALDKSKPRVTKLEET-------I-KKLQL-SSIQT 140 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~----------------~~~~~V~avD~s~~rl~~l~~n-------~-~~~g~-~~v~~ 140 (397)
..+|+|+||++|..|+.+...+ .+...|+.+|.-..-+..+=+. + +..|- .+-.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4689999999999999877651 1346789999873333222111 1 12231 12245
Q ss_pred EEcccccccccchhhHHHhhhcccCccEEEE
Q psy17793 141 HVYDSTRINTSSQIDIERMKLQKESFDRILL 171 (397)
Q Consensus 141 ~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~ 171 (397)
..+....+... .++.++||.|..
T Consensus 133 ~~gvpgSFy~r--------lfp~~S~d~v~S 155 (384)
T 2efj_A 133 IGAMPGSFYSR--------LFPEESMHFLHS 155 (384)
T ss_dssp EEECCSCTTSC--------CSCTTCEEEEEE
T ss_pred EEecchhhhhc--------cCCCCceEEEEe
Confidence 55555554322 256789999976
No 339
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.64 E-value=0.18 Score=48.94 Aligned_cols=52 Identities=13% Similarity=0.075 Sum_probs=39.3
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||=.|+|+ |..++++|..+ +.+|+++|.++++++.++ ++|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHH----HcCCCE
Confidence 34578999999999765 55666777764 358999999999988764 468754
No 340
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.61 E-value=0.073 Score=51.40 Aligned_cols=49 Identities=20% Similarity=0.165 Sum_probs=37.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHhC
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSK---PRVTKLEETIKKLQ 134 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~---~rl~~l~~n~~~~g 134 (397)
..+|+.|||.+||+|..+..... + +-+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~-~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQ-E--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHH-H--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHH-c--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 36899999999999987654444 3 35799999999 99999999998776
No 341
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.50 E-value=0.053 Score=52.32 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=41.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 83 VQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 83 ~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
..+|+.|||.+||+|..+. .|..+ +-+.+++|+++..++.+++++++.+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~-aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGL-VAERE--SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHHHH-HHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHHHH-HHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 3689999999999998664 44443 35899999999999999999887765
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.49 E-value=0.85 Score=43.53 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=38.7
Q ss_pred ccCCCCCCeEEEEcCCCCh-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAPGN-KLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagpG~-kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
....++|++||=.|||+.+ .++++|..+ +...++++|.++++++.++ ++|.+.
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHH----HcCCeE
Confidence 3467899999999887643 455666665 4557899999999987664 578764
No 343
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.47 E-value=0.19 Score=48.17 Aligned_cols=52 Identities=19% Similarity=0.136 Sum_probs=38.3
Q ss_pred cCCCCCCeEEEEcCCCCh-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAAPGN-KLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcagpG~-kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..+++|++||=.|||+++ .++++|..+ .+.+|+++|.++++++.+ +++|.+.
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~----~~~Ga~~ 211 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLA----KKIGADV 211 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHH----HHTTCSE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhh----hhcCCeE
Confidence 457899999999998754 444555544 467999999999987655 4567654
No 344
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.46 E-value=0.19 Score=47.07 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc------CCCcEEEEEe-----CCH----------------------HHHHHH---HH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM------NDTGTLIALD-----KSK----------------------PRVTKL---EE 128 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~------~~~~~V~avD-----~s~----------------------~rl~~l---~~ 128 (397)
|| .|+++|+.-|+-+..+|.+. +...+|+++| ..+ +.++.+ .+
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 45 79999999999988877642 2357899999 221 112211 12
Q ss_pred HHHHhCC--CcEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHH
Q psy17793 129 TIKKLQL--SSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKK 206 (397)
Q Consensus 129 n~~~~g~--~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~ 206 (397)
+.+++|. ++|+++.+++...+... ....+..+||.|.+|.- ..... ..
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~-----l~~~~~~~~dlv~ID~D------------------~Y~~t-------~~ 198 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRY-----LAENPQTVIALAYFDLD------------------LYEPT-------KA 198 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHH-----HHHCTTCCEEEEEECCC------------------CHHHH-------HH
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHH-----HHhCCCCceEEEEEcCc------------------ccchH-------HH
Confidence 2234665 57999999997653110 00113347999999874 01111 34
Q ss_pred HHHHHhhhhccccccccccccCCcEEEEEecCC--CccccHHHHHHHHHHC
Q psy17793 207 LLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSL--SVEENEAVIAWILHRH 255 (397)
Q Consensus 207 lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~--~~eEnE~vV~~~L~~~ 255 (397)
.++. ...+|+|||.|++-.... .+.+ ...+..+++++
T Consensus 199 ~le~-----------~~p~l~~GGvIv~DD~~~~~w~G~-~~A~~ef~~~~ 237 (257)
T 3tos_A 199 VLEA-----------IRPYLTKGSIVAFDELDNPKWPGE-NIAMRKVLGLD 237 (257)
T ss_dssp HHHH-----------HGGGEEEEEEEEESSTTCTTCTHH-HHHHHHHTCTT
T ss_pred HHHH-----------HHHHhCCCcEEEEcCCCCCCChHH-HHHHHHHHhhC
Confidence 4555 888999999999986532 2332 33456666655
No 345
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.36 E-value=0.18 Score=56.00 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=55.4
Q ss_pred CeEEEEcCCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhh---HHHhhh
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMNDT-GTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QID---IERMKL 161 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~~~-~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d---~~~~~~ 161 (397)
-+++|++||.||.+.-+... +- -.|+|+|+++.+.+..+.|. .+..++..|...+.... ..| .....+
T Consensus 541 l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 38999999999999877653 22 35889999999999887763 34456666654331000 000 000001
Q ss_pred -cccCccEEEEcCCCCCCC
Q psy17793 162 -QKESFDRILLDAPCSGFG 179 (397)
Q Consensus 162 -~~~~fD~Il~DpPCSg~G 179 (397)
..+.+|+|+.=|||-+..
T Consensus 614 p~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCC
T ss_pred ccCCCeeEEEEcCCCcchh
Confidence 124699999999997754
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.27 E-value=0.11 Score=50.86 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=37.9
Q ss_pred cC-CCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LD-VQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~-~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
++ +++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHH----HcCCcE
Confidence 46 78999999999543 44555666654 2248999999999988765 578754
No 347
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.25 E-value=1.1 Score=40.87 Aligned_cols=89 Identities=15% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPG-NKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG-~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.++|=.|++.| |.+.++|..+ ..+.+|+.++.+....+.+.+..+..+-.++.++..|.++...-. ..+.-..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-- 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE-- 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH--
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH--
Confidence 4678888887743 4666666543 346789999999877777777777766557889999987652100 0000001
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
.-+.+|.++.++-.
T Consensus 84 ~~g~id~li~~Ag~ 97 (266)
T 3oig_A 84 QVGVIHGIAHCIAF 97 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeeEEEEcccc
Confidence 11478999987653
No 348
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.18 E-value=0.19 Score=53.09 Aligned_cols=132 Identities=12% Similarity=0.118 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-----------CCCcEEEEEeC---CHHHHHHHH-----------HHHHHhCC--C--
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-----------NDTGTLIALDK---SKPRVTKLE-----------ETIKKLQL--S-- 136 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-----------~~~~~V~avD~---s~~rl~~l~-----------~n~~~~g~--~-- 136 (397)
.-+|||+|-|+|.-.+...... ...-+++++|. +++-+..+- +.++.+.. .
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3489999999998876655432 11246899999 666665221 22222211 0
Q ss_pred ----------cEEEEEcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHH
Q psy17793 137 ----------SIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKK 206 (397)
Q Consensus 137 ----------~v~~~~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~ 206 (397)
.+++..+|+....... .......||.|++|+- +-.++|+ .|+ .+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~------~~~~~~~~d~~~~D~f--~p~~np~---~w~---------------~~ 200 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQL------DDSLNQKVDAWFLDGF--APAKNPD---MWT---------------QN 200 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGB------CGGGTTCEEEEEECCS--CGGGCGG---GSC---------------HH
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhc------ccccCCcccEEEECCC--CCcCChh---hhh---------------HH
Confidence 1345556665543210 0001357999999984 1112333 344 44
Q ss_pred HHHHHhhhhccccccccccccCCcEEEEEecCCCccccHHHHHHHHHHCCCcEEEe
Q psy17793 207 LLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQ 262 (397)
Q Consensus 207 lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~~~~~l~~ 262 (397)
++.. ..+++++||++..-+|. ..|+..|.+. ++.+..
T Consensus 201 ~~~~-----------l~~~~~~g~~~~t~~~~-------~~vr~~L~~a-Gf~v~~ 237 (676)
T 3ps9_A 201 LFNA-----------MARLARPGGTLATFTSA-------GFVRRGLQDA-GFTMQK 237 (676)
T ss_dssp HHHH-----------HHHHEEEEEEEEESCCC-------HHHHHHHHHH-TCEEEE
T ss_pred HHHH-----------HHHHhCCCCEEEeccCc-------HHHHHHHHhC-CeEEEe
Confidence 5565 77789999987654443 3566666665 455544
No 349
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.15 E-value=0.36 Score=46.24 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=40.0
Q ss_pred ccCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||-.|+| .|..++++|... +.+|+++|.++++++.+++ +|.+.
T Consensus 139 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~ 192 (340)
T 3gms_A 139 TLNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAY 192 (340)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSE
T ss_pred hcccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcE
Confidence 4567899999999887 466677777765 3589999999999887754 67653
No 350
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.00 E-value=1 Score=41.15 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAA-PGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcag-pG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.|.+||=.|+. . +.+.+++..+ ..+.+|+.+|.+...++.+.+.++..+-.++.++..|.++...- ... .....
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v--~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAV--DALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHH--HHHHHHHHH
Confidence 36678877763 3 4555566543 34678999999999999888888777656799999999765210 000 00001
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
.-+.+|.++.++--
T Consensus 98 ~~g~id~li~~Ag~ 111 (266)
T 3o38_A 98 KAGRLDVLVNNAGL 111 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCcEEEECCCc
Confidence 11478999997653
No 351
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.90 E-value=1.6 Score=40.88 Aligned_cols=87 Identities=13% Similarity=0.061 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCCC-hHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhh
Q psy17793 84 QPGQKVLDMCAAPG-NKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMK 160 (397)
Q Consensus 84 ~~g~~VLDlcagpG-~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~ 160 (397)
-.|.++|=.|++.| |.+.++|..+ ..+.+|+.++.++...+.+++..+..+ ++.++..|.++...- ... ....
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v--~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASI--DAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHH--HHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHH--HHHHHHHH
Confidence 35778998888754 5666666544 345689999999877777776666665 578888998765210 000 0000
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
..-+.+|.++.++-
T Consensus 105 ~~~g~iD~lVnnAG 118 (293)
T 3grk_A 105 KKWGKLDFLVHAIG 118 (293)
T ss_dssp HHTSCCSEEEECCC
T ss_pred HhcCCCCEEEECCc
Confidence 11257999998664
No 352
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.83 E-value=0.15 Score=49.16 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=33.6
Q ss_pred CCCeEEEEc-CC-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 85 PGQKVLDMC-AA-PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 85 ~g~~VLDlc-ag-pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
+|++||=.| +| .|..++++|... +.+|+++|.++++++.+++ +|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADI 198 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE
Confidence 899999774 32 255556666654 3599999999999887764 67654
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.77 E-value=0.18 Score=48.52 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=37.6
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 82 DVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 82 ~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.+++|++||-.|+|+ |..++++|..+ +.+|+++|.++++++.++ ++|.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HCCCC
Confidence 678999999999854 55566666654 359999999999988764 46765
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.69 E-value=0.19 Score=48.00 Aligned_cols=50 Identities=26% Similarity=0.353 Sum_probs=34.4
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||-.|++ -|..+.+++.. .+.+|+++|.++++++.+ +++|..
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHH--CCCEEEEEeCCHHHHHHH----HhcCCc
Confidence 467899999999973 33334444443 345899999999888766 345654
No 355
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.54 E-value=0.18 Score=47.81 Aligned_cols=51 Identities=12% Similarity=0.005 Sum_probs=38.3
Q ss_pred ccCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||=.|+|+ |..++++|..++ .+|++++ ++++++.++ ++|.+.
T Consensus 137 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~ 188 (315)
T 3goh_A 137 KIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRH 188 (315)
T ss_dssp TSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCE
Confidence 34678999999999854 666777777653 4999999 998887764 467643
No 356
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.52 E-value=0.44 Score=46.10 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=38.3
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||-.|+|+ |..++++|..+ +.+|+++|.++++++.+++ +|.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCCE
Confidence 4678999999999854 55566677665 3479999999999877653 68654
No 357
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.45 E-value=0.052 Score=52.48 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=41.8
Q ss_pred EEEE-EcccccccccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhc
Q psy17793 138 IQTH-VYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVS 216 (397)
Q Consensus 138 v~~~-~~D~~~~~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~ 216 (397)
..++ ++|+...+.. +..++||+|++|||+... . ..|. ....+...-...|..
T Consensus 39 ~~l~i~gD~l~~L~~---------l~~~svDlI~tDPPY~~~-~-----d~~~------~~~~~~~~~~~~l~~------ 91 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK---------LPDDSVQLIICDPPYNIM-L-----ADWD------DHMDYIGWAKRWLAE------ 91 (319)
T ss_dssp EEEEEECCHHHHHHT---------SCTTCEEEEEECCCSBCC-G-----GGGG------TCSSHHHHHHHHHHH------
T ss_pred ceEEECCcHHHHHHh---------CccCCcCEEEECCCCCCC-C-----CCcc------CHHHHHHHHHHHHHH------
Confidence 5677 9998775421 345689999999998432 0 0111 001111122556666
Q ss_pred cccccccccccCCcEEEEEe
Q psy17793 217 LFDWQGIPLLKKDGILVYCT 236 (397)
Q Consensus 217 ~~~~~a~~lLkpgG~lvysT 236 (397)
+.++|++||.+++..
