Query psy17801
Match_columns 97
No_of_seqs 46 out of 48
Neff 2.1
Searched_HMMs 29240
Date Fri Aug 16 23:27:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2g6q_A Inhibitor of growth pro 69.3 1.2 4.2E-05 27.0 0.5 10 46-58 34-43 (62)
2 1pnh_A Scorpion toxin; NMR {An 67.5 3.1 0.00011 23.8 1.9 24 30-62 4-27 (31)
3 2e6q_A Obscurin-like protein 1 66.4 1.6 5.3E-05 28.1 0.5 11 42-52 34-44 (112)
4 1yym_M F23, scorpion-toxin mim 62.0 5.6 0.00019 22.1 2.2 24 30-62 2-25 (27)
5 3rsn_A SET1/ASH2 histone methy 57.0 7 0.00024 28.7 2.6 33 46-78 27-60 (177)
6 4hwu_A Fibroblast growth facto 56.4 3.9 0.00013 23.1 1.0 11 42-52 27-37 (95)
7 2vnf_A ING 4, P29ING4, inhibit 56.2 3 0.0001 24.8 0.5 8 46-53 33-40 (60)
8 2edh_A Obscurin; structural ge 55.1 3.3 0.00011 24.2 0.5 10 43-52 46-55 (113)
9 3r08_E T-cell surface glycopro 54.5 3.8 0.00013 25.5 0.8 15 38-52 21-35 (82)
10 1jbj_A CD3 epsilon and gamma e 53.4 3.8 0.00013 26.2 0.6 11 42-52 25-35 (186)
11 1we9_A PHD finger family prote 50.4 4.3 0.00015 23.6 0.5 28 47-77 30-58 (64)
12 2dm7_A KIAA1556 protein; beta- 49.3 4.5 0.00016 23.3 0.5 11 42-52 34-44 (108)
13 1sy6_A T-cell surface glycopro 48.2 6.2 0.00021 25.8 1.0 11 42-52 28-38 (204)
14 3c6w_A P28ING5, inhibitor of g 46.2 5.4 0.00019 23.8 0.5 8 46-53 32-39 (59)
15 2jmi_A Protein YNG1, ING1 homo 44.5 5.2 0.00018 26.2 0.2 8 46-53 49-56 (90)
16 2kgg_A Histone demethylase jar 43.7 6.4 0.00022 22.5 0.5 11 47-60 27-37 (52)
17 2xb1_A Pygopus homolog 2, B-ce 43.2 6.6 0.00023 25.7 0.6 28 47-77 28-61 (105)
18 3bfo_A Mucosa-associated lymph 42.9 7.8 0.00027 21.8 0.8 10 43-52 32-41 (91)
19 2cr6_A KIAA1556 protein, obscu 41.4 7 0.00024 23.1 0.4 9 44-52 43-51 (115)
20 2edk_A Myosin-binding protein 41.2 7.7 0.00026 22.2 0.6 9 44-52 37-45 (101)
21 3ry4_A Low affinity immunoglob 41.0 8.7 0.0003 23.1 0.9 10 43-52 34-43 (170)
22 1wen_A Inhibitor of growth fam 40.8 6.7 0.00023 24.2 0.3 8 46-53 39-46 (71)
23 1waa_A Titin; metal binding pr 39.9 9.4 0.00032 22.5 0.9 9 44-52 34-42 (93)
24 2rsd_A E3 SUMO-protein ligase 39.4 9 0.00031 22.9 0.7 7 47-53 34-40 (68)
25 2eny_A Obscurin; beta-sandwich 39.2 6.1 0.00021 23.4 -0.1 8 45-52 40-47 (104)
26 1wee_A PHD finger family prote 39.1 9.2 0.00031 23.0 0.7 8 46-53 38-45 (72)
27 1he7_A High affinity nerve gro 38.1 13 0.00043 24.6 1.4 15 38-52 22-38 (126)
28 3i84_A Cervical EMMPRIN; CD147 37.8 11 0.00037 24.8 1.0 11 42-52 37-47 (98)
29 3rbs_A Myomesin-1; immunoglobu 37.8 9.4 0.00032 25.2 0.7 16 37-52 137-155 (207)
30 1wem_A Death associated transc 37.3 6.4 0.00022 23.8 -0.2 10 47-59 38-47 (76)
31 2k16_A Transcription initiatio 35.0 14 0.00048 22.0 1.1 26 47-75 41-66 (75)
32 2vpb_A Hpygo1, pygopus homolog 34.7 7.4 0.00025 23.7 -0.2 11 47-60 33-43 (65)
33 2r15_A Myomesin-1; sarcomeric 34.7 13 0.00044 22.9 0.9 10 43-52 32-41 (212)
34 1x4i_A Inhibitor of growth pro 34.5 6.7 0.00023 24.1 -0.4 10 46-58 29-38 (70)
35 3o7a_A PHD finger protein 13 v 34.1 11 0.00038 21.4 0.5 7 47-53 26-32 (52)
36 3mj8_L Stimulatory hamster ant 33.9 9.7 0.00033 23.8 0.2 15 38-52 136-154 (213)
37 1weu_A Inhibitor of growth fam 32.7 9.3 0.00032 25.0 0.0 27 46-77 59-85 (91)
38 3s96_B 3B5H10 FAB light chain; 32.2 11 0.00037 23.6 0.2 15 38-52 143-161 (218)
39 1f2q_A High affinity immunoglo 32.1 14 0.00049 22.6 0.8 8 45-52 36-43 (176)
40 1bus_A Proteinase inhibitor II 31.9 20 0.00067 21.4 1.4 24 58-89 4-27 (57)
41 1s8k_A Toxin BMKK4; alpha/beta 31.6 9.6 0.00033 21.7 -0.1 20 26-45 2-21 (31)
42 3nl4_L Antigen binding fragmen 31.3 11 0.00039 23.5 0.2 15 38-52 136-153 (213)
43 2bk8_A Connectin, M1, titin he 30.6 15 0.00052 20.6 0.7 10 43-52 31-40 (97)
44 3kvq_A Vascular endothelial gr 30.2 16 0.00053 20.7 0.7 10 43-52 39-48 (108)
45 2eo9_A Roundabout homolog 1; b 30.2 19 0.00063 21.0 1.1 10 43-52 37-46 (118)
46 3lqh_A Histone-lysine N-methyl 30.2 12 0.00042 26.8 0.3 35 47-84 29-70 (183)
47 1wep_A PHF8; structural genomi 30.2 9.8 0.00033 23.2 -0.2 29 47-78 35-64 (79)
48 1wew_A DNA-binding family prot 29.9 10 0.00034 23.3 -0.2 6 47-52 40-45 (78)
49 3so5_A LIG-3, leucine-rich rep 29.6 13 0.00044 20.5 0.2 25 14-52 26-50 (112)
50 2lvc_A Obscurin-like protein 1 29.5 19 0.00064 21.4 1.0 9 44-52 35-43 (91)
51 2o26_X MAST/stem cell growth f 29.2 15 0.00052 24.0 0.6 8 45-52 39-46 (290)
52 3tv3_L PGT128 light chain, IG 29.2 13 0.00044 23.3 0.2 9 44-52 143-151 (211)
53 1g1c_A Immunoglobulin-like dom 29.0 24 0.00083 19.5 1.4 23 14-52 21-43 (99)
54 1nfd_E H57 FAB; complex (immun 28.8 11 0.00038 23.6 -0.1 16 37-52 134-153 (212)
55 2if7_A SLAM family member 6; N 28.7 17 0.00057 23.2 0.7 16 37-52 130-148 (193)
56 4hwn_A FC receptor-like A; FCR 28.3 15 0.00051 22.1 0.4 8 46-53 44-51 (108)
57 2ens_A Advanced glycosylation 28.1 14 0.00049 20.8 0.3 10 43-52 39-48 (96)
58 3knb_B Obscurin-like protein 1 28.0 22 0.00075 21.4 1.1 10 43-52 42-51 (107)
59 3kqi_A GRC5, PHD finger protei 27.3 12 0.0004 22.7 -0.2 8 47-54 33-40 (75)
60 1fnl_A Low affinity immunoglob 27.2 19 0.00066 22.1 0.8 9 44-52 119-127 (175)
61 2yuv_A Myosin-binding protein 27.0 26 0.0009 19.8 1.3 22 14-52 24-45 (100)
62 2ri7_A Nucleosome-remodeling f 26.9 12 0.00042 25.1 -0.2 28 47-77 31-59 (174)
63 1xiw_B T-cell surface glycopro 26.9 21 0.00072 22.2 0.9 10 43-52 17-26 (79)
64 2va4_A NCAM2, N-CAM 2, neural 26.6 62 0.0021 19.3 3.0 24 13-52 19-42 (192)
65 3o70_A PHD finger protein 13; 26.5 18 0.00061 22.0 0.5 7 47-53 41-47 (68)
66 1hng_A CD2; T lymphocyte adhes 26.5 21 0.00071 22.6 0.8 17 36-52 115-133 (176)
67 1rhf_A Tyrosine-protein kinase 26.5 20 0.0007 21.6 0.8 8 45-52 130-137 (182)
68 1wwb_X Protein (brain derived 26.4 28 0.00095 20.3 1.4 15 38-52 23-39 (103)
69 3d9a_L Light chain of hyhel10 26.4 16 0.00054 22.8 0.2 8 45-52 145-152 (213)
70 2yuz_A Myosin-binding protein 26.3 24 0.00081 20.8 1.0 9 44-52 35-43 (100)
