BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy178
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90578|VDHAP_CHICK Vitamin D3 hydroxylase-associated protein OS=Gallus gallus PE=1
SV=3
Length = 464
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G ++ G +K G+ ED+ IV++L+ GAIP TN+P+ +++ +N I G+T+NP
Sbjct: 157 GHVSSAGLVKFLGQVKEEDSVIVQVLKSQGAIPFVKTNIPQTMINYDCSNLIFGQTLNPL 216
Query: 69 DFSRTPGGSSGGE 81
+ +TPGGSSGGE
Sbjct: 217 NHQKTPGGSSGGE 229
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1
Length = 532
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
+ G+ N++G + + A DA +V +L+ AGAIPL TN ELC +E++N I G++ N
Sbjct: 136 LQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNN 195
Query: 67 PYDFSRTPGGSSGGE 81
PYD GGSSGGE
Sbjct: 196 PYDLQHIVGGSSGGE 210
>sp|Q17449|FAAH1_CAEEL Fatty acid amide hydrolase 1 OS=Caenorhabditis elegans GN=faah-1
PE=2 SV=1
Length = 572
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
V G G ++ A+ED+ V+ ++ G IP C TNVP+ S+ +N + G T N
Sbjct: 144 VKGYDTTRGFVQDAYHPATEDSIQVEHYKKLGLIPFCQTNVPQSLLSYNCSNPLFGTTTN 203
Query: 67 PYDFSRTPGGSSGGE 81
PYD +RT GGSSGGE
Sbjct: 204 PYDSTRTCGGSSGGE 218
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1
Length = 532
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
+ G+ N+TG L + + DAP V +L+ AGAIPL TN ELC E+ N++ G T N
Sbjct: 134 LQGMPNSTGLLTRRDLVSGADAPSVALLKRAGAIPLGVTNCSELCMWLESHNHLYGITNN 193
Query: 67 PYDFSR 72
PYDF R
Sbjct: 194 PYDFER 199
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1
Length = 526
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 7 VDGLSNATGALKLKGRK-ASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTV 65
+ G+ N +G LK +G+ AS DAP V +L+ AGAIPL TN ELC E+ N++ G T
Sbjct: 133 LQGMPN-SGGLKSRGKVLASVDAPPVALLKRAGAIPLGVTNTSELCMWMESNNHLYGITS 191
Query: 66 NPYDFSR 72
NPY+ R
Sbjct: 192 NPYNLER 198
>sp|O59805|YJV7_SCHPO Putative amidase C550.07 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC550.07 PE=3 SV=1
Length = 533
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 24 ASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTPGGSSGGE 81
A +D+ +V +R+AGA+ C T P+ ET++ +TG TVNP++ TPGGSSGGE
Sbjct: 154 AEKDSDLVATVRKAGAVFYCRTPQPQAIMHLETSSNLTGVTVNPFNRKLTPGGSSGGE 211
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatA PE=3 SV=1
Length = 476
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ V GL N+ G+ L+G +A +++ L +AGA+ L TN+ E T G T
Sbjct: 73 ISVVGLPNSCGSKILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTETSYYGPT 132
Query: 65 VNPYDFSRTPGGSSGG 80
NP+D R PGGSSGG
Sbjct: 133 ANPWDLERVPGGSSGG 148
>sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcoides
burtonii (strain DSM 6242) GN=gatA PE=3 SV=1
Length = 475
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
GL+ + L+G DA +++ L+EAGA+ + TN+ E T + G T+NP+
Sbjct: 76 GLATTCSSKILEGYVPPYDAHVIERLKEAGAVIIGKTNMDEFAMGTSTESSCYGVTLNPW 135
Query: 69 DFSRTPGGSSGG 80
D R PGGSSGG
Sbjct: 136 DHERVPGGSSGG 147
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatA PE=3 SV=1
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELC--TSWETTNYITG 62
+ V GL N+ G+ L+G +A +++ L AGA+ L TN+ E +S ET+++ G
Sbjct: 73 ISVVGLPNSCGSKILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEFAMGSSTETSHF--G 130
Query: 63 KTVNPYDFSRTPGGSSGG 80
T NP+D R PGGSSGG
Sbjct: 131 PTANPWDLERVPGGSSGG 148
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1
Length = 475
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ V GL N+ G+ L+ +A +++ L AGA+ L TN+ E T G T
Sbjct: 72 ISVVGLPNSCGSKILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEFAMGSSTETSYFGPT 131
Query: 65 VNPYDFSRTPGGSSGG 80
NP+D R PGGSSGG
Sbjct: 132 ANPWDLERVPGGSSGG 147
>sp|Q1IUE4|GATA_KORVE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Koribacter
versatilis (strain Ellin345) GN=gatA PE=3 SV=1