T Consensus 92 -----~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 92 -----AERVLSPTGSIAIFG 106 (319)
T ss_dssp -----HHHHEEEEEEEEEEE
T ss_pred -----HHHHcCCCeEEEEEc
Confidence 889999999998763
No 358
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.29 E-value=0.58 Score=40.87 Aligned_cols=50 Identities=22% Similarity=0.303 Sum_probs=33.7
Q ss_pred cCCCCCCeEEEEcCCC--ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAAP--GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcagp--G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||..|++. |..+.+++... +.+|+++|.++++.+.++ ++|..
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 4678999999998542 33344444433 368999999998876654 35654
No 359
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.99 E-value=3 Score=38.31 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS------------KPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.|.+||=.|++ |+.+.++|..+ ..+.+|+.+|.+ ...++.+...++..+ .++.++..|..+...-
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHH
Confidence 46677777755 66777777654 345789999987 778888877777766 3588889998765210
Q ss_pred c-hhhHHHhhhcccCccEEEEcCCC
Q psy17793 152 S-QIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 152 ~-~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
. ..+.... .-+.+|.++.++--
T Consensus 87 ~~~~~~~~~--~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVA--EFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHH--HHSCCCEEEECCCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCCc
Confidence 0 0000001 11478999997753
No 360
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.98 E-value=0.25 Score=47.38 Aligned_cols=52 Identities=23% Similarity=0.277 Sum_probs=36.4
Q ss_pred ccCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 80 YLDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 80 ~L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
..++++|++||-.|| |-|..+.++|... +.+|+++|.++++++.+++ ++|..
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc
Confidence 346789999999987 3344455555543 3589999999998877652 35764
No 361
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.95 E-value=0.2 Score=47.94 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=37.0
Q ss_pred ccCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 80 YLDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 80 ~L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
...+++|++||-.|++ -|..++++|... +.+|+++|.++++++.+. +++|..
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCS
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCC
Confidence 3468899999988873 355555666653 459999999999887762 345764
No 362
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.92 E-value=0.13 Score=49.91 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=34.5
Q ss_pred cCCCCC------CeEEEEcCCC-ChHH-HHHH-HHcCCCcEEEEEeCCHH---HHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPG------QKVLDMCAAP-GNKL-THIA-LLMNDTGTLIALDKSKP---RVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g------~~VLDlcagp-G~kt-~~lA-~~~~~~~~V~avD~s~~---rl~~l~~n~~~~g~~~ 137 (397)
..+++| ++||=.|+|+ |..+ +++| ..+ +..+|+++|.+++ +++.++ ++|.+.
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~ 225 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDATY 225 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTCEE
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCCcc
Confidence 356789 9999999733 3334 4555 433 2234999999988 877664 578643
No 363
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.82 E-value=2.7 Score=38.45 Aligned_cols=87 Identities=7% Similarity=-0.008 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKK-LQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~-~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.++..++.+.+.++. .+-.++.++..|.++...-. ..+.-..
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-- 83 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER-- 83 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH--
Confidence 35677777755 66777777644 3456899999999999988888776 55445888899987652100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 84 ~~g~id~lvnnAg 96 (265)
T 3lf2_A 84 TLGCASILVNNAG 96 (265)
T ss_dssp HHCSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1257899998764
No 364
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=91.79 E-value=0.11 Score=46.07 Aligned_cols=34 Identities=35% Similarity=0.653 Sum_probs=30.0
Q ss_pred CCeEEEechhhhhhhhcccceecccccccCCCCC
Q psy17793 344 HPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKN 377 (397)
Q Consensus 344 ~~~~v~vd~~c~~a~LrGa~v~~pg~~~~~~~~~ 377 (397)
.+..|.||..+..|+++||++++|||+++..++.
T Consensus 93 ~~~~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~ 126 (179)
T 3d79_A 93 WPRRVVVDEGAVPHILNGADVMAPGIVDADEGIK 126 (179)
T ss_dssp STTEEEECGGGHHHHHTTCCEEGGGEEEECTTCC
T ss_pred cCCEEEECccHHHHHhCCCCcCCCcEEEccCCcc
Confidence 3468999999999999999999999999987654
No 365
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.74 E-value=0.34 Score=52.14 Aligned_cols=44 Identities=20% Similarity=0.133 Sum_probs=33.7
Q ss_pred CeEEEEcCCCChHHHHHHHHcC--C--CcEEEEEeCCHHHHHHHHHHH
Q psy17793 87 QKVLDMCAAPGNKLTHIALLMN--D--TGTLIALDKSKPRVTKLEETI 130 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~~--~--~~~V~avD~s~~rl~~l~~n~ 130 (397)
-+|||++||.||.++-+..... + --.++|+|+++.+++..+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4799999999999876655310 0 125799999999999988773
No 366
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=91.71 E-value=0.11 Score=44.49 Aligned_cols=35 Identities=29% Similarity=0.500 Sum_probs=30.6
Q ss_pred CCeEEEechhhhhhhhcccceecccccccCCCCCC
Q psy17793 344 HPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKNS 378 (397)
Q Consensus 344 ~~~~v~vd~~c~~a~LrGa~v~~pg~~~~~~~~~~ 378 (397)
....|.||..+..++++|+++++|||++++.++..
T Consensus 69 ~~~~v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~ 103 (153)
T 1q7h_A 69 SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRK 103 (153)
T ss_dssp SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCT
T ss_pred cCCEEEECHhHHHHHHcCCCcCccccCcccCceeC
Confidence 44688999999999999999999999999876543
No 367
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.66 E-value=0.8 Score=43.11 Aligned_cols=87 Identities=11% Similarity=0.092 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|.+||=.| |+|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+..++.++..|.++...- ... ......
T Consensus 40 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v--~~~~~~~~~~ 116 (293)
T 3rih_A 40 SARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSC--ADAARTVVDA 116 (293)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH--HHHHHHHHHH
Confidence 456677655 4577777777654 34568999999999988888877776655788899999765210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 117 ~g~iD~lvnnAg 128 (293)
T 3rih_A 117 FGALDVVCANAG 128 (293)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998764
No 368
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.61 E-value=0.35 Score=46.51 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=35.4
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
+++++|++||-.|++ .|..+.+++... +.+|+++|.++++++.++ ++|..
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~----~~g~~ 216 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFR----SIGGE 216 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHH----HcCCc
Confidence 367899999999973 344455555543 458999999998876654 45764
No 369
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.55 E-value=1.5 Score=40.11 Aligned_cols=84 Identities=8% Similarity=0.122 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.+|.+++.++.+.+.+ + .++.++..|..+...-. ..+.... .
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 79 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQ--T 79 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHH--H
Confidence 46778877755 66777777654 34568999999998887766544 3 35788889987652100 0000001 1
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++-.
T Consensus 80 ~g~id~lv~nAg~ 92 (255)
T 4eso_A 80 LGAIDLLHINAGV 92 (255)
T ss_dssp HSSEEEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 2578999987643
No 370
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.37 E-value=0.28 Score=47.69 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=38.0
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||-.|+ +.|..++++|... +.+|+++|.++++++.+++ +|.+.
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~ 211 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDR 211 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSE
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcE
Confidence 46789999999984 4466666777764 3589999999998877654 67653
No 371
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.33 E-value=0.22 Score=48.02 Aligned_cols=52 Identities=19% Similarity=0.180 Sum_probs=37.9
Q ss_pred ccCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||=.|| |.|..++++|..+ +.+|++++.++++++.+++ +|.+.
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~ 207 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADI 207 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE
Confidence 345789999998886 3355666666664 3589999999998876654 67654
No 372
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.31 E-value=1.5 Score=40.08 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+..+|=.|++ |+.+.++|..+ ..+.+|+.+|.++.+++.+.+.++..| .++.++..|.++...- ... ......
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v--~~~~~~~~~~ 81 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEV--TAFLNAADAH 81 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHH--HHHHHHHHhh
Confidence 35677766655 66777777654 345689999999999999988888876 3688899998765210 000 001112
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
+.+|.++.++-.
T Consensus 82 -g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 -APLEVTIFNVGA 93 (252)
T ss_dssp -SCEEEEEECCCC
T ss_pred -CCceEEEECCCc
Confidence 578999987643
No 373
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.23 E-value=0.94 Score=43.44 Aligned_cols=51 Identities=22% Similarity=0.120 Sum_probs=36.1
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++ +|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~----~~Ga~~ 215 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAK----KVGADY 215 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHH----HHTCSE
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE
Confidence 456 899999999843 44555666654 2237999999999887765 467653
No 374
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.21 E-value=1 Score=44.22 Aligned_cols=51 Identities=20% Similarity=0.279 Sum_probs=37.8
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.+++|++||=.|||+ |..++++|..+ +..+|+++|.++++++.++ ++|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999998754 55566666654 3348999999999988765 568653
No 375
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.16 E-value=1.9 Score=40.43 Aligned_cols=87 Identities=11% Similarity=0.115 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
-.|..||=.|++ |+.+.++|..+ ..+.+|+.++.++..++.+.+.++..+. ++.++..|.++...- ... .....
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v--~~~~~~~~~ 104 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEM--VRLADEAFR 104 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH--HHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH--HHHHHHHHH
Confidence 356788877765 66777777654 3456899999999999998888887764 578888998765210 000 00000
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
..+.+|.++.++-
T Consensus 105 ~~g~id~lvnnAg 117 (301)
T 3tjr_A 105 LLGGVDVVFSNAG 117 (301)
T ss_dssp HHSSCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 1147999999764
No 376
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.11 E-value=0.45 Score=54.26 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccch-hhH---HHhh
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDT-GTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQ-IDI---ERMK 160 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~-~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~-~d~---~~~~ 160 (397)
.-++||++||.||.+.-+-.. +- -.|+|+|+++.+++..+.|. .+..++..|...+..... .|. ....
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 348999999999999866552 22 35899999999999888773 334556666543310000 000 0000
Q ss_pred hc-ccCccEEEEcCCCCCCC
Q psy17793 161 LQ-KESFDRILLDAPCSGFG 179 (397)
Q Consensus 161 ~~-~~~fD~Il~DpPCSg~G 179 (397)
++ .+.+|+|+.=|||-+..
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFS 943 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTC
T ss_pred ccccCccceEEecCCCcccc
Confidence 11 24689999999997754
No 377
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.97 E-value=2.3 Score=39.77 Aligned_cols=86 Identities=13% Similarity=0.046 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAP-GNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagp-G~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.++|=.|++. .+.+.++|..+ ..+.+|+.+|.++...+.+.+..+..+ .+.++..|.++...-. ..+.-...+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 477888888764 46777777644 346789999999877777777777665 3577888987652100 000000111
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 107 --g~iD~lVnnAG 117 (296)
T 3k31_A 107 --GSLDFVVHAVA 117 (296)
T ss_dssp --SCCSEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 57899998764
No 378
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.96 E-value=0.85 Score=43.31 Aligned_cols=50 Identities=24% Similarity=0.245 Sum_probs=36.3
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||-.|++ -|..+.++|... +.+|+++|.++++++.++ ++|.+
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~Ga~ 187 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAK----ALGAW 187 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 467899999988742 355555666654 358999999999988775 46764
No 379
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.80 E-value=2.3 Score=38.90 Aligned_cols=87 Identities=10% Similarity=0.050 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|.++|=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+-.++.++..|.++...-. ..+.... .
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 85 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE--E 85 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 3667776665 577777777654 345689999999999998888888776557889999987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 86 ~g~id~lvnnAg 97 (262)
T 3pk0_A 86 FGGIDVVCANAG 97 (262)
T ss_dssp HSCCSEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 247999998764
No 380
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.70 E-value=3.7 Score=37.47 Aligned_cols=85 Identities=11% Similarity=0.046 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+ .++.++..|.++...- ... ......
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v--~~~~~~~~~~ 85 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQV--AHLVDETMKA 85 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHH--HHHHHHHHHH
Confidence 46778877765 55666666544 345689999999999999988888776 3588888998765210 000 000011
Q ss_pred ccCccEEEEcC
Q psy17793 163 KESFDRILLDA 173 (397)
Q Consensus 163 ~~~fD~Il~Dp 173 (397)
-+..|.++.++
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 25789999876
No 381
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.62 E-value=0.31 Score=46.92 Aligned_cols=51 Identities=20% Similarity=0.270 Sum_probs=36.4
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
..+++|++||-.|+| .|..+++++.... +.+|+++|.++++++.++ ++|.+
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~----~~g~~ 218 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAK----RAGAD 218 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCC
Confidence 357899999999987 3344555555541 358999999999987764 35754
No 382
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.59 E-value=3.5 Score=37.50 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|..||=.|+ +|+.+.++|..+ ..+.+|+.++.+...++.+.+.+...+ .++.++..|.++...- ... ......
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v--~~~~~~~~~~ 103 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAI--AAFATGVLAA 103 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHH--HHHHHHHHHh
Confidence 4667776665 577888777654 345689999999999999988888776 3588889998765210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+..|.++.++-
T Consensus 104 ~g~id~lv~~Ag 115 (262)
T 3rkr_A 104 HGRCDVLVNNAG 115 (262)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247899998664
No 383
>3r90_A Malignant T cell-amplified sequence 1; structural genomics consortium, surface entropy reduction, S binding protein; 1.70A {Homo sapiens}
Probab=90.11 E-value=0.16 Score=45.34 Aligned_cols=30 Identities=27% Similarity=0.344 Sum_probs=27.4
Q ss_pred CeEEEechhhhhhhhcccceecccccccCC
Q psy17793 345 PVQIIVDQPCALAVLRGADVFAPGVLAMPL 374 (397)
Q Consensus 345 ~~~v~vd~~c~~a~LrGa~v~~pg~~~~~~ 374 (397)
...|.||..+..++++||++++|||+....
