BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17806
(130 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 120/129 (93%), Positives = 124/129 (96%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR+LRRYLYSR+K
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLYSRKKGGG 195
Query: 121 RRSSRSRSR 129
+ SRSRS+
Sbjct: 196 KGRSRSRSK 204
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/114 (99%), Positives = 114/114 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 77 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 136
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY+
Sbjct: 137 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYA 190
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/113 (98%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/113 (97%), Positives = 113/113 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR+LRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLY 188
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/113 (97%), Positives = 111/113 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE AE AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR+YLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRKYLY 188
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/113 (96%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/113 (96%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/113 (96%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/113 (96%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/113 (96%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/115 (93%), Positives = 111/115 (96%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH+DNFFEDVF ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW
Sbjct: 79 QEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 138
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 116
F GRPVYAELSPVTDFREACCRQYE+GECTRSGFCNFMHLKPISRELRR LY R+
Sbjct: 139 FAGRPVYAELSPVTDFREACCRQYELGECTRSGFCNFMHLKPISRELRRELYGRK 193
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/109 (98%), Positives = 107/109 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE AE AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 184
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/128 (82%), Positives = 116/128 (90%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAVNDLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++S
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKSQ 193
Query: 121 RRSSRSRS 128
++ SR S
Sbjct: 194 QQGSRVTS 201
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/113 (93%), Positives = 110/113 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFED FVE EDKYGE+EEMNVCDNLGDHLVGNVYIKFRREEDAE+AV+DLNNR
Sbjct: 75 MQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRREEDAERAVSDLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WFGGRP+YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR LY
Sbjct: 135 WFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRDLY 187
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 193 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 252
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 253 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 299
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 110/118 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 156 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 215
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++
Sbjct: 216 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRK 273
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/133 (80%), Positives = 113/133 (84%), Gaps = 13/133 (9%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 107
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRGKTASEECTRSGFCNFMHLKPISRE 194
Query: 108 LRRYLYSRRKRSS 120
LRR LY R++R S
Sbjct: 195 LRRELYGRKRRKS 207
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 104/107 (97%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 767 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 826
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 827 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 879
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/117 (87%), Positives = 109/117 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E EDKYG+IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNNR
Sbjct: 66 MQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNR 125
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISR+LRR LY RRK
Sbjct: 126 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRDLRRKLYGRRK 182
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/113 (89%), Positives = 108/113 (95%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFR+E+DAEKAV +LNNR
Sbjct: 74 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKEDDAEKAVKELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF GRPV AELSPVTDFREACCRQYEMGECTRSGFCNFMHL+PISRELR+ LY
Sbjct: 134 WFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFCNFMHLRPISRELRKELY 186
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 110/118 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRK 177
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 234 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 293
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 294 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 346
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/119 (84%), Positives = 110/119 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQ+H+D+FFE+VF E +DKYGEIEEMNVCDN+GDHLVGNVY+KFR EEDAEKAVNDLNNR
Sbjct: 74 MQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNEEDAEKAVNDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WF G+P+ AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR R+
Sbjct: 134 WFNGQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRVRT 192
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 110/122 (90%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+HYD+FFE+VFVE EDKYGEIEEMNVCDNLGDHLVGNVYIKFR EE AEK V +LNNR
Sbjct: 74 VQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSEESAEKGVEELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF GRP+++ELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R + S
Sbjct: 134 WFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRSRHSK 193
Query: 121 RR 122
R+
Sbjct: 194 RK 195
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 157 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 216
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 217 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 269
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 109/118 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 109/118 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 109/118 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 109/118 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 108/126 (85%), Gaps = 13/126 (10%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 107
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTAATEECTRSGFCNFMHLKPISRE 194
Query: 108 LRRYLY 113
LRR LY
Sbjct: 195 LRRELY 200
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/118 (84%), Positives = 109/118 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R ++
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRLRK 191
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 109/119 (91%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKKG 192
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 124 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 183
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 184 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 236
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 108/126 (85%), Gaps = 13/126 (10%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 107
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRTTEASEECTRSGFCNFMHLKPISRE 194
Query: 108 LRRYLY 113
LRR LY
Sbjct: 195 LRRELY 200
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/113 (88%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/114 (87%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 75 MQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVKDLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 135 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 188
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 176 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 235
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 236 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 288
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 156 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 215
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 216 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 268
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 36 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 95
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 96 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 148
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 38 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 97
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 98 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 150
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 108 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 167
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY R R R
Sbjct: 168 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHR 227
Query: 119 SSRRS 123
S RS
Sbjct: 228 SPPRS 232
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/114 (86%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 47 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 106
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 107 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 159
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 78 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 137
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 138 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 190
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR+EEDAEKA+ DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAMLDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF G+P++AELSPVTDFREACC QYE G CTR GFCNFMHLKPISR+LRR LY R R S
Sbjct: 134 WFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRDLRRQLYGHR-RKS 192
Query: 121 RRSSRSRSR 129
R+ RSR R
Sbjct: 193 RQRPRSRDR 201
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKA+ DLNNR
Sbjct: 45 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNNR 104
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 105 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 158
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+PV++ELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRDLY 186
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/114 (86%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 7 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 66
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 67 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 120