Length = 480
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 4 MVFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGK 63
++ G+ G+ L+ A DA +V+ L AGA+ L TN E N G
Sbjct: 81 VISTKGVRTTAGSKILEEFIAPYDATVVQKLEAAGAVILGKTNCDEFAMGSSNENSAYGP 140
Query: 64 TVNPYDFSRTPGGSSGG 80
NP D SR PGGSSGG
Sbjct: 141 VRNPRDKSRVPGGSSGG 157
>sp|A7I1S8|GATA_CAMHC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter
hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /
CH001A) GN=gatA PE=3 SV=1
Length = 452
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
L+G A DA ++ LR AG P TN+ E T + GKT+NP D+SR P
Sbjct: 73 LQGYVAPYDATVITKLRSAGFAPFGRTNMDEFAMGSTTESSFYGKTLNPTDYSRVP 128
>sp|Q6NHQ1|GATA_CORDI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype
gravis) GN=gatA PE=3 SV=1
Length = 494
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 5 VFVDGLSNATGALK-LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGK 63
VFV + T A K L+G A DA + K +REAG L TN+ E T N G
Sbjct: 90 VFVTTDAPTTCASKMLEGYVAPYDATVTKKIREAGIPILGKTNMDEFAMGSSTENSAYGP 149
Query: 64 TVNPYDFSRTP 74
T+NP+D RTP
Sbjct: 150 TLNPWDIERTP 160
>sp|C1D1L2|GATA_DEIDV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA
PE=3 SV=1
Length = 487
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
V G G+ L + A + L +AGA+ + N+ E T + +G T+N
Sbjct: 80 VSGTRTTCGSRILATYVSPYTATAAQRLIDAGAVIVGKANMDEFAMGSSTESSASGPTLN 139
Query: 67 PYDFSRTPGGSSGGEVL 83
P+D SR PGGSSGG +
Sbjct: 140 PWDLSRVPGGSSGGSAV 156
>sp|B2S4Q7|GATA_TREPS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum
subsp. pallidum (strain SS14) GN=gatA PE=3 SV=1
Length = 506
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 34/70 (48%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ V G G+ L +A DA +V LR AGAIPL TN+ E T + G T
Sbjct: 100 ISVKGKHCTCGSKLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFAMGSSTEYSVYGPT 159
Query: 65 VNPYDFSRTP 74
NP D SRT
Sbjct: 160 RNPRDRSRTS 169
>sp|O83983|GATA_TREPA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum
(strain Nichols) GN=gatA PE=3 SV=1
Length = 506
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 34/70 (48%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ V G G+ L +A DA +V LR AGAIPL TN+ E T + G T
Sbjct: 100 ISVKGKHCTCGSKLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFAMGSSTEYSVYGPT 159
Query: 65 VNPYDFSRTP 74
NP D SRT
Sbjct: 160 RNPRDRSRTS 169
>sp|A0LSR0|GATA_ACIC1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus
cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3
SV=1
Length = 505
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G+ G+ L+G DA +V+ +R+AG + L TN+ E T N G T NP+
Sbjct: 87 GMPTTCGSKILEGWIPPYDATVVQKIRDAGIVILGKTNMDEFAMGSSTENSAFGPTRNPW 146
Query: 69 DFSRTP 74
D SR P
Sbjct: 147 DLSRIP 152
>sp|Q9TUI8|FAAH1_PIG Fatty-acid amide hydrolase 1 OS=Sus scrofa GN=FAAH PE=1 SV=1
Length = 579
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G + G + +G A D +V++L+ GA+P +TNVP+ S++ +N + G+T NP+
Sbjct: 149 GHDSTLGLSRNQGTPAECDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTTNPW 208
>sp|Q12559|AMDS_ASPOR Acetamidase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=amdS PE=3 SV=2
Length = 545
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
V G + G++ + D+ + +LR+AGA+ L T+VP+ ET N I G+T N
Sbjct: 135 VKGTETCMAYISWLGKRDTSDSILTALLRKAGAVFLVKTSVPQTLMVCETVNNIIGRTSN 194
Query: 67 PYDFS 71
P + +
Sbjct: 195 PRNLN 199
>sp|O00519|FAAH1_HUMAN Fatty-acid amide hydrolase 1 OS=Homo sapiens GN=FAAH PE=1 SV=2
Length = 579
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 20 KGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
+G A D+ +V +L+ GA+P +TNVP+ S++ +N + G+TVNP+
Sbjct: 160 EGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPW 208
>sp|A6Q4I0|GATA_NITSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitratiruptor sp.