T Consensus 92 lp~v~Vd~~av~~v~~GA~Lm~PGv~~~~~ 121 (188)
T 3r90_A 92 LPHQQVDKGAIKFVLSGANIMCPGLTSPGA 121 (188)
T ss_dssp SCEEEECGGGHHHHTTTCCEETHHHHSTTC
T ss_pred CCEEEEChhHHHHhhcCCccccCeEEccCC
Confidence 347899999999999999999999999886
No 384
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.02 E-value=1 Score=43.18 Aligned_cols=51 Identities=29% Similarity=0.384 Sum_probs=38.2
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||-.|+ |.|..++++|... +.+|+++|.++++++.++ ++|.+.
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~----~~ga~~ 214 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAK----ALGADE 214 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 35789999999998 4456666777654 358999999999988775 357653
No 385
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.94 E-value=3.4 Score=37.89 Aligned_cols=86 Identities=14% Similarity=0.061 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.++. +....+.+.+.++..+ .++.++..|.++...-. ..+....
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~-- 92 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVA-- 92 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence 46677766654 66777777654 34567887765 5677788888787776 35788889987652100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 93 ~~g~id~lvnnAg 105 (270)
T 3is3_A 93 HFGHLDIAVSNSG 105 (270)
T ss_dssp HHSCCCEEECCCC
T ss_pred HcCCCCEEEECCC
Confidence 1147899998664
No 386
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.89 E-value=2.1 Score=38.80 Aligned_cols=86 Identities=13% Similarity=0.110 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcC-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMN-DTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~-~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.+.+||=.| |+|+.+.+++..+. .+.+|++++. ++..++.+.+.++..+. ++.++..|..+...- ... .....
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~--~~~~~~~~~ 95 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEV--VALFDKAVS 95 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHH--HHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHH--HHHHHHHHH
Confidence 356777555 56888888887553 4568999998 88888887777777663 578888898764210 000 00000
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+.+|.|+.++-
T Consensus 96 ~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 96 HFGGLDFVMSNSG 108 (274)
T ss_dssp HHSCEEEEECCCC
T ss_pred HcCCCCEEEECCC
Confidence 1146899998664
No 387
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.84 E-value=4.5 Score=37.25 Aligned_cols=86 Identities=10% Similarity=0.002 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.++. +..+.+.+.+.++..|. ++.++..|.++...-. ..+....
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~-- 105 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVE-- 105 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH--
Confidence 46778877765 66777777654 34567888755 56778888777777764 5788889987652100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 106 ~~g~iD~lvnnAg 118 (271)
T 3v2g_A 106 ALGGLDILVNSAG 118 (271)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 1247899998764
No 388
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.72 E-value=4.3 Score=36.36 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
+.++|=.| |+|+.+.+++..+ ..+.+|+.++.++..++.+.+.++..+. ++.++..|..+...- ... .......
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~--~~~~~~~~~~~ 80 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESI--QNFFAEIKAEN 80 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH--HHHHHHHHHTT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHH--HHHHHHHHHHc
Confidence 55677666 5577777777654 3456899999999999999888888764 588888998765210 000 0001122
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 81 ~~id~li~~Ag 91 (247)
T 3lyl_A 81 LAIDILVNNAG 91 (247)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899998764
No 389
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.72 E-value=2.6 Score=38.66 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKK-LQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~-~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.+||=.|+ +|+.+.++|..+ ..+.+|+.++.++..++.+.+.+.. .+ .++.++..|..+...-. ..+.-..
T Consensus 19 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~-- 94 (266)
T 4egf_A 19 DGKRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAE-- 94 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHH--
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH--
Confidence 3667776665 567777777654 3456899999999999888777766 44 46888999987653100 0000001
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
.-+..|.++.++--
T Consensus 95 ~~g~id~lv~nAg~ 108 (266)
T 4egf_A 95 AFGGLDVLVNNAGI 108 (266)
T ss_dssp HHTSCSEEEEECCC
T ss_pred HcCCCCEEEECCCc
Confidence 12478999997743
No 390
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=89.66 E-value=4.2 Score=37.39 Aligned_cols=87 Identities=9% Similarity=0.088 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEEcccccccccc-hhhHHHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLS--SIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~--~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
.|.+||=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+.. ++.++..|.++...-. ..+....
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~- 87 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA- 87 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH-
Confidence 3667777775 567777777654 34578999999999999888888877653 5888889987652100 0000001
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 88 -~~g~id~lv~nAg 100 (281)
T 3svt_A 88 -WHGRLHGVVHCAG 100 (281)
T ss_dssp -HHSCCCEEEECCC
T ss_pred -HcCCCCEEEECCC
Confidence 1257899998764
No 391
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=89.61 E-value=2.7 Score=38.97 Aligned_cols=87 Identities=11% Similarity=0.046 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|..+|=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.+...+-..+.++..|.++...-. ..+.-.. .
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 108 (281)
T 4dry_A 32 EGRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA--E 108 (281)
T ss_dssp --CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 3667776664 577787777654 345789999999999988888777666555688899987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 109 ~g~iD~lvnnAG 120 (281)
T 4dry_A 109 FARLDLLVNNAG 120 (281)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998664
No 392
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.54 E-value=5 Score=36.66 Aligned_cols=86 Identities=17% Similarity=0.122 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+.+||=.| |+|+.+.+++..+ ..+.+|+++|.++..++.+.+.++..+. ++.++..|..+...- ... ......
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v--~~~~~~~~~~ 105 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDI--YSSAKKVKAE 105 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHH--HHHHHHHHHH
Confidence 356777666 5577888888654 3456899999999998888877777663 688888998764210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.|+.++-
T Consensus 106 ~g~iD~li~~Ag 117 (272)
T 1yb1_A 106 IGDVSILVNNAG 117 (272)
T ss_dssp TCCCSEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 247899998764
No 393
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=89.26 E-value=2.9 Score=38.02 Aligned_cols=86 Identities=12% Similarity=0.012 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.+|.+...++.+.+.++..+ .++.++..|..+...-. ..+.-.. .
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 86 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALD--Q 86 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH--H
Confidence 36677766654 66777777644 345689999999999999888888776 35788889987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+..|.++.++-
T Consensus 87 ~g~id~lv~nAg 98 (256)
T 3gaf_A 87 FGKITVLVNNAG 98 (256)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998764
No 394
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.22 E-value=4.5 Score=36.68 Aligned_cols=87 Identities=7% Similarity=0.034 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|.+||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+ .++.++..|.++...-. ..+.....+
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHF- 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 3667776665 577777777654 345689999999998888777776655 35788888987642100 000000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+.+|.++.++-
T Consensus 85 ~g~id~lv~~Ag 96 (260)
T 2ae2_A 85 HGKLNILVNNAG 96 (260)
T ss_dssp TTCCCEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 157899998764
No 395
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.20 E-value=4.2 Score=38.43 Aligned_cols=87 Identities=10% Similarity=0.011 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.+||=.|++ |+.+.+++..+ ..+.+|++++.++..++.+.+.++..+.. ++.++..|.++...-. ..+.- ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~--~~ 83 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV--EA 83 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH--HH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH--HH
Confidence 46678877755 66777777654 34568999999999999998888877643 5888999987642100 00000 00
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 84 ~~g~id~lv~nAg 96 (319)
T 3ioy_A 84 RFGPVSILCNNAG 96 (319)
T ss_dssp HTCCEEEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 1247899999774
No 396
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.13 E-value=4.9 Score=36.22 Aligned_cols=85 Identities=9% Similarity=0.064 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~~ 163 (397)
|..+|=.|+ +|+.+.+++..+ ..+.+|+.++.++..++.+.+.++..+. ++.++..|..+...-. ..+..... -
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~--~ 82 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEA--L 82 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH--H
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH--c
Confidence 567777775 477777777654 3456899999999998888777776653 5788889987642100 00000011 1
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 83 g~id~lv~nAg 93 (247)
T 2jah_A 83 GGLDILVNNAG 93 (247)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 397
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=89.06 E-value=2.5 Score=39.08 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|..+|=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+ .++.++..|..+...- .+. ......
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~--~~~~~~~~~~ 107 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAG--TDLIERAEAI 107 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHH--HHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHH--HHHHHHHHHh
Confidence 3667776664 567777777654 345689999999999888888887766 3588888998765210 000 000111
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 108 -g~iD~lvnnAg 118 (275)
T 4imr_A 108 -APVDILVINAS 118 (275)
T ss_dssp -SCCCEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 57999998764
No 398
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=88.93 E-value=3.9 Score=37.61 Aligned_cols=85 Identities=14% Similarity=0.107 Sum_probs=55.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
+.++|=.|++ |+.+.++|..+ ..+.+|+.++.++.+++.+.+.++..+. ++.++..|.++...- ... ......-
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v--~~~~~~~~~~~ 79 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSV--AAFAQAAVDTW 79 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHH--HHHHHHHHHHH
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHH--HHHHHHHHHHc
Confidence 5566666654 67777777654 3457899999999999998888887763 577888898764210 000 0000112
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+..|.++.++-
T Consensus 80 g~iD~lVnnAG 90 (264)
T 3tfo_A 80 GRIDVLVNNAG 90 (264)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 399
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.85 E-value=4.5 Score=37.65 Aligned_cols=86 Identities=9% Similarity=0.000 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC--HHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS--KPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s--~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~ 160 (397)
.|.++|=.|+ +|+.+.++|..+ ..+.+|+.++.+ ....+.+.+.++..| .++.++..|..+...- ... ....
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v--~~~~~~~~ 123 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFA--RSLVHKAR 123 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHH--HHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHH--HHHHHHHH
Confidence 4667887775 567777777654 345688888886 456677777777776 3578888888764210 000 0000
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
..-+.+|.++.++-
T Consensus 124 ~~~g~iD~lv~nAg 137 (294)
T 3r3s_A 124 EALGGLDILALVAG 137 (294)
T ss_dssp HHHTCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11257899998764
No 400
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.75 E-value=5.6 Score=36.41 Aligned_cols=87 Identities=9% Similarity=0.053 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|..+|=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+. ++.++..|..+...-. ..+.-...+
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~- 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVF- 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3667777775 577777777654 3456899999999988887777766653 5788888987642100 000000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+.+|.++.++-
T Consensus 97 ~g~id~lv~nAg 108 (273)
T 1ae1_A 97 DGKLNILVNNAG 108 (273)
T ss_dssp TSCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 157899998764
No 401
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.69 E-value=2.7 Score=38.90 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.++.++..++.+.+.++..+. ++.++..|.++...-. ..+.-.. .
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~--~ 106 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTG--E 106 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 46777766655 67777777654 3456899999999999988888887764 5778888987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 107 ~g~iD~lvnnAg 118 (276)
T 3r1i_A 107 LGGIDIAVCNAG 118 (276)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147999999764
No 402
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.68 E-value=5.4 Score=36.54 Aligned_cols=86 Identities=19% Similarity=0.173 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-------------CHHHHHHHHHHHHHhCCCcEEEEEcccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-------------SKPRVTKLEETIKKLQLSSIQTHVYDSTRINT 150 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-------------s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~ 150 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|. +...++.+.+.++..+ .++.++..|..+...
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHH
Confidence 46677766655 66677777644 34678999998 6778887777777766 357888899876521
Q ss_pred cc-hhhHHHhhhcccCccEEEEcCC
Q psy17793 151 SS-QIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 151 ~~-~~d~~~~~~~~~~fD~Il~DpP 174 (397)
-. ..+.... .-+..|.++.++-
T Consensus 88 v~~~~~~~~~--~~g~id~lvnnAg 110 (277)
T 3tsc_A 88 LRKVVDDGVA--ALGRLDIIVANAG 110 (277)
T ss_dssp HHHHHHHHHH--HHSCCCEEEECCC
T ss_pred HHHHHHHHHH--HcCCCCEEEECCC
Confidence 00 0000001 1157999998764
No 403
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=88.67 E-value=0.58 Score=43.95 Aligned_cols=70 Identities=17% Similarity=0.167 Sum_probs=46.9
Q ss_pred cCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccCCcEEEEEecCCCccc
Q psy17793 164 ESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEE 243 (397)
Q Consensus 164 ~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkpgG~lvysTCS~~~eE 243 (397)
++||+|++|.. + ..+. .+. +..++-+..-..+-.. |+.+|+|||.++....-+...-
T Consensus 210 grYDlVfvNv~---T----pyR~----HHY-QQCeDHA~~l~mL~~~-----------al~~L~pGGtlv~~aYGyADR~ 266 (324)
T 3trk_A 210 GRYDLVVINIH---T----PFRI----HHY-QQCVDHAMKLQMLGGD-----------SLRLLKPGGSLLIRAYGYADRT 266 (324)
T ss_dssp CCEEEEEEECC---C----CCCS----SHH-HHHHHHHHHHHHHHHH-----------GGGGEEEEEEEEEEECCCCSHH
T ss_pred CceeEEEEecC---C----cccc----chH-HHHHHHHHHHHHHHHH-----------HHhhcCCCceEEEEeecccccc
Confidence 78999999875 0 1111 111 3333333332344455 9999999999999988888888
Q ss_pred cHHHHHHHHHHCC
Q psy17793 244 NEAVIAWILHRHP 256 (397)
Q Consensus 244 nE~vV~~~L~~~~ 256 (397)
.|.+|..+.+++.