71 3sob_L Antibody light chain; b 26.1 16 0.00054 23.0 0.2 15 38-52 157-175 (237)
72 1lk3_L 9D7 light chain; antige 26.0 13 0.00044 23.3 -0.2 8 45-52 144-151 (210)
73 2wng_A Tyrosine-protein phosph 25.7 16 0.00056 24.6 0.2 16 37-52 241-260 (327)
74 1ccz_A Protein (CD58); LFA-3, 25.5 22 0.00076 22.6 0.9 18 35-52 109-128 (171)
75 2k1m_A Myosin-binding protein 25.5 25 0.00085 19.8 1.0 10 43-52 36-45 (95)
76 3knb_A Titin; IG-like, titin, 25.4 30 0.001 20.3 1.4 10 43-52 34-43 (100)
77 2j6e_L IGM, FAB light chain; a 24.9 21 0.00073 22.5 0.7 16 37-52 156-175 (234)
78 1x44_A Myosin-binding protein 24.7 24 0.00083 20.1 0.9 9 44-52 36-44 (103)
79 1itb_B Type 1 interleukin-1 re 24.5 18 0.00063 23.9 0.3 10 43-52 35-44 (315)
80 2cqv_A MLCK, myosin light chai 24.1 24 0.00081 20.4 0.7 23 14-52 23-45 (114)
81 4bbq_A Lysine-specific demethy 24.1 20 0.00069 22.7 0.4 31 46-76 82-113 (117)
82 3cx2_A Myosin-binding protein 23.8 24 0.00083 20.4 0.7 9 44-52 37-45 (108)
83 2lu7_A Obscurin-like protein 1 23.7 25 0.00087 20.5 0.8 9 44-52 25-33 (84)
84 2cry_A KIN of IRRE-like protei 23.6 23 0.00078 20.8 0.6 7 46-52 46-52 (122)
85 1q0x_L FAB 9B1, light chain; a 23.5 19 0.00066 22.5 0.2 8 45-52 148-155 (212)
86 2kdg_A Myotilin; immonoglobuli 23.5 35 0.0012 18.8 1.4 10 43-52 34-43 (100)
87 1wwc_A Protein (NT-3 growth fa 23.3 34 0.0012 19.9 1.4 15 38-52 27-43 (118)
88 2cpc_A KIAA0657 protein; immun 23.3 30 0.001 19.7 1.1 10 43-52 41-50 (113)
89 2dm2_A Palladin; beta-sandwich 23.2 27 0.00092 20.0 0.8 10 43-52 37-46 (110)
90 3caf_A Fibroblast growth facto 23.1 36 0.0012 18.9 1.4 10 43-52 37-46 (100)
91 2y23_A Myomesin; structural pr 23.0 25 0.00085 22.9 0.7 15 38-52 243-260 (312)
92 1c1e_H Catalytic antibody 1E9 22.2 17 0.00058 23.0 -0.2 8 45-52 157-164 (219)
93 4ei6_B Vbeta16 XV19 type II na 21.9 22 0.00074 22.9 0.2 15 38-52 146-164 (245)
94 3r06_A Anti-mouse CD3epsilon a 21.7 19 0.00064 22.4 -0.1 8 45-52 145-152 (213)
95 2c5d_C AXL oncogene, tyrosine- 21.7 29 0.00099 21.2 0.8 8 45-52 138-145 (195)
96 2ckn_A Basic fibroblast growth 21.6 34 0.0012 19.2 1.1 9 44-52 38-46 (95)
97 2xzc_L FAB A.17 light chain; i 21.5 22 0.00076 22.3 0.2 16 37-52 135-154 (216)
98 2lv9_A Histone-lysine N-methyl 21.5 27 0.00092 22.3 0.6 27 46-76 49-75 (98)
99 3puc_A Titin; I-SET IG-like do 21.2 42 0.0014 18.4 1.4 23 14-52 22-44 (99)
100 1lr7_A Follistatin, FS1; hepar 21.1 23 0.00077 21.2 0.2 31 58-89 12-43 (74)
101 3qp3_A Titin; I-SET IG-like, s 21.0 42 0.0014 18.7 1.4 23 14-52 24-46 (103)
102 1u2h_A APEG-1, aortic preferen 20.9 42 0.0015 18.4 1.4 23 14-52 21-43 (99)
103 1bih_A Hemolin; insect immunit 20.9 30 0.001 23.4 0.9 10 43-52 36-45 (395)
104 1hnf_A CD2; T lymphocyte adhes 20.9 31 0.0011 22.6 0.9 19 34-52 118-138 (182)
105 2c6u_A CLEC1B protein; lectin, 20.8 90 0.0031 18.5 2.9 26 18-44 12-37 (122)
106 1l6x_A Immunoglobulin gamma-1 20.4 20 0.00068 22.8 -0.1 8 45-52 38-45 (207)
107 2v44_A NCAM2, neural cell adhe 20.3 31 0.0011 20.9 0.7 9 44-52 126-134 (189)
108 2rcj_C Light chain; immunoglob 20.3 27 0.00092 25.3 0.5 16 37-52 340-361 (523)
109 1nub_A Basement membrane prote 20.3 28 0.00097 25.3 0.6 30 58-89 14-48 (229)
110 3q5y_A TCR N15 beta; IG, T cel 20.3 24 0.00083 22.6 0.2 15 38-52 144-162 (240)
111 1gps_A Gamma-1-P thionin; plan 20.2 66 0.0023 18.7 2.1 22 24-45 10-31 (47)
No 1
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=69.34 E-value=1.2 Score=26.96 Aligned_cols=10 Identities=40% Similarity=1.384 Sum_probs=7.6
Q ss_pred eeeeecceecccC
Q psy17801 46 VRWFHDGCCECIG 58 (97)
Q Consensus 46 YRWFHdGCCECVG 58 (97)
++|||-. |||
T Consensus 34 ~~WfH~~---Cvg 43 (62)
T 2g6q_A 34 IEWFHFS---CVS 43 (62)
T ss_dssp SCEEETG---GGT
T ss_pred cccEecc---cCC
Confidence 6999985 555
No 2
>1pnh_A Scorpion toxin; NMR {Androctonus mauretanicus mauretanicus} SCOP: g.3.7.2 PDB: 1scy_A 2ky3_A
Probab=67.45 E-value=3.1 Score=23.76 Aligned_cols=24 Identities=42% Similarity=0.981 Sum_probs=18.8
Q ss_pred ChHHHHHHHhhhCCCeeeeeecceecccCcccc
Q psy17801 30 SWSKCKTSCRSMGSTSVRWFHDGCCECIGDTCI 62 (97)
Q Consensus 30 S~nkCr~sC~SmGAssYRWFHdGCCECVG~~Cl 62 (97)
.+.+|.-||.|+|--. .|||..|.
T Consensus 4 nlrrc~lscrslgllg---------kcig~~c~ 27 (31)
T 1pnh_A 4 NLRRCQLSCRSLGLLG---------KCIGVKCE 27 (31)
T ss_dssp CHHHHHHHHHTTSSEE---------EEETTEEE
T ss_pred cchhhhhhhhhhhhhh---------hhhCCeeE
Confidence 3689999999999754 57777774
No 3
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.40 E-value=1.6 Score=28.06 Aligned_cols=11 Identities=27% Similarity=0.646 Sum_probs=9.2
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
|...++||+||
T Consensus 34 ~~p~v~W~knG 44 (112)
T 2e6q_A 34 TIIQGTWFLNG 44 (112)
T ss_dssp SCCCCEEEESS
T ss_pred CCCeEEEEECC
Confidence 35679999998
No 4
>1yym_M F23, scorpion-toxin mimic of CD4, exterior membrane glycoprotein(GP120); HIV-1, YU2, CD4 mimic, antibody, protein-immune system complex; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: k.23.1.2 PDB: 1yyl_M* 2i60_M* 2i5y_M* 1d5q_A
Probab=61.98 E-value=5.6 Score=22.13 Aligned_cols=24 Identities=29% Similarity=0.812 Sum_probs=18.9
Q ss_pred ChHHHHHHHhhhCCCeeeeeecceecccCcccc
Q psy17801 30 SWSKCKTSCRSMGSTSVRWFHDGCCECIGDTCI 62 (97)
Q Consensus 30 S~nkCr~sC~SmGAssYRWFHdGCCECVG~~Cl 62 (97)
..++|.-+|.|+|--. .|+|..|.
T Consensus 2 nlrrc~lscrslgllg---------kcig~~c~ 25 (27)
T 1yym_M 2 NLHFCQLRCKSLGLLG---------KCAGSFCA 25 (27)
T ss_dssp CHHHHHHHHHTTTCCE---------EEETTEEE
T ss_pred Cceeeeeechhhhhhh---------hhcCceEe
Confidence 4678999999999754 57787774
No 5
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=57.00 E-value=7 Score=28.72 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=22.2
Q ss_pred eeeeecceecccCccccccccc-ccccCCCCCCC
Q psy17801 46 VRWFHDGCCECIGDTCINYGIN-QSRHGVNARPR 78 (97)
Q Consensus 46 YRWFHdGCCECVG~~ClnYG~n-esrC~~Cpe~~ 78 (97)
.+|||-.|-++-...++.+=.+ .-.|+.|-...