(strain SB155-2) GN=gatA PE=3 SV=1
Length = 442
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ VDG + LKG A DA +++ LR G P TN+ E T GKT
Sbjct: 53 IQVDGWEVTCASKILKGYIAPYDATVIQKLRANGLAPFGRTNMDEFAMGSTTETSCYGKT 112
Query: 65 VNPYDFSRTP 74
+NP D SR P
Sbjct: 113 LNPKDTSRVP 122
>sp|O08914|FAAH1_MOUSE Fatty-acid amide hydrolase 1 OS=Mus musculus GN=Faah PE=2 SV=1
Length = 579
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 20 KGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
+G + D +V++L+ GA+P +TNVP+ S++ +N + G+T+NP+
Sbjct: 160 EGVTSESDCVVVQVLKLQGAVPFVHTNVPQSMLSYDCSNPLFGQTMNPW 208
>sp|P59385|HYIN_BRAJA Indoleacetamide hydrolase OS=Bradyrhizobium japonicum (strain USDA
110) GN=bam PE=3 SV=1
Length = 524
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 8 DGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNP 67
+G N G K A DAP+V+ L++AGAI + TN PE T N + G T+NP
Sbjct: 139 EGRPNFNGVPANKDYIAPSDAPVVRNLKKAGAIVIGLTNTPEFSFRGFTDNPLHGLTLNP 198
Query: 68 YD 69
+D
Sbjct: 199 WD 200
>sp|P97612|FAAH1_RAT Fatty-acid amide hydrolase 1 OS=Rattus norvegicus GN=Faah PE=1 SV=1
Length = 579
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 20 KGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
+G + D +V++L+ GA+P +TNVP+ S++ +N + G+T+NP+
Sbjct: 160 EGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPW 208
>sp|Q6AEE8|GATA_LEIXX Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=gatA PE=3 SV=1
Length = 515
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 10 LSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYD 69
+ + +G+ L+G DA +V+ LREA +PL TN+ E T + G T NP+D
Sbjct: 88 MPSTSGSKILEGWLPPYDATVVRKLREADLVPLGKTNMDEFAMGSSTEHSAYGPTRNPWD 147
Query: 70 FSRTP 74
R P
Sbjct: 148 LERIP 152
>sp|Q8FPZ0|GATA_COREF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM
11189 / NBRC 100395) GN=gatA PE=3 SV=1
Length = 497
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 3 GMVFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITG 62
+V D + A + L+G + DA + + LREAG L TN+ E T N G
Sbjct: 93 ALVTTDAPTTAASKI-LEGYMSPYDATVTRKLREAGIPILGKTNMDEFAMGSSTENSAYG 151
Query: 63 KTVNPYDFSRTP 74
T NP+D RTP
Sbjct: 152 ATRNPWDLERTP 163
>sp|A8M5E6|GATA_SALAI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora
arenicola (strain CNS-205) GN=gatA PE=3 SV=1
Length = 491
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G+ G+ L G + D+ IV+ LR AG + L TN+ E T G T NP+
Sbjct: 87 GIPTTAGSRILAGWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPW 146
Query: 69 DFSRTP 74
D SR P
Sbjct: 147 DLSRIP 152
>sp|O28325|Y1954_ARCFU Putative amidase AF_1954 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1954 PE=3 SV=1
Length = 453
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 25 SEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRT 73
EDA +V+ L++AGA+ + TN+PE T N + G T NP+D SRT
Sbjct: 90 EEDAVLVERLKKAGAVIIGKTNMPEFGLIAYTDNPMFGPTRNPWDLSRT 138
>sp|P19922|HYIN_BRAJP Indoleacetamide hydrolase OS=Bradyrhizobium japonicum GN=bam PE=3
SV=1
Length = 465
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 4 MVFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGK 63
M +G N G K A D+P+V L++AGAI + TN PE T N + G
Sbjct: 76 MSTTEGRPNFNGVPANKDFVAPSDSPVVHNLKKAGAIVIGLTNTPEFSFRGFTDNPLHGL 135
Query: 64 TVNPYD 69
T+NP+D
Sbjct: 136 TLNPWD 141
>sp|P08158|AMDS_EMENI Acetamidase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=amdS PE=2 SV=1
Length = 548
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 7 VDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVN 66
V G + G + + D+ + +LR+AGA+ T+VP+ ET N I G+TVN
Sbjct: 134 VKGYETSMGYISWLNKYDEGDSVLTTMLRKAGAVFYVKTSVPQTLMVCETVNNIIGRTVN 193
Query: 67 P 67
P
Sbjct: 194 P 194
>sp|Q891I1|GATA_CLOTE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani
(strain Massachusetts / E88) GN=gatA PE=3 SV=1
Length = 485