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 105/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 105/112 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR L
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRREL 185
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 80 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 139
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 140 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 192
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHL+PISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLEPISRELRRELY 186
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/113 (85%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR+EEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFCNFMHLKPISRELRRELY 186
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/112 (86%), Positives = 106/112 (94%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEHYD FFEDVF+E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAVNDLNNRW
Sbjct: 75 QEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNDLNNRW 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
+ G+P+YAELSPVTDFREACCRQYEMGECTR GFCNFMHL+PISR++RR LY
Sbjct: 135 YNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCNFMHLRPISRDVRRELY 186
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
M+EHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNR
Sbjct: 73 MREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 105/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREA CRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY R R R
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHR 193
Query: 119 SSRRS 123
S RS
Sbjct: 194 SPPRS 198
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/125 (79%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 39 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 98
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR L+R LY R R R
Sbjct: 99 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLQRQLYGRGPRHR 158
Query: 119 SSRRS 123
S RS
Sbjct: 159 SPPRS 163
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 104/113 (92%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q HY+ FFEDVF+ECE+KYG IE+MNVCDNLGDHLVGNVYIKFR EEDAEKAV LNNRW
Sbjct: 74 QAHYEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRFEEDAEKAVQSLNNRW 133
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
F G P++AELSPVTDF+EACCRQY+MGECTR GFCNFMHLKPISREL+R+LYS
Sbjct: 134 FNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFCNFMHLKPISRELKRFLYS 186
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 105/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KY E+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 107/119 (89%), Gaps = 4/119 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGN FRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKAVMDLNNR 129
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++S
Sbjct: 130 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKS 188
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/125 (78%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 77 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 136
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY + + R
Sbjct: 137 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGQGPKHR 196
Query: 119 SSRRS 123
S RS
Sbjct: 197 SPPRS 201
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/118 (80%), Positives = 107/118 (90%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYD+FFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF G+ V AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY R R
Sbjct: 134 WFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLYGRGPR 191
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 106/121 (87%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF+E +KYGE+EEMNVCDNLGDHLVGNVY K REEDAEKAV DLNNR
Sbjct: 72 MQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPREEDAEKAVIDLNNR 131
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF G+P++AELSPVTDFR ACCRQYEMGECTR GFCNFMHLKPISRELRR L +R++
Sbjct: 132 WFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRELRRELCGQRRKKH 191
Query: 121 R 121
R
Sbjct: 192 R 192
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 106/113 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 186
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 105/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 105/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 102/107 (95%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEHYDNFFEDVF+E E KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV+++NNRW
Sbjct: 29 QEHYDNFFEDVFLELEAKYGEIEEMNVCDNLGDHLVGNVYVKFRFEEDAEKAVDNVNNRW 88
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
+ G+P+YAELSPVTDFRE+CCRQYEMGECTR GFCNFMHLKPISREL
Sbjct: 89 YNGQPIYAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLKPISREL 135
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/112 (84%), Positives = 102/112 (91%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQ+HY FF++VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVVDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
WF GRP+YAELSPVTDFREACCRQYE GEC R GFCNFMHLKPISRELRR L
Sbjct: 134 WFHGRPIYAELSPVTDFREACCRQYETGECARGGFCNFMHLKPISRELRREL 185
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ YD FFE+V+VE E KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAVN+LNNR
Sbjct: 98 LQQFYDEFFEEVYVELE-KYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNELNNR 156
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF GRPV+AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 157 WFNGRPVHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 210
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 103/114 (90%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D+FFE+VF E E KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 81 VQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVEDLNNR 140
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF +P+ AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 141 WFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 194
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/113 (81%), Positives = 104/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGE EEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 33 VQEHYDNFFEEVFTELQEKYGEXEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 92
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR LY
Sbjct: 93 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQLY 145
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 99/105 (94%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 105
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPIS
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/114 (84%), Positives = 102/114 (89%), Gaps = 4/114 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGN FRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKAVMDLNNR 129
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 130 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 183
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/118 (80%), Positives = 100/118 (84%), Gaps = 13/118 (11%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPIS 105
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMH +PIS
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTTATEECTRSGFCNFMHPQPIS 192
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 116/130 (89%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYDNFFE+VFVE E+KYG IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNNR
Sbjct: 75 MQEHYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF G+P+ +ELS VTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R+++
Sbjct: 135 WFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYGRKEKKK 194
Query: 121 R-RSSRSRSR 129
R RS +R+R
Sbjct: 195 RSRSPPTRNR 204
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 98/108 (90%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+H+D+++ED+FVE E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EE A AVN LNNRW
Sbjct: 76 QKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRSEEHASAAVNSLNNRW 135
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
F G P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISR LR
Sbjct: 136 FNGNPIFAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRSLR 183
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 110/124 (88%), Gaps = 2/124 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYD+FFE+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L R LY + R+R
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLWRQLYGQGPRRR 193
Query: 119 SSRR 122
S R
Sbjct: 194 SPPR 197
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/113 (78%), Positives = 105/113 (92%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYD+FFE+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 186
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 103/113 (91%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYD+FFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 134 WFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLY 186
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 97/108 (89%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQ+HYD FF++VF E E+KYGE+EEMNVCDN GDHL GNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLAGNVYVKFRREEDAEKAVMDLNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
WF +P+ AELSPVTDFREACCRQYEMGECT+ GFCN MHLKPISREL
Sbjct: 134 WFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFCNLMHLKPISREL 181
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 103/118 (87%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+HYD F+E+VF E EDKYGEIEEMNVC+NLGDHLVGNVYIKF REED EKA +N+R
Sbjct: 75 LQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYREEDCEKAAEGVNDR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WFG +P+ ELSPVT+FREACCR YEMGECTR GFCNFMHLKPIS++LR+ LY+++ +
Sbjct: 135 WFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFCNFMHLKPISKDLRKKLYAKKDK 192
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 113/127 (88%), Gaps = 1/127 (0%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
HYDNFFE+VFVE E+KYG IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNNRWF
Sbjct: 47 HYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNRWFN 106
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR-R 122
G+P+ +ELS VTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R+++ R R
Sbjct: 107 GQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYGRKEKKKRSR 166
Query: 123 SSRSRSR 129
S +R+R
Sbjct: 167 SPPTRNR 173
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/118 (72%), Positives = 101/118 (85%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE++DNFF D+F E E+KYG I +MNVCDNLGDHLVGNVYI F+ EEDAEKAV DLNNR
Sbjct: 75 LQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKNEEDAEKAVEDLNNR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
W+ G P+ AELSPVTDF+EACCRQYE+GECTR GFCNFMHLKP+S+ +R L+ R+R
