BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17795
(523 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E8O|A Chain A, Core Of The Alu Domain Of The Mammalian Srp
pdb|1E8O|C Chain C, Core Of The Alu Domain Of The Mammalian Srp
pdb|1E8S|A Chain A, Alu Domain Of The Mammalian Srp (Potential Alu
Retroposition Intermediate)
pdb|1RY1|C Chain C, Structure Of The Signal Recognition Particle Interacting
With The Elongation-Arrested Ribosome
Length = 85
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 11 KLKMTDD-NARYSMKYDHKNGYLKLKMTDDNVCLIYKTEMSQDLKKID 57
KL + D AR +KY H +G L +K+TDD VCL+YKT+ +QD+KKI+
Sbjct: 15 KLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIE 62
>pdb|3FOQ|A Chain A, Crystal Structure Of N-Acetylglucosamine-1-Phosphate
Uridyltransferase (Glmu) From Mycobacterium Tuberculosis
In A Cubic Space Group
Length = 503
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 155/413 (37%), Gaps = 86/413 (20%)
Query: 81 SFPGLTQTFVSCGWTTNDTTPGPLKGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVP 140
+FPG T V GP GTR R D+PK L +AG M+ H + A ++
Sbjct: 10 TFPGDTAVLVLAA--------GP--GTRMRS---DTPKVLHTLAGRSMLSHVLHAIAKLA 56
Query: 141 NLKEIIILGYYPSADLQKFVLDMVQEYK------INIRYLQEFWDIIHQQIC--ISLYWT 192
+ I++LG+ D Q+ + +V E I++ H +C +L
Sbjct: 57 PQRLIVVLGH----DHQR-IAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDD 111
Query: 193 WYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSDVVILMHSLYSMAILVTVMATEATRQQSV 252
+ N T G + + +D +I H S A VTV+ T T
Sbjct: 112 YAGNVVVTSG----------DTPLLDADTLAD-LIATHRAVSAA--VTVLTT--TLDDPF 156
Query: 253 YYGCIVRKQQTSEISHYVEK----PSTFVSTLVNCGVYLFSLDIFQNIAAVFQS--KQDE 306
YG I+R Q E+ VE+ PS VN GVY F + ++ + S Q E
Sbjct: 157 GYGRILRTQD-HEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQE 215
Query: 307 FYNGNYMV----NGKDTDFNHI--------------------QLEKEIIMPLAGSGKAYV 342
Y + + +G+ +H+ +L + ++ +G V
Sbjct: 216 LYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVV 275
Query: 343 YQTSKWWSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQC-----KTIGDVYIHSSASV 397
+ W + G R + T+ R Q +C T+ DV + ASV
Sbjct: 276 DPATTWIDVDVTIG------RDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASV 329
Query: 398 HPTAIVGPNVSIDDGAVIGPGVRIKESIILQG-ASIGNHSLVLNSIVGRNSKV 449
T G + SI DGA +GP ++ L +G V NS +G +KV
Sbjct: 330 VRTH--GSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKV 380
>pdb|2QKX|A Chain A, N-Acetyl Glucosamine 1-Phosphate Uridyltransferase From
Mycobacterium Tuberculosis Complex With N-Acetyl
Glucosamine 1-Phosphate
Length = 391
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 155/413 (37%), Gaps = 86/413 (20%)
Query: 81 SFPGLTQTFVSCGWTTNDTTPGPLKGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVP 140
+FPG T V GP GTR R D+PK L +AG M+ H + A ++
Sbjct: 4 TFPGDTAVLVLAA--------GP--GTRMRS---DTPKVLHTLAGRSMLSHVLHAIAKLA 50
Query: 141 NLKEIIILGYYPSADLQKFVLDMVQEYK------INIRYLQEFWDIIHQQIC--ISLYWT 192
+ I++LG+ D Q+ + +V E I++ H +C +L
Sbjct: 51 PQRLIVVLGH----DHQR-IAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDD 105
Query: 193 WYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSDVVILMHSLYSMAILVTVMATEATRQQSV 252
+ N T G + + +D +I H S A VTV+ T T
Sbjct: 106 YAGNVVVTSG----------DTPLLDADTLAD-LIATHRAVSAA--VTVLTT--TLDDPF 150
Query: 253 YYGCIVRKQQTSEISHYVEK----PSTFVSTLVNCGVYLFSLDIFQNIAAVFQS--KQDE 306
YG I+R Q E+ VE+ PS VN GVY F + ++ + S Q E
Sbjct: 151 GYGRILRTQD-HEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQE 209
Query: 307 FYNGNYMV----NGKDTDFNHI--------------------QLEKEIIMPLAGSGKAYV 342
Y + + +G+ +H+ +L + ++ +G V
Sbjct: 210 LYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVV 269
Query: 343 YQTSKWWSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQC-----KTIGDVYIHSSASV 397
+ W + G R + T+ R Q +C T+ DV + ASV
Sbjct: 270 DPATTWIDVDVTIG------RDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASV 323
Query: 398 HPTAIVGPNVSIDDGAVIGPGVRIKESIILQG-ASIGNHSLVLNSIVGRNSKV 449
T G + SI DGA +GP ++ L +G V NS +G +KV
Sbjct: 324 VRTH--GSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKV 374
>pdb|3SPT|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Acetyl Coenzyme A And
Uridine-Diphosphate-N-Acetylglucosamine
pdb|3ST8|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Coenzyme A, Glucosamine 1-Phosphate And
Uridine-Diphosphate-N- Acetylglucosamine
Length = 501
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 155/413 (37%), Gaps = 86/413 (20%)
Query: 81 SFPGLTQTFVSCGWTTNDTTPGPLKGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVP 140
+FPG T V GP GTR R D+PK L +AG M+ H + A ++
Sbjct: 8 TFPGDTAVLVLAA--------GP--GTRMRS---DTPKVLHTLAGRSMLSHVLHAIAKLA 54
Query: 141 NLKEIIILGYYPSADLQKFVLDMVQEYK------INIRYLQEFWDIIHQQIC--ISLYWT 192
+ I++LG+ D Q+ + +V E I++ H +C +L
Sbjct: 55 PQRLIVVLGH----DHQR-IAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDD 109
Query: 193 WYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSDVVILMHSLYSMAILVTVMATEATRQQSV 252
+ N T G + + +D +I H S A VTV+ T T
Sbjct: 110 YAGNVVVTSG----------DTPLLDADTLAD-LIATHRAVSAA--VTVLTT--TLDDPF 154
Query: 253 YYGCIVRKQQTSEISHYVEK----PSTFVSTLVNCGVYLFSLDIFQNIAAVFQS--KQDE 306
YG I+R Q E+ VE+ PS VN GVY F + ++ + S Q E
Sbjct: 155 GYGRILRTQD-HEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQE 213
Query: 307 FYNGNYMV----NGKDTDFNHI--------------------QLEKEIIMPLAGSGKAYV 342
Y + + +G+ +H+ +L + ++ +G V
Sbjct: 214 LYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVV 273
Query: 343 YQTSKWWSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQC-----KTIGDVYIHSSASV 397
+ W + G R + T+ R Q +C T+ DV + ASV
Sbjct: 274 DPATTWIDVDVTIG------RDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASV 327
Query: 398 HPTAIVGPNVSIDDGAVIGPGVRIKESIILQG-ASIGNHSLVLNSIVGRNSKV 449
T G + SI DGA +GP ++ L +G V NS +G +KV
Sbjct: 328 VRTH--GSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKV 378
>pdb|3D8V|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine
pdb|3D98|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis,
Ligand-Free Form
pdb|3DJ4|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine.