T Consensus 267 SE~vV~alARkF~ 279 (324)
T 3trk_A 267 SERVICVLGRKFR 279 (324)
T ss_dssp HHHHHHHHHTTEE
T ss_pred hHHHHHHHHhhhe
Confidence 8889988776653
No 404
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.57 E-value=1.6 Score=41.56 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=35.9
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
..+++|++||-.|++ -|..++++|... +.+|+++|.++++++.++ ++|.+
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAK----EYGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCc
Confidence 367899999998843 344555666654 458999999999988664 46754
No 405
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.57 E-value=0.95 Score=44.40 Aligned_cols=70 Identities=16% Similarity=0.051 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEEEcccccccccchhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS--IQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~--v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.+.+||.++.+-|..|+.++.. .++.+.-|--....++.|++++|++. +.+.. .... .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~-------------~ 97 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLD--STAD-------------Y 97 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSC-------------C
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEecc--cccc-------------c
Confidence 4568999999999999877642 34555446666678899999999875 44322 2111 2
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
...||.|++-.|
T Consensus 98 ~~~~~~v~~~lp 109 (375)
T 4dcm_A 98 PQQPGVVLIKVP 109 (375)
T ss_dssp CSSCSEEEEECC
T ss_pred ccCCCEEEEEcC
Confidence 357999998666
No 406
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=88.53 E-value=4.1 Score=37.52 Aligned_cols=84 Identities=14% Similarity=0.129 Sum_probs=56.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
|.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+..++.++..|.++...- ... .......
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v--~~~~~~~~~~~ 104 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFA--EQFVAQAGKLM 104 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHH--HHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHH--HHHHHHHHHHc
Confidence 66777666 5577888777644 34568999999999998888877777765788889998764210 000 0000011
Q ss_pred cCccEEEEc
Q psy17793 164 ESFDRILLD 172 (397)
Q Consensus 164 ~~fD~Il~D 172 (397)
+.+|.++.+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 479999987
No 407
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.52 E-value=4.1 Score=37.44 Aligned_cols=86 Identities=16% Similarity=0.110 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-------------CHHHHHHHHHHHHHhCCCcEEEEEcccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-------------SKPRVTKLEETIKKLQLSSIQTHVYDSTRINT 150 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-------------s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~ 150 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|. +++.++.+.+.++..+ .++.++..|.++...
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHH
Confidence 46777777765 66777777654 34678999998 7888888887777766 357888889876421
Q ss_pred cchhhH-HHhhhcccCccEEEEcCC
Q psy17793 151 SSQIDI-ERMKLQKESFDRILLDAP 174 (397)
Q Consensus 151 ~~~~d~-~~~~~~~~~fD~Il~DpP 174 (397)
- ... ......-+..|.++.++-
T Consensus 92 v--~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 92 L--RELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp H--HHHHHHHHHHHCCCCEEEECCC
T ss_pred H--HHHHHHHHHHcCCCCEEEECCC
Confidence 0 000 000011247899998764
No 408
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.43 E-value=0.55 Score=44.47 Aligned_cols=45 Identities=16% Similarity=0.139 Sum_probs=32.9
Q ss_pred CCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 86 GQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 86 g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
|+ ||=.|+ +.|..++++|..+ +.+|++++.++++++.+++ +|.+.
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~ 194 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGANR 194 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCSE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE
Confidence 45 887775 3466677777765 3489999999999887754 68764
No 409
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=88.40 E-value=5.2 Score=36.75 Aligned_cols=87 Identities=11% Similarity=0.013 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.++.+...++.+.+.+....-.++.++..|.++...-. ..+.-.. .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 102 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK--E 102 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 46777877754 67777777654 445689999999988887766665432246888899987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 103 ~g~id~lv~nAg 114 (277)
T 4fc7_A 103 FGRIDILINCAA 114 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 157999998764
No 410
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.25 E-value=2.3 Score=40.93 Aligned_cols=50 Identities=16% Similarity=0.063 Sum_probs=35.3
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||-.|++ .|..+.++|... +.+|+++|.++++++.+ +++|..
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~----~~~ga~ 217 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIV----LQNGAH 217 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHH----HHcCCC
Confidence 457899999999973 244445555543 45899999999988755 456764
No 411
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=88.21 E-value=4.1 Score=37.52 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+..+|=.| |+|+.+.++|..+ ..+.+|+.++.++..++.+.+.++..+. ++..+..|..+...-. ..+.... .
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~--~ 102 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLK--E 102 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHH--H
Confidence 366677655 5577777777654 3456899999999999999888888774 4677788887642100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+..|.++.++-
T Consensus 103 ~g~iD~lvnnAg 114 (270)
T 3ftp_A 103 FGALNVLVNNAG 114 (270)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247899998764
No 412
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=88.18 E-value=6.1 Score=36.45 Aligned_cols=86 Identities=7% Similarity=0.018 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKL-QLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~-g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.|.+||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++.. + .++.++.+|..+...- ... .....
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~--~~~~~~~~~ 100 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMV--QNTVSELIK 100 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCHHHH--HHHHHHHHH
Confidence 3567776664 577888887654 34568999999999888777666654 4 3588889998764210 000 00001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
..+.+|.|+.++-
T Consensus 101 ~~g~id~li~~Ag 113 (302)
T 1w6u_A 101 VAGHPNIVINNAA 113 (302)
T ss_dssp HTCSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899998664
No 413
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.09 E-value=6.3 Score=35.15 Aligned_cols=90 Identities=12% Similarity=0.152 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|..+|=.|+ +|+.+.+++..+ ..+.+|+.++.++..++.+.+.++..+..++.++..|............ ......
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 4667776665 577787777654 3456899999999999999998888876667777777632110000000 000011
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++-.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2478999997754
No 414
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=87.98 E-value=6.1 Score=35.69 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEccc--ccccccchhhH-HHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDS--TRINTSSQIDI-ERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~--~~~~~~~~~d~-~~~~ 160 (397)
.|..+|=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.+...+...+.++..|. .+... .... ....
T Consensus 11 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~~~~~~~ 87 (252)
T 3f1l_A 11 NDRIILVTGA-SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSEN--CQQLAQRIA 87 (252)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHH--HHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHH--HHHHHHHHH
Confidence 4667776665 466777777654 34578999999999999888888776655678888888 43210 0000 0001
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
..-+..|.++.++-
T Consensus 88 ~~~g~id~lv~nAg 101 (252)
T 3f1l_A 88 VNYPRLDGVLHNAG 101 (252)
T ss_dssp HHCSCCSEEEECCC
T ss_pred HhCCCCCEEEECCc
Confidence 11257899998764
No 415
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=87.95 E-value=5.5 Score=35.97 Aligned_cols=85 Identities=16% Similarity=0.101 Sum_probs=54.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
+..+|=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+ .++.++..|..+...- ... ......-
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v--~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQV--FAAVEQARKTL 77 (256)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHH--HHHHHHHHHHT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHH--HHHHHHHHHHh
Confidence 34566555 5577787777654 345689999999998888877777665 3578888898764210 000 0000012
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 78 g~id~lv~nAg 88 (256)
T 1geg_A 78 GGFDVIVNNAG 88 (256)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998764
No 416
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.92 E-value=6 Score=36.06 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEEcccccccccchhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQL-SSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~-~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.|.++|=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.+...+. ..+..+..|..+.. +.......
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-----~~~~~~~~ 82 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQ-----GCQDVIEK 82 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHH-----HHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHH-----HHHHHHHh
Confidence 3667776665 577777777654 3457899999999999888877776643 34777888886542 10111111
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+..|.++.++-
T Consensus 83 ~g~id~lv~nAg 94 (267)
T 3t4x_A 83 YPKVDILINNLG 94 (267)
T ss_dssp CCCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998764
No 417
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.85 E-value=5.4 Score=37.23 Aligned_cols=87 Identities=16% Similarity=0.217 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEEcccccccccc-hhhHHHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLS--SIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~--~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
.+..+|=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.+...+.. ++.++..|..+...-. ..+.....
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 356677655 5577787777654 34568999999999988887777766542 5888889987642100 00000011
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
+ +.+|.++.++-
T Consensus 104 ~--g~iD~lvnnAG 115 (297)
T 1xhl_A 104 F--GKIDILVNNAG 115 (297)
T ss_dssp H--SCCCEEEECCC
T ss_pred c--CCCCEEEECCC
Confidence 1 47899998764
No 418
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.79 E-value=4.2 Score=37.72 Aligned_cols=87 Identities=16% Similarity=0.090 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+..+|=.|++ |+.+.++|..+ ..+.+|+.+|.+...++.+.+.+...+ .++.++..|..+...-. ..+.... .
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 102 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVL--K 102 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH--H
Confidence 46677777755 66777777644 345789999999999888887776655 35788889987642100 0000001 1
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++--
T Consensus 103 ~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 103 FGHLDIVVANAGI 115 (283)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 2579999987643
No 419
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.75 E-value=4.7 Score=36.10 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ 162 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~ 162 (397)
.++.+||=.|+ +|+.+.++|..+ ..+.+|+.++.++..++.+.+.+. .++.+...|..+... ....-..
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~-----~~~~~~~ 81 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEE-----CSNLISK 81 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHH-----HHHHHHT
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHH-----HHHHHHh
Confidence 35677786665 577777777654 345689999999988877665442 357888888875421 0001111
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
.+.+|.++.++-.
T Consensus 82 ~~~id~li~~Ag~ 94 (249)
T 3f9i_A 82 TSNLDILVCNAGI 94 (249)
T ss_dssp CSCCSEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 2468999987753
No 420
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.72 E-value=10 Score=35.08 Aligned_cols=86 Identities=8% Similarity=0.032 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHH-HHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKP-RVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~-rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.+||=.|++ |+.+.++|..+ ..+.+|+.++.+.. ..+.+.+.++..+ .++.++..|..+...-. ..+....
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~-- 121 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVR-- 121 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH--
Confidence 46778877755 66777777654 34568999998865 4555555556555 35888899987642100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 122 ~~g~iD~lvnnAg 134 (291)
T 3ijr_A 122 QLGSLNILVNNVA 134 (291)
T ss_dssp HHSSCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899998763
No 421
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=87.56 E-value=5.3 Score=35.93 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=54.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
+.+||=.| |+|+.+.+++..+ ..+.+|++++. ++..++.+.+.++..+ .++.++..|..+...- ... ......
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~ 82 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDV--INLVQSAIKE 82 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHH--HHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHH--HHHHHHHHHH
Confidence 56677555 5577888887654 34568999999 8888887777777665 3578888898764210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.|+.++-
T Consensus 83 ~g~id~li~~Ag 94 (261)
T 1gee_A 83 FGKLDVMINNAG 94 (261)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 146899998664
No 422
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.51 E-value=7 Score=35.60 Aligned_cols=86 Identities=9% Similarity=0.041 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcC-CCcEEEEEeCC---HHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMN-DTGTLIALDKS---KPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERM 159 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~-~~~~V~avD~s---~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~ 159 (397)
.|.++|=.|++ |+.+.++|..+. .+.+|+.++.+ .++++.+.+.++..| .++.++..|.++...-. ..+.-..
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46678877755 667877887653 45678887664 455666666665555 35888889987652100 0000001
Q ss_pred hhcccCccEEEEcCC
Q psy17793 160 KLQKESFDRILLDAP 174 (397)
Q Consensus 160 ~~~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 88 --~~g~iD~lvnnAg 100 (262)
T 3ksu_A 88 --EFGKVDIAINTVG 100 (262)
T ss_dssp --HHCSEEEEEECCC
T ss_pred --HcCCCCEEEECCC
Confidence 1147899998664
No 423
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.49 E-value=2.8 Score=39.68 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=36.0
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||-.|+ |-|..+.+++... +.+|+++|.++++++.+++ +|.+
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~ 192 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH 192 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 45789999998885 3445555566553 4589999999988887754 5654
No 424
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.48 E-value=4.6 Score=36.56 Aligned_cols=87 Identities=15% Similarity=0.097 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEEcccccccccc-hhhHHHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKL--QLSSIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~--g~~~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
.+..+|=.|++ |+.+.++|..+ ..+.+|+.++.++..++.+.+.+... +..++.++..|.++...-. ..+....
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~- 83 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ- 83 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH-
Confidence 35667766655 66777777654 23568999999999999988888776 3356788889987652100 0000001
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 84 -~~g~iD~lvnnAg 96 (250)
T 3nyw_A 84 -KYGAVDILVNAAA 96 (250)
T ss_dssp -HHCCEEEEEECCC
T ss_pred -hcCCCCEEEECCC
Confidence 1247899998664
No 425
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=87.45 E-value=7.5 Score=34.37 Aligned_cols=85 Identities=14% Similarity=0.046 Sum_probs=54.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIK-KLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~-~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
+.++|=.|+ +|+.+.+++..+ ..+.+|+.++.+..+++.+.+.+. ..+ .++.++..|.++...-. ..+.-.. .
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~--~ 77 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLE--R 77 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHH--H
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHH--h
Confidence 455665664 577777777655 345689999999999988877775 444 46888889987652100 0000000 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 78 ~g~id~li~~Ag 89 (235)
T 3l77_A 78 FGDVDVVVANAG 89 (235)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 147899998764
No 426
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.39 E-value=8.1 Score=34.57 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+ .++.++..|..+...- ... ......