Sbjct: 135 WYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSKSMRDVLFGDRRR 192
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 96/104 (92%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+H+D FFE++F E EDKYGEIEEMNVCDN+G+H++GNVYIKF+REEDAE+AV DLN RW
Sbjct: 100 QQHFDEFFEEIFDEVEDKYGEIEEMNVCDNIGEHMIGNVYIKFKREEDAERAVKDLNTRW 159
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 105
FGG P+YAELSPVTDFREACCRQYEMG+C + GFCNFMHLKPIS
Sbjct: 160 FGGMPIYAELSPVTDFREACCRQYEMGDCGKGGFCNFMHLKPIS 203
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 91/96 (94%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFR
Sbjct: 69 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 128
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
EACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 129 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 164
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 91/96 (94%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
EACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 152 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 187
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 91/96 (94%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
EACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 152 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 187
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 91/96 (94%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFR
Sbjct: 90 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 149
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
EACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 150 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 185
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 98/107 (91%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 147
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 91/96 (94%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFR
Sbjct: 88 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLRWFGGRPVHAELSPVTDFR 147
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
EACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 148 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 183
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 105/127 (82%), Gaps = 3/127 (2%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +L+NRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS---RRKRSSRRS 123
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR LY RR+ R
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQLYGWGPRRRSPPRFH 160
Query: 124 SRSRSRD 130
+ R R+
Sbjct: 161 TGHRPRE 167
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 107/125 (85%), Gaps = 2/125 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+HYD+FFE+VF E ++KYGEIEEMNV DNL +HLVGN+Y+KFRREEDAE+AV +L+NR
Sbjct: 122 LQQHYDSFFEEVFTELQEKYGEIEEMNVYDNLRNHLVGNIYVKFRREEDAERAVAELHNR 181
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 118
WF G+ V+A+LSPVTDF E+CC QYEMGECT+ GFCNFMHL+PISR LR+ LY R R R
Sbjct: 182 WFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFCNFMHLRPISRNLRQQLYGRGPRCR 241
Query: 119 SSRRS 123
S RS
Sbjct: 242 SPPRS 246
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/116 (69%), Positives = 99/116 (85%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q H++ FFEDVF+ECE+KYG IE+M+VCDNLGDHL+GNVYIKFR EEDAEKAV LNNRW
Sbjct: 68 QSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFEEDAEKAVQSLNNRW 127
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
F +PV AELSPVT+F+EACC Q+++G+C R GFCNF H+KPI +LRR+LY +K
Sbjct: 128 FNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFCNFWHIKPIPHKLRRFLYGGQK 183
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 100/118 (84%), Gaps = 2/118 (1%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKRSSRR 122
V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY R R RS R
Sbjct: 101 VHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPRHRSPPR 158
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 97/112 (86%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY R R
Sbjct: 101 VHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPR 152
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 98/109 (89%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 23 TFSQEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 82
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y R
Sbjct: 83 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVYGR 131
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 97/107 (90%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y
Sbjct: 101 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 147
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 95/113 (84%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+H+D F+EDVF E E+KYG +EEMNVCDNL +HLVGN Y+KFRREEDAE+A DLNNRW
Sbjct: 76 QDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKFRREEDAERAAEDLNNRW 135
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
F GR V AELS VTDF EACCRQY++G+C GFCNFMH+KPIS+ELRR +Y
Sbjct: 136 FDGRVVSAELSTVTDFNEACCRQYDIGQCKFGGFCNFMHIKPISKELRREIYG 188
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 94/107 (87%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED + AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 101 VHVELSPVTDFRESCCRQYEMGECTRGGFCNFMHLQPISQNLQRQLY 147
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 95/107 (88%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 101 VHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLY 147
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 91/113 (80%), Gaps = 16/113 (14%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY NNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY----------------NNR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 118 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 170
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 96/121 (79%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +D F+ +VFVE +D+YG IEEMNVCDN+G+H++GNVY+KFR E AE+AVN LN RW
Sbjct: 72 QREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAERAVNSLNERW 131
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F GRP++ ELSPV DFR+ACCRQYE+GEC R GFCNFMHLK +S L+R L R +R R
Sbjct: 132 FDGRPIHCELSPVVDFRDACCRQYEIGECNRGGFCNFMHLKKVSSGLKRKLLRRSERQKR 191
Query: 122 R 122
R
Sbjct: 192 R 192
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 98/117 (83%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 92 QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKDLQNRW 151
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
F G+P+YAELSPVTDFREA CRQ+E+ C++ GFCNFMHLK IS EL LY RR R
Sbjct: 152 FNGQPIYAELSPVTDFREARCRQHEVTTCSKGGFCNFMHLKAISPELGDRLYGRRGR 208
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNRW
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRAD 203
Query: 122 RSSRSRSR 129
+ S+
Sbjct: 204 AAGHYPSQ 211
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNRW
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRAD 203
Query: 122 RSSRSRSR 129
+ S+
Sbjct: 204 AAGHYPSQ 211
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNRW
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISSELGDRLYGRRGRRAD 203
Query: 122 RSSRSRSR 129
+ S+
Sbjct: 204 AAGHYPSQ 211
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNRW
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRAD 203
Query: 122 RSSRSRSR 129
+ S+
Sbjct: 204 AAGHYPSQ 211
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 96/117 (82%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 192 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 251
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
F G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 252 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGEKLFGRRGR 308
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 96/117 (82%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 94 QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENRW 153
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
F G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 154 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGRRGR 210
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 96/117 (82%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 94 QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENRW 153
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
F G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 154 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGRRGR 210
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/89 (91%), Positives = 84/89 (94%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
MNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFREACCRQY
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQY 60
Query: 86 EMGECTRSGFCNFMHLKPISRELRRYLYS 114
E+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 61 ELGECTRGGFCNFMHLKPISRELCRKLYN 89
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 94/117 (80%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 94 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 153
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
F G+P+Y ELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS L L+ RR R
Sbjct: 154 FNGQPIYVELSPVTDFRESRCRQHEITTCCKGGFCNFMHLKAISPALGEKLFGRRGR 210
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYD+F E+VF E ++KYGEIEEMNV DNLGDHLVGNVY+KFRREEDAE+AV +LNN
Sbjct: 134 VQEHYDSF-EEVFTELQEKYGEIEEMNVXDNLGDHLVGNVYVKFRREEDAERAVAELNN- 191
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
F G+ V+AELS VTDFRE+CC QYEMGECTR GFCNFMHL+PIS+ LR
Sbjct: 192 XFNGQAVHAELSHVTDFRESCCCQYEMGECTRGGFCNFMHLRPISQNLR 240
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 104/144 (72%), Gaps = 15/144 (10%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE++D FED+F+E KYGE+E+MN+CDN+GDHL+GNVY +F+ EEDA AV LNNR
Sbjct: 68 IQENFDLLFEDLFMELA-KYGELEDMNICDNVGDHLIGNVYARFKYEEDAGNAVESLNNR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS- 119
++ GRP+YAELSPVTDF EACCRQYE+GECTR GFCNFMH+K S+ + + +Y ++ S
Sbjct: 127 FYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFCNFMHIKKPSKAMIKDMYKAQRLSI 186
Query: 120 -------------SRRSSRSRSRD 130
SR SR R RD
Sbjct: 187 KILKPRGDEDDGRSRSHSRERYRD 210
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +D FF +V++E ++KYGEI+EMNVCDN G+H++GNVYIKF E +A A+ LNNRW
Sbjct: 75 QREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALNNRW 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-----YSRR 116
F G+P++ ELSPV+DFR+ACCRQYE GEC+R GFCNFMHLK +S L+R L +RR
Sbjct: 135 FDGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESGKARR 194
Query: 117 KRSSR 121
K+S++
Sbjct: 195 KKSAK 199
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +D FF +V++E +++YGEI+EMNVCDN G+H++GNVYIKF E +A AV LNNRW
Sbjct: 60 QREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALNNRW 119
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
F G+P++ ELSPV+DFR+ACCRQYE GEC+R GFCNFMHLK +S L+R L + R
Sbjct: 120 FNGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESEGRKR 179
Query: 122 RSSRSRSR 129
R ++ R