pdb|3DK5|A Chain A, Crystal Structure Of Apo-Glmu From Mycobacterium
Tuberculosis
Length = 495
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 155/413 (37%), Gaps = 86/413 (20%)
Query: 81 SFPGLTQTFVSCGWTTNDTTPGPLKGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVP 140
+FPG T V GP GTR R D+PK L +AG M+ H + A ++
Sbjct: 2 TFPGDTAVLVLAA--------GP--GTRMRS---DTPKVLHTLAGRSMLSHVLHAIAKLA 48
Query: 141 NLKEIIILGYYPSADLQKFVLDMVQEYK------INIRYLQEFWDIIHQQIC--ISLYWT 192
+ I++LG+ D Q+ + +V E I++ H +C +L
Sbjct: 49 PQRLIVVLGH----DHQR-IAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDD 103
Query: 193 WYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSDVVILMHSLYSMAILVTVMATEATRQQSV 252
+ N T G + + +D +I H S A VTV+ T T
Sbjct: 104 YAGNVVVTSG----------DTPLLDADTLAD-LIATHRAVSAA--VTVLTT--TLDDPF 148
Query: 253 YYGCIVRKQQTSEISHYVEK----PSTFVSTLVNCGVYLFSLDIFQNIAAVFQS--KQDE 306
YG I+R Q E+ VE+ PS VN GVY F + ++ + S Q E
Sbjct: 149 GYGRILRTQD-HEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQE 207
Query: 307 FYNGNYMV----NGKDTDFNHI--------------------QLEKEIIMPLAGSGKAYV 342
Y + + +G+ +H+ +L + ++ +G V
Sbjct: 208 LYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVV 267
Query: 343 YQTSKWWSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQC-----KTIGDVYIHSSASV 397
+ W + G R + T+ R Q +C T+ DV + ASV
Sbjct: 268 DPATTWIDVDVTIG------RDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASV 321
Query: 398 HPTAIVGPNVSIDDGAVIGPGVRIKESIILQG-ASIGNHSLVLNSIVGRNSKV 449
T G + SI DGA +GP ++ L +G V NS +G +KV
Sbjct: 322 VRTH--GSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKV 372
>pdb|1914|A Chain A, Signal Recognition Particle Alu Rna Binding Heterodimer,
Srp914
Length = 232
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 20 RYSMKYDHKNGYLKLKMTDDNVCLIYKTEMSQDLKKIDN 58
R +KY H +G L +K+TDD VCL+Y+T+ +QD+KKI+
Sbjct: 172 RVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEK 210
>pdb|2GGO|A Chain A, Crystal Structure Of Glucose-1-Phosphate
Thymidylyltransferase From Sulfolobus Tokodaii
pdb|2GGQ|A Chain A, Complex Of Hypothetical Glucose-1-Phosphate
Thymidylyltransferase From Sulfolobus Tokodaii
Length = 401
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 36/234 (15%)
Query: 254 YGCIVRKQQTSEISHYVEKPSTFVSTLVNCGVYLFSLDIFQNIAAVFQSKQDEFYNGNYM 313
YG +V Q + +S +EKP S L+N G+Y + DIF + + S++ E
Sbjct: 130 YGVLVLDNQNN-LSKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISERGE------- 181
Query: 314 VNGKDTDFNHIQLEKEIIMPLAGSGKAYVYQTSKWWSQLKSAGSAIYANRHYLQLY---- 369
++L I + +A + V + +W + + I N+ L
Sbjct: 182 ----------LELTDAINL-MAKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQ 230
Query: 370 -------------KTRHPERLQCSSQCKTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIG 416
K E + S G VYI + + P + + P + + IG
Sbjct: 231 NLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIG 290
Query: 417 PGVRIKESIILQGASIGNHSLVLNSIVGRNSKVGNWSRVEGTPCDPNPNKAFAK 470
V +KES+I++G+ I + S V +S++ + G + + D K K
Sbjct: 291 ASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVKVNVK 344
>pdb|2V0H|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0I|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0J|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-acetylglucosamine-1-
Phosphate Uridyltransferase (glmu)
pdb|2V0K|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0L|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2VD4|A Chain A, Structure Of Small-Molecule Inhibitor Of Glmu From
Haemophilus Influenzae Reveals An Allosteric Binding
Site
pdb|2W0V|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 1
pdb|2W0W|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 2
Length = 456
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 140/357 (39%), Gaps = 45/357 (12%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMV 164
KGTR D PK L +AG PM++H I+ Q+ + E I L Y DL + L
Sbjct: 15 KGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGS--ENIHLIYGHGGDLMRTHLANE 69
Query: 165 QEYKINIRYLQEFWDIIHQQICISLYWTWYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSD 224
Q +N E H + ++++ + +Y ++ +E + +E + +
Sbjct: 70 Q---VNWVLQTEQLGTAH---AVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE 123
Query: 225 VVILMHSLYSMAILVTVMATEATRQQSVYYGCIVRKQQTSEISHYVEKPSTFVSTL---- 280
I L+TV T YG I+R + + VE+ L
Sbjct: 124 NGIA---------LLTVNLDNPTG-----YGRIIR--ENGNVVAIVEQKDANAEQLNIKE 167
Query: 281 VNCGVYLFSLDIFQN-IAAVFQSK-QDEFYNGNYMVNGKDTDFNHIQLEKEIIMPLAGSG 338
VN GV + F+ +A V + Q E+Y + + + + ++ +M + G+
Sbjct: 168 VNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGAN 227
Query: 339 KAYVYQTSKWWSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQCKTIGDVYIHSSASVH 398
+ + Q K A ++ L+ P R + DV I +
Sbjct: 228 NRLQLAALERYFQNKQA------SKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNV--- 278
Query: 399 PTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVGNWSRV 455
I+ NV + D IG G +K +I I +S++ +SIVG + +G +SR+