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~ 87 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESV--QNAVRSVHEQ 87 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHH--HHHHHHHHHH
Confidence 356777666 5577888888754 345689999999998887777777665 3588888998764210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+.+|.|+.++-
T Consensus 88 ~~~id~vi~~Ag 99 (260)
T 3awd_A 88 EGRVDILVACAG 99 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 146899998664
No 427
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=87.37 E-value=0.55 Score=47.08 Aligned_cols=51 Identities=20% Similarity=0.168 Sum_probs=37.7
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||=.|| +-|..++++|..+ +.+|++++.++++++.++ ++|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH----hhCCcE
Confidence 46789999998886 2355666777764 468899999999988774 468754
No 428
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=87.34 E-value=4.7 Score=36.59 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~~ 163 (397)
|.++|=.| |+|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+ .++.++..|.++...-. ..+.-.. .-
T Consensus 6 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 81 (257)
T 3imf_A 6 EKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDE--KF 81 (257)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 56677656 4577777777654 345689999999999988887776555 35888889987642100 0000001 11
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+..|.++.++-
T Consensus 82 g~id~lv~nAg 92 (257)
T 3imf_A 82 GRIDILINNAA 92 (257)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 429
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=87.22 E-value=3.8 Score=37.72 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|..+|=.| |+|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..|. ++.++..|.++...- ... ......
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v--~~~~~~~~~~ 100 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEI--IEAFARLDEQ 100 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHH--HHHHHHHHHH
Confidence 366777666 5567777777654 3456899999999999988888877763 578888888765210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+..|.++.++-
T Consensus 101 ~g~iD~lv~nAg 112 (271)
T 4ibo_A 101 GIDVDILVNNAG 112 (271)
T ss_dssp TCCCCEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 247899998764
No 430
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.21 E-value=4.4 Score=37.49 Aligned_cols=86 Identities=13% Similarity=0.036 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|+.+|=-|++ +|.+..+|..+ ..+.+|+.+|++++.++.+.+.+++.|. ++..+..|.++...-. ..+.. ...
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~--~~~ 83 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKL--DAE 83 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHH--HHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHH--HHH
Confidence 47777777766 55666666644 3567999999999999999888888874 5778888887642100 00111 112
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-++.|.++.++-
T Consensus 84 ~G~iDiLVNNAG 95 (255)
T 4g81_D 84 GIHVDILINNAG 95 (255)
T ss_dssp TCCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 267899998773
No 431
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.20 E-value=5.8 Score=37.08 Aligned_cols=83 Identities=10% Similarity=0.028 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|+.+|=-|++.| .+..+|..+ ..+.+|+.+|.+++.++.+. +++|- ++..+..|.++...-. ..+.....+
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~---~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~- 101 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIGG-GAVGIQADSANLAELDRLYEKVKAEA- 101 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHCT-TCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHcCC-CeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 4778888887655 566666543 35679999999998877654 44553 4567788887652100 001111122
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
++.|.++.++-
T Consensus 102 -G~iDiLVNNAG 112 (273)
T 4fgs_A 102 -GRIDVLFVNAG 112 (273)
T ss_dssp -SCEEEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 67899998774
No 432
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.19 E-value=0.56 Score=45.28 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=36.0
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..+++|++||-.|++ -|..++++|... +.+|+++|.++++++.+++ +|.+.
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~ 215 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKR 215 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE
Confidence 457899999987432 345555666654 4589999999999887754 67653
No 433
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.10 E-value=8.3 Score=35.84 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS------------KPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.+ +..++.+.+.++..+ .++.++..|.++...-
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHH
Confidence 46777777765 56677677644 346789999987 777877777777776 3688889998765210
Q ss_pred c-hhhHHHhhhcccCccEEEEcCC
Q psy17793 152 S-QIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 152 ~-~~d~~~~~~~~~~fD~Il~DpP 174 (397)
. ..+.... .-+..|.++.++-
T Consensus 105 ~~~~~~~~~--~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVT--QLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHH--HHSCCCEEEECCC
T ss_pred HHHHHHHHH--HhCCCCEEEECCC
Confidence 0 0000001 1257899998764
No 434
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=87.08 E-value=7.2 Score=36.24 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHhC-CCcEEEEEcccccccccchhhH-HH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMNDT----GTLIALDKSKPRVTKLEETIKKLQ-LSSIQTHVYDSTRINTSSQIDI-ER 158 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~~~----~~V~avD~s~~rl~~l~~n~~~~g-~~~v~~~~~D~~~~~~~~~~d~-~~ 158 (397)
.|.++|=.|++ |+.+..+|..+... ..|+.++.+...++.+.+.++... -.++.++..|.++...- ... ..
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v--~~~~~~ 108 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKI--KPFIEN 108 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGH--HHHHHT
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHH--HHHHHH
Confidence 36778877754 67777777655222 289999999999998888877653 23588889998765310 000 00
Q ss_pred hhhcccCccEEEEcCC
Q psy17793 159 MKLQKESFDRILLDAP 174 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpP 174 (397)
....-+.+|.++.++-
T Consensus 109 ~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 109 LPQEFKDIDILVNNAG 124 (287)
T ss_dssp SCGGGCSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 0011247899998764
No 435
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=87.06 E-value=6.3 Score=36.22 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHH-HHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPR-VTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~r-l~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|..+|=.|+ +|+.+.+++..+ ..+.+|+.++.+... .+.+.+.++..|. ++.++..|..+...-. ..+.....+
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3566776664 577888787754 345689999988643 5555666666653 5778888887542100 000000111
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 106 --g~iD~lv~~Ag 116 (283)
T 1g0o_A 106 --GKLDIVCSNSG 116 (283)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 47899998664
No 436
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.05 E-value=4.9 Score=36.88 Aligned_cols=86 Identities=12% Similarity=-0.003 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIAL-DKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~av-D~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+ ..+....+.+.+.++..+. ++.++..|.++...-. ..+.-..
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~-- 101 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEE-- 101 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHH--
Confidence 36677766655 66677777644 234577766 5677788888887877763 5788889987652100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 102 ~~g~iD~lvnnAG 114 (267)
T 3u5t_A 102 AFGGVDVLVNNAG 114 (267)
T ss_dssp HHSCEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1147899998764
No 437
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.05 E-value=4.9 Score=36.94 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEEcccccccccc-hhhHHHhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLS--SIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~--~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
.+.++|=.| |+|+.+.++|..+ ..+.+|++++.++..++.+.+.++..+.. ++.++..|..+...-. ..+.....
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 356666666 5577777777654 34568999999999888887777665532 5888889987642100 00000011
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 84 --~g~iD~lv~nAg 95 (280)
T 1xkq_A 84 --FGKIDVLVNNAG 95 (280)
T ss_dssp --HSCCCEEEECCC
T ss_pred --cCCCCEEEECCC
Confidence 147899999774
No 438
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.01 E-value=5.1 Score=36.46 Aligned_cols=85 Identities=13% Similarity=0.077 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIAL-DKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~av-D~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.+ +.+....+.+.+.++..+. ++.++..|.++...-. ..+.....+
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46677766655 66777777654 345678777 7788888888777777663 5778889987652100 000000111
Q ss_pred cccCccEEEEcC
Q psy17793 162 QKESFDRILLDA 173 (397)
Q Consensus 162 ~~~~fD~Il~Dp 173 (397)
+..|.++.++
T Consensus 85 --g~id~lv~nA 94 (259)
T 3edm_A 85 --GEIHGLVHVA 94 (259)
T ss_dssp --CSEEEEEECC
T ss_pred --CCCCEEEECC
Confidence 4789999876
No 439
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.93 E-value=2.2 Score=40.27 Aligned_cols=51 Identities=16% Similarity=0.108 Sum_probs=35.1
Q ss_pred ccCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 80 YLDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 80 ~L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
..++++|++||-.|++ .|..+.+++... +.+|+++|.++++++.+++ +|..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~ 187 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW 187 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 3467899999998853 233444455443 3589999999998877754 5654
No 440
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=86.90 E-value=1.1 Score=43.77 Aligned_cols=50 Identities=24% Similarity=0.293 Sum_probs=38.9
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy17793 81 LDVQPGQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQL 135 (397)
Q Consensus 81 L~~~~g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~ 135 (397)
..+++|++||-.|+|+ |..++++|..+ +..+|+++|.++++++.++ ++|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAK----AQGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTC
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHH----HcCC
Confidence 4678999999999765 66677777765 3348999999999988774 4686
No 441
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=86.90 E-value=6.6 Score=36.52 Aligned_cols=86 Identities=16% Similarity=0.068 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+..||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+. ++.++..|.++...- ... ......
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v--~~~~~~~~~~ 108 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGI--QAMVAQIESE 108 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHH--HHHHHHHHHH
Confidence 3667776665 577777777654 3456899999999988887777776663 477888898764210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 109 ~g~iD~lvnnAg 120 (291)
T 3cxt_A 109 VGIIDILVNNAG 120 (291)
T ss_dssp TCCCCEEEECCC
T ss_pred cCCCcEEEECCC
Confidence 246899998764
No 442
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.85 E-value=0.33 Score=45.67 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=36.4
Q ss_pred CCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 83 VQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 83 ~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
+++|++||-.|+ +.|..+.++|... +.+|+++|.++++++.++ ++|.+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~ 173 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPL----ALGAEE 173 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHH----HTTCSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 789999999997 3355566666654 358999999999887764 467653
No 443
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.85 E-value=8.2 Score=34.35 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+ .++.++..|..+...- ... ......
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~ 85 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQEL--SALADFAISK 85 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHHH--HHHHHHHHHh
Confidence 356677555 5688888888754 445689999999998888877777665 3578888898754210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+.+|.|+..+-
T Consensus 86 ~~~~d~vi~~Ag 97 (255)
T 1fmc_A 86 LGKVDILVNNAG 97 (255)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998664
No 444
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=86.84 E-value=5.5 Score=36.45 Aligned_cols=86 Identities=19% Similarity=0.095 Sum_probs=50.3
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAA-PGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcag-pG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.|.+||=.|++ +|+.+.++|..+ ..+.+|+.++.++..-+.+++..+..+ ++.++..|..+...- ... .....
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v--~~~~~~~~~ 80 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHF--KSLYNSVKK 80 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHH--HHHHHHHHH
Confidence 36788888886 488888888755 345689999998762222332223333 367778888764210 000 00001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 81 ~~g~id~lv~nAg 93 (275)
T 2pd4_A 81 DLGSLDFIVHSVA 93 (275)
T ss_dssp HTSCEEEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 1247899998763
No 445
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.74 E-value=1.3 Score=42.54 Aligned_cols=54 Identities=19% Similarity=0.349 Sum_probs=35.2
Q ss_pred CCCCC-CeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPG-QKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g-~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
++++| ++||=.|+ +.|..++++|..+ +.+|+++..+++.++..++.++++|.+.
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeE
Confidence 67889 99998876 3355666777765 3577777655554333334456788764
No 446
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=86.66 E-value=7 Score=36.80 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS------------KPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.+ ...++.+.+.++..+ .++.++..|..+...-
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHH
Confidence 46677766654 66777777654 346789999886 777777777777766 3588888998764210
Q ss_pred c-hhhHHHhhhcccCccEEEEcCCC
Q psy17793 152 S-QIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 152 ~-~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
. ..+.... .-+.+|+++.++--
T Consensus 123 ~~~~~~~~~--~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALA--EFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHH--HHSCCCEEEECCCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCCC
Confidence 0 0000001 11479999997743
No 447
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=86.64 E-value=8.9 Score=35.07 Aligned_cols=87 Identities=10% Similarity=0.031 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS------------KPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.|.++|=.|++ |+.+.++|..+ ..+.+|+.+|.+ ...++.+.+.++..+ .++.++..|.++...-
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHH
Confidence 46778877755 66777777654 345689999987 677777777777766 3588888998765210
Q ss_pred c-hhhHHHhhhcccCccEEEEcCCC
Q psy17793 152 S-QIDIERMKLQKESFDRILLDAPC 175 (397)
Q Consensus 152 ~-~~d~~~~~~~~~~fD~Il~DpPC 175 (397)
. ..+.... .-+.+|.++.++--
T Consensus 87 ~~~~~~~~~--~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAED--TLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHH--HHTCCCEEEECCCC
T ss_pred HHHHHHHHH--hcCCCCEEEECCCC
Confidence 0 0000001 11479999987743
No 448
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.62 E-value=5.3 Score=36.79 Aligned_cols=86 Identities=7% Similarity=0.001 Sum_probs=56.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~~ 163 (397)
+..+|=.|++ |+.+.++|..+ ..+.+|+.++.++..++.+.+.++..+. ++.++..|.++...-. ..+.... .-
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 99 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVE--RF 99 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 6677777754 66777777644 3457899999999999988888877663 5888889987652100 0000001 12
Q ss_pred cCccEEEEcCCC
Q psy17793 164 ESFDRILLDAPC 175 (397)
Q Consensus 164 ~~fD~Il~DpPC 175 (397)
+..|.++.++--
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 478999987743
No 449
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.61 E-value=5.9 Score=36.43 Aligned_cols=86 Identities=19% Similarity=0.178 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC----------------HHHHHHHHHHHHHhCCCcEEEEEccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS----------------KPRVTKLEETIKKLQLSSIQTHVYDSTR 147 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s----------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~ 147 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.+ .+.++.+.+.++..+ .++.++..|.++
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCCCC
Confidence 46677777765 56677777644 346789999987 777777777666655 358888899876
Q ss_pred ccccc-hhhHHHhhhcccCccEEEEcCC
Q psy17793 148 INTSS-QIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 148 ~~~~~-~~d~~~~~~~~~~fD~Il~DpP 174 (397)
...-. ..+.... .-+..|.++.++-
T Consensus 88 ~~~v~~~~~~~~~--~~g~id~lv~nAg 113 (286)
T 3uve_A 88 YDALKAAVDSGVE--QLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHH--HHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHH--HhCCCCEEEECCc
Confidence 52100 0000001 1147999998764
No 450
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=86.42 E-value=6.5 Score=35.75 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIAL-DKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~av-D~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.+.++|=.| |+|+.+.+++..+ ..+.+|+.+ +.++..++.+.+.++..+. ++.++..|.++...-. ..+....