Sbjct: 180 RKKSAKLR 187
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 85/93 (91%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRS 93
WF G+ V+AELSPVTDFRE+CCRQYEMG RS
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGSPPRS 166
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE++D F+EDVF+E K+GE+E+M VCDN+GDHLVGNVY ++R EE A AV LNNR
Sbjct: 68 LQENFDLFYEDVFMELA-KFGEVEDMVVCDNVGDHLVGNVYCQYRLEESAGNAVESLNNR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+YAELSPVTDFREACCRQ+E+ EC R GFCNFMHLK +R +RR LY ++
Sbjct: 127 FYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRTMRRELYEGQRMDI 186
Query: 121 RRSSRSRSR 129
R + +R
Sbjct: 187 REKRKEETR 195
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 95/107 (88%), Gaps = 1/107 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+HY+ FF++VF E ++YGE+EEMNVCDNLGDHLVGNVY+KF REEDAEKA+ +N+RW
Sbjct: 75 QQHYEEFFQEVFTE-MEEYGEVEEMNVCDNLGDHLVGNVYVKFGREEDAEKALVAVNSRW 133
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
F G+P++AELSPVTDFREACCRQYE G C R GFCNFMHLKPISREL
Sbjct: 134 FHGQPIHAELSPVTDFREACCRQYETGACARGGFCNFMHLKPISREL 180
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D F+EDVF+E K+GE+EEM VCDN+GDHLVGNVY +FR EE A AV LNNR
Sbjct: 68 LQEDFDLFYEDVFMELA-KFGEVEEMVVCDNVGDHLVGNVYCQFRLEESAGNAVESLNNR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+YAELSPVTDFREACCRQ+E+ EC R GFCNFMHLK +R LR+ LY ++
Sbjct: 127 FYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRALRQELYEGQRMDI 186
Query: 121 RRSSRSRSR 129
R + R
Sbjct: 187 REKRKEEMR 195
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/117 (62%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E YGEIE +N+CDNL DHLVGNVY+K+R EE A A+N L+ R
Sbjct: 78 MQEHFEDFYEDIFEELA-TYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNALSGR 136
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
++ GRP+ E SPVTDFRE+ CRQYE CTR G+CNFMHLKPISR LR+ L+ R K
Sbjct: 137 FYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLKPISRNLRKILFGRYK 193
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 77
DK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NRWF G PVYAELSPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 78 REACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 116
REACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 77
DK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NRWF G PVYAELSPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 78 REACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 116
REACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 77
DK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NRWF G PVYAELSPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 78 REACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 116
REACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDN DHL+GNVY+KFR EE A A+N L+ R
Sbjct: 74 IQEHFEDFYEDIFEELA-KYGEIEGLNVCDNTSDHLIGNVYVKFREEESALAALNALSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
++ GRP+ E SPVTDFRE+ CRQYE C R G+CNFMHLKPISR+LR+ L+ R K
Sbjct: 133 FYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQLRKILFGRYK 189
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 83/99 (83%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 77
DK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L++RWF G P+YAELSPVTDF
Sbjct: 100 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLDDRWFNGCPIYAELSPVTDF 159
Query: 78 REACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 116
REACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 160 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 198
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 88/120 (73%), Gaps = 10/120 (8%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+D F+ D+F E E+KYG +E+MNVCDNLGDHLVGNVY+ F +ED EKAV DLNNR
Sbjct: 262 LQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVMFENDEDGEKAVLDLNNR 321
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+G VTDFREACCRQYE ECTR GFCNFMHL+ + +++ LY R R S
Sbjct: 322 WYG----------VTDFREACCRQYEKSECTRGGFCNFMHLRKLGDNMQKTLYGNRVRPS 371
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDNL DH++GNVY+KFR EE A A+N L+ R
Sbjct: 77 LQEHFEDFYEDIFEEL-SKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAALNALSGR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 136 FYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFG 189
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDNL DH++GNVY+KFR EE A A+N L+ R
Sbjct: 77 LQEHFEDFYEDIFEEL-SKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAALNALSGR 135
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 136 FYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFG 189
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +++F+ED+F+E K+GE+E +NVCDNL DH+VGNVY+KFR EE+A +A+ + R
Sbjct: 75 VQEFFEDFYEDIFLELA-KFGEVEYLNVCDNLADHMVGNVYVKFRDEEEAARALQGMQGR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ G+P+ E SPVTDFREA CRQYE C+R G+CNFMH++P+SRELR+ L+ R K +
Sbjct: 134 YYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCNFMHVRPVSRELRKQLFGRYKGGT 193
Query: 121 RRSSR 125
S++
Sbjct: 194 GGSTK 198
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH+++F+ED+F E DKYG+IE +NVCDNL DH+VGNVYIKF E+ A +A+ L R+
Sbjct: 76 QEHFEDFYEDIFEEM-DKYGQIEHLNVCDNLADHMVGNVYIKFVDEDAAARALQGLTGRF 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
+ GRP+ E SPVTDFREA CRQYE CTR G+CNFMHL+PIS+ LR+ L+ R K+
Sbjct: 135 YAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKGLRKDLFGRYKK 191
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 97/129 (75%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D+F+ED+F E KYG I+ +N+CDNL DH+VGNVY++FR E+ A A+ +L R
Sbjct: 78 VQDHFDDFYEDLFEELS-KYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGR 136
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR-S 119
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R +R +
Sbjct: 137 FYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWN 196
Query: 120 SRRSSRSRS 128
R SRSRS
Sbjct: 197 GRSGSRSRS 205
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H++ F+ED+F E KYGEI+ +NVCDNL DH+VGNVY++FR EEDAE A+ +L+ R
Sbjct: 74 IQQHFEEFYEDLFQELS-KYGEIDSLNVCDNLADHMVGNVYVQFREEEDAENALRNLSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMHLK I RELR L+ R
Sbjct: 133 FYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGRELRHQLFGR 187
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
R RSRSR
Sbjct: 192 RYHGRSRSR 200
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
R RSRSR
Sbjct: 192 RYHGRSRSR 200
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
R RSRSR
Sbjct: 192 RYHGRSRSR 200
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
R RSRSR
Sbjct: 192 RYHGRSRSR 200
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
R RSRSR
Sbjct: 192 RYHGRSRSR 200
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 97/129 (75%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D+F+ED+F E KYG I+ +N+CDNL DH+VGNVY++FR E+ A A+ +L R
Sbjct: 78 VQDHFDDFYEDLFEELS-KYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGR 136
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR-S 119
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R +R +
Sbjct: 137 FYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWN 196
Query: 120 SRRSSRSRS 128
R SRS+S
Sbjct: 197 GRSGSRSKS 205
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED+FVE +YG++ EM+VCDN+GDHL+GNVY ++R E DA++AV+ LN+R
Sbjct: 69 LQAQFDTFYEDMFVELA-QYGQLVEMHVCDNVGDHLIGNVYARYRYEADAQRAVDALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ G+P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ SR +R+ L
Sbjct: 128 WYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKQL 179
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E +D F+ED+F E KYGE+E++ VCDN+GDHLVGNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LAEQFDAFYEDMFCEF-SKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL-KPISRELRRYLYSRRK 117
W+ RPVYAELSPVTDFREACCRQ+E EC R G CNFMH KP + LR + ++RK
Sbjct: 128 WYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQLLRDLVLAQRK 185
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 74 IQEHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRELRRQLFG 186
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D+F+ED+F E KYG+I+ +N+CDNL DH+VGNVY++++ E+ A A+ +L R
Sbjct: 80 LQDHFDDFYEDLFQELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALTNLTGR 138
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R KR
Sbjct: 139 FYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRRLFGRNKR 196
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRS 128
R +RSRS
Sbjct: 192 RYHARSRS 199
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRS 128
R +RSRS
Sbjct: 192 RYHARSRS 199
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQ H+++F+ED+F E +KYGEIE +NVCDNL DH+VGNVY++FR EE A A+++L R
Sbjct: 74 MQAHFEDFYEDLFEEL-NKYGEIESLNVCDNLSDHMVGNVYVQFREEEQAGNALHNLQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS LRR LY R K +
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNFMHLKSISSGLRRQLYGRYK-NR 191
Query: 121 RRSSRSRS 128
SRSRS
Sbjct: 192 HIHSRSRS 199
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY+++R EE+A A +L+ R
Sbjct: 19 IQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQYREEEEAANAHRNLSGR 77
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R +R
Sbjct: 78 FYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQLFGRYRR 135
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I ++LRR LY R S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKDLRRKLYGRSA-SR 191
Query: 121 RRSSRSRSR 129
+ RSRSR
Sbjct: 192 KYHGRSRSR 200
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E +D F+ED+F E KYGE+E++ VCDN+GDHLVGNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LAEQFDAFYEDMFCEF-SKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL-KPISRELRRYLYSRRKRS 119
W+ RPVYAELSPVTDFREACCRQ+E EC R G CNFMH KP + R+ S +K
Sbjct: 128 WYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQSFTRFGTSTKKVF 187
Query: 120 SRRSSR 125
+ SR
Sbjct: 188 GLKCSR 193
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 77/82 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 29 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 88
Query: 61 WFGGRPVYAELSPVTDFREACC 82
WF G+P++AELSPVTDFREACC
Sbjct: 89 WFNGQPIHAELSPVTDFREACC 110
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGEIESLNVCDNLADHMVGNVYVQFREEEHAAAALQALTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
++ GR + + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R +R
Sbjct: 133 FYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+D+F+ED+F E KYG+I+ +N+CDNL DH+VGNVY++++ E+ A A+ +L R
Sbjct: 88 LQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGR 146
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR-- 118
++ GRP+ SPVTDFREA CRQYE C R G+CNFMHLK ISR+LR+ L+ R R
Sbjct: 147 FYSGRPIIVGFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSSRRW 206
Query: 119 SSRRSSRSRS 128
+ R SRSRS
Sbjct: 207 NDRSGSRSRS 216
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E +D F+ED+F E KYGE+E++ VCDN+GDHL+GNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LDEQFDAFYEDMFCEFA-KYGEVEQIVVCDNIGDHLIGNVYVRFKYEESAQNAIDDLNSR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