Sbjct: 279 ---IIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRL 332
>pdb|1JYK|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
Length = 254
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGY 150
GTR RPL+ ++PK L V P+I++ IE + III+GY
Sbjct: 36 GTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGY 80
>pdb|1JYL|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|B Chain B, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|C Chain C, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|D Chain D, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
Length = 254
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGY 150
GTR RPL+ ++PK L V P+I++ IE + III+GY
Sbjct: 36 GTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGY 80
>pdb|4EQY|A Chain A, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|B Chain B, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|C Chain C, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|E Chain E, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|F Chain F, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|G Chain G, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
Length = 283
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 393 SSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQG-ASIGNHSLVL-NSIVGRNSKVG 450
S + +HPTAI+ P + + +GP + ++ + +IG+HS++ ++ +G ++++G
Sbjct: 21 SMSRIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIG 80
Query: 451 NWSRVEGTPCD 461
+++ V G P D
Sbjct: 81 HYASVGGRPQD 91
>pdb|3JUJ|A Chain A, The Crystal Structure Of Apo- Udp-Glucose
Pyrophosphorylase
pdb|3JUJ|B Chain B, The Crystal Structure Of Apo- Udp-Glucose
Pyrophosphorylase
pdb|3JUJ|C Chain C, The Crystal Structure Of Apo- Udp-Glucose
Pyrophosphorylase
pdb|3JUJ|D Chain D, The Crystal Structure Of Apo- Udp-Glucose
Pyrophosphorylase
pdb|3JUK|A Chain A, The Crystal Structure Of Udp-Glucose Pyrophosphorylase
Compl Udp-Glucose
pdb|3JUK|B Chain B, The Crystal Structure Of Udp-Glucose Pyrophosphorylase
Compl Udp-Glucose
pdb|3JUK|C Chain C, The Crystal Structure Of Udp-Glucose Pyrophosphorylase
Compl Udp-Glucose
pdb|3JUK|D Chain D, The Crystal Structure Of Udp-Glucose Pyrophosphorylase
Compl Udp-Glucose
Length = 281
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 103/264 (39%), Gaps = 41/264 (15%)
Query: 101 PGPLKGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFV 160
P GTRF P++ PK + P+ P+IQ+ +E ++ I+ G + F
Sbjct: 8 PAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFD 67
Query: 161 LDMVQEYKIN----IRYLQEFWDIIHQQICISLYWTWYRNTRSTYGIYRNSLHWVQEAVY 216
E++I L+ +II ++ C S Y + G+ L EA+
Sbjct: 68 TSYEIEHQIQGTNKENALKSIRNII-EKCCFS-----YVRQKQMKGLGHAIL--TGEALI 119
Query: 217 ----FTLEIRSDVVI---------LMHSLYSMAILVTVMATEATRQQSVYYGCIVR---- 259
F + + D+ I M SLY V E ++ YG ++R
Sbjct: 120 GNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYG-VIRGEWL 178
Query: 260 KQQTSEISHYVEKPST--FVSTLVNCGVYLFSLDIFQNIAAVFQSKQDEFYNGNYMVNGK 317
++ EI VEKP+ S L G Y+ + DIF+ ++ K +E +
Sbjct: 179 EEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEI---------Q 229
Query: 318 DTDFNHIQLEKEIIMPLAGSGKAY 341
TD Q +++ I+ GK Y
Sbjct: 230 ITDALRTQAKRKRIIAYQFKGKRY 253
>pdb|3EH0|A Chain A, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|B Chain B, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|C Chain C, Crystal Structure Of Lpxd From Escherichia Coli
Length = 341
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 391 IHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVG 450
I SA + TA +G NVSI AVI GV + +++I+ GA VG+NSK+G
Sbjct: 100 IAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVII-GAG---------CFVGKNSKIG 149
Query: 451 NWSRV 455
SR+
Sbjct: 150 AGSRL 154
>pdb|3FWW|A Chain A, The Crystal Structure Of The Bifunctional
N-Acetylglucosamine-1- Phosphate
UridyltransferaseGLUCOSAMINE-1-Phosphate
Acetyltransferase From Yersinia Pestis Co92
Length = 456
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQV 139
KGTR D PK L P+AG PM+QH I+A +++
Sbjct: 15 KGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKL 46
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 375 ERLQCSSQCKTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIIL-QGASIG 433
+R++ + C + + I + + P ++ + +D +GP R++ L +GA +G
Sbjct: 288 DRVRIGTGC-VLKNCVIGDDSEISPYTVL-EDARLDANCTVGPFARLRPGAELAEGAHVG 345
Query: 434 NHSLVLNSIVGRNSKVGNWS 453
N + + +G+ SK G+ S
Sbjct: 346 NFVEIKKARLGKGSKAGHLS 365
>pdb|2UX8|A Chain A, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|B Chain B, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|C Chain C, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|D Chain D, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|E Chain E, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|F Chain F, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|G Chain G, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate.