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 5 VFVDGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKT 64
+ V G+ N + L+G K+ DA +++ ++ I L N+ E T N KT
Sbjct: 82 ISVKGMQNTCASKMLEGYKSPYDAHVIEKIKNEDGIILGKVNMDEFAMGSSTENSAYKKT 141
Query: 65 VNPYDFSRTP 74
NP+D R P
Sbjct: 142 RNPWDLDRVP 151
>sp|P63492|AMIB2_MYCTU Putative amidase AmiB2 OS=Mycobacterium tuberculosis GN=amiB2 PE=3
SV=1
Length = 462
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 21 GRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTPG 75
G A+ DA +V+ LR AGA+ + TNVPEL T + G T NP+ +RTPG
Sbjct: 99 GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWCLNRTPG 153
>sp|P63493|AMIB2_MYCBO Putative amidase AmiB2 OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=amiB2 PE=3 SV=1
Length = 462
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 21 GRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTPG 75
G A+ DA +V+ LR AGA+ + TNVPEL T + G T NP+ +RTPG
Sbjct: 99 GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWCLNRTPG 153
>sp|Q4JUM4|GATA_CORJK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
jeikeium (strain K411) GN=gatA PE=3 SV=1
Length = 500
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 27/56 (48%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
L+G + DA + LR AG L TN+ E T N G T NPYD RTP
Sbjct: 110 LEGYMSPYDATVTMRLRAAGIPILGKTNMDEFAMGSSTENSAYGATKNPYDLERTP 165
>sp|B6U151|GATA_MAIZE Glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial OS=Zea mays GN=GATA PE=2
SV=1
Length = 543
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 10 LSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYD 69
+ + G+ L G + + DA V+ LREAGAI L TN+ E T T NP+D
Sbjct: 129 MPSTGGSRILDGYRPAYDATAVRRLREAGAIVLGKTNLDEFGMGSTTEGSAFQVTTNPWD 188
Query: 70 FSRTP 74
SR P
Sbjct: 189 DSRVP 193
>sp|A5WCI2|GATA_PSYWF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter sp.
(strain PRwf-1) GN=gatA PE=3 SV=1
Length = 499
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
GL +G+ L + DA IV +REAGA+ L N+ E + + G NP+
Sbjct: 86 GLLTTSGSKILHNFVSPYDATIVSNIREAGAVCLGKLNMDEFAMGSDNESSYYGAVHNPW 145
Query: 69 DFSRTP 74
D SR P
Sbjct: 146 DLSRVP 151
>sp|A0LP22|GATA_SYNFM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1
Length = 486
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 27 DAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
D ++ LREAGAI L TN+ E T N G T NP+D R P
Sbjct: 103 DGTVIARLREAGAIFLGKTNMDEFAMGSSTENSAYGVTRNPWDRERVP 150
>sp|Q2LXM9|GATA_SYNAS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus
aciditrophicus (strain SB) GN=gatA PE=3 SV=1
Length = 485
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G+ G+L L DA +V LREAGA+ TN+ E T G T NP+
Sbjct: 85 GVRTTCGSLILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFTRNPW 144
Query: 69 DFSRTP 74
D R P
Sbjct: 145 DLERIP 150
>sp|Q47SC3|GATA_THEFY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermobifida fusca
(strain YX) GN=gatA PE=3 SV=1
Length = 498
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
L+G ++ DA + + LR+AG + L TN+ E T N G T NP+D R P
Sbjct: 97 LEGWQSPYDATVTERLRDAGLVILGKTNLDEFAMGSSTENSAYGPTRNPWDTDRVP 152
>sp|A6TTJ8|GATA_ALKMQ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus
metalliredigens (strain QYMF) GN=gatA PE=3 SV=1
Length = 491
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 27 DAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
DA IVK LR AGAI + TN+ E T N T NP+D ++ P
Sbjct: 104 DATIVKKLRAAGAIIIGKTNMDEFAMGSSTENSAFKVTKNPWDLTKVP 151
>sp|Q2FQM9|GATA_METHJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1
Length = 431
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G+ + LKG DA +V +L+ AGA + TN+ E T N G T+NP
Sbjct: 44 GIETTCASKILKGYIPPYDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPL 103
Query: 69 DFSRTP 74
D R P
Sbjct: 104 DHQRVP 109