T Consensus 27 ~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 27 TKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp CCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred cceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 4799999999766555433222 23699997654
No 6
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=56.37 E-value=3.9 Score=23.14 Aligned_cols=11 Identities=27% Similarity=0.836 Sum_probs=9.1
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
|...+.|++||
T Consensus 27 ~~p~v~W~k~g 37 (95)
T 4hwu_A 27 DAAVISWTKDG 37 (95)
T ss_dssp TTCEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 45799999986
No 7
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=56.24 E-value=3 Score=24.83 Aligned_cols=8 Identities=50% Similarity=1.589 Sum_probs=6.3
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
++|||-.|
T Consensus 33 ~~wfH~~C 40 (60)
T 2vnf_A 33 IEWFHFAC 40 (60)
T ss_dssp SCEEETGG
T ss_pred CceEehhc
Confidence 48999864
No 8
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=55.14 E-value=3.3 Score=24.21 Aligned_cols=10 Identities=20% Similarity=0.684 Sum_probs=8.0
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+|+
T Consensus 46 ~p~v~W~k~~ 55 (113)
T 2edh_A 46 MAPVEWWKGH 55 (113)
T ss_dssp CCCCEEEESS
T ss_pred CCcEEEEECC
Confidence 3579999986
No 9
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=54.47 E-value=3.8 Score=25.55 Aligned_cols=15 Identities=20% Similarity=0.698 Sum_probs=12.0
Q ss_pred HhhhCCCeeeeeecc
Q psy17801 38 CRSMGSTSVRWFHDG 52 (97)
Q Consensus 38 C~SmGAssYRWFHdG 52 (97)
|...|...+.|++||
T Consensus 21 C~~~g~P~i~W~kdg 35 (82)
T 3r08_E 21 CPLDSDENLKWEKNG 35 (82)
T ss_dssp CSSCCCSSCEEEETT
T ss_pred EECCCCCcEEEEECC
Confidence 566777779999996
No 10
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=53.37 E-value=3.8 Score=26.16 Aligned_cols=11 Identities=18% Similarity=0.785 Sum_probs=8.7
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
|...++||+||
T Consensus 25 ~~~~i~W~k~g 35 (186)
T 1jbj_A 25 SDENLKWEKNG 35 (186)
T ss_dssp CCTTCEEEETT
T ss_pred CCCceEEEECC
Confidence 45569999986
No 11
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=50.39 E-value=4.3 Score=23.65 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=15.5
Q ss_pred eeeecceecccCccccccc-ccccccCCCCCC
Q psy17801 47 RWFHDGCCECIGDTCINYG-INQSRHGVNARP 77 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG-~nesrC~~Cpe~ 77 (97)
+|||.. |||-+=...- +.+-.|..|..+
T Consensus 30 ~WfH~~---Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 30 MWFHGK---CVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CEEETT---TTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCcc---ccCcChhHhcCCCcEECCCCcCc
Confidence 899985 5665432222 234556666543
No 12
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=49.32 E-value=4.5 Score=23.30 Aligned_cols=11 Identities=18% Similarity=0.386 Sum_probs=8.5
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
|...++||+++
T Consensus 34 ~~p~v~W~k~~ 44 (108)
T 2dm7_A 34 KVAPVEWKKGP 44 (108)
T ss_dssp SSCCCEEESSS
T ss_pred CCCeeEEEECC
Confidence 34689999985
No 13
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=48.21 E-value=6.2 Score=25.83 Aligned_cols=11 Identities=36% Similarity=1.129 Sum_probs=9.5
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
....|+||+||
T Consensus 28 p~~~i~W~k~g 38 (204)
T 1sy6_A 28 EAKNITWFKDG 38 (204)
T ss_dssp CSSEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 47899999987
No 14
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=46.19 E-value=5.4 Score=23.75 Aligned_cols=8 Identities=50% Similarity=1.589 Sum_probs=5.9
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
++|||-.|
T Consensus 32 ~~wfH~~C 39 (59)
T 3c6w_A 32 IEWFHFAC 39 (59)
T ss_dssp SCEEETGG
T ss_pred CCCEeccc
Confidence 37999854
No 15
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=44.48 E-value=5.2 Score=26.20 Aligned_cols=8 Identities=63% Similarity=1.788 Sum_probs=6.3
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
++|||-.|
T Consensus 49 ~eWfH~~C 56 (90)
T 2jmi_A 49 FEWFHYGC 56 (90)
T ss_dssp CSCEETTT
T ss_pred cccCcCcc
Confidence 58999864
No 16
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=43.70 E-value=6.4 Score=22.54 Aligned_cols=11 Identities=45% Similarity=1.362 Sum_probs=7.9
Q ss_pred eeeecceecccCcc
Q psy17801 47 RWFHDGCCECIGDT 60 (97)
Q Consensus 47 RWFHdGCCECVG~~ 60 (97)
+|||-. |||-+
T Consensus 27 ~WfH~~---Cvgl~ 37 (52)
T 2kgg_A 27 EWFHQV---CVGVS 37 (52)
T ss_dssp CEEETT---TTTCC
T ss_pred ccCccc---ccCCC
Confidence 899985 56643
No 17
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=43.16 E-value=6.6 Score=25.67 Aligned_cols=28 Identities=32% Similarity=0.679 Sum_probs=17.1
Q ss_pred eeeecceecccCcccccccc------cccccCCCCCC
Q psy17801 47 RWFHDGCCECIGDTCINYGI------NQSRHGVNARP 77 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG~------nesrC~~Cpe~ 77 (97)
+|||- +|||-+=..|-. .+-.|..|...
T Consensus 28 ~WfH~---~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 28 KWFHR---ECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp CEEEG---GGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred ccccc---ccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 89998 567765433322 34567777543
No 18
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=42.92 E-value=7.8 Score=21.76 Aligned_cols=10 Identities=20% Similarity=0.723 Sum_probs=8.2
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...|.||++|
T Consensus 32 ~p~i~W~~~~ 41 (91)
T 3bfo_A 32 IPHYQWFKNE 41 (91)
T ss_dssp CCEEEEEETT
T ss_pred CCEEEEEcCC
Confidence 4589999985
No 19
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.36 E-value=7 Score=23.12 Aligned_cols=9 Identities=44% Similarity=1.007 Sum_probs=7.6
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 43 p~v~W~k~g 51 (115)
T 2cr6_A 43 EPVHWFLDK 51 (115)
T ss_dssp CSCEEEESS
T ss_pred CccEEEECC
Confidence 479999986
No 20
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.22 E-value=7.7 Score=22.20 Aligned_cols=9 Identities=33% Similarity=1.025 Sum_probs=7.7
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 37 ~~v~W~k~g 45 (101)
T 2edk_A 37 AQVMWMKNG 45 (101)
T ss_dssp CCCEEEESS
T ss_pred CEEEEEECC
Confidence 578999986
No 21
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=41.02 E-value=8.7 Score=23.09 Aligned_cols=10 Identities=60% Similarity=1.497 Sum_probs=8.1
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...|+||+||
T Consensus 34 ~~~~~W~~~g 43 (170)
T 3ry4_A 34 SDSIQWFHNG 43 (170)
T ss_dssp SSCEEEEETT
T ss_pred cceEEEEECC
Confidence 4579999986
No 22
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=40.81 E-value=6.7 Score=24.21 Aligned_cols=8 Identities=50% Similarity=1.589 Sum_probs=6.0
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
++|||-.|
T Consensus 39 ~~wfH~~C 46 (71)
T 1wen_A 39 IEWFHFAC 46 (71)
T ss_dssp CCCEETTT
T ss_pred CccEeccc
Confidence 37999864
No 23
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=39.88 E-value=9.4 Score=22.47 Aligned_cols=9 Identities=22% Similarity=0.523 Sum_probs=7.6
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 34 ~~v~W~k~g 42 (93)
T 1waa_A 34 VHGQWKLKG 42 (93)
T ss_dssp CCCEEEETT
T ss_pred CeEEEEECC
Confidence 469999996
No 24
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=39.38 E-value=9 Score=22.93 Aligned_cols=7 Identities=43% Similarity=1.118 Sum_probs=5.7
Q ss_pred eeeecce
Q psy17801 47 RWFHDGC 53 (97)
Q Consensus 47 RWFHdGC 53 (97)
+|||-.|
T Consensus 34 ~W~H~~C 40 (68)
T 2rsd_A 34 VWQHLNC 40 (68)
T ss_dssp EEEETTT
T ss_pred CeEchhh
Confidence 7999865
No 25
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.17 E-value=6.1 Score=23.44 Aligned_cols=8 Identities=25% Similarity=0.646 Sum_probs=7.0
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||+||
T Consensus 40 ~v~W~k~g 47 (104)
T 2eny_A 40 PAMWTVGG 47 (104)
T ss_dssp CBCCBSSS
T ss_pred eeEEEECC
Confidence 59999997
No 26
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=39.12 E-value=9.2 Score=23.00 Aligned_cols=8 Identities=38% Similarity=1.053 Sum_probs=6.1
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
.+|||-.|
T Consensus 38 ~~W~H~~C 45 (72)
T 1wee_A 38 GVWHHTRC 45 (72)
T ss_dssp CEEEETTT
T ss_pred CCccCCee
Confidence 48999853
No 27
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=38.12 E-value=13 Score=24.61 Aligned_cols=15 Identities=33% Similarity=0.809 Sum_probs=10.5
Q ss_pred HhhhC--CCeeeeeecc
Q psy17801 38 CRSMG--STSVRWFHDG 52 (97)
Q Consensus 38 C~SmG--AssYRWFHdG 52 (97)
|+..| ...++||+||
T Consensus 22 c~v~G~P~P~I~W~knG 38 (126)
T 1he7_A 22 FSVDGQPAPSLRWLFNG 38 (126)
T ss_dssp EEECCSSCCEEEEEETT
T ss_pred EEEeeeCCCeEEEEECC
Confidence 34445 4589999997
No 28
>3i84_A Cervical EMMPRIN; CD147, dimerization, cell adhesion, beta-strand swapping; 2.00A {Homo sapiens} PDB: 3i85_A
Probab=37.84 E-value=11 Score=24.83 Aligned_cols=11 Identities=36% Similarity=0.827 Sum_probs=8.5
Q ss_pred CCCeeeeeecc
Q psy17801 42 GSTSVRWFHDG 52 (97)
Q Consensus 42 GAssYRWFHdG 52 (97)
--+.+|||+||
T Consensus 37 ~~~~~~W~kng 47 (98)
T 3i84_A 37 EVTGHRWLKGG 47 (98)
T ss_dssp CEEEEEEEETT
T ss_pred CccCCEEeECC
Confidence 34578999997
No 29
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=37.79 E-value=9.4 Score=25.16 Aligned_cols=16 Identities=25% Similarity=0.800 Sum_probs=12.7
Q ss_pred HHhhhCC---Ceeeeeecc
Q psy17801 37 SCRSMGS---TSVRWFHDG 52 (97)
Q Consensus 37 sC~SmGA---ssYRWFHdG 52 (97)
.|+..|. ..++||+||
T Consensus 137 ~C~v~g~~P~p~i~W~k~g 155 (207)
T 3rbs_A 137 KCKVANIKKETHIVWYKDE 155 (207)
T ss_dssp EEEEESCCTTCEEEEEETT
T ss_pred EEEEeCCCCCCEEEEEECC
Confidence 4667776 689999997
No 30
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=37.26 E-value=6.4 Score=23.79 Aligned_cols=10 Identities=50% Similarity=1.504 Sum_probs=7.3
Q ss_pred eeeecceecccCc
Q psy17801 47 RWFHDGCCECIGD 59 (97)
Q Consensus 47 RWFHdGCCECVG~ 59 (97)
+|||-. |||-
T Consensus 38 ~WfH~~---Cvgl 47 (76)
T 1wem_A 38 EWFHGD---CVGI 47 (76)
T ss_dssp CEEEHH---HHSC
T ss_pred CcEeCe---EEcc
Confidence 899985 5554
No 31
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=35.00 E-value=14 Score=22.03 Aligned_cols=26 Identities=23% Similarity=0.222 Sum_probs=12.8
Q ss_pred eeeecceecccCcccccccccccccCCCC
Q psy17801 47 RWFHDGCCECIGDTCINYGINQSRHGVNA 75 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG~nesrC~~Cp 75 (97)
+|||-. |+|..=..-...+-.|..|.