pdb|2UX8|H Chain H, Crystal Structure Of Sphingomonas Elodea Atcc 31461
Glucose- 1-phosphate Uridylyltransferase In Complex With
Glucose- 1-phosphate
Length = 297
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 33/211 (15%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMVQ 165
GTRF P + PK + PV P+IQ+ ++ V+ + I + G SA F D+
Sbjct: 25 GTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHF--DIAY 82
Query: 166 EYKINIRYLQEFWDIIHQQICISLYWTWYRNTRSTYGIYRNSLHWVQEAVYFTLEIRSD- 224
E + + + D+ L T + Y + + + AV+ +I D
Sbjct: 83 ELEATMAARGKSLDV--------LDGTRLKPGNIAY-VRQQEPMGLGHAVWCARDIVGDE 133
Query: 225 --VVIL--------------MHSLYSMAILVTVMATEATRQQSVYYGCIVRKQQT---SE 265
V+L M Y+ + A E Q+ YG I Q +E
Sbjct: 134 PFAVLLPDDFMFGQPGCLKQMVDAYNKVGGNLICAEEVPDDQTHRYGIITPGTQDGVLTE 193
Query: 266 ISHYVEKPS--TFVSTLVNCGVYLFSLDIFQ 294
+ VEKP+ T S L G Y+ ++ +
Sbjct: 194 VKGLVEKPAPGTAPSNLSVIGRYILQPEVMR 224
>pdb|4FCE|A Chain A, Crystal Structure Of Yersinia Pestis Glmu In Comlex With
Alpha-D- Glucosamine 1-Phosphate (Gp1)
Length = 459
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQV 139
KGTR D PK L P+AG PM+QH I+A +++
Sbjct: 18 KGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKL 49
>pdb|3GVD|A Chain A, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|B Chain B, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|C Chain C, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|D Chain D, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|E Chain E, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|F Chain F, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|G Chain G, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|H Chain H, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|I Chain I, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|J Chain J, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|K Chain K, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|L Chain L, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
Length = 276
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 409 IDDGAVIGPGVRIKESI-ILQGASIGNHSLVLNSIVGRNSKVGNWSRVEGTPCDPNPN 465
I +G +IG G +I +I + +GA IG S+VL S+ + G +R+ G P P+
Sbjct: 199 IREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIVGKPESDKPS 256
>pdb|3T57|A Chain A, Activity And Crystal Structure Of Arabidopsis
Udp-N-Acetylglucosamine Acyltransferase
Length = 305
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 388 DVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGAS--IGNHSLVLNSIVGR 445
+V IH SA VHP A++G VS+ IG V++ L +S GN L + ++
Sbjct: 7 EVLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMT 66
Query: 446 NSKVGN 451
+ VG+
Sbjct: 67 GAVVGD 72
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 393 SSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIIL 427
S +HP+A+V PN I G +GP I S+ L
Sbjct: 6 SEVLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKL 40
>pdb|3MQG|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQH|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
Length = 192
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 395 ASVHPTAIVGPNVSIDDGAVIGPGVRIKESI-ILQGASIGNH-SLVLNSIVGRNSKVGNW 452
A++HPTAIV D+GA IG RI + I GA IG SL N VG ++GN
Sbjct: 4 ATIHPTAIV------DEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNR 57
Query: 453 SRVE 456
+++
Sbjct: 58 VKIQ 61
>pdb|1V3W|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|1V67|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|2FKO|A Chain A, Structure Of Ph1591 From Pyrococcus Horikoshii Ot3
Length = 173
Score = 33.5 bits (75), Expect = 0.28, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 388 DVYIHSSASVHPTAI-----VGPNVSIDDGAVIGPGVRIK-ESIILQGASIGNHSLV-LN 440
+V IH+S +PT I +G N + GA +G V I S+IL GA IG+H ++
Sbjct: 61 NVSIHTSHG-YPTEIGEYVTIGHNAMVH-GAKVGNYVIIGISSVILDGAKIGDHVIIGAG 118
Query: 441 SIVGRNSKVGNWSRVEGTP 459
++V N ++ ++S V G P
Sbjct: 119 AVVPPNKEIPDYSLVLGVP 137
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 386 IGDVYIHSSASVHPTAI---------------VGPNVSIDDG----AVIGPGVRIKESII 426
IGDV + SV P+A+ V NVSI IG V I + +
Sbjct: 26 IGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAM 85
Query: 427 LQGASIGNHSLV-LNSIVGRNSKVGNWSRVEGTPCDPNPNK 466
+ GA +GN+ ++ ++S++ +K+G+ + P PNK
Sbjct: 86 VHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVP-PNK 125
>pdb|2E3D|A Chain A, Crystal Structure Of E. Coli Glucose-1-Phosphate
Uridylyltransferase
pdb|2E3D|B Chain B, Crystal Structure Of E. Coli Glucose-1-Phosphate
Uridylyltransferase
pdb|2E3D|C Chain C, Crystal Structure Of E. Coli Glucose-1-Phosphate
Uridylyltransferase
pdb|2E3D|D Chain D, Crystal Structure Of E. Coli Glucose-1-Phosphate
Uridylyltransferase
Length = 302
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQ-----KFV 160
GTR P + PK + P+ P+IQ+ + C+ + EI+++ + ++ F
Sbjct: 19 GTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAA-GITEIVLVTHSSKNSIENHFDTSFE 77
Query: 161 LDMVQEYKINIRYLQEFWDIIHQQICI 187
L+ + E ++ + L E I + I
Sbjct: 78 LEAMLEKRVKRQLLDEVQSICPPHVTI 104
>pdb|2IC7|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2P2O|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|D Chain D, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|E Chain E, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|F Chain F, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
Length = 185
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 402 IVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRN-SKVGNW 452
++G NV I AVI PGV I ++ ++ ++ + N++VG N +KV W
Sbjct: 132 VIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKW 183
>pdb|3HL3|A Chain A, 2.76 Angstrom Crystal Structure Of A Putative
Glucose-1-Phosphate Thymidylyltransferase From Bacillus
Anthracis In Complex With A Sucrose.