>sp|A0RNK4|GATA_CAMFF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter
fetus subsp. fetus (strain 82-40) GN=gatA PE=3 SV=1
Length = 453
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
L+G A A +V+ L +AG P TN+ E T + GKT+NP D +R P
Sbjct: 73 LQGYVAPYHATVVEKLLKAGLAPFGRTNMDEFAMGSTTESSFYGKTLNPLDHTRVP 128
>sp|Q8NR17|GATA_CORGL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=gatA PE=1 SV=1
Length = 497
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRT 73
L+G + DA + + +REAG L TN+ E T N G T NP+D RT
Sbjct: 108 LEGYMSPYDATVTRKIREAGIPILGKTNMDEFAMGSSTENSAYGPTHNPWDLERT 162
>sp|A4XQK6|GATA_PSEMY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
mendocina (strain ymp) GN=gatA PE=3 SV=1
Length = 483
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 8 DGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELC--TSWETTNYITGKTV 65
+G+ + G+ L G KA DA +V+ L+ AG + L N+ E ++ E+++Y G
Sbjct: 82 NGVLTSCGSKILTGFKAPYDATVVEKLKAAGTVTLGKLNMDEFAMGSANESSHY--GAVK 139
Query: 66 NPYDFSRTP 74
NP+D SR P
Sbjct: 140 NPWDTSRVP 148
>sp|Q82JL0|GATA_STRAW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces
avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /
NCIMB 12804 / NRRL 8165 / MA-4680) GN=gatA PE=3 SV=1
Length = 501
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 8 DGLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNP 67
+G+ G+ L+G DA + K L+ A + L TN+ E T N G T NP
Sbjct: 90 EGIPTTVGSKILEGWIPPYDATLTKKLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNP 149
Query: 68 YDFSRTP 74
+D SR P
Sbjct: 150 WDLSRIP 156
>sp|A4X490|GATA_SALTO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora
tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
GN=gatA PE=3 SV=1
Length = 491
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 9 GLSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPY 68
G+ G+ L + D+ IV+ LR AG + L TN+ E T G T NP+
Sbjct: 87 GVPTTAGSKILADWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPW 146
Query: 69 DFSRTP 74
D SR P
Sbjct: 147 DLSRIP 152
>sp|A4QDK8|GATA_CORGB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
glutamicum (strain R) GN=gatA PE=3 SV=1
Length = 497
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 19 LKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRT 73
L+G + DA + + +REAG L TN+ E T N G T NP+D RT
Sbjct: 108 LEGYMSPYDATVTRKIREAGIPILGKTNMDEFAMGSSTENSAYGPTHNPWDLERT 162
>sp|A0L5G0|GATA_MAGSM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Magnetococcus sp.
(strain MC-1) GN=gatA PE=3 SV=1
Length = 485
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 27 DAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYDFSRTP 74
DA I LR+AGA+ L TN+ E T G + NP+D RTP
Sbjct: 103 DATITTHLRQAGAVILGKTNLDEFAMGSSTETSYFGASRNPWDTQRTP 150
>sp|Q7X8Z8|GATA_ORYSJ Glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
japonica GN=GATA PE=3 SV=3
Length = 543
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 10 LSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYD 69
+ + G+ L G + + DA V+ LREAGAI + TN+ E T T NP+D
Sbjct: 131 MPSTGGSRILDGYQPAYDATAVRRLREAGAIVVGKTNLDEFGMGSTTEGSGFQVTTNPWD 190
Query: 70 FSRTP 74
SR P
Sbjct: 191 DSRVP 195
>sp|Q25A68|GATA_ORYSI Glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
indica GN=GATA PE=3 SV=1
Length = 543
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 10 LSNATGALKLKGRKASEDAPIVKILREAGAIPLCNTNVPELCTSWETTNYITGKTVNPYD 69
+ + G+ L G + + DA V+ LREAGAI + TN+ E T T NP+D
Sbjct: 131 MPSTGGSRILDGYQPAYDATAVRRLREAGAIVVGKTNLDEFGMGSTTEGSGFQVTTNPWD 190
Query: 70 FSRTP 74
SR P
Sbjct: 191 DSRVP 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,047,427
Number of Sequences: 539616
Number of extensions: 1321010
Number of successful extensions: 2863
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 2305
Number of HSP's gapped (non-prelim): 583
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)