T Consensus 41 ~wfH~~---Cv~~~~~~~~~~~w~C~~C~ 66 (75)
T 2k16_A 41 DWYHWP---CVGIMAAPPEEMQWFCPKCA 66 (75)
T ss_dssp SEEEHH---HHTCSSCCCSSSCCCCTTTH
T ss_pred cccccc---cCCCCccCCCCCCEEChhcc
Confidence 899986 45543221112234455553
No 32
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=34.70 E-value=7.4 Score=23.68 Aligned_cols=11 Identities=55% Similarity=1.328 Sum_probs=7.9
Q ss_pred eeeecceecccCcc
Q psy17801 47 RWFHDGCCECIGDT 60 (97)
Q Consensus 47 RWFHdGCCECVG~~ 60 (97)
+|||- +|||-+
T Consensus 33 ~WfH~---~Cvglt 43 (65)
T 2vpb_A 33 KWFHR---ICTGMT 43 (65)
T ss_dssp CEEEH---HHHTCC
T ss_pred ccCch---hccCCC
Confidence 89998 556643
No 33
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=34.66 E-value=13 Score=22.88 Aligned_cols=10 Identities=40% Similarity=0.973 Sum_probs=8.4
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+||
T Consensus 32 ~~~i~W~~~g 41 (212)
T 2r15_A 32 DLKVNWSHNG 41 (212)
T ss_dssp SCEEEEEETT
T ss_pred CceEEEEECC
Confidence 5689999986
No 34
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.54 E-value=6.7 Score=24.13 Aligned_cols=10 Identities=60% Similarity=1.853 Sum_probs=7.5
Q ss_pred eeeeecceecccC
Q psy17801 46 VRWFHDGCCECIG 58 (97)
Q Consensus 46 YRWFHdGCCECVG 58 (97)
++|||-. |||
T Consensus 29 ~~WfH~~---Cvg 38 (70)
T 1x4i_A 29 IEWFHYG---CVG 38 (70)
T ss_dssp CCCEEHH---HHT
T ss_pred ccCCccc---ccc
Confidence 5899984 555
No 35
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=34.09 E-value=11 Score=21.41 Aligned_cols=7 Identities=43% Similarity=1.374 Sum_probs=5.7
Q ss_pred eeeecce
Q psy17801 47 RWFHDGC 53 (97)
Q Consensus 47 RWFHdGC 53 (97)
+|||-.|
T Consensus 26 ~W~H~~C 32 (52)
T 3o7a_A 26 TWIHLSC 32 (52)
T ss_dssp CEEETTT
T ss_pred ccccccc
Confidence 7999854
No 36
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=33.95 E-value=9.7 Score=23.78 Aligned_cols=15 Identities=40% Similarity=0.858 Sum_probs=10.5
Q ss_pred HhhhC---C-Ceeeeeecc
Q psy17801 38 CRSMG---S-TSVRWFHDG 52 (97)
Q Consensus 38 C~SmG---A-ssYRWFHdG 52 (97)
|++.| . ..+.||+||
T Consensus 136 C~~~g~~p~~~~v~W~k~g 154 (213)
T 3mj8_L 136 CMINGFYPADVAVTWEADG 154 (213)
T ss_dssp EEEEEEBSSCCEEEEEETT
T ss_pred EEeeceeCCCeEEEEEcCC
Confidence 55555 2 289999986
No 37
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=32.68 E-value=9.3 Score=25.01 Aligned_cols=27 Identities=22% Similarity=0.388 Sum_probs=14.2
Q ss_pred eeeeecceecccCcccccccccccccCCCCCC
Q psy17801 46 VRWFHDGCCECIGDTCINYGINQSRHGVNARP 77 (97)
Q Consensus 46 YRWFHdGCCECVG~~ClnYG~nesrC~~Cpe~ 77 (97)
+.|||-. |||-+=.. ..+-.|..|...
T Consensus 59 ~~WfH~~---CVgl~~~p--~g~W~Cp~C~~~ 85 (91)
T 1weu_A 59 IEWFHFA---CVGLTTKP--RGKWFCPRCSQE 85 (91)
T ss_dssp CCCCCST---TTTCSSCC--CSSCCCTTTCCC
T ss_pred CCCEecc---cCCcCcCC--CCCEECcCccCc
Confidence 4799985 45532111 123466666543
No 38
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=32.25 E-value=11 Score=23.56 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=10.7
Q ss_pred HhhhC---CC-eeeeeecc
Q psy17801 38 CRSMG---ST-SVRWFHDG 52 (97)
Q Consensus 38 C~SmG---As-sYRWFHdG 52 (97)
|.+.| .. .++||.||
T Consensus 143 C~~~g~~p~~~~v~W~k~g 161 (218)
T 3s96_B 143 CLISNFSPSGVTVAWKANG 161 (218)
T ss_dssp EEEEEEBSSCCEEEEEETT
T ss_pred EEECcccCCCeEEEEEECC
Confidence 55556 33 79999986
No 39
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=32.08 E-value=14 Score=22.61 Aligned_cols=8 Identities=63% Similarity=1.701 Sum_probs=6.9
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.|+||+|+
T Consensus 36 ~i~W~~~~ 43 (176)
T 1f2q_A 36 STKWFHNG 43 (176)
T ss_dssp CCEEEETT
T ss_pred eEEEEECC
Confidence 59999986
No 40
>1bus_A Proteinase inhibitor IIA; HET: PCA; NMR {Bos taurus} SCOP: g.68.1.1 PDB: 2bus_A*
Probab=31.87 E-value=20 Score=21.42 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=14.1
Q ss_pred CcccccccccccccCCCCCCCccccceeccCc
Q psy17801 58 GDTCINYGINQSRHGVNARPRAAVWARPVCGG 89 (97)
Q Consensus 58 G~~ClnYG~nesrC~~Cpe~~~~v~~~p~~~~ 89 (97)
-++|-.|.- ..|. ||. ...||||-
T Consensus 4 ~~~C~~~~~--~~~~-C~~-----~~~PVCGs 27 (57)
T 1bus_A 4 QVDCAEFKD--PKVY-CTR-----ESNPHCGS 27 (57)
T ss_dssp CCCCSTTCT--TTTS-CSS-----CSCCEEBS
T ss_pred cCcCCCCCC--CCCc-CCC-----CCCCcCCC
Confidence 356777762 3333 554 25799984
No 41
>1s8k_A Toxin BMKK4; alpha/beta scaffold; HET: PCA; NMR {Mesobuthus martensii}
Probab=31.59 E-value=9.6 Score=21.73 Aligned_cols=20 Identities=25% Similarity=0.551 Sum_probs=16.2
Q ss_pred ccccChHHHHHHHhhhCCCe
Q psy17801 26 STCMSWSKCKTSCRSMGSTS 45 (97)
Q Consensus 26 ~qC~S~nkCr~sC~SmGAss 45 (97)
.||.+-|.|.+.|+|.---|
T Consensus 2 t~cq~~~dcq~yc~s~~~c~ 21 (31)
T 1s8k_A 2 TQCQSVRDCQQYCLTPDRCS 21 (31)
T ss_dssp CSCSSHHHHHHHCSSEEEEE
T ss_pred ccchhhHHHHHHcCCccccc
Confidence 48999999999999865433
No 42
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=31.33 E-value=11 Score=23.48 Aligned_cols=15 Identities=33% Similarity=0.714 Sum_probs=10.8
Q ss_pred HhhhC---CCeeeeeecc
Q psy17801 38 CRSMG---STSVRWFHDG 52 (97)
Q Consensus 38 C~SmG---AssYRWFHdG 52 (97)
|.+.| ...++||+||
T Consensus 136 C~~~g~~P~~~v~W~k~g 153 (213)
T 3nl4_L 136 CVANKYFPDVTVTWEVDG 153 (213)
T ss_dssp EEEEEEBSCCEEEEEETT
T ss_pred EEEecccCCcEEEEEeCC
Confidence 44445 5789999986
No 43
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=30.61 E-value=15 Score=20.57 Aligned_cols=10 Identities=40% Similarity=0.803 Sum_probs=8.0
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+++
T Consensus 31 ~~~v~W~~~~ 40 (97)
T 2bk8_A 31 STQVTWYFGV 40 (97)
T ss_dssp TCEEEEEETT
T ss_pred CCEEEEEECC
Confidence 3579999985
No 44
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=30.25 E-value=16 Score=20.67 Aligned_cols=10 Identities=30% Similarity=0.966 Sum_probs=7.7
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+++
T Consensus 39 ~p~i~W~~~~ 48 (108)
T 3kvq_A 39 PPQIMWFKDN 48 (108)
T ss_dssp -CCEEEEESS
T ss_pred CCeEEEEECC
Confidence 4579999987
No 45
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.23 E-value=19 Score=21.03 Aligned_cols=10 Identities=30% Similarity=0.813 Sum_probs=7.9
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+||
T Consensus 37 ~p~i~W~k~g 46 (118)
T 2eo9_A 37 VPTILWRKDG 46 (118)
T ss_dssp CCEEEEEESS
T ss_pred CCEEEEEECC
Confidence 3579999986
No 46
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=30.23 E-value=12 Score=26.84 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=22.0
Q ss_pred eeeecceecccCcccccccc-------cccccCCCCCCCccccce
Q psy17801 47 RWFHDGCCECIGDTCINYGI-------NQSRHGVNARPRAAVWAR 84 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG~-------nesrC~~Cpe~~~~v~~~ 84 (97)
+|||- +|+|-+=-.|-. .+-.|..|.......|..