pdb|4ECM|A Chain A, 2.3 Angstrom Crystal Structure Of A Glucose-1-Phosphate
Thymidylyltransferase From Bacillus Anthracis In Complex
With Thymidine-5-Diphospho-Alpha-D-Glucose And
Pyrophosphate
Length = 269
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMVQ 165
G+R P++ + K L PV PMI H + Q +II G D+ F L Q
Sbjct: 35 GSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSF-LGSGQ 93
Query: 166 EYKINIRY 173
E+ ++ Y
Sbjct: 94 EFGVSFTY 101
>pdb|1G95|A Chain A, Crystal Structure Of S.Pneumoniae Glmu, Apo Form
pdb|1G97|A Chain A, S.Pneumoniae Glmu Complexed With Udp-N-Acetylglucosamine
And Mg2+
Length = 459
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMV 164
KGTR + D PK L VAG+ M++H + + K + ++G+ A+L + VL
Sbjct: 12 KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGH--KAELVEEVLAGQ 66
Query: 165 QEY 167
E+
Sbjct: 67 TEF 69
>pdb|4AAW|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
pdb|4AC3|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
Length = 459
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMV 164
KGTR + D PK L VAG+ M++H + + K + ++G+ A+L + VL
Sbjct: 12 KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGH--KAELVEEVLAEQ 66
Query: 165 QEY 167
E+
Sbjct: 67 TEF 69
>pdb|1HM9|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM9|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM8|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM8|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM0|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
pdb|1HM0|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
Length = 468
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 105 KGTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIILGYYPSADLQKFVLDMV 164
KGTR + D PK L VAG+ M++H + + K + ++G+ A+L + VL
Sbjct: 21 KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGH--KAELVEEVLAGQ 75
Query: 165 QEY 167
E+
Sbjct: 76 TEF 78
>pdb|1J2Z|A Chain A, Crystal Structure Of Udp-n-acetylglucosamine
Acyltransferase
Length = 270
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 391 IHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVG 450
I +A + P A + V I + VIG GV++ E + L N +L ++ VG+N+++
Sbjct: 4 IAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLH----NNVTLQGHTFVGKNTEIF 59
Query: 451 NWSRVEGTPCD 461
++ + P D
Sbjct: 60 PFAVLGTQPQD 70
>pdb|1OCX|A Chain A, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|B Chain B, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|C Chain C, E. Coli Maltose-O-Acetyltransferase
Length = 182
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 366 LQLYKTRHPERLQCSSQCKTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESI 425
+ +Y HP I V +S A + +G NV I AVI PGV I +++
Sbjct: 105 VHIYTATHP-----------IDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNV 153
Query: 426 ILQGASIGNHSLVLNSIVGRN 446
++ ++ + N +VG N
Sbjct: 154 VVASGAVVTKDVPDNVVVGGN 174
>pdb|2AQ9|A Chain A, Structure Of E. Coli Lpxa With A Bound Peptide That Is
Competitive With Acyl-Acp
pdb|2JF3|A Chain A, Nucleotide Substrate Binding By Udp-N-Acetylglucosamine
Acyltransferase
pdb|1LXA|A Chain A, Udp N-Acetylglucosamine Acyltransferase
pdb|2QIA|A Chain A, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
pdb|2QIV|X Chain X, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
Length = 262
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 391 IHSSASVHPTAIV------GPNVSIDDGAVIGPGVRIKESIILQ 428
I SA VHPTAIV G N I ++GP V I E +L+
Sbjct: 2 IDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLK 45
>pdb|2JF2|A Chain A, Nucleotide Substrate Binding By Udp-n-acetylglucosamine
Acyltransferase
Length = 264
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 391 IHSSASVHPTAIV------GPNVSIDDGAVIGPGVRIKESIILQ 428
I SA VHPTAIV G N I ++GP V I E +L+
Sbjct: 4 IDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLK 47
>pdb|3BFP|A Chain A, Crystal Structure Of Apo-Pgld From Campylobacter Jejuni
pdb|2VHE|A Chain A, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
pdb|2VHE|B Chain B, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
Length = 194
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Query: 391 IHSSASVHPTAIVGPN--VSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSK 448
IH SA + P+AIV N + I VI +I++ +IL +S+ H V
Sbjct: 78 IHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECV---------- 127
Query: 449 VGNWSRVE-GTPCDPNPNKAFAKMDNPPLFNSNGKLNPSITILGDGVTVPGELIVLN 504
+G +S V G C N K+ N + P++++ D + G +V N
Sbjct: 128 IGEFSHVSVGAKCAGN-----VKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 179
>pdb|3BSS|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, With Native
Substrate
pdb|3BSW|A Chain A, Pgld-Citrate Complex, From Campylobacter Jejuni Nctc 11168
pdb|3BSY|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|B Chain B, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|C Chain C, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
Length = 198
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Query: 391 IHSSASVHPTAIVGPN--VSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSK 448
IH SA + P+AIV N + I VI +I++ +IL +S+ H V
Sbjct: 82 IHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECV---------- 131
Query: 449 VGNWSRVE-GTPCDPNPNKAFAKMDNPPLFNSNGKLNPSITILGDGVTVPGELIVLN 504
+G +S V G C N K+ N + P++++ D + G +V N
Sbjct: 132 IGEFSHVSVGAKCAGN-----VKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 183
>pdb|3SRT|A Chain A, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|3SRT|B Chain B, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|4ISX|A Chain A, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
pdb|4ISX|B Chain B, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
Length = 188