W+ +PVYAELSPVTDFREACCRQ+E EC R G CNFMH K S L R L + +++
Sbjct: 128 WYSQKPVYAELSPVTDFREACCRQHETSECGRGGLCNFMHAKKPSPHLIRELMAAQRK 185
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ +L+ R
Sbjct: 74 IQQHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAGEALRNLSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFG 186
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 121 RRSSR-SRS 128
R SR SRS
Sbjct: 193 RSHSRGSRS 201
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 121 RRSSR-SRS 128
R SR SRS
Sbjct: 193 RSHSRGSRS 201
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H++ F+ED+F E KYG+IE +NVCDNL DH+VGNVY++FR EE A AV +L R
Sbjct: 74 IQDHFEEFYEDLFDELS-KYGDIESLNVCDNLADHMVGNVYVQFREEEHAANAVRNLTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ +
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRQLFGK 187
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 121 RRSSR-SRS 128
R SR SRS
Sbjct: 193 RSHSRGSRS 201
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH+++F+EDVF E +GE+E +NVCDN DH+VGNVY KFR E+ A +A+ L R+
Sbjct: 76 QEHFEDFYEDVFEELA-AHGELENLNVCDNFADHMVGNVYAKFRDEDAAARALTALQGRY 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
+ GRP+ E SPVTDFREA CRQYE C R G+CNFMHLKPISRELR+ L+ R K
Sbjct: 135 YDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPISRELRKKLFGRYK 190
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMH+K I R+LR+ ++ KR
Sbjct: 133 FYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDLRKKMFGHYKRPY 192
Query: 121 RRSSRSRS 128
R SRS S
Sbjct: 193 RGRSRSPS 200
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LNNR
Sbjct: 68 LQEGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNNR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVKSL 178
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 98/131 (74%), Gaps = 3/131 (2%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q+++DNF+ED F+E C KYG ++EM+VCDN+GDHL+GNVY ++ E +A KA + LN+
Sbjct: 69 LQQNFDNFYEDFFIELC--KYGNLQEMHVCDNVGDHLMGNVYARYEYETEASKACDALND 126
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
+W+ +P+ AELSPV+DFREACCRQ EMGEC R GFCNFMHL S+ L L + ++ S
Sbjct: 127 KWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKSLVSSLQASQRLS 186
Query: 120 SRRSSRSRSRD 130
RR++ + D
Sbjct: 187 RRRNANNGGTD 197
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED+F E KYG++ EM+VCDN+GDHL+GNVY +++ E DA++AV+ LN+R
Sbjct: 69 LQAQFDAFYEDMFTELA-KYGQLVEMHVCDNVGDHLIGNVYARYKYEADAQRAVDALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ +P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ SR +R+ L
Sbjct: 128 WYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKEL 179
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED+F E KYGE++EM+VCDN+GDHL+GNVY +++ E DA+ AV+ LN+R
Sbjct: 69 LQAQFDEFYEDMFCELA-KYGELQEMHVCDNVGDHLIGNVYARYKYEADAQLAVDALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ +P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ S LR+ L
Sbjct: 128 WYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPLRKQL 179
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A KA++ L R
Sbjct: 74 IQQHFEDFYEDIFTELA-KFGEIESLNVCDNLADHMIGNVYVQFREEDQAAKALHALRGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ RP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R R
Sbjct: 133 FYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDLRRRLFGRNHRGG 192
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D F+ED+F E KYGE+ EM+VCDN+GDHL+GNVY +++ E DA+ AV+ LN+R
Sbjct: 69 LQQQFDAFYEDMFTELA-KYGELVEMHVCDNVGDHLIGNVYARYKYETDAQLAVDALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ G+P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ S R+ L
Sbjct: 128 WYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPTRKEL 179
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E K+G+IE +NVCDNL DH++GNVY++FR E+ A KA++ L+ R
Sbjct: 74 IQQHFEDFYEDIFTELA-KFGDIESLNVCDNLADHMIGNVYVQFREEDQAAKALHALHGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ RP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R R
Sbjct: 133 FYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDLRRRLFGRHHRGG 192
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H++ F+ED+F E +KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ +L+ R
Sbjct: 74 IQDHFEEFYEDLFQEL-NKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK I RELR L++
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGRELRHELFA 186
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 121 RRSSRSRSRD 130
RR+ + D
Sbjct: 188 RRAHKGAEVD 197
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 121 RRSSRSRSRD 130
RR+ + D
Sbjct: 188 RRAHKGAEVD 197
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY +F E +A+ AV++LN R
Sbjct: 68 LQEGFDAVYEDLYCEL-TKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDNLNER 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL++ L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELKKSL 178
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 121 RRSSRSRSRD 130
RR+ + D
Sbjct: 188 RRAHKGAEID 197
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D +ED++ E KYG + E++VCDN+GDHL+GNVY ++ E +A+ AV+ LNNR
Sbjct: 354 LQQDFDTTYEDLYCELA-KYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDALNNR 412
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S++L
Sbjct: 413 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKKL 460
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ +++ F+EDVF E KYG + EM+VCDN+GDHL+GNVY ++ E++A+ AV+ N R
Sbjct: 68 LASYFETFYEDVFCELV-KYGNLLEMHVCDNVGDHLIGNVYARYEWEDEAQIAVDAFNQR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ GRP++AELSPVTDFREACCRQ +MGEC R GFCNFMHLK L R L+++++
Sbjct: 127 WYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHAQQRVER 186
Query: 121 RRSSRSRSRD 130
+ + +R ++
Sbjct: 187 KLNPSARDQE 196
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFKEEDQAAAALQSLQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I ++LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDLRRKLFGR 187
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+++D +ED+++E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ LN+R
Sbjct: 68 LQDNFDQLYEDLYIELS-KFGHLLELHVCDNIGDHLIGNVYARYEWEAEAQAAVDALNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R G+CNFMHL+ S++L + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGYCNFMHLRIASKDLVKSL 178
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +++F+ED+F E KYGEIE ++VCDN DH++GNVY++FR E+ A +A+ L R
Sbjct: 74 IQADFEDFYEDIFEELS-KYGEIESLHVCDNFADHMIGNVYVQFREEDQAARALQALTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPV+DFREA CRQYE C R G+CNFMH+K I R+LR+ L+ RS
Sbjct: 133 YYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHLHRSR 192
Query: 121 RRSSRSRSR 129
R S RSR
Sbjct: 193 RSHSHGRSR 201
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYG IE +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGAIESLNVCDNLADHMVGNVYVQFREEEHAAAALQALTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
++ R + + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R +R
Sbjct: 133 FYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ +++ F+EDVF E KYG + EM+VCDN+GDHL+GNVY ++ E++A+ AV+ N R
Sbjct: 68 LTSYFETFYEDVFCELV-KYGNLLEMHVCDNVGDHLIGNVYARYDWEDEAQIAVDAFNQR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
W+ GRP++AELSPVTDFREACCRQ +MGEC R GFCNFMHLK L R L+++++
Sbjct: 127 WYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHAQQR 183
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +++F+ED+F E KYGEIE ++VCDN DH++GNVY++FR E+ A +A+ L R
Sbjct: 74 IQADFEDFYEDIFEELS-KYGEIESLHVCDNFADHMIGNVYVQFREEDQAARALQALTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ E SPV+DFREA CRQYE C R G+CNFMH+K I R+LR+ L+ RS
Sbjct: 133 YYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHLHRSR 192
Query: 121 RRSSRSRSR 129
R S RSR
Sbjct: 193 RSHSHGRSR 201
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E K+G +E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQQHFEDFYEDIFTEL-SKFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAALASLRGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I RELRR L+S ++R +
Sbjct: 133 FYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRELRRKLFSSQRREA 192
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL 178
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY +F E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S +L R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASADLVRSL 178
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL 178
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 73 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDNLNDR 131
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 132 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 179
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E KYG++E +N+CDNL DH+VGNVY++FR EE A A+++LN R
Sbjct: 74 VQDHFEDFYEDLFEELS-KYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E KYG++E +N+CDNL DH+VGNVY++FR EE A A+++LN R
Sbjct: 74 VQDHFEDFYEDLFEELS-KYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWEAEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 73/80 (91%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 70
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV++LNNRWF G+ V AE
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 71 LSPVTDFREACCRQYEMGEC 90
LSPVTDFRE+CCRQYEMG
Sbjct: 61 LSPVTDFRESCCRQYEMGTA 80
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGE+E +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGELESLNVCDNLADHMVGNVYVQFREEEQAANALRSLQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRE
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRE 179
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGE+E +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGELESLNVCDNLADHMVGNVYVQFREEEQAANALRSLQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRE
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRE 179
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQDGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ + +L R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPTPDLARSL 178
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHL+GNVY +F+ EEDA KA DLN+R
Sbjct: 68 LQNHFDAFYEDIWCE-MCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAAKACEDLNSR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RPVY ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 127 WYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELQLATKKWL 186
Query: 121 RRSSRSRS 128
+ RSRS
Sbjct: 187 KMKPRSRS 194
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 74 IQEHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRQ 179
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+ F++D++ E + +G+IE +NVCDNL DH++GNVY+K+R+E+ A KA+ +N R
Sbjct: 63 LQSHFQKFYKDIYEEL-NFFGDIENLNVCDNLSDHMIGNVYVKYRQEKSAMKALKSINGR 121
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
++ GR + AE SPVTDFRE+ CRQY+ C+R G+CNFMHLKPI R LR+ L++R +S
Sbjct: 122 FYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCNFMHLKPIKRSLRKELFTRVTKS 180
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F++D+F E KYG+IE +N+CDNL DH+VGNVY++FR E+ A A+ +LN R