T Consensus 29 ~W~H~---~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~~~~ 70 (183)
T 3lqh_A 29 RWVHS---KCENLSDEMYEILSNLPESVAYTCVNCTERHPAEWRL 70 (183)
T ss_dssp CEEEG---GGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCHHHH
T ss_pred cccch---hccccCHHHHHHhhcCCCCCeeECcCCCCCCCHHHHH
Confidence 79998 556654322221 256999999877665543
No 47
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=30.22 E-value=9.8 Score=23.25 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=17.6
Q ss_pred eeeecceecccCccccccc-ccccccCCCCCCC
Q psy17801 47 RWFHDGCCECIGDTCINYG-INQSRHGVNARPR 78 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG-~nesrC~~Cpe~~ 78 (97)
+|||.. |||-+=...- +.+-.|..|....
T Consensus 35 ~WfH~~---Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 35 DWFHGS---CVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CEEEHH---HHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CcEEee---ecCcccccccCCCeEECCCccccc
Confidence 799985 5654332221 2466788887553
No 48
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=29.87 E-value=10 Score=23.30 Aligned_cols=6 Identities=50% Similarity=1.071 Sum_probs=4.8
Q ss_pred eeeecc
Q psy17801 47 RWFHDG 52 (97)
Q Consensus 47 RWFHdG 52 (97)
+|||-.
T Consensus 40 ~W~H~~ 45 (78)
T 1wew_A 40 VWQHVG 45 (78)
T ss_dssp CEEEHH
T ss_pred ccccCE
Confidence 499985
No 49
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=29.60 E-value=13 Score=20.51 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=16.1
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+.-. ..-...+.||+++
T Consensus 26 ~~v~L~C~~~~~--------------~~~~~~i~W~k~~ 50 (112)
T 3so5_A 26 SDVSFTCSAASS--------------SDSPMTFAWXXDN 50 (112)
T ss_dssp CCEEEEEEEEES--------------CCCCCEEEEEETT
T ss_pred CCEEEEEEEecC--------------CCCCEEEEEccCC
Confidence 467788877522 1112589999987
No 50
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=29.45 E-value=19 Score=21.37 Aligned_cols=9 Identities=56% Similarity=1.490 Sum_probs=7.6
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 35 ~~v~W~k~g 43 (91)
T 2lvc_A 35 APVRWYKDG 43 (91)
T ss_dssp SCCEEEETT
T ss_pred cEEEEEECC
Confidence 468999997
No 51
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=29.17 E-value=15 Score=24.04 Aligned_cols=8 Identities=38% Similarity=0.692 Sum_probs=7.4
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||+++
T Consensus 39 ~i~W~~~~ 46 (290)
T 2o26_X 39 FVRWTFKT 46 (290)
T ss_dssp EEEEEEEC
T ss_pred cEEEecCC
Confidence 89999987
No 52
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=29.16 E-value=13 Score=23.26 Aligned_cols=9 Identities=33% Similarity=0.722 Sum_probs=7.7
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 143 ~~v~W~k~g 151 (211)
T 3tv3_L 143 VTVAWKADS 151 (211)
T ss_dssp CEEEEEETT
T ss_pred eEEEEEECC
Confidence 579999996
No 53
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=29.00 E-value=24 Score=19.50 Aligned_cols=23 Identities=13% Similarity=0.492 Sum_probs=16.1
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+. +.-...++||+||
T Consensus 21 ~~v~l~C~~~----------------g~p~p~v~W~k~g 43 (99)
T 1g1c_A 21 SDAHFRVRVV----------------GKPDPECEWYKNG 43 (99)
T ss_dssp SCEEEEEEEE----------------EESCCEEEEEETT
T ss_pred CcEEEEEEEE----------------EeCCCEEEEEECC
Confidence 4677888874 1235679999986
No 54
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=28.83 E-value=11 Score=23.61 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=11.1
Q ss_pred HHhhhCC----Ceeeeeecc
Q psy17801 37 SCRSMGS----TSVRWFHDG 52 (97)
Q Consensus 37 sC~SmGA----ssYRWFHdG 52 (97)
.|...|. ..++||+||
T Consensus 134 ~C~~~g~~p~~~~v~W~k~g 153 (212)
T 1nfd_E 134 VCLVNDFYPGSATVTWKANG 153 (212)
T ss_dssp CEEEEEEBSSCCEEEEEETT
T ss_pred EEEEEeeECCccEEEEEECC
Confidence 3555553 489999986
No 55
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=28.71 E-value=17 Score=23.24 Aligned_cols=16 Identities=31% Similarity=0.623 Sum_probs=11.7
Q ss_pred HHhhhC---CCeeeeeecc
Q psy17801 37 SCRSMG---STSVRWFHDG 52 (97)
Q Consensus 37 sC~SmG---AssYRWFHdG 52 (97)
.|.+.| ...|+||.+|
T Consensus 130 ~C~~~g~~p~p~i~W~~~g 148 (193)
T 2if7_A 130 TCSVEDADDNVSFRWEALG 148 (193)
T ss_dssp EEEEESCCTTCEEEEEETT
T ss_pred EEEEecCCCceEEEEEeCC
Confidence 455566 3589999986
No 56
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=28.29 E-value=15 Score=22.07 Aligned_cols=8 Identities=25% Similarity=0.762 Sum_probs=7.1
Q ss_pred eeeeecce
Q psy17801 46 VRWFHDGC 53 (97)
Q Consensus 46 YRWFHdGC 53 (97)
|+||+||=
T Consensus 44 ~~w~k~g~ 51 (108)
T 4hwn_A 44 FSFYKDGR 51 (108)
T ss_dssp EEEEETTE
T ss_pred EEEEECCc
Confidence 99999984
No 57
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.13 E-value=14 Score=20.81 Aligned_cols=10 Identities=40% Similarity=1.129 Sum_probs=7.9
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...|.||+||
T Consensus 39 ~~~v~W~k~~ 48 (96)
T 2ens_A 39 SPQIHWMKDG 48 (96)
T ss_dssp SCCCCCEESS
T ss_pred CCEEEEEECC
Confidence 3579999985
No 58
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=28.04 E-value=22 Score=21.35 Aligned_cols=10 Identities=30% Similarity=0.617 Sum_probs=8.2
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+||
T Consensus 42 ~p~v~W~k~g 51 (107)
T 3knb_B 42 PPVVVWEKGG 51 (107)
T ss_dssp CCEEEEEETT
T ss_pred CCEEEEEECc
Confidence 4579999986
No 59
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=27.30 E-value=12 Score=22.73 Aligned_cols=8 Identities=50% Similarity=1.618 Sum_probs=6.1
Q ss_pred eeeeccee
Q psy17801 47 RWFHDGCC 54 (97)
Q Consensus 47 RWFHdGCC 54 (97)
+|||..|-
T Consensus 33 ~WfH~~Cv 40 (75)
T 3kqi_A 33 DWFHGSCV 40 (75)
T ss_dssp CEEEHHHH
T ss_pred CCEecccc
Confidence 79999543
No 60
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=27.21 E-value=19 Score=22.08 Aligned_cols=9 Identities=22% Similarity=0.707 Sum_probs=7.6
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..|+||+||
T Consensus 119 ~~~~W~k~g 127 (175)
T 1fnl_A 119 HKVTYLQNG 127 (175)
T ss_dssp EEEEEEETT
T ss_pred eEEEEEECC
Confidence 389999986
No 61
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=26.99 E-value=26 Score=19.81 Aligned_cols=22 Identities=23% Similarity=0.578 Sum_probs=15.3
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
...++.|.+. + -...++||+||
T Consensus 24 ~~v~l~C~~~--~---------------p~~~v~W~k~g 45 (100)
T 2yuv_A 24 GRVRFVVELA--D---------------PKLEVKWYKNG 45 (100)
T ss_dssp EEEEEEEEES--C---------------TTSCEEEEESS
T ss_pred CcEEEEEEec--C---------------CCceEEEEECC
Confidence 4677888763 1 23579999986
No 62
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=26.93 E-value=12 Score=25.12 Aligned_cols=28 Identities=18% Similarity=0.382 Sum_probs=14.4
Q ss_pred eeeecceecccCccccccc-ccccccCCCCCC
Q psy17801 47 RWFHDGCCECIGDTCINYG-INQSRHGVNARP 77 (97)
Q Consensus 47 RWFHdGCCECVG~~ClnYG-~nesrC~~Cpe~ 77 (97)
+|||-.| ||-.=.... ..+-.|..|...