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 366 LQLYKTRHPERLQCSSQCKTIGD-VYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKES 424
+Q+Y HP Q + G V I + + I+ P ++I D VIG G + +
Sbjct: 109 VQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168
Query: 425 IILQGASIGNHSLVLNSI 442
I ++GN V+ I
Sbjct: 169 IPPNTVAVGNPCRVIKKI 186
>pdb|1H6J|A Chain A, The Three-Dimensional Structure Of Capsule-Specific
Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase From
Escherichia Coli
pdb|1H6J|B Chain B, The Three-Dimensional Structure Of Capsule-Specific
Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase From
Escherichia Coli
pdb|1H7E|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Apo-Enzyme
pdb|1H7E|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Apo-Enzyme
pdb|1H7F|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cmp Complex
pdb|1H7F|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cmp Complex
pdb|1H7G|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Ctp Mg2+ Complex
pdb|1H7G|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Ctp Mg2+ Complex
pdb|1H7H|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cdp Complex
pdb|1H7H|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cdp Complex
pdb|1H7T|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Here Complex With Cmp-Neuac,
Cmp-Neuac Complex
pdb|1H7T|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Here Complex With Cmp-Neuac,
Cmp-Neuac Complex
pdb|1GQ9|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Ctp At 100k
pdb|1GQ9|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Ctp At 100k
pdb|1GQC|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Cmp-Kdo At 100k
pdb|1GQC|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Cmp-Kdo At 100k
Length = 245
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 118 KPLFPVAGLPMIQHHIEACVQVPNLKEI 145
KPL + G PMIQH E +QV + E+
Sbjct: 19 KPLLDIVGKPMIQHVYERALQVAGVAEV 46
>pdb|2NPO|A Chain A, Crystal Structure Of Putative Transferase From
Campylobacter Jejuni Subsp. Jejuni Nctc 11168
Length = 207
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 391 IHSSASVHPTAIVGPNVS--IDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSK 448
IH SA + P+AIV N I VI +I++ +IL +S+ H V
Sbjct: 81 IHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECV---------- 130
Query: 449 VGNWSRVE-GTPCDPNPNKAFAKMDNPPLFNSNGKLNPSITILGDGVTVPGELIVLN 504
+G +S V G C N K+ N + P++++ D + G +V N
Sbjct: 131 IGEFSHVSVGAKCAGN-----VKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 182
>pdb|3R8Y|A Chain A, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|B Chain B, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|C Chain C, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|D Chain D, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|E Chain E, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|F Chain F, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
Length = 240
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 349 WSQLKSAGSAIYANRHYLQLYKTRHPERLQCSSQCKTIGDVYIHSSASVHPTAIVGPNVS 408
WS++K+ + N Y+ Y + R G A + P AI+ +V
Sbjct: 54 WSEIKTI---LDENSKYIVDYVVENDRRNSAIPMLDLKG-----IKARIEPGAIIRDHVE 105
Query: 409 IDDGAVIGPGVRIKESIILQGASIGNHSLV-LNSIVGRNSKVG 450
I D AVI + + I GA IG S++ +N+++G + VG
Sbjct: 106 IGDNAVI-----MMNATINIGAVIGEGSMIDMNAVLGGRATVG 143
>pdb|2Q5F|A Chain A, Crystal Structure Of Lmnadk1 From Listeria Monocytogenes
pdb|3V8Q|A Chain A, Crystal Structure Of Nad Kinase 1 H223e Mutant From
Listeria Monocytogenes In Complex With
5'-Amino-5'-Deoxyadenosine
pdb|3V8R|A Chain A, Crystal Structure Of Nad Kinase 1 H223e Mutant From
Listeria Monocytogenes In Complex With
5'-Amino-8-Bromo-5'-Deoxyadenosine
Length = 272
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 2 KYDHKNGYLKLKMTDDNARYSMKYDHKNGYLKLKMTDDNVCLIYKTEMSQDLKKIDNAKK 61
K D K+ L+L M Y M+YD + + + D L + + L +I
Sbjct: 8 KGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGI 67
Query: 62 HVESCDF--DWGPSEGHKI 78
H F DW P+E K+
Sbjct: 68 HTGHLGFYADWRPAEADKL 86
>pdb|2I1W|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes
pdb|2I1W|B Chain B, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes
pdb|2I1W|C Chain C, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes
pdb|2I1W|D Chain D, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes
pdb|2I29|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes
pdb|2I2A|A Chain A, Crystal Structure Of Lmnadk1 From Listeria Monocytogenes
pdb|2I2B|A Chain A, Crystal Structure Of Lmnadk1 From Listeria Monocytogenes
pdb|2I2C|A Chain A, Crystal Structure Of Lmnadk1
pdb|2I2D|A Chain A, Crystal Structure Of Lmnadk1
pdb|4DY6|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With 2'-Phosphate
Bis(Adenosine)-5'-Diphosphate
pdb|3V7U|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With Mta
pdb|3V7W|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With
5'-Azido-5'-Deoxyadenosine
pdb|3V7Y|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With
5'-N-Propargylamino-5'-Deoxyadenosine
pdb|3V80|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With
5'-O-Propargylamino-5'-Deoxyadenosine
pdb|3V8M|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complexe With
5'-Azido-8-Bromo-5'-Deoxyadenosine
pdb|3V8N|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With
8-Bromo-5'-Amino-5'-Deoxyadenosine, Reacted With A
Citrate Molecule In N Site
pdb|3V8P|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria
Monocytogenes In Complex With A New Di-Adenosine
Inhibitor Formed In Situ
Length = 272
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 2 KYDHKNGYLKLKMTDDNARYSMKYDHKNGYLKLKMTDDNVCLIYKTEMSQDLKKIDNAKK 61
K D K+ L+L M Y M+YD + + + D L + + L +I
Sbjct: 8 KGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGI 67