Sbjct: 76 IQDHFEDFYQDLFEELS-KYGDIESLNICDNLADHMVGNVYVQFREEDHAANALRNLNGR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 135 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 182
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q +D FFED+F+E C K+G + EM+VCDN+GDHL+GNVY ++ E +A+ AV+ LN
Sbjct: 69 IQVDFDMFFEDLFMELC--KFGNLLEMHVCDNVGDHLIGNVYARYEWETEAQAAVDKLNE 126
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 118
RW+ GRP++ ELSPVTDFREACCRQ + G+C R GFCNFMHLK +R L R L +S+R
Sbjct: 127 RWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFCNFMHLKRPTRSLIRDLQHSQRLE 186
Query: 119 SSRRSSRSRSRD 130
R+ RD
Sbjct: 187 RKLRAHEQEDRD 198
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +++FFE+V+ E K+GEI EMNVCDNLGDHL+GNVY+KF EEDA+ A+ L R
Sbjct: 133 VQDDFEDFFEEVYQELS-KFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGR 191
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ RP+ E SPVTDFREA CRQ++ G C R G CNFMH+KP+ R + YL
Sbjct: 192 WYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYL 243
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 3/129 (2%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELELSTKKW 185
Query: 120 SRRSSRSRS 128
+ RSRS
Sbjct: 186 LKTRPRSRS 194
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPSPELLRQL 178
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D FF D F D YG + EM+VCDN+GDHL+GNVY ++ E+DA++AV+ LN R
Sbjct: 68 LQQQFDAFFSDFFKGLSD-YGTLIEMHVCDNVGDHLIGNVYARYETEDDAQRAVDGLNTR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
W+ RP++AELSPV+DFREACCRQ E EC R G CNFMHL+ S EL R LY +
Sbjct: 127 WYHQRPLFAELSPVSDFREACCRQNETNECNRGGQCNFMHLRYASPELVRELYQQ 181
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E KYG+IE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 76 IQDHFEDFYEDLFEELS-KYGDIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR L +
Sbjct: 135 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRWLSQ 184
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D F+ED+F E KYG+++ +NVC NLGDHLVGNVY+K+ RE++A +++ L R
Sbjct: 76 LQQHFDEFYEDIF-EGLTKYGQVDLLNVCANLGDHLVGNVYVKYAREDEANESIKGLKGR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS-RRKRS 119
++ GRP+ AE SPVTDF EA CRQY++G C R G+CNFMHL S+ L+ L+ RR RS
Sbjct: 135 FYDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYCNFMHLHTPSKSLQIKLFGDRRSRS 194
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E K+G +E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQQHFEDFYEDIFTELS-KFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAALASLRGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I RELRR L+
Sbjct: 133 FYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRELRRKLF 185
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+R
Sbjct: 68 LQNHFDAFYEDIWCE-MCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNSR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 127 WYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELELSTKKWL 186
Query: 121 RRSSRSRS 128
+ RSRS
Sbjct: 187 KMRPRSRS 194
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAVN+LN R++
Sbjct: 77 DHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVNELNGRFY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKRSS 120
G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R +K
Sbjct: 136 AGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRTVKRKLFRRMYKKYPE 195
Query: 121 RRSSRSRSRD 130
+ R+R D
Sbjct: 196 YKKRRARKDD 205
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 91/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGEIEE+ VCDN DHL+GNVY +F+ EEDA+KA + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKYEEDAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 186 LKERGRDARSVSRSPS 201
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +++F+ED+F E K+GE+E ++VCDNL DHL+GNVY++FR E+ A KA+ L R
Sbjct: 74 IQGDFEDFYEDIFDELS-KHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 133 FYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKQIGRDLRKRLYG 186
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S++L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKDL 174
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 24 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 82
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 83 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 135
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS +
Sbjct: 186 LKERGRDARSMSRSPT 201
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +++F+ED+F E K+GE+E ++VCDNL DHL+GNVY++FR E+ A KA+ L R
Sbjct: 74 IQGDFEDFYEDIFDELS-KHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 133 FYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDLRKRLYG 186
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS +
Sbjct: 186 LKERGRDARSMSRSPT 201
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS +
Sbjct: 186 LKERGRDARSMSRSPT 201
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GR + + SPVTDFREA CRQYE CTR G CNFMH+K I ++LR+ L+
Sbjct: 133 FYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDLRKKLFG 186
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S +L + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRNASPDLVKQL 178
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELDRELDMCTRKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS +
Sbjct: 186 LKERGRDARSMSRSPT 201
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GR + + SPVTDFREA CRQYE CTR G CNFMH+K I ++LR+ L+
Sbjct: 133 FYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDLRKKLFG 186
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 91 LQNHFDAFYEDIWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 148
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 149 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELERELQLATKKW 208
Query: 120 SRRSSRSRS 128
+ RSRS
Sbjct: 209 LKMKPRSRS 217
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGEVEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPGPELDRELELSTKKW 185
Query: 120 SRRSSRSRS 128
+ RSRS
Sbjct: 186 LKTRPRSRS 194
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH+++F+EDVF E ++GE+E +NVCDN DH+VGNVY KFR E+ A +A+ L R+
Sbjct: 76 QEHFEDFYEDVFEELA-QHGELENLNVCDNFADHMVGNVYAKFRDEDAAARALQALQGRY 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
+ GRP+ E SPVTDFREA CRQYE C R G+CNFMHLKPI RELRR L+ R
Sbjct: 135 YDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPIGRELRRKLFGR 188
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH+VGNVY++FR EE A A+ + R
Sbjct: 74 IQEHFEDFFEDIFEELS-KFGEIENLNICDNLADHMVGNVYVQFREEEQAAAALKAMQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
++ GRP+ + SPVTDFREA CRQ+E C R G+CNFMH+K I+++L
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNFMHVKKINKDL 180
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 93/131 (70%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ EEDA+KA ++LN
Sbjct: 68 LQTHFDGFYEDIWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKFEEDAQKACDELNQ 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K ++E+ R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNFIHRKEPTKEMDRDL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ R R +D
Sbjct: 182 TKKWLRIRGKD 192
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 63/120 (52%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D F+ED++ E KYG+++ +NVC NLGDHLVGNVY+K+++E+DA +++ L R
Sbjct: 76 LQQHFDEFYEDIY-EGLAKYGQVDLLNVCANLGDHLVGNVYVKYQKEDDANESIKGLKGR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ +E SPVTDF EA CRQY++G C R GFCNFMHL S+ L L+ RK S
Sbjct: 135 FYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSKSLYYKLFGDRKSRS 194
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H++ F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ +L R
Sbjct: 74 IQQHFEEFYEDLFEELR-KYGEIESLNVCDNLADHMVGNVYVQFREEEHASNALKNLTGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR 106
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK I R
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGR 178
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 91/130 (70%), Gaps = 5/130 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E +KYGE+EE+ VCDN DHL+GNVY +F+ EE A+ A LN+R
Sbjct: 69 LQNHFDAFYEDIWCE-MNKYGELEELVVCDNNNDHLIGNVYARFKYEESAQAASEALNSR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S E+ R L + ++
Sbjct: 128 WYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEMDRSL----ELAT 183
Query: 121 RRSSRSRSRD 130
++ R+R RD
Sbjct: 184 KKWLRARGRD 193
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D FFEDV+ E K+G + EM+VCDN+GDHL+GNVY ++ E++A+ A++ LN R
Sbjct: 84 LQDEFDQFFEDVYCELV-KFGHLLEMHVCDNVGDHLIGNVYARYDFEDEAQTAIDTLNTR 142
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF GRP++AELSPVTDFREA CRQ ++G C R GFCNF HL+ L + L ++R
Sbjct: 143 WFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFCNFHHLRKPRAALVKEL-DAQQRVE 201
Query: 121 RRSSRSR 127
RR + S+
Sbjct: 202 RRVNPSQ 208
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+R
Sbjct: 68 LQNHFDAFYEDIWCEL-CKYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNSR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 127 WYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKWL 186
Query: 121 R---RSSRSRSR 129
+ R RS SR
Sbjct: 187 KLRGRDERSMSR 198
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R +SRS S
Sbjct: 186 LKERGRDPRSASRSPS 201
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+EDV+ E C KYGE+EE+ +CDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 MQNHFDAFYEDVWCEMC--KYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R +SRS S
Sbjct: 186 LKERGRDPRSASRSPS 201
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R +SRS S
Sbjct: 186 LKERGRDPRSASRSPS 201
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 95/132 (71%), Gaps = 9/132 (6%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ F+E+VF+E KYGEIE+M VCDN+GDH++GNVY+K+R E A A++ L+ R++
Sbjct: 77 DHFEEFYEEVFLELM-KYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAAHAISMLSGRFY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR------- 115
GG+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R +RR L R
Sbjct: 136 GGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSVRRKLDERMYAEFPE 195
Query: 116 -RKRSSRRSSRS 126
+KR+ R S RS
Sbjct: 196 YKKRALRSSERS 207
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN
Sbjct: 70 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDAAQKACDELNG 127
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S
Sbjct: 128 RWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDELDRDL----TLS 183
Query: 120 SRRSSRSRSRD 130
+++ R+R RD
Sbjct: 184 TKKWLRARGRD 194
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 90/132 (68%), Gaps = 7/132 (5%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+D F+E+V+ E YG IEE++VCDNL DH++GNVY+KF EEDAEKA+ L +R++ G
Sbjct: 75 FDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVKFEDEEDAEKALKGLTHRYYAG 134
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL-------RRYLYSRRK 117
RP+ E SPVTDFREA CRQ+E G+CTR G+CNFMHL S+ + R+ Y+R +
Sbjct: 135 RPLAPEYSPVTDFREARCRQHEEGQCTRGGYCNFMHLMTPSQPVFYRCFPKGRWGYTRFE 194
Query: 118 RSSRRSSRSRSR 129
R + R R
Sbjct: 195 RLHDKGPRGDGR 206