T Consensus 31 ~WfH~~C---v~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 31 NWYHGRC---VGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CEEEHHH---HTCCHHHHTTCSSCCCHHHHHH
T ss_pred chhChhh---cCCchhhccCccCeecCCCcch
Confidence 8999865 553211110 234466666543
No 63
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=26.89 E-value=21 Score=22.17 Aligned_cols=10 Identities=30% Similarity=0.740 Sum_probs=8.6
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
.++++||+|+
T Consensus 17 ~~~i~W~k~~ 26 (79)
T 1xiw_B 17 NTSITWVEGT 26 (79)
T ss_dssp SSCEEEEEEC
T ss_pred CCCEEEEECC
Confidence 6789999986
No 64
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=26.62 E-value=62 Score=19.28 Aligned_cols=24 Identities=21% Similarity=0.657 Sum_probs=16.5
Q ss_pred CcceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 13 LTAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 13 ~~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
-..+++.|.+. ..-...++||++|
T Consensus 19 G~~v~l~C~~~----------------~~p~~~v~W~~~~ 42 (192)
T 2va4_A 19 GEEMTFSCRAS----------------GSPEPAISWFRNG 42 (192)
T ss_dssp CCCEEEECEEE----------------CSSCCEEEEEETT
T ss_pred CCCEEEEEeec----------------cCCCCeEEEEECC
Confidence 34678889864 1234579999975
No 65
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=26.55 E-value=18 Score=22.00 Aligned_cols=7 Identities=43% Similarity=1.374 Sum_probs=5.8
Q ss_pred eeeecce
Q psy17801 47 RWFHDGC 53 (97)
Q Consensus 47 RWFHdGC 53 (97)
+|||-.|
T Consensus 41 ~WfH~~C 47 (68)
T 3o70_A 41 TWIHLSC 47 (68)
T ss_dssp CEEETTT
T ss_pred ccccccc
Confidence 8999954
No 66
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=26.52 E-value=21 Score=22.61 Aligned_cols=17 Identities=6% Similarity=0.448 Sum_probs=12.7
Q ss_pred HHHhhhCC--Ceeeeeecc
Q psy17801 36 TSCRSMGS--TSVRWFHDG 52 (97)
Q Consensus 36 ~sC~SmGA--ssYRWFHdG 52 (97)
-.|...|. ..|.||+||
T Consensus 115 L~C~~~g~p~p~i~W~~~g 133 (176)
T 1hng_A 115 LTCEVLEGTDVELKLYQGK 133 (176)
T ss_dssp EEEECSSCSSCEEEEEETT
T ss_pred EEEEecCCCCcEEEEEECC
Confidence 45766665 589999986
No 67
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=26.48 E-value=20 Score=21.57 Aligned_cols=8 Identities=13% Similarity=0.833 Sum_probs=7.3
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.|+|++++
T Consensus 130 ~v~W~~~~ 137 (182)
T 1rhf_A 130 TIVWWRGT 137 (182)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 89999986
No 68
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=26.37 E-value=28 Score=20.32 Aligned_cols=15 Identities=27% Similarity=0.809 Sum_probs=10.3
Q ss_pred HhhhCC--Ceeeeeecc
Q psy17801 38 CRSMGS--TSVRWFHDG 52 (97)
Q Consensus 38 C~SmGA--ssYRWFHdG 52 (97)
|+..|. ..+.|||||
T Consensus 23 c~v~G~P~P~i~W~k~g 39 (103)
T 1wwb_X 23 FTVKGNPKPALQWFYNG 39 (103)
T ss_dssp EEEECSSCCEEEEEETT
T ss_pred EEEEEeCCCEEEEEECC
Confidence 334453 479999997
No 69
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=26.36 E-value=16 Score=22.80 Aligned_cols=8 Identities=50% Similarity=1.124 Sum_probs=7.0
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||+||
T Consensus 145 ~v~W~k~g 152 (213)
T 3d9a_L 145 NVKWKIDG 152 (213)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 79999986
No 70
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.33 E-value=24 Score=20.78 Aligned_cols=9 Identities=22% Similarity=0.763 Sum_probs=7.7
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 35 p~v~W~k~g 43 (100)
T 2yuz_A 35 IPGKWTKNG 43 (100)
T ss_dssp CCEEEEETT
T ss_pred CeEEEEECC
Confidence 579999997
No 71
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=26.07 E-value=16 Score=23.00 Aligned_cols=15 Identities=27% Similarity=0.561 Sum_probs=10.8
Q ss_pred HhhhC----CCeeeeeecc
Q psy17801 38 CRSMG----STSVRWFHDG 52 (97)
Q Consensus 38 C~SmG----AssYRWFHdG 52 (97)
|.+.| ...++||+||
T Consensus 157 C~~~~~~p~~~~v~W~k~g 175 (237)
T 3sob_L 157 CLLNNFYPREAKVQWKVDN 175 (237)
T ss_dssp EEEEEEBSSCCEEEEEETT
T ss_pred EEEcccCCCceEEEEEECC
Confidence 55555 3589999986
No 72
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=26.01 E-value=13 Score=23.33 Aligned_cols=8 Identities=63% Similarity=1.178 Sum_probs=7.0
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||+||
T Consensus 144 ~v~W~k~g 151 (210)
T 1lk3_L 144 SVKWKIDG 151 (210)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 79999986
No 73
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=25.72 E-value=16 Score=24.56 Aligned_cols=16 Identities=19% Similarity=0.789 Sum_probs=11.0
Q ss_pred HHhhhC---CC-eeeeeecc
Q psy17801 37 SCRSMG---ST-SVRWFHDG 52 (97)
Q Consensus 37 sC~SmG---As-sYRWFHdG 52 (97)
.|+..| .. .++||+||
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g 260 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENG 260 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETT
T ss_pred EEEEccccCCCcEEEEEECC
Confidence 455556 22 79999987
No 74
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=25.49 E-value=22 Score=22.59 Aligned_cols=18 Identities=6% Similarity=0.427 Sum_probs=13.9
Q ss_pred HHHHhhhC--CCeeeeeecc
Q psy17801 35 KTSCRSMG--STSVRWFHDG 52 (97)
Q Consensus 35 r~sC~SmG--AssYRWFHdG 52 (97)
.-.|++.| ..+|+||.||
T Consensus 109 ~L~C~~~~~p~p~i~W~~~~ 128 (171)
T 1ccz_A 109 TLTCEVLEGTDVELKLYQGK 128 (171)
T ss_dssp EEEEECSSCSSCEEEEEETT
T ss_pred EEEEEeCCCCCcEEEEEECC
Confidence 45788777 4589999987
No 75
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=25.48 E-value=25 Score=19.82 Aligned_cols=10 Identities=40% Similarity=0.916 Sum_probs=8.0
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+||
T Consensus 36 ~~~v~W~k~~ 45 (95)
T 2k1m_A 36 GVKVRWQRGG 45 (95)
T ss_dssp SCCCEEECSS
T ss_pred CCeEEEEECC
Confidence 4579999987
No 76
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=25.38 E-value=30 Score=20.33 Aligned_cols=10 Identities=30% Similarity=0.727 Sum_probs=8.2
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+||
T Consensus 34 ~p~v~W~k~g 43 (100)
T 3knb_A 34 TPEVTWSCGG 43 (100)
T ss_dssp CCEEEEEETT
T ss_pred CCEEEEEECc
Confidence 4579999987
No 77
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=24.87 E-value=21 Score=22.53 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=11.7
Q ss_pred HHhhhCC----Ceeeeeecc
Q psy17801 37 SCRSMGS----TSVRWFHDG 52 (97)
Q Consensus 37 sC~SmGA----ssYRWFHdG 52 (97)
.|.+.|. ..++||+||
T Consensus 156 ~C~~~g~~p~~~~v~W~k~g 175 (234)
T 2j6e_L 156 VCLISDFFPGAVTVAWKADG 175 (234)
T ss_dssp EECCCBCSSCCCEEEEEETT
T ss_pred EEEEEEEcCCceEEEEEECC
Confidence 4677764 279999985
No 78
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=24.72 E-value=24 Score=20.08 Aligned_cols=9 Identities=44% Similarity=1.413 Sum_probs=7.7
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 36 ~~v~W~k~g 44 (103)
T 1x44_A 36 ANVKWFKNG 44 (103)
T ss_dssp CCCEEEETT
T ss_pred CeEEEEECC
Confidence 579999987
No 79
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=24.50 E-value=18 Score=23.87 Aligned_cols=10 Identities=20% Similarity=0.936 Sum_probs=8.1
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||++|
T Consensus 35 ~~~v~W~k~~ 44 (315)
T 1itb_B 35 KGTITWYKDD 44 (315)
T ss_dssp SSCCCEECTT
T ss_pred CceEEEEeCC
Confidence 3489999996
No 80
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=24.13 E-value=24 Score=20.43 Aligned_cols=23 Identities=17% Similarity=0.201 Sum_probs=15.8
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+.- --...+.||+||
T Consensus 23 ~~v~l~C~~~g----------------~p~p~i~W~k~~ 45 (114)
T 2cqv_A 23 ESVELFGKVTG----------------TQPITCTWMKFR 45 (114)
T ss_dssp CCEEEEEEEES----------------SSSCEEEEEESS
T ss_pred CeEEEEEEEEc----------------CCCCEEEEEECC
Confidence 46778887741 124689999986
No 81
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=24.09 E-value=20 Score=22.66 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=14.8
Q ss_pred eeeeecceecccCcccccc-cccccccCCCCC
Q psy17801 46 VRWFHDGCCECIGDTCINY-GINQSRHGVNAR 76 (97)
Q Consensus 46 YRWFHdGCCECVG~~ClnY-G~nesrC~~Cpe 76 (97)
.+|||.+|-.=-...-++- -++.-.|..|-.