Query: 62 HVESCDF--DWGPSEGHKI 78
H F DW P+E K+
Sbjct: 68 HTGHLGFYADWRPAEADKL 86
>pdb|3V4E|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|B Chain B, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|C Chain C, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
Length = 202
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 368 LYKTRHPERLQCSSQC-KTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESII 426
Y HP ++ + G ++I S+ V P V+I +G+VIG G + + I
Sbjct: 112 FYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIP 171
Query: 427 LQGASIGNHSLVLNSI 442
++GN V+ I
Sbjct: 172 PHSLAVGNPCKVVRKI 187
>pdb|3FTT|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
From Staphylococcus Aureus
Length = 199
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 368 LYKTRHPERLQCSSQC-KTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESII 426
Y HP ++ + G ++I S+ V P V+I +G+VIG G + + I
Sbjct: 109 FYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIP 168
Query: 427 LQGASIGNHSLVLNSI 442
++GN V+ I
Sbjct: 169 PHSLAVGNPCKVVRKI 184
>pdb|4EAA|A Chain A, X-Ray Crystal Structure Of The H141n Mutant Of Perosamine
N- Acetyltransferase From Caulobacter Crescentus In
Complex With Coa And Gdp-Perosamine
Length = 220
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 396 SVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVGNWSRV 455
++HP+A+V P+V + +G + GV I + IG+ +++ V V N R+
Sbjct: 101 AIHPSAVVSPSVRLGEGVAVMAGVAINAD-----SWIGDLAIINTGAV-----VDNDCRL 150
Query: 456 EGTPCDPNPNKAFA---KMDNPPLFNSNGKLNPSITILGDGVTVPGELIV 502
G C P A A + ++ P +TI D + G ++V
Sbjct: 151 -GAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVV 199
>pdb|4EGG|A Chain A, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|B Chain B, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|C Chain C, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|D Chain D, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|E Chain E, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|F Chain F, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
Length = 207
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 368 LYKTRHPERLQCSSQC-KTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESII 426
Y HP ++ + G ++I S+ V P V+I +G+VIG G + + I
Sbjct: 109 FYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIP 168
Query: 427 LQGASIGNHSLVLNSI 442
++GN V+ I
Sbjct: 169 PHSLAVGNPCKVVRKI 184
>pdb|4DCL|A Chain A, Computationally Designed Self-Assembling Tetrahedron
Protein, T308, Crystallized In Space Group F23
Length = 207
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 368 LYKTRHPERLQCSSQC-KTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESII 426
Y HP ++ + G ++I S+ V P V+I +G+VIG G + + I
Sbjct: 109 FYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIP 168
Query: 427 LQGASIGNHSLVLNSI 442
++GN V+ I
Sbjct: 169 PHSLAVGNPCKVVRKI 184
>pdb|3HJJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3IGJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
Length = 190
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 403 VGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRN 446
+G NV + GA+I PGV I ++ ++ ++ + N +VG N
Sbjct: 137 IGNNVWVGGGAIINPGVSIGDNAVIASGAVVTKDVPNNVVVGGN 180
>pdb|3P1B|A Chain A, Crystal Structure Of The Native Serine Acetyltransferase 1
From Entamoeba Histolytica
Length = 314
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 375 ERLQCSSQCKTIGDVYIHSSASVHPTAIV--------GPNVSIDDGAVIGPGVRIKESII 426
ER C ++ V+ ++S +HP A + G V I + A+IG RI +S+
Sbjct: 148 ERYYCREMMES---VHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVT 204
Query: 427 LQGASIGNHSLVLNSIVGRNSKVGNW 452
L V+ R+ VG++
Sbjct: 205 LGAMHFQEEGGVIKRGTKRHPTVGDY 230
>pdb|3Q1X|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine
Acetyltransferase 1 In Complex With L-Serine
Length = 313
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 375 ERLQCSSQCKTIGDVYIHSSASVHPTAIV--------GPNVSIDDGAVIGPGVRIKESII 426
ER C ++ V+ ++S +HP A + G V I + A+IG RI +S+
Sbjct: 147 ERYYCREMMES---VHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVT 203
Query: 427 LQGASIGNHSLVLNSIVGRNSKVGNW 452
L V+ R+ VG++
Sbjct: 204 LGAMHFQEEGGVIKRGTKRHPTVGDY 229
>pdb|3R3R|A Chain A, Structure Of The Yrda Ferripyochelin Binding Protein From
Salmonella Enterica
Length = 187
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 30/108 (27%)
Query: 366 LQLYKTRHP---ERLQCSSQCKTIGDVYIHSSASVHPTAIV---------GPNVSIDDGA 413
L+ YK P +R+ + IGDV + + P ++ G +I DG+
Sbjct: 8 LRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGS 67
Query: 414 V-----------------IGPGVRIKESIILQGASIGNHSLV-LNSIV 443
V IG V + ++L G +IGN LV + SIV
Sbjct: 68 VLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIV 115
>pdb|3P47|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine
Acetyltransferase 1 In Complex With L-Cysteine
Length = 315
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 375 ERLQCSSQCKTIGDVYIHSSASVHPTAIV--------GPNVSIDDGAVIGPGVRIKESII 426
ER C ++ V+ ++S +HP A + G V I + A+IG RI +S+
Sbjct: 149 ERYYCREMMES---VHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVT 205
Query: 427 LQGASIGNHSLVLNSIVGRNSKVGNW 452
L V+ R+ VG++
Sbjct: 206 LGAMHFQEEGGVIKRGTKRHPTVGDY 231
>pdb|4ARW|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIIL 148
GTR P +L K L PV PMI + + + + + ++EI+I+
Sbjct: 22 GTRLHPATLAISKQLLPVYDKPMIYYPL-STLMLAGIREILII 63
>pdb|4B2X|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 303
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIIL 148
GTR P +L K L PV PMI + + + + + ++EI+I+
Sbjct: 23 GTRLHPATLAISKQLLPVYDKPMIYYPL-STLMLAGIREILII 64