T Consensus 3 ~~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~-- 78 (258)
T 3oid_A 3 QNKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDE-- 78 (258)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHH--
Confidence 356677656 4577787777655 345577775 8899998888888877663 5888889987652100 0000001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 79 ~~g~id~lv~nAg 91 (258)
T 3oid_A 79 TFGRLDVFVNNAA 91 (258)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899998764
No 451
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.30 E-value=9.5 Score=34.97 Aligned_cols=86 Identities=8% Similarity=0.046 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+..||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+. ++.++..|.++...- ... ......
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v--~~~~~~~~~~ 96 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEI--EALVAAVVER 96 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH--HHHHHHHHHH
Confidence 3567777775 577777777654 3456899999999988888777776663 578888898764210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 97 ~g~iD~lv~~Ag 108 (277)
T 2rhc_B 97 YGPVDVLVNNAG 108 (277)
T ss_dssp TCSCSEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 247899998764
No 452
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=86.30 E-value=11 Score=34.82 Aligned_cols=87 Identities=5% Similarity=-0.001 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEEcccccccccc-hhhHHH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKL----QLSSIQTHVYDSTRINTSS-QIDIER 158 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~----g~~~v~~~~~D~~~~~~~~-~~d~~~ 158 (397)
.+.+||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++.. .-.++.++.+|.++...-. ..+...
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 3567886664 588888888754 34568999999999888887777652 1235888899987642100 000000
Q ss_pred hhhcccCccEEEEcCC
Q psy17793 159 MKLQKESFDRILLDAP 174 (397)
Q Consensus 159 ~~~~~~~fD~Il~DpP 174 (397)
.. -+.+|.|+.++-
T Consensus 96 ~~--~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DT--FGKINFLVNNGG 109 (303)
T ss_dssp HH--HSCCCEEEECCC
T ss_pred HH--cCCCCEEEECCC
Confidence 01 146899998664
No 453
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=86.17 E-value=8.6 Score=35.42 Aligned_cols=87 Identities=9% Similarity=0.001 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhh
Q psy17793 84 QPGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 84 ~~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
..+..+|=.|++ |+.+.++|..+ ..+.+|+.+|. ++..++.+.+.++..+ .++.++..|.++...-. ..+.-..
T Consensus 27 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~- 103 (280)
T 4da9_A 27 KARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAVVA- 103 (280)
T ss_dssp CCCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHHHH-
T ss_pred cCCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH-
Confidence 346677777755 66777777654 34568999995 8888888888787776 35888899988653100 0000001
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
.-+..|.++.++-
T Consensus 104 -~~g~iD~lvnnAg 116 (280)
T 4da9_A 104 -EFGRIDCLVNNAG 116 (280)
T ss_dssp -HHSCCCEEEEECC
T ss_pred -HcCCCCEEEECCC
Confidence 1147899999774
No 454
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.06 E-value=1.5 Score=42.28 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHhCCCc
Q psy17793 86 GQKVLDMCAAP-GNKLTHIALLMNDTGTLIALDKSK---PRVTKLEETIKKLQLSS 137 (397)
Q Consensus 86 g~~VLDlcagp-G~kt~~lA~~~~~~~~V~avD~s~---~rl~~l~~n~~~~g~~~ 137 (397)
|++||-.|+|+ |..++++|..+ +.+|+++|.++ ++++.++ ++|.+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~----~~ga~~ 230 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIE----ETKTNY 230 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHH----HHTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHH----HhCCce
Confidence 99999999832 33344555544 34899999998 7776554 467643
No 455
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=86.00 E-value=3.2 Score=37.28 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhcccC
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKES 165 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~~~~ 165 (397)
|..||=.| |+|+.+.++|..+..++.|++++.++..++.+.+ ..++.++..|..+.......... ...-+.
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~--~~~~~~ 75 (245)
T 3e9n_A 5 KKIAVVTG-ATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDK--LKNLDH 75 (245)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGG--GTTCSC
T ss_pred CCEEEEEc-CCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHH--HHhcCC
Confidence 55666666 5577888888877667899999999988766543 34578888887653110000000 001247
Q ss_pred ccEEEEcCC
Q psy17793 166 FDRILLDAP 174 (397)
Q Consensus 166 fD~Il~DpP 174 (397)
+|.++.++-
T Consensus 76 id~lv~~Ag 84 (245)
T 3e9n_A 76 VDTLVHAAA 84 (245)
T ss_dssp CSEEEECC-
T ss_pred CCEEEECCC
Confidence 899998764
No 456
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.93 E-value=10 Score=34.97 Aligned_cols=86 Identities=14% Similarity=0.027 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHH-------HHHHHHHHHHHhCCCcEEEEEcccccccccchhhH
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKP-------RVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI 156 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~-------rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~ 156 (397)
.+..+|=.|++ |+.+.++|..+ ..+.+|+.++.+.. .++.+.+.++..+. ++.++..|.++...- ...
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v--~~~ 83 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAV--AAA 83 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHH--HHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHH--HHH
Confidence 36677766755 66777777654 44568999999876 46666666666663 588888998765210 000
Q ss_pred -HHhhhcccCccEEEEcCC
Q psy17793 157 -ERMKLQKESFDRILLDAP 174 (397)
Q Consensus 157 -~~~~~~~~~fD~Il~DpP 174 (397)
......-+..|.++.++-
T Consensus 84 ~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp HHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 000011247999998764
No 457
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=85.92 E-value=5.3 Score=36.92 Aligned_cols=87 Identities=10% Similarity=0.079 Sum_probs=55.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
+.++|=.|++ |+.+.++|..+ ..+.+|+.+|. ++..++.+.+.++...-.++.++..|.++...- ... ......
T Consensus 25 ~k~~lVTGas-~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v--~~~~~~~~~~ 101 (281)
T 3v2h_A 25 TKTAVITGST-SGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEI--ADMMAMVADR 101 (281)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHH--HHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHH--HHHHHHHHHH
Confidence 6677777755 66777777654 34568999998 777888777777665445688888998764210 000 000011
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++--
T Consensus 102 ~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 102 FGGADILVNNAGV 114 (281)
T ss_dssp TSSCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2478999987643
No 458
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.84 E-value=0.38 Score=45.75 Aligned_cols=50 Identities=18% Similarity=0.077 Sum_probs=36.4
Q ss_pred CCCCCC-eEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQ-KVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~-~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
++++|+ +||=.|+ +.|..++++|..++ .+|++++.++++++.++ ++|.+.
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 197 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKE 197 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcE
Confidence 567886 8998887 34556667777653 57999999988887764 478754
No 459
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.81 E-value=7.9 Score=35.02 Aligned_cols=84 Identities=14% Similarity=0.066 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.|.++|=.|+ +|+.+.+++..+ ..+.+|+.+|.+...++.+.+.+ + .++.++..|.++...- ... ......
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v--~~~~~~~~~~ 79 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSI--DAAIAATVEH 79 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHH--HHHHHHHHHH
Confidence 4667776664 577777777654 34568999999998877665543 3 3578888898764210 000 000011
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++--
T Consensus 80 ~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 80 AGGLDILVNNAAL 92 (259)
T ss_dssp SSSCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999997643
No 460
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.79 E-value=0.57 Score=45.10 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=31.6
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
..+++|++||=.|++ .|..++++|..+ +..+|++.+ ++.+.+.++ +|.+.
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~-----~ga~~ 189 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK-----DSVTH 189 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG-----GGSSE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH-----cCCcE
Confidence 467899999988874 234444555443 346899988 555554442 67654
No 461
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.79 E-value=8.3 Score=34.52 Aligned_cols=86 Identities=9% Similarity=0.069 Sum_probs=57.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+..||=.|+ +|+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+ .++.++..|.++...- ... ......
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~ 83 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESA--KAMADRTLAE 83 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHH--HHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHH--HHHHHHHHHH
Confidence 3667776665 577777777654 345689999999999999888887766 3578888998765210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 84 ~g~id~li~~Ag 95 (253)
T 3qiv_A 84 FGGIDYLVNNAA 95 (253)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147999998764
No 462
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=85.57 E-value=8.2 Score=34.79 Aligned_cols=87 Identities=8% Similarity=0.015 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+.+||=.| |+|+.+.+++..+ ..+..|++++.++..++.+.+.++..+. ++.++..|..+...-. ..+.-...+
T Consensus 13 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~- 89 (266)
T 1xq1_A 13 KAKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMF- 89 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 356677555 5678888888754 3456899999999988887777776653 5788888887542100 000000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
.+.+|.|+.++-
T Consensus 90 ~~~id~li~~Ag 101 (266)
T 1xq1_A 90 GGKLDILINNLG 101 (266)
T ss_dssp TTCCSEEEEECC
T ss_pred CCCCcEEEECCC
Confidence 156899998663
No 463
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.53 E-value=3.1 Score=39.88 Aligned_cols=50 Identities=20% Similarity=0.206 Sum_probs=34.5
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
.++++|++||-.|++ -|..+++++... +.+|+++|.++++++.++ ++|.+
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~g~~ 209 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAE----KLGAA 209 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCc
Confidence 457899999988753 233444455543 458999999999987763 45754
No 464
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=85.39 E-value=9.7 Score=34.71 Aligned_cols=87 Identities=11% Similarity=0.116 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLS-SIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~-~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.+..||=.| |+|+.+.+++..+ ..+.+|++++.++.+++.+.+.++..+.. ++.++.+|..+...- ... .....
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v--~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI--LSMFSAIRS 107 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHH--HHHHHHHHH
Confidence 356777666 5577888787654 34568999999999998888888777653 478888898764210 000 00000
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
..+.+|.|+.++-
T Consensus 108 ~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 108 QHSGVDICINNAG 120 (279)
T ss_dssp HHCCCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 1146899998653
No 465
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.37 E-value=9 Score=35.29 Aligned_cols=83 Identities=11% Similarity=0.067 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.++..++.+.+.+ + .++.++..|.++...-. ..+.... .
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 100 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G-CGAAACRVDVSDEQQIIAMVDACVA--A 100 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C-SSCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CcceEEEecCCCHHHHHHHHHHHHH--H
Confidence 36677766654 66677777644 34578999999998877665544 4 35778888987652100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+..|.++.++-
T Consensus 101 ~g~iD~lvnnAg 112 (277)
T 3gvc_A 101 FGGVDKLVANAG 112 (277)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247899998664
No 466
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=85.24 E-value=5.3 Score=36.25 Aligned_cols=86 Identities=13% Similarity=0.037 Sum_probs=50.0
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAA-PGNKLTHIALLMN-DTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcag-pG~kt~~lA~~~~-~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.+.++|=.|++ +|+.+.+++..+. .+.+|+.++.++..-+.+++..+..+ .+.++..|.++...-. ..+.....+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36788888886 3788888876542 35689999998752223333223333 3677888887642100 000000111
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 85 --g~iD~lv~~Ag 95 (261)
T 2wyu_A 85 --GGLDYLVHAIA 95 (261)
T ss_dssp --SSEEEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 47899998664
No 467
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.22 E-value=0.63 Score=44.25 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=35.8
Q ss_pred CCCCCC-eEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 82 DVQPGQ-KVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 82 ~~~~g~-~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
++++|+ +||=.|| +-|..++++|..++ .+|++++.++++++.++ ++|.+.
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 198 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLK----QLGASE 198 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHH----HHTCSE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcE
Confidence 567786 8999887 33555667777653 57999999988887664 468654
No 468
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.21 E-value=0.9 Score=43.58 Aligned_cols=50 Identities=24% Similarity=0.234 Sum_probs=35.3
Q ss_pred ccCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 80 YLDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 80 ~L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
...+++|++||=.||+ .|..++++|... +.+|+++ .++++++.+ +++|.+
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~----~~lGa~ 196 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYV----RDLGAT 196 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHH----HHHTSE
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHH----HHcCCC
Confidence 3457899999999853 355566667654 3589999 888887665 446764
No 469
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.19 E-value=4.8 Score=36.79 Aligned_cols=83 Identities=13% Similarity=0.089 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+..+|=.|+ +|+.+.+++..+ ..+.+|+.++.++..++.+.+. ++ .++.++..|.++...-. ..+.....
T Consensus 5 ~~k~vlITGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~v~~~~~~~~~~-- 77 (263)
T 2a4k_A 5 SGKTILVTGA-ASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LE-AEAIAVVADVSDPKAVEAVFAEALEE-- 77 (263)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CC-SSEEEEECCTTSHHHHHHHHHHHHHH--
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hc-CceEEEEcCCCCHHHHHHHHHHHHHH--
Confidence 3567776665 577777777654 3456899999998877655443 33 45788889987642100 00000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 78 ~g~iD~lvnnAg 89 (263)
T 2a4k_A 78 FGRLHGVAHFAG 89 (263)
T ss_dssp HSCCCEEEEGGG
T ss_pred cCCCcEEEECCC
Confidence 146899998764
No 470
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=85.10 E-value=4 Score=36.74 Aligned_cols=62 Identities=10% Similarity=0.017 Sum_probs=40.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEEcccccc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQL------SSIQTHVYDSTRI 148 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~------~~v~~~~~D~~~~ 148 (397)
+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..+. .++.++..|..+.