T Consensus 82 ~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 82 NEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp CCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred CCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 4899998754222222221 122245766653
No 82
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=23.83 E-value=24 Score=20.44 Aligned_cols=9 Identities=33% Similarity=0.962 Sum_probs=7.6
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+++
T Consensus 37 p~v~W~k~~ 45 (108)
T 3cx2_A 37 PVVKWFKGK 45 (108)
T ss_dssp CEEEEEETT
T ss_pred cEEEEccCC
Confidence 578999986
No 83
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=23.71 E-value=25 Score=20.46 Aligned_cols=9 Identities=56% Similarity=1.427 Sum_probs=7.5
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+||
T Consensus 25 p~v~W~k~g 33 (84)
T 2lu7_A 25 GPVRWYKDG 33 (84)
T ss_dssp TTCEEEETT
T ss_pred cEEEEEECC
Confidence 468999997
No 84
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=23.61 E-value=23 Score=20.84 Aligned_cols=7 Identities=14% Similarity=0.610 Sum_probs=6.2
Q ss_pred eeeeecc
Q psy17801 46 VRWFHDG 52 (97)
Q Consensus 46 YRWFHdG 52 (97)
++||+++
T Consensus 46 i~W~~~~ 52 (122)
T 2cry_A 46 IAWSWKE 52 (122)
T ss_dssp EEEESSS
T ss_pred eEEEECC
Confidence 8999995
No 85
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=23.49 E-value=19 Score=22.47 Aligned_cols=8 Identities=50% Similarity=1.032 Sum_probs=7.1
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.+.||+||
T Consensus 148 ~v~W~k~g 155 (212)
T 1q0x_L 148 TVDWKVDG 155 (212)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 79999986
No 86
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=23.45 E-value=35 Score=18.84 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=8.1
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+||
T Consensus 34 ~p~v~W~~~g 43 (100)
T 2kdg_A 34 APDVSWYLNG 43 (100)
T ss_dssp CCEEEEEETT
T ss_pred CCEEEEEECC
Confidence 4579999986
No 87
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=23.32 E-value=34 Score=19.91 Aligned_cols=15 Identities=27% Similarity=0.811 Sum_probs=10.4
Q ss_pred HhhhC--CCeeeeeecc
Q psy17801 38 CRSMG--STSVRWFHDG 52 (97)
Q Consensus 38 C~SmG--AssYRWFHdG 52 (97)
|...| ...++||+||
T Consensus 27 C~~~g~P~p~i~W~k~g 43 (118)
T 1wwc_A 27 FVVRGNPPPTLHWLHNG 43 (118)
T ss_dssp EEEECSSCCEEEEEETT
T ss_pred EEeeeeCCCeEEEEECC
Confidence 44445 4579999985
No 88
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.29 E-value=30 Score=19.74 Aligned_cols=10 Identities=50% Similarity=0.982 Sum_probs=8.2
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...++||+||
T Consensus 41 ~~~v~W~k~g 50 (113)
T 2cpc_A 41 WAEVRWTKDG 50 (113)
T ss_dssp TCCCEEEETT
T ss_pred CCeEEEEECC
Confidence 3679999986
No 89
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.24 E-value=27 Score=19.96 Aligned_cols=10 Identities=40% Similarity=1.155 Sum_probs=7.9
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+||
T Consensus 37 ~p~v~W~k~g 46 (110)
T 2dm2_A 37 KPKIYWFKDG 46 (110)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEEECC
Confidence 4579999976
No 90
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=23.07 E-value=36 Score=18.88 Aligned_cols=10 Identities=30% Similarity=1.069 Sum_probs=8.0
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...+.||+||
T Consensus 37 ~p~v~W~~~~ 46 (100)
T 3caf_A 37 MPTMRWLKNG 46 (100)
T ss_dssp CCEEEEEETT
T ss_pred CCEEEEEECC
Confidence 4569999986
No 91
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=22.95 E-value=25 Score=22.90 Aligned_cols=15 Identities=20% Similarity=0.835 Sum_probs=10.1
Q ss_pred HhhhC--CC-eeeeeecc
Q psy17801 38 CRSMG--ST-SVRWFHDG 52 (97)
Q Consensus 38 C~SmG--As-sYRWFHdG 52 (97)
|...| .. .++||+||
T Consensus 243 C~~~~~p~~~~v~W~~~g 260 (312)
T 2y23_A 243 CKVANIKKETHIVWYKDE 260 (312)
T ss_dssp EEEESCCSSCEEEEEETT
T ss_pred EEEcCCCCCCEEEEeeCC
Confidence 44455 33 89999986
No 92
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=22.17 E-value=17 Score=22.95 Aligned_cols=8 Identities=25% Similarity=0.671 Sum_probs=7.2
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.+.||+||
T Consensus 157 ~v~W~~~g 164 (219)
T 1c1e_H 157 TVTWNSGS 164 (219)
T ss_dssp EEEEGGGT
T ss_pred EEEEEeCC
Confidence 89999986
No 93
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=21.89 E-value=22 Score=22.87 Aligned_cols=15 Identities=27% Similarity=0.955 Sum_probs=10.7
Q ss_pred HhhhC---CC-eeeeeecc
Q psy17801 38 CRSMG---ST-SVRWFHDG 52 (97)
Q Consensus 38 C~SmG---As-sYRWFHdG 52 (97)
|.+.| .. .++||+||
T Consensus 146 C~~~g~~p~~~~v~W~~~g 164 (245)
T 4ei6_B 146 CLATGFYPDHVELSWWVNG 164 (245)
T ss_dssp EEEEEEBSSCEEEEEEETT
T ss_pred EEEeeEeCCCeEEEEEECC
Confidence 55556 33 79999996
No 94
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=21.74 E-value=19 Score=22.44 Aligned_cols=8 Identities=50% Similarity=1.132 Sum_probs=7.1
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||+||
T Consensus 145 ~v~W~k~g 152 (213)
T 3r06_A 145 NVKWKVDG 152 (213)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 79999986
No 95
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=21.66 E-value=29 Score=21.23 Aligned_cols=8 Identities=25% Similarity=0.945 Sum_probs=7.1
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.+.||++|
T Consensus 138 ~v~W~~~~ 145 (195)
T 2c5d_C 138 DLLWLQDA 145 (195)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 89999985
No 96
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=21.58 E-value=34 Score=19.20 Aligned_cols=9 Identities=44% Similarity=1.247 Sum_probs=7.5
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..+.||+||
T Consensus 38 p~i~W~k~g 46 (95)
T 2ckn_A 38 QSINWLRDG 46 (95)
T ss_dssp CEEEEEBTT
T ss_pred CceEEEECC
Confidence 489999986
No 97
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=21.55 E-value=22 Score=22.34 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=10.6
Q ss_pred HHhhhCC---C-eeeeeecc
Q psy17801 37 SCRSMGS---T-SVRWFHDG 52 (97)
Q Consensus 37 sC~SmGA---s-sYRWFHdG 52 (97)
.|.+.|. . .++||+||
T Consensus 135 ~C~~~g~~P~~~~v~W~k~g 154 (216)
T 2xzc_L 135 VCLLNNFYPREAKVQWKVDN 154 (216)
T ss_dssp EEEEEEEBSSCCEEEEEETT
T ss_pred EEEEEeEcCCceEEEEEECC
Confidence 3555552 2 79999985
No 98
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=21.46 E-value=27 Score=22.31 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=15.1
Q ss_pred eeeeecceecccCcccccccccccccCCCCC
Q psy17801 46 VRWFHDGCCECIGDTCINYGINQSRHGVNAR 76 (97)
Q Consensus 46 YRWFHdGCCECVG~~ClnYG~nesrC~~Cpe 76 (97)
-+|||-.| +|+.=..- ..+-.|..|..