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+EDV+ E C KYGE+EE+ +CDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 MQNHFDAFYEDVWCEMC--KYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R +SRS S
Sbjct: 186 LKERGRDPRSASRSPS 201
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QE ++ F EDVF E D+ GEIE +NVCDN+ DH++GNVY+KF EE A +AV L R+
Sbjct: 77 QEGFEAFVEDVFEEL-DECGEIEGVNVCDNVTDHMMGNVYVKFVEEEAAGRAVEKLRGRY 135
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
+ GRP+ AE SPVTDFRE+ CRQYE CTR G+CNFMHLKPI R +R+
Sbjct: 136 YDGRPIAAEFSPVTDFRESTCRQYEENSCTRGGYCNFMHLKPIGRGMRK 184
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E +K+GE+E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFG 186
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-GKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGR 187
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E +K+GE+E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFG 186
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 186 LKERGRDARSVSRSPS 201
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSAELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 186 LKERGRDARSVSRSPS 201
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEHY++F D+F E +GEIEE+NVCDNL DH+VGNVY+KF E+DA KA L+ R
Sbjct: 76 VQEHYEDFCHDIFEELA-IHGEIEELNVCDNLADHMVGNVYVKFADEDDAMKAKQSLDGR 134
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE-LRRYLYSR 115
++ GRP+ E SPVTDFRE+ CRQYE CTR G+CNFMH++PI + L L+ R
Sbjct: 135 YYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHVRPIKNQTLAHALFGR 190
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R++
Sbjct: 77 DHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R
Sbjct: 136 AGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKR 188
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDRELRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 186 LKERGRDARSVSRSPS 201
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNELDRDLRLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 186 LKERGRDARSVSRSPS 201
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ ++KA ++LN
Sbjct: 70 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDASQKACDELNG 127
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S
Sbjct: 128 RWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDELDRDL----TLS 183
Query: 120 SRRSSRSRSRD 130
+++ RSR RD
Sbjct: 184 TKKWLRSRGRD 194
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
+R R R +SRS +
Sbjct: 186 LKQRGRDERSASRSPT 201
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNFMHVKLVSRELRRKL 184
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 92/131 (70%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDL----QLS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKQRGRD 192
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EED++KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDREL----DMC 181
Query: 120 SRRSSRSRSRD 130
+R+ + R RD
Sbjct: 182 TRKWLKERGRD 192
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 92/133 (69%), Gaps = 6/133 (4%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 120 SR---RSSRSRSR 129
+ R RS SR
Sbjct: 186 LKLRGRDERSMSR 198
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+++FFE+VF E K+GE+EE+ V DN+GDH++GNVY+KF EE A+ A N LN R++
Sbjct: 78 HFEDFFEEVFGELA-KFGELEEVIVADNIGDHMIGNVYVKFVTEEQAQSAFNGLNGRYYA 136
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
GR + AE SPVTDFRE+ CRQY G+C R G+CNFMH K +S++L+R L+
Sbjct: 137 GRVILAEYSPVTDFRESKCRQYNEGQCDRGGYCNFMHPKHVSKDLKRALF 186
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKA+ +LN R++
Sbjct: 77 DHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAIKELNGRFY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R
Sbjct: 136 AGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKR 188
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 8/118 (6%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVY+K+ E A +AV L+ R++GGRP+ AE +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYVKYSDESAASRAVTSLSGRYYGGRPIQAEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--------RKRSSRRSSRSRS 128
EA CRQ+ G+C R G+CNFMH+K I R LRR L R +KRS R S R+RS
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHIPRSLRRKLMKRMYEEYPEYKKRSPRSSYRNRS 209
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D+F+ED+ E KYG+IE ++VC NLGDHL+GN+Y+K+ E+ A A+ L R
Sbjct: 73 IQKHFDDFYEDIH-EGLSKYGKIELLHVCANLGDHLIGNLYVKYSTEDAAAAAIEGLKGR 131
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
++ GRP+ AE SPVTDF E+ CRQ+++G C R GFCNFMHL SREL L+ R S
Sbjct: 132 FYDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFCNFMHLHNPSRELSVRLFGERAAS 190
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDL----TLS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKERGRD 192
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 7/130 (5%)
Query: 2 QEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LNNR
Sbjct: 69 QNHFDAFYEDLWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNNR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP+Y ELSPVTDFREACCR C R+GFCNF+H K S EL R L + S+
Sbjct: 127 WYAARPIYCELSPVTDFREACCRLNSGEGCARAGFCNFIHRKNPSEELDREL----QLST 182
Query: 121 RRSSRSRSRD 130
++ + R RD
Sbjct: 183 KKWLKMRGRD 192
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 92/133 (69%), Gaps = 6/133 (4%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDLWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR CTR GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFCNFIHRKNPSEELDRELVLATKKW 185
Query: 120 SR---RSSRSRSR 129
+ R RS SR
Sbjct: 186 LKMRGRDERSVSR 198
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIYEEL-GKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I ++LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR 187
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 91/136 (66%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
MQ H+D F+ED++ E C+ +G +EE+ VCDN DHL+GNVY++F+ EED++KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--FGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELERELDMCTRKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R SRS +
Sbjct: 186 LKERGRDPRSMSRSPT 201
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 6/133 (4%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+ E +++F+E+VF E C K+G++EE+N+CDNLGDHLVGNVY+K+ EE A A L
Sbjct: 123 VDEDFEDFYEEVFEELC--KFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYG 180
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR---YLYSRR 116
R++ GRP+ E SPVTDFREA CRQ++ G C R G+CNFMH+K +SR ++R LY+R
Sbjct: 181 RFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERLYNRY 240
Query: 117 KRSSRRSSRSRSR 129
K R SRS S+
Sbjct: 241 KPPRRGKSRSVSK 253
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR---ELRRYLYSRRK 117
++ GRP+ + SPVTDFREA CRQYE C R G+CNF H+K I + L+ +K
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFTHVKQIGTWEGSEEKTLWPLQK 192
Query: 118 RSSRRSSRSRSR 129
++R+ + + +
Sbjct: 193 ATTRQEPQPKPK 204
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 3/128 (2%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED F E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN
Sbjct: 68 LQNHFDAFYEDFFCEMC--KYGEVEEVVVCDNNNDHLIGNVYARFKYEEDAQTACDALNA 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S++L R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSKDLERELELGMKKW 185
Query: 120 SRRSSRSR 127
R R R
Sbjct: 186 LRARGRDR 193
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDL----TLS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKDRGRD 192
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDL----TLS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKDRGRD 192
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDL----TLS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKERGRD 192
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQAAADTLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDREL----TLS 181
Query: 120 SRRSSRSRSRD 130
+++ +SR RD
Sbjct: 182 TKKWLKSRGRD 192
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKVPSPELEREL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKMRGRD 192
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q H++ F ED+F E D+ GEIE +NVCDN DH+ GNVY+KF E+ A +A+ L R+
Sbjct: 78 QGHFEAFVEDLFEEL-DECGEIEGVNVCDNATDHMAGNVYVKFVDEDGARRALEKLQGRY 136
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
+ GRP+ E SPVTDF+E+ CRQYE CTR G+CNFMHL+PI R +R+ L R SS
Sbjct: 137 YDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCNFMHLRPIGRSMRKQLRRRATGSST 196
Query: 122 RSSRSR 127
+ +R
Sbjct: 197 MDASTR 202
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q +++F+ED+F E K+G +E ++VCDNL DHL+GNVY++FR E+ A +A+ L R
Sbjct: 74 IQGDFEDFYEDIFDELS-KHGVVESLHVCDNLADHLIGNVYVQFREEDQAARALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 133 FYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDLRKRLYG 186
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH++ F+ED+F E +K+GEIE +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQEHFEEFYEDIFEEL-NKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGR 187
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 6/133 (4%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C+ YGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDIWCELCQ--YGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+YAELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDRELVLSTKKW 185
Query: 120 SR---RSSRSRSR 129
+ R RS SR
Sbjct: 186 LKDRGRDERSPSR 198
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 68/73 (93%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 32 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 91
Query: 61 WFGGRPVYAELSP 73
WF G+P++AELSP
Sbjct: 92 WFNGQPIHAELSP 104
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D+F+E+V+ E KYGEIEE+NVC+NLGDH+VGNVY KF EE + ++ L R
Sbjct: 73 VQEEFDDFYEEVYDELA-KYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGR 131
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ GRP+ E SPVTDFREA CRQY+ CTR G+CNFMH++ SR LRR L R
Sbjct: 132 FYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEKR 186
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+H+D F+E+V+ E E K+G+IEE+NVC NLGDH++GNVY+K+ EE AEKA+N LN R+
Sbjct: 78 QDHFDEFYEEVYEELE-KFGKIEELNVCANLGDHMIGNVYVKYEEEEQAEKALNALNGRF 136
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 107
+ GR + AE SPVTDFRE+ CRQYE +C G CNFMH+K S+E
Sbjct: 137 YAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHCNFMHIKRPSKE 182
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ +CDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQMHFDAFYEDFWCEMC--KYGELEEVVICDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R+GFCNF+H K S EL R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFCNFIHRKNPSPELEREL----DMS 181
Query: 120 SRRSSRSRSRD 130
+R+ R R RD
Sbjct: 182 TRKWLRERGRD 192
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ EE A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEESAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL----ELA 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRERGRD 192