T Consensus 7 ~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 7 SALALVTG-AGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence 56677555 4577888887654 3456899999999888776665544431 3577888888764
No 471
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=85.01 E-value=4.3 Score=37.40 Aligned_cols=85 Identities=9% Similarity=0.034 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
.+..||=.|+ +|+.+.+++..+ ..+.+|+++|.++..++.+.+.++..+ ++.++..|.++...- ... ......
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v--~~~~~~~~~~ 102 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGA--RRLAQALGEL 102 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHH--HHHHHHHHHh
Confidence 3667776665 577777777654 345689999999988877766665444 677888888764210 000 000011
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 103 ~g~iD~lvnnAg 114 (276)
T 2b4q_A 103 SARLDILVNNAG 114 (276)
T ss_dssp CSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247899998764
No 472
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.01 E-value=7.5 Score=35.25 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+.++|=.|+ +|+.+.+++..+ ..+.+|+.++.++..++.+.+.++..|. ++.++..|..+...-. ..+.....+
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDF- 82 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 3667776665 577787777654 3456899999999988887777766553 5788888987642100 000000111
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 83 -g~id~lv~nAg 93 (262)
T 1zem_A 83 -GKIDFLFNNAG 93 (262)
T ss_dssp -SCCCEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 47899998764
No 473
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=85.00 E-value=9.9 Score=34.89 Aligned_cols=86 Identities=15% Similarity=0.048 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAP-GNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagp-G~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.|.+||=.|+++ |+.+.+++..+ ..+.+|+.++.++..-+.+++..+..+ ++.++..|..+...- ... .....
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v--~~~~~~~~~ 95 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDI--KNLKKFLEE 95 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHH--HHHHHHHHH
Confidence 467888888863 78888888754 345689999998752223333223333 356778888754210 000 00001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
.-+.+|.++.++-
T Consensus 96 ~~g~iD~lv~~Ag 108 (285)
T 2p91_A 96 NWGSLDIIVHSIA 108 (285)
T ss_dssp HTSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899998764
No 474
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.91 E-value=11 Score=34.14 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=54.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKL-QLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~-g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
+.+||=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.++.. + .++.++..|.++...-. ..+.... .
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~--~ 82 (263)
T 3ai3_A 7 GKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVATPEGVDAVVESVRS--S 82 (263)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSHHHHHHHHHHHHH--H
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 567776664 577787777654 34568999999998888777666554 5 35788888987642100 0000000 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 83 ~g~id~lv~~Ag 94 (263)
T 3ai3_A 83 FGGADILVNNAG 94 (263)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998764
No 475
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.91 E-value=11 Score=34.45 Aligned_cols=86 Identities=10% Similarity=0.099 Sum_probs=54.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETI-KKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~-~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.+..+|=.|+ +|+.+.+++..+ ..+.+|++++.++..++.+.+.+ +..+. ++.++..|.++...-. ..+.....
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~- 96 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEK- 96 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 3567776665 577787777654 34568999999999888777666 44453 5778888987642100 00000011
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 97 -~g~iD~lvnnAg 108 (267)
T 1vl8_A 97 -FGKLDTVVNAAG 108 (267)
T ss_dssp -HSCCCEEEECCC
T ss_pred -cCCCCEEEECCC
Confidence 147899998764
No 476
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.85 E-value=6.4 Score=35.53 Aligned_cols=87 Identities=13% Similarity=0.031 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCC-CChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhh
Q psy17793 84 QPGQKVLDMCAA-PGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMK 160 (397)
Q Consensus 84 ~~g~~VLDlcag-pG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~ 160 (397)
..+.+||=.|++ +|+.+.++|..+ ..+.+|+.++.+....+.+++..+..+ .+.++..|.++...- ... ....
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v--~~~~~~~~ 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQI--DALFASLK 87 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHH--HHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHH--HHHHHHHH
Confidence 457789988874 477787777654 345689999998766666666666655 367888898765210 000 0000
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
..-+..|.++.++-
T Consensus 88 ~~~g~id~lv~nAg 101 (271)
T 3ek2_A 88 THWDSLDGLVHSIG 101 (271)
T ss_dssp HHCSCEEEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 11247899998764
No 477
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=84.82 E-value=0.83 Score=43.35 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=22.9
Q ss_pred ccccccCCcEEEEEecCCCccccHHHHHHHHHHC
Q psy17793 222 GIPLLKKDGILVYCTCSLSVEENEAVIAWILHRH 255 (397)
Q Consensus 222 a~~lLkpgG~lvysTCS~~~eEnE~vV~~~L~~~ 255 (397)
|.++|+|||.+|.-.-.....+.|+++..+.+.+
T Consensus 240 A~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 240 ACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp HGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred HHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 9999999999998754433224565665555443
No 478
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=84.80 E-value=10 Score=34.71 Aligned_cols=87 Identities=11% Similarity=-0.044 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.|..||=.|+ +|+.+.++|..+ ..+.+|+.++. +....+.+.+.++..+. ++.++..|..+...-. ..+.-..
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~-- 102 (269)
T 4dmm_A 27 TDRIALVTGA-SRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIE-- 102 (269)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH--
Confidence 3667776665 467777777654 34568888888 78888888888877764 5788889987652100 0000001
Q ss_pred cccCccEEEEcCCC
Q psy17793 162 QKESFDRILLDAPC 175 (397)
Q Consensus 162 ~~~~fD~Il~DpPC 175 (397)
.-+..|.++.++--
T Consensus 103 ~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 103 RWGRLDVLVNNAGI 116 (269)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12478999997743
No 479
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=84.74 E-value=13 Score=34.04 Aligned_cols=85 Identities=12% Similarity=0.169 Sum_probs=55.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMN-DTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~-~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
+..||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.+.++..+. ++.++..|.++...- ... .......
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v--~~~~~~~~~~~ 119 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEI--SEVINKILTEH 119 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHH--HHHHHHHHHHC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHH--HHHHHHHHHhc
Confidence 56777666 45888888887654 456899999999888877777766553 578888898764210 000 0000012
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+.+|.|+.++-
T Consensus 120 ~~id~li~~Ag 130 (285)
T 2c07_A 120 KNVDILVNNAG 130 (285)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899998764
No 480
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.72 E-value=8.6 Score=35.06 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEEccccccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKS------------KPRVTKLEETIKKLQLSSIQTHVYDSTRINTS 151 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s------------~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~ 151 (397)
.|..+|=.|+ +|+.+.++|..+ ..+.+|+.+|.+ .+.++.+.+.++..+ .++.++..|.++...-
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHH
Confidence 4667777775 466777777654 346789999987 778887777777776 3688899998765210
Q ss_pred c-hhhHHHhhhcccCccEEEEcCC
Q psy17793 152 S-QIDIERMKLQKESFDRILLDAP 174 (397)
Q Consensus 152 ~-~~d~~~~~~~~~~fD~Il~DpP 174 (397)
. ..+.... .-+..|.++.++-
T Consensus 90 ~~~~~~~~~--~~g~id~lv~nAg 111 (278)
T 3sx2_A 90 SAALQAGLD--ELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHH--HHCCCCEEEECCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCC
Confidence 0 0000001 1147899998764
No 481
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=84.58 E-value=7.8 Score=34.39 Aligned_cols=85 Identities=13% Similarity=0.067 Sum_probs=52.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHcCC-Cc-------EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMND-TG-------TLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI- 156 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~~-~~-------~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~- 156 (397)
+..||=.| |+|+.+.+++..+.. +. .|++++.++..++.+.+.++..+ .++.++..|..+...- ...
T Consensus 2 ~k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v--~~~~ 77 (244)
T 2bd0_A 2 KHILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADV--RRLT 77 (244)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHH--HHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHH--HHHH
Confidence 34566455 568888888775532 33 79999999998888777766544 3578888998764210 000
Q ss_pred HHhhhcccCccEEEEcCC
Q psy17793 157 ERMKLQKESFDRILLDAP 174 (397)
Q Consensus 157 ~~~~~~~~~fD~Il~DpP 174 (397)
.......+.+|.|+.++-
T Consensus 78 ~~~~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 78 THIVERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHHHHTSCCSEEEECCC
T ss_pred HHHHHhCCCCCEEEEcCC
Confidence 000001247899998663
No 482
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.44 E-value=1 Score=43.38 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=34.4
Q ss_pred ccCCCCC--CeEEEEcCC--CChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCC
Q psy17793 80 YLDVQPG--QKVLDMCAA--PGNKLTHIALLMNDTG-TLIALDKSKPRVTKLEETIKKLQLS 136 (397)
Q Consensus 80 ~L~~~~g--~~VLDlcag--pG~kt~~lA~~~~~~~-~V~avD~s~~rl~~l~~n~~~~g~~ 136 (397)
..++++| ++||-.|++ -|..+++++... +. +|+++|.++++++.+++ .+|..
T Consensus 153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~---~~g~~ 209 (357)
T 2zb4_A 153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTS---ELGFD 209 (357)
T ss_dssp HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH---TSCCS
T ss_pred hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHH---HcCCc
Confidence 3467889 999998873 233344444432 34 89999999988776653 25654
No 483
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=84.41 E-value=4 Score=37.27 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CCChHHHHHHHHc-CCCcEEEEEeCCHHH-HHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhh
Q psy17793 85 PGQKVLDMCA-APGNKLTHIALLM-NDTGTLIALDKSKPR-VTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 85 ~g~~VLDlca-gpG~kt~~lA~~~-~~~~~V~avD~s~~r-l~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
.|.++|=.|+ |+|+.+.+++..+ ..+.+|+.+|.++.. ++.+. +.++ .++.++..|.++...-. ..+.....
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DRLP-AKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TTSS-SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---HhcC-CCceEEEccCCCHHHHHHHHHHHHHH
Confidence 4678888888 4888888888755 345689999998765 33332 2233 24667788887642100 00000001
Q ss_pred hc-ccCccEEEEcCC
Q psy17793 161 LQ-KESFDRILLDAP 174 (397)
Q Consensus 161 ~~-~~~fD~Il~DpP 174 (397)
+. .+.+|.++.++-
T Consensus 82 ~g~~~~iD~lv~nAg 96 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIG 96 (269)
T ss_dssp HCTTCCEEEEEECCC
T ss_pred hCCCCCceEEEECCc
Confidence 10 017899998663
No 484
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=84.33 E-value=11 Score=33.63 Aligned_cols=86 Identities=17% Similarity=0.054 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
+.++|=.| |+|+.+.++|..+ ..+.+|+.++. ++.+.+.+.+.++..+. ++.++..|.++...-. ..+.... .
T Consensus 4 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~--~ 79 (246)
T 3osu_A 4 TKSALVTG-ASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVS--Q 79 (246)
T ss_dssp SCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH--H
Confidence 45566555 5577788777654 34567888777 67888888888877764 5778888987642100 0000001 1
Q ss_pred ccCccEEEEcCCC
Q psy17793 163 KESFDRILLDAPC 175 (397)
Q Consensus 163 ~~~fD~Il~DpPC 175 (397)
-+.+|.++.++--
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 3osu_A 80 FGSLDVLVNNAGI 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999997753
No 485
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=84.15 E-value=1.6 Score=43.32 Aligned_cols=51 Identities=18% Similarity=0.123 Sum_probs=36.6
Q ss_pred cCCCCCCeEEEEcCC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCAA--PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlcag--pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||=.||+ -|..++++|... +.+|++++.++++++.++ ++|.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 467899999988862 244555666654 468999999999988764 578754
No 486
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.58 E-value=9.6 Score=34.04 Aligned_cols=82 Identities=9% Similarity=-0.076 Sum_probs=51.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
+.++|=.|+ +|+.+.++|..+ ..+.+|+.+|.++.+++.+.+.+ +. ++.++..|.++...- ... .......
T Consensus 3 ~k~vlVTGa-s~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v--~~~~~~~~~~~ 75 (235)
T 3l6e_A 3 LGHIIVTGA-GSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GN-AVIGIVADLAHHEDV--DVAFAAAVEWG 75 (235)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTSHHHH--HHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CceEEECCCCCHHHH--HHHHHHHHHhc
Confidence 456666665 467777777654 34578999999999888776655 21 488888998764210 000 0000112
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+..|.++.++-
T Consensus 76 g~id~lvnnAg 86 (235)
T 3l6e_A 76 GLPELVLHCAG 86 (235)
T ss_dssp CSCSEEEEECC
T ss_pred CCCcEEEECCC
Confidence 47899998764
No 487
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.52 E-value=3.3 Score=39.02 Aligned_cols=51 Identities=25% Similarity=0.221 Sum_probs=34.0
Q ss_pred ccCCCCCCeEEEEc-CC-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 80 YLDVQPGQKVLDMC-AA-PGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 80 ~L~~~~g~~VLDlc-ag-pG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
...+++|++||=.| +| -|..++++|..+ +.+|++++ ++.+++ .++++|.+.
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~----~~~~lGa~~ 199 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHA----FLKALGAEQ 199 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHH----HHHHHTCSE
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHH----HHHHcCCCE
Confidence 34688999999875 33 355666777765 35888887 555544 345688764
No 488
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=83.47 E-value=11 Score=33.39 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEEcccccccccchhhH-HHhhhc
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKK-LQLSSIQTHVYDSTRINTSSQIDI-ERMKLQ 162 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~-~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~ 162 (397)
+..||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++. .+ .++.++..|..+...- ... ......