>pdb|1FXO|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FZW|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1G0R|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G1L|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G2V|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G3L|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|4ASJ|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 293
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 106 GTRFRPLSLDSPKPLFPVAGLPMIQHHIEACVQVPNLKEIIIL 148
GTR P +L K L PV PMI + + + + + ++EI+I+
Sbjct: 13 GTRLHPATLAISKQLLPVYDKPMIYYPL-STLMLAGIREILII 54
>pdb|3R1W|A Chain A, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|B Chain B, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|C Chain C, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
Length = 189
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 26/90 (28%)
Query: 375 ERLQCSSQCKTIGDVYIHSSASVHPTAIV---------GPNVSIDDGAV----------- 414
ER+ IGDV + SV P A++ G S+ DG+V
Sbjct: 24 ERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNP 83
Query: 415 ------IGPGVRIKESIILQGASIGNHSLV 438
IG V I +L G +IGN L+
Sbjct: 84 GGYPLIIGDDVTIGHQAMLHGCTIGNRVLI 113
>pdb|1XHD|A Chain A, X-Ray Crystal Structure Of Putative Acetyltransferase,
Product Of Bc4754 Gene [bacillus Cereus]
Length = 173
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 337 SGKAYVYQTSKWWSQLKSAGS---AIYANRHYLQLYKTRH--PERLQCSSQCKTIGDVYI 391
+G YV + S W G I +R +Q T H P+ T+G I
Sbjct: 28 TGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVI 87
Query: 392 HSSASVHPTAIVGPNVSIDDGAVIGPGVRIKE-SIILQGASIGNHSLVLNSIVGRNSKV 449
S + A++G I DGA IG G I S++ QG I ++L GR +KV
Sbjct: 88 LHSCHIKKDALIGXGSIILDGAEIGEGAFIGAGSLVSQGKKIPPNTLAF----GRPAKV 142
>pdb|3HSQ|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
Length = 259
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 391 IHSSASVHPTAIVGPNVSIDDGAVIGPGVRI-------KESIILQGASIG--------NH 435
+H S V P +I+ NVSI +G +I V+I K + QGA IG N
Sbjct: 15 LHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQ 74
Query: 436 SLVLNSIVGRNSKVGNWSRV-EGTPCD 461
L+ +++G ++ +S + +GT D
Sbjct: 75 QLLTKTVIGDHNIFREYSNIHKGTKED 101
>pdb|4EA7|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coa And Gdp-Perosamine At 1.0
Angstrom Resolution
pdb|4EA8|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coenzyme A And
Gdp-N-Acetylperosamine At 1 Angstrom Resolution
pdb|4EA9|A Chain A, X-Ray Structure Of Gdp-Perosamine N-Acetyltransferase In
Complex With Transition State Analog At 0.9 Angstrom
Resolution
Length = 220
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 396 SVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLV-LNSIVGRNSKVGNWSR 454
++HP+A+V P+V + +G + GV I + IG+ +++ ++V + ++
Sbjct: 101 AIHPSAVVSPSVRLGEGVAVMAGVAINAD-----SWIGDLAIINTGAVVDHDCRL----- 150
Query: 455 VEGTPCDPNPNKAFA---KMDNPPLFNSNGKLNPSITILGDGVTVPGELIV 502
G C P A A + ++ P +TI D + G ++V
Sbjct: 151 --GAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVV 199
>pdb|4E6T|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|B Chain B, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|C Chain C, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
Length = 294
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 391 IHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVG 450
IHS+A + P+A++ +V I +IGP V I GA HS V +VG +++G
Sbjct: 39 IHSTAIIDPSAVIASDVQIGPYCIIGPQVTI-------GAGTKLHSHV---VVGGFTRIG 88
>pdb|1HV9|A Chain A, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|1HV9|B Chain B, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|2OI5|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI5|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI6|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI6|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI7|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
pdb|2OI7|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
Length = 456
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 376 RLQCSSQCKTIGDVYIHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESI-ILQGASIGN 434
R++ + C I + I + P +V + ++ IGP R++ +L+GA +GN
Sbjct: 289 RVKIGTGC-VIKNSVIGDDCEISPYTVV-EDANLAAACTIGPFARLRPGAELLEGAHVGN 346
Query: 435 HSLVLNSIVGRNSKVGNWSRVEGTPCDPNPNKAFAKMDNPPLFNSNGKLNPSITILGDGV 494
+ + +G+ SK G+ + + N N + N +G N TI+GD V
Sbjct: 347 FVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTI----TCNYDGA-NKFKTIIGDDV 401
Query: 495 TV 496
V
Sbjct: 402 FV 403
>pdb|4EAB|A Chain A, X-Ray Crystal Structure Of The H141a Mutant Of
Gdp-Perosamine N-Acetyl Transferase From Caulobacter
Crescentus In Complex With Coa And Gdp- Perosamine
Length = 220
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 396 SVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLV-LNSIVGRNSKVGNWSR 454
++HP+A+V P+V + +G + GV I + IG+ +++ ++V + ++
Sbjct: 101 AIHPSAVVSPSVRLGEGVAVMAGVAINAD-----SWIGDLAIINTGAVVDADCRL----- 150
Query: 455 VEGTPCDPNPNKAFA---KMDNPPLFNSNGKLNPSITILGDGVTVPGELIV 502
G C P A A + ++ P +TI D + G ++V
Sbjct: 151 --GAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVV 199
>pdb|4E6U|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.4a
Resolution (P63 Form)
Length = 265
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 391 IHSSASVHPTAIVGPNVSIDDGAVIGPGVRIKESIILQGASIGNHSLVLNSIVGRNSKVG 450
IHS+A + P+A++ +V I +IGP V I GA HS V +VG +++G
Sbjct: 10 IHSTAIIDPSAVIASDVQIGPYCIIGPQVTI-------GAGTKLHSHV---VVGGFTRIG 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,752,392
Number of Sequences: 62578
Number of extensions: 737025
Number of successful extensions: 1742
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 145
length of query: 523
length of database: 14,973,337
effective HSP length: 103
effective length of query: 420
effective length of database: 8,527,803
effective search space: 3581677260
effective search space used: 3581677260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)