T Consensus 49 ~~w~H~~C---~~~~~~~~-p~~w~C~~C~~ 75 (98)
T 2lv9_A 49 SVWQHIDC---MGIDRQHI-PDTYLCERCQP 75 (98)
T ss_dssp CBEEETTT---TTCCTTSC-CSSBCCTTTSS
T ss_pred CCcCcCcC---CCCCccCC-CCCEECCCCcC
Confidence 47999875 55531111 12357777753
No 99
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=21.20 E-value=42 Score=18.40 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=16.1
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+.- --...+.||+||
T Consensus 22 ~~~~l~C~~~g----------------~p~p~v~W~~~g 44 (99)
T 3puc_A 22 SVAKFAVKATG----------------EPRPTAIWTKDG 44 (99)
T ss_dssp SCEEEEEEEEE----------------ESCCEEEEEETT
T ss_pred CcEEEEEEEEe----------------cCCCEEEEEECC
Confidence 46778887742 234689999986
No 100
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=21.11 E-value=23 Score=21.17 Aligned_cols=31 Identities=32% Similarity=0.576 Sum_probs=15.0
Q ss_pred CcccccccccccccCCCCCCCccc-cceeccCc
Q psy17801 58 GDTCINYGINQSRHGVNARPRAAV-WARPVCGG 89 (97)
Q Consensus 58 G~~ClnYG~nesrC~~Cpe~~~~v-~~~p~~~~ 89 (97)
|..|+--...+++|. |+..=..+ ...||||-
T Consensus 12 g~~C~~~~~~~~~C~-C~~~C~~~~~~~pVCGs 43 (74)
T 1lr7_A 12 GKKCRMNKKNKPRCV-CAPDCSNITWKGPVCGL 43 (74)
T ss_dssp TEEEEECTTSCEEEE-ECCCGGGCCCCSCEEET
T ss_pred CCEEeECCCCCeeec-CCCCCCCCcCCCceeCC
Confidence 334443333455664 44321223 36799984
No 101
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=21.02 E-value=42 Score=18.70 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=16.0
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+. +--...+.||+||
T Consensus 24 ~~v~l~C~~~----------------g~p~p~i~W~k~~ 46 (103)
T 3qp3_A 24 QNTRFILNVQ----------------SKPTAEVKWYHNG 46 (103)
T ss_dssp CCEEEEEEEE----------------EESCCEEEEEETT
T ss_pred CeEEEEEEEE----------------ecCCCEEEEEECC
Confidence 4677888773 1224689999987
No 102
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=20.91 E-value=42 Score=18.44 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=15.8
Q ss_pred cceeeeeEEEEcccccChHHHHHHHhhhCCCeeeeeecc
Q psy17801 14 TAVTLNCTVAYMSTCMSWSKCKTSCRSMGSTSVRWFHDG 52 (97)
Q Consensus 14 ~~~t~nCTV~Y~~qC~S~nkCr~sC~SmGAssYRWFHdG 52 (97)
..+++.|.+.= --...+.||+++
T Consensus 21 ~~v~l~C~~~g----------------~p~p~v~W~k~~ 43 (99)
T 1u2h_A 21 QDVIMSIRVQG----------------EPKPVVSWLRNR 43 (99)
T ss_dssp CCEEEEEEEEE----------------ESCCEEEEEETT
T ss_pred CEEEEEEEEEE----------------cCCCEEEEEECC
Confidence 46788887731 134589999986
No 103
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=20.90 E-value=30 Score=23.44 Aligned_cols=10 Identities=30% Similarity=0.734 Sum_probs=8.6
Q ss_pred CCeeeeeecc
Q psy17801 43 STSVRWFHDG 52 (97)
Q Consensus 43 AssYRWFHdG 52 (97)
...|+||+||
T Consensus 36 ~~~v~W~k~g 45 (395)
T 1bih_A 36 GVKYSWKKDG 45 (395)
T ss_dssp SCEEEEEESS
T ss_pred CceEEEEECC
Confidence 6789999986
No 104
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=20.85 E-value=31 Score=22.61 Aligned_cols=19 Identities=21% Similarity=0.616 Sum_probs=14.1
Q ss_pred HHHHHhhhCC--Ceeeeeecc
Q psy17801 34 CKTSCRSMGS--TSVRWFHDG 52 (97)
Q Consensus 34 Cr~sC~SmGA--ssYRWFHdG 52 (97)
..-.|+..|. .+|+|++||
T Consensus 118 v~L~C~~~~~p~~~~~W~~~g 138 (182)
T 1hnf_A 118 TTLTCEVMNGTDPELNLYQDG 138 (182)
T ss_dssp TEEEEECSSCSSCEEEEEESS
T ss_pred EEEEeEccCCCCCEEEEEECC
Confidence 3456777764 589999997
No 105
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}
Probab=20.84 E-value=90 Score=18.53 Aligned_cols=26 Identities=23% Similarity=0.590 Sum_probs=20.2
Q ss_pred eeeEEEEcccccChHHHHHHHhhhCCC
Q psy17801 18 LNCTVAYMSTCMSWSKCKTSCRSMGST 44 (97)
Q Consensus 18 ~nCTV~Y~~qC~S~nkCr~sC~SmGAs 44 (97)
-.|-.++-.. ++|..=++.|+++||.
T Consensus 12 ~~CY~~~~~~-~~w~~A~~~C~~~g~~ 37 (122)
T 2c6u_A 12 DSCYGFFRHN-LTWEESKQYCTDMNAT 37 (122)
T ss_dssp TEEEEEEEEE-ECHHHHHHHHHHTTCE
T ss_pred CEEEEEECCc-CCHHHHHHHHHhCCCe
Confidence 4576555555 9999999999999863
No 106
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=20.36 E-value=20 Score=22.84 Aligned_cols=8 Identities=38% Similarity=1.211 Sum_probs=7.0
Q ss_pred eeeeeecc
Q psy17801 45 SVRWFHDG 52 (97)
Q Consensus 45 sYRWFHdG 52 (97)
.++||.|+
T Consensus 38 ~v~W~k~~ 45 (207)
T 1l6x_A 38 KFNWYVDG 45 (207)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 79999987
No 107
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=20.32 E-value=31 Score=20.88 Aligned_cols=9 Identities=22% Similarity=0.711 Sum_probs=7.5
Q ss_pred Ceeeeeecc
Q psy17801 44 TSVRWFHDG 52 (97)
Q Consensus 44 ssYRWFHdG 52 (97)
..++||+++
T Consensus 126 p~v~W~~~~ 134 (189)
T 2v44_A 126 PAVSWLYHN 134 (189)
T ss_dssp CEEEEEEEC
T ss_pred CcEEEEECC
Confidence 479999986
No 108
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=20.30 E-value=27 Score=25.30 Aligned_cols=16 Identities=25% Similarity=0.829 Sum_probs=11.6
Q ss_pred HHhhhCC------Ceeeeeecc
Q psy17801 37 SCRSMGS------TSVRWFHDG 52 (97)
Q Consensus 37 sC~SmGA------ssYRWFHdG 52 (97)
.|+..|. ..++||+||
T Consensus 340 ~C~~~g~~p~~~~~~v~W~k~g 361 (523)
T 2rcj_C 340 TCVVVDVSHEDPQVKFNWYVDG 361 (523)
T ss_pred EEEEecccCCCCceEEEEEECC
Confidence 4666664 289999996
No 109
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=20.28 E-value=28 Score=25.31 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=16.3
Q ss_pred CcccccccccccccC-----CCCCCCccccceeccCc
Q psy17801 58 GDTCINYGINQSRHG-----VNARPRAAVWARPVCGG 89 (97)
Q Consensus 58 G~~ClnYG~nesrC~-----~Cpe~~~~v~~~p~~~~ 89 (97)
|..|+--..+++.|. .||. +.....||||-
T Consensus 14 g~~C~~~~~~~~~CvC~~~~~C~~--~~~~~~pVCGs 48 (229)
T 1nub_A 14 GKVCELDENNTPMCVCQDPTSCPA--PIGEFEKVCSN 48 (229)
T ss_dssp TEEEEECTTCCEEEEECCGGGSCC--CSSGGGCEEET
T ss_pred CCEeeeCCCCCeeeecCCCCCCCC--cccCCCCccCC
Confidence 444554333455555 2554 22457899984
No 110
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=20.26 E-value=24 Score=22.62 Aligned_cols=15 Identities=27% Similarity=0.931 Sum_probs=10.4
Q ss_pred HhhhC---CC-eeeeeecc
Q psy17801 38 CRSMG---ST-SVRWFHDG 52 (97)
Q Consensus 38 C~SmG---As-sYRWFHdG 52 (97)
|.+.| .. .++||+||
T Consensus 144 C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 144 CLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp EEEEEEBSSCEEEEEEETT
T ss_pred EEEeeEECCCeEEEEEECC
Confidence 55555 33 78999997
No 111
>1gps_A Gamma-1-P thionin; plant toxin; NMR {Triticum turgidum} SCOP: g.3.7.5 PDB: 1gpt_A
Probab=20.17 E-value=66 Score=18.72 Aligned_cols=22 Identities=27% Similarity=0.658 Sum_probs=17.8
Q ss_pred EcccccChHHHHHHHhhhCCCe
Q psy17801 24 YMSTCMSWSKCKTSCRSMGSTS 45 (97)
Q Consensus 24 Y~~qC~S~nkCr~sC~SmGAss 45 (97)
|--.|++.+.|...|..=|+++
T Consensus 10 fkG~C~~~~nC~~vC~~Egf~~ 31 (47)
T 1gps_A 10 FKGPCMSNKNCAQVCQQEGWGG 31 (47)
T ss_dssp CCSCCCSHHHHHHHHHHTTCSE
T ss_pred ceEEcCCCcCHHHHhhhCCCCC
Confidence 3456999999999999877753
Done!