T Consensus 7 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~ 82 (248)
T 2pnf_A 7 GKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLSEESI--NKAFEEIYNL 82 (248)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHH--HHHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-CceEEEEccCCCHHHH--HHHHHHHHHh
Confidence 55666555 5688888888754 3456899999999988877776655 45 3578888888754210 000 000001
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.|+.++-
T Consensus 83 ~~~~d~vi~~Ag 94 (248)
T 2pnf_A 83 VDGIDILVNNAG 94 (248)
T ss_dssp SSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998664
No 489
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=83.42 E-value=8.1 Score=35.22 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~ 161 (397)
.|.+||=.|+ +|+.+.++|..+ ..+.+|+.++. +....+.+.+.++..+. ++.++..|..+...- ... .....
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v--~~~~~~~~~ 103 (271)
T 4iin_A 28 TGKNVLITGA-SKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDF--IEAIQTIVQ 103 (271)
T ss_dssp SCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH--HHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH--HHHHHHHHH
Confidence 4667776665 466777777654 34568999988 67777778887877763 578888998764210 000 00001
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
..+.+|.++.++-
T Consensus 104 ~~g~id~li~nAg 116 (271)
T 4iin_A 104 SDGGLSYLVNNAG 116 (271)
T ss_dssp HHSSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1247999998764
No 490
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=83.33 E-value=0.75 Score=41.15 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=31.1
Q ss_pred CCCCeEEEechhhhhhhhcccceecccccccCCCCC
Q psy17793 342 VHHPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKN 377 (397)
Q Consensus 342 ~~~~~~v~vd~~c~~a~LrGa~v~~pg~~~~~~~~~ 377 (397)
.+....|+||..+..|+++|+.+++|||++++.++.
T Consensus 72 L~~~g~VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~ 107 (195)
T 3zv0_C 72 LVGYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIE 107 (195)
T ss_dssp GTTSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCC
T ss_pred hccCCeEEECHHHHHHHhcCCCccCCCcEecCCCcC
Confidence 445668999999999999999999999999987654
No 491
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=82.98 E-value=4.3 Score=37.59 Aligned_cols=86 Identities=12% Similarity=0.104 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.|..+|=.|++ |+.+.++|..+ ..+.+|+.+|.++..++.+.+.++..+ .++.++..|.++...-. ..+.... .
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 82 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVR--R 82 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH--H
Confidence 36677766654 66777777644 345789999999999888877776554 35788888887642100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 83 ~g~iD~lvnnAg 94 (280)
T 3tox_A 83 FGGLDTAFNNAG 94 (280)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147999998764
No 492
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=82.96 E-value=13 Score=32.73 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=52.6
Q ss_pred CeEEEEcCCCChHHHHHHHHc-CCCcEEEE-EeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhH-HHhhhcc
Q psy17793 87 QKVLDMCAAPGNKLTHIALLM-NDTGTLIA-LDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDI-ERMKLQK 163 (397)
Q Consensus 87 ~~VLDlcagpG~kt~~lA~~~-~~~~~V~a-vD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~-~~~~~~~ 163 (397)
.+|| +.-|+|+.+.+++..+ ..+.+|++ .+.++...+.+.+.++..+ .++.++..|.++...- ... ......-
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~~ 77 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADV--EAMMKTAIDAW 77 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHH--HHHHHHHHHHS
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEeCCCCCHHHH--HHHHHHHHHHc
Confidence 3455 4446688888888755 34567888 4889888888877777666 3578888898764210 000 0000012
Q ss_pred cCccEEEEcCC
Q psy17793 164 ESFDRILLDAP 174 (397)
Q Consensus 164 ~~fD~Il~DpP 174 (397)
+.+|.|+.++-
T Consensus 78 g~id~li~~Ag 88 (244)
T 1edo_A 78 GTIDVVVNNAG 88 (244)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998664
No 493
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=82.95 E-value=3.7 Score=39.39 Aligned_cols=55 Identities=18% Similarity=0.274 Sum_probs=34.0
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q psy17793 81 LDVQPGQKVLDMCA--APGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSS 137 (397)
Q Consensus 81 L~~~~g~~VLDlca--gpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~ 137 (397)
.++++|++||=.|+ +.|..++++|..++ ...|..++.++.+-+. .+.++++|.+.
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~-~~~~~~lGa~~ 219 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKL-SDRLKSLGAEH 219 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHH-HHHHHHTTCSE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHH-HHHHHhcCCcE
Confidence 46789999999986 34666777887653 3345555555432211 23456788764
No 494
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=82.86 E-value=11 Score=33.50 Aligned_cols=62 Identities=15% Similarity=0.012 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHcC-CCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLMN-DTGTLIAL-DKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~~-~~~~V~av-D~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
.|..+|=.|++ |+.+.+++..+. .+..|+.+ +.+....+.+.+.++..+ .++.++..|..+.
T Consensus 6 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 69 (255)
T 3icc_A 6 KGKVALVTGAS-RGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESL 69 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-CEEEEEECCTTSH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-CceEEEecCcCCH
Confidence 36677766655 667777776543 34567664 677788887777777766 3577888888765
No 495
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=82.80 E-value=18 Score=32.78 Aligned_cols=86 Identities=12% Similarity=0.023 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeC-CHHHHHHHHHHHHHh-CCCcEEEEEcccccc----cccc-hhhHH
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDK-SKPRVTKLEETIKKL-QLSSIQTHVYDSTRI----NTSS-QIDIE 157 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~-s~~rl~~l~~n~~~~-g~~~v~~~~~D~~~~----~~~~-~~d~~ 157 (397)
|..+|=.| |+|+.+.+++..+ ..+.+|+.++. ++..++.+.+.++.. + .++.++..|..+. ..-. ..+..
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 55677555 5677888888754 34568999999 998888887777665 4 4678888998764 2100 00000
Q ss_pred HhhhcccCccEEEEcCCC
Q psy17793 158 RMKLQKESFDRILLDAPC 175 (397)
Q Consensus 158 ~~~~~~~~fD~Il~DpPC 175 (397)
...+ +.+|.++.++-.
T Consensus 89 ~~~~--g~id~lv~nAg~ 104 (276)
T 1mxh_A 89 FRAF--GRCDVLVNNASA 104 (276)
T ss_dssp HHHH--SCCCEEEECCCC
T ss_pred HHhc--CCCCEEEECCCC
Confidence 0111 478999997743
No 496
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=82.64 E-value=2.7 Score=41.31 Aligned_cols=121 Identities=13% Similarity=0.150 Sum_probs=76.5
Q ss_pred EechhHHHHHhccCCCCCCeEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccc
Q psy17793 69 LQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRI 148 (397)
Q Consensus 69 ~Qd~~S~l~~~~L~~~~g~~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~ 148 (397)
.+|+++.++...+.... .+||++..+-|..++.++ +...++.+.-|...... ++++|++. .. .+...
T Consensus 30 ~~~~~~~~l~~~~~~~~-~~~l~~n~~~g~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~~-~~--~~~~~- 96 (381)
T 3dmg_A 30 YRDPVHDLLQKTVEPFG-ERALDLNPGVGWGSLPLE----GRMAVERLETSRAAFRC----LTASGLQA-RL--ALPWE- 96 (381)
T ss_dssp SSCHHHHHHHTTCCCCS-SEEEESSCTTSTTTGGGB----TTBEEEEEECBHHHHHH----HHHTTCCC-EE--CCGGG-
T ss_pred CCChHHHHHHHHHHHhC-CcEEEecCCCCccccccC----CCCceEEEeCcHHHHHH----HHHcCCCc-cc--cCCcc-
Confidence 37799999988887654 689999999997765443 24678887655555444 67778864 11 11111
Q ss_pred cccchhhHHHhhhcccCccEEEEcCCCCCCCCCcccccccCccchHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Q psy17793 149 NTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKK 228 (397)
Q Consensus 149 ~~~~~~d~~~~~~~~~~fD~Il~DpPCSg~G~~p~~~~~~s~~~~~~~~~~l~~~Q~~lL~~~~~f~~~~~~~a~~lLkp 228 (397)
.....||.|++-.| +.+-..+ . +..|.. +.+.|++
T Consensus 97 ------------~~~~~~d~v~~~~P-------------------k~k~~~~--~-~~~l~~-----------~~~~l~~ 131 (381)
T 3dmg_A 97 ------------AAAGAYDLVVLALP-------------------AGRGTAY--V-QASLVA-----------AARALRM 131 (381)
T ss_dssp ------------SCTTCEEEEEEECC-------------------GGGCHHH--H-HHHHHH-----------HHHHEEE
T ss_pred ------------CCcCCCCEEEEECC-------------------cchhHHH--H-HHHHHH-----------HHHhCCC
Confidence 13467999999777 1111111 1 345566 7788999
Q ss_pred CcEEEEEecCCCccccHHHHHHHHH
Q psy17793 229 DGILVYCTCSLSVEENEAVIAWILH 253 (397)
Q Consensus 229 gG~lvysTCS~~~eEnE~vV~~~L~ 253 (397)
||.|+.. -+|.+.++.+++
T Consensus 132 g~~i~~~------g~~~~g~~~~~~ 150 (381)
T 3dmg_A 132 GGRLYLA------GDKNKGFERYFK 150 (381)
T ss_dssp EEEEEEE------EEGGGTHHHHHH
T ss_pred CCEEEEE------EccHHHHHHHHH
Confidence 9999876 344445555544
No 497
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=82.49 E-value=15 Score=33.80 Aligned_cols=83 Identities=8% Similarity=0.061 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhhc
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKLQ 162 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~~ 162 (397)
.+.++|=.|++ |+.+.++|..+ ..+.+|+.+|.++..++.+.+. .+ ..+.++..|.++...-. ..+.... .
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 98 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IG-SKAFGVRVDVSSAKDAESMVEKTTA--K 98 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HC-TTEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC-CceEEEEecCCCHHHHHHHHHHHHH--H
Confidence 36677766655 66777777654 3456899999998877766544 34 35788888987642100 0000001 1
Q ss_pred ccCccEEEEcCC
Q psy17793 163 KESFDRILLDAP 174 (397)
Q Consensus 163 ~~~fD~Il~DpP 174 (397)
-+.+|.++.++-
T Consensus 99 ~g~iD~lv~nAg 110 (277)
T 4dqx_A 99 WGRVDVLVNNAG 110 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998764
No 498
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=82.47 E-value=13 Score=33.68 Aligned_cols=86 Identities=8% Similarity=-0.030 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHc-CCCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhhh
Q psy17793 85 PGQKVLDMCAAPGNKLTHIALLM-NDTGTLIAL-DKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMKL 161 (397)
Q Consensus 85 ~g~~VLDlcagpG~kt~~lA~~~-~~~~~V~av-D~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~~ 161 (397)
.+..||=.| |+|+.+.++|..+ ..+.+|+.+ +.+++..+.+.+.++..+ .++.++..|..+...-. ..+.-...+
T Consensus 25 ~~k~vlITG-as~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTG-GSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-GEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 355666555 5677787777754 344567665 788888888888887766 36888889987652100 000000111
Q ss_pred cccCccEEEEcCC
Q psy17793 162 QKESFDRILLDAP 174 (397)
Q Consensus 162 ~~~~fD~Il~DpP 174 (397)
+.+|.++.++-
T Consensus 103 --g~id~li~nAg 113 (272)
T 4e3z_A 103 --GRLDGLVNNAG 113 (272)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 47899998764
No 499
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=82.42 E-value=7.8 Score=34.92 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=51.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHcC-CC---cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccc-hhhHHHhh
Q psy17793 86 GQKVLDMCAAPGNKLTHIALLMN-DT---GTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSS-QIDIERMK 160 (397)
Q Consensus 86 g~~VLDlcagpG~kt~~lA~~~~-~~---~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~-~~d~~~~~ 160 (397)
+.+||=.| |+|+.+.+++..+. .+ .+|++++.++...+.+++..+. + .++.++..|..+...-. ..+.-...
T Consensus 21 ~k~vlITG-asggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 21 MNSILITG-CNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H-SNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp CSEEEESC-CSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C-TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C-CceEEEEecCCChHHHHHHHHHHHHh
Confidence 55677666 46888888887653 33 5899999988776655443332 3 36888999987652100 00000011
Q ss_pred hcccCccEEEEcCC
Q psy17793 161 LQKESFDRILLDAP 174 (397)
Q Consensus 161 ~~~~~fD~Il~DpP 174 (397)
+....+|.|+.++-
T Consensus 98 ~g~~~id~li~~Ag 111 (267)
T 1sny_A 98 TKDQGLNVLFNNAG 111 (267)
T ss_dssp HGGGCCSEEEECCC
T ss_pred cCCCCccEEEECCC
Confidence 11116899998664
No 500
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=82.17 E-value=11 Score=32.18 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=48.0
Q ss_pred eEEEEcCCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEEcccccccccchhhHHHhhhc-ccCc
Q psy17793 88 KVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQ-KESF 166 (397)
Q Consensus 88 ~VLDlcagpG~kt~~lA~~~~~~~~V~avD~s~~rl~~l~~n~~~~g~~~v~~~~~D~~~~~~~~~~d~~~~~~~-~~~f 166 (397)
+||=.| |+|+.+.+++..+... +|++++.++..++.+.+.+. . .++..|..+... .. ..+. .+.+
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~-----~~-~~~~~~~~i 67 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A-RALPADLADELE-----AK-ALLEEAGPL 67 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHH-----HH-HHHHHHCSE
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHH-----HH-HHHHhcCCC
Confidence 344444 6788999999988777 99999999988776655432 1 667778765420 00 0011 1478
Q ss_pred cEEEEcCC
Q psy17793 167 DRILLDAP 174 (397)
Q Consensus 167 D~Il~DpP 174 (397)
|.|+..+-
T Consensus 68 d~vi~~ag 75 (207)
T 2yut_A 68 DLLVHAVG 75 (207)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 99998654
Done!