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 89/136 (65%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 IQNHFDAFYEDIWCEMC--KYGEIEEIVVCDNNNDHLIGNVYARFKYEDSAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
RW+ RPVY ELSPVTDFREACCR C R GFCNF+H K + EL+R L
Sbjct: 126 RWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPELQRELDLATKKW 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R SRS S
Sbjct: 186 LKERGRDERSVSRSPS 201
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDREL----ELA 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRERGRD 192
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 8/119 (6%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R++GGRP+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--------RKRSSRRSSRSRSR 129
EA CRQ+ G+C R G+CNFMH+K + R LRR L R ++RS R S R+RSR
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMKRMYEEFPEYKRRSPRGSHRNRSR 210
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ FF +VF E KYGE+E+M VCDN+GDH++GNVY+K+ EE A KA+ L R++
Sbjct: 77 DHFEAFFSEVFEELA-KYGEVEDMVVCDNIGDHIIGNVYVKYTDEEAANKALAALQGRFY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
G+ ++AE +PVTDFREA CRQ+ G+C R G+CNFMHLK + R L+R L+ +
Sbjct: 136 SGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRSLKRKLFKK 188
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKMRGRD 192
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 28 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 85
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 86 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL----ELS 141
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 142 TKKWLRLRGRD 152
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 39 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 96
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 97 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL----ELS 152
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 153 TKKWLRLRGRD 163
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K EL R L + +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPGPELEREL----ELA 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRERGRD 192
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDREL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRMRGRD 192
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRLRGRD 192
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H++ FF +VF E KYGE+E+M VCDN+GDH++GNVY+K+ ++ A+KA++ L R+
Sbjct: 77 DHFEAFFSEVFEELY-KYGEVEDMVVCDNIGDHIIGNVYVKYSDDDAAKKALSALQGRYD 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
G+P+ AE +PVTDFREA CRQ+ G+C R G+CNFMHLK + R L+R L+++
Sbjct: 136 AGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRSLKRKLFNK 188
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKLRGRD 192
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 129 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 186
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 187 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL----ELS 242
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 243 TKKWLKMRGRD 253
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL----DLS 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRLRGRD 192
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++F+ EE A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-GKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLF 185
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 87/132 (65%), Gaps = 4/132 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHL+GNVY +F+ E+ A A LN+R
Sbjct: 68 LQNHFDAFYEDIWCEL-CKYGELEELVVCDNNNDHLIGNVYARFKYEDSASAACEALNSR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 127 WYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRELTLSTKKWL 186
Query: 121 R---RSSRSRSR 129
+ R RS+SR
Sbjct: 187 KMRGRDERSQSR 198
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F+ED+F E +K+GE+E +NVC NL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCVNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ GRP+ A+ SPVTDFREA CRQYE C R G CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNFMHVKQISRELRRKLFG 186
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKMRGRD 192
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKASDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R + + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELDREI----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKWLRLRGRD 192
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 6/122 (4%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+ E +++F+E+VF E C K+G++EE+N+CDNLGDHLVGNVY K+ EE A A L
Sbjct: 129 VDEDFEDFYEEVFEELC--KFGKVEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKSLYG 186
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL---YSRR 116
R++ GRP+ E SPVTDFREA CRQ++ G C R G+CNFMH+K +SR ++R L ++R
Sbjct: 187 RFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVSRSMQRELERMFNRG 246
Query: 117 KR 118
KR
Sbjct: 247 KR 248
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R++ G+P+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
EA CRQ+ G+C R G+CNFMH+K + R ++R LY R
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHVPRSVKRKLYKR 188
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R++ G+P+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
EA CRQ+ G+C R G+CNFMH+K + R ++R LY R
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKR 188
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R++ G+P+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
EA CRQ+ G+C R G+CNFMH+K + R ++R LY R
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKR 188
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+D F+ED+ E KYG +E M+VC NLGDHL+GNVY+K+ EE A AV L R
Sbjct: 91 IQKHFDEFYEDLH-EGLSKYGRVELMHVCANLGDHLIGNVYVKYDTEEAAGAAVEGLRGR 149
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GRP+ AE SPVTDF E+ CRQ++MG C R G+CNFMHL S+ L L+ R+ S
Sbjct: 150 FYDGRPIVAEFSPVTDFNESRCRQFDMGTCDRGGYCNFMHLHLPSKPLSIKLFGDRRSPS 209
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL + L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEKEL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKMRGRD 192
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+++F+E+VF+E KYGE+EEM++CDN+G+HL+GNVY KF +E DA+KA+ LN R++
Sbjct: 65 HFESFYEEVFLELA-KYGEVEEMHICDNIGEHLLGNVYCKFIQELDADKAMRGLNGRYYA 123
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
G+ + E SPVTDF E+ CR Y G+C R G+CNFMHLK +++E +
Sbjct: 124 GKQIKVEFSPVTDFNESRCRLYVEGQCDRGGYCNFMHLKHMTKEFQ 169
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 86/130 (66%), Gaps = 5/130 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHL+GNVY +F+ E+ A A LN+R
Sbjct: 68 LQNHFDAFYEDIWCEL-CKYGELEELVVCDNNNDHLIGNVYARFKYEDSASAACEALNSR 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S+
Sbjct: 127 WYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDREL----TLST 182
Query: 121 RRSSRSRSRD 130
++ + R RD
Sbjct: 183 KKWLKMRGRD 192
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQNACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKLRGRD 192
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE+A A+ L+ R
Sbjct: 74 IQEHFEDFYEDMFEELS-KYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAALKALSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI--SRELRRYLYSRRKR 118
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHL+ I SR L +
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLRRIGSSRRPSATLSTSSGS 192
Query: 119 SSRRSSR 125
SRR R
Sbjct: 193 CSRRGWR 199
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 87/136 (63%), Gaps = 10/136 (7%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ E KYGE+EE+ VCDN DHLVGNVY +F+ EE A A + LN R
Sbjct: 67 LQNHFDAFYEDIWCEL-CKYGELEELVVCDNNNDHLVGNVYARFKYEESAASACDALNGR 125
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL--------RRYL 112
W+ RP+Y ELSPVTDFREACCR C R G+CNF+H K S EL +++L
Sbjct: 126 WYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYCNFIHRKNPSEELDNELQLATKKWL 185
Query: 113 YSRRKRSSRRSSRSRS 128
R R R SRS S
Sbjct: 186 -KLRGRDERSVSRSPS 200
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++ + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQGCDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL + L + S
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEKEL----ELS 181
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 182 TKKWLKMRGRD 192
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 6 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 63
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCN +H K S EL R L + S
Sbjct: 64 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNLIHRKEPSPELEREL----ELS 119
Query: 120 SRRSSRSRSRD 130
+++ + R RD
Sbjct: 120 TKKWLKMRGRD 130
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 8/119 (6%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R++GGRP+ E +PVTDFR
Sbjct: 92 KYGEIEDMIVCDNIGDHIIGNVYIKYSDEAAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--------RKRSSRRSSRSRSR 129
EA CRQ+ G+C R G+CNFMH+K + R LRR L +R +KR+ R S S R
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTRMYQEFPEYKKRTPRHRSASPYR 210
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ D F+EDVF E K+G++E + +C+N G+HL GNVY++FR EE A A+ LN R
Sbjct: 72 LQKDLDAFYEDVFKEV-SKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAMAALNGR 130
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
++ GRP+ AE SPVTDFREA CRQ E G C+R G CNF+HL SR L R L R S
Sbjct: 131 FYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYHPSRALMRELMGDRSSS 189
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%), Gaps = 8/120 (6%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVY+K+R E A A++ L+ R++GG+P+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAGLAISMLSGRFYGGKPIQCEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--------RKRSSRRSSRSRSRD 130
EA CRQ+ G+C R G+CNFMH+K + R +RR L R R+RS RRS S S D
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHVPRSVRRKLNERMYAEYPEYRRRSPRRSDCSASPD 211
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F++D + E C K+GE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYDDFWCEMC--KFGELEEVVVCDNNNDHLIGNVYARFKYEDAAQKACDELNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L + L + +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPDLEKEL----ELA 181
Query: 120 SRRSSRSRSRD 130
+++ R R RD
Sbjct: 182 TKKHLRIRGRD 192
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 75/97 (77%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R++GGRP+ E +PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYSDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
EA CRQ+ G+C R G+CNFMH+K + R LRR L +R
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTR 188
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ +H+ F+ED+++E K G +EEM VC+N DHL GN Y++FR +EDA++A + N R
Sbjct: 75 LDKHFALFYEDIYMEAA-KLGRLEEMIVCENGNDHLTGNTYLRFRNQEDAQRACDLFNTR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKRS 119
W+ GRPV+ ELSPV DF E+CCRQ++ EC+R CNFMH K R+L + L S+RK
Sbjct: 134 WYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMCNFMHAKRPPRQLAKDLDASQRKFY 193
Query: 120 SRRSSRSRSR 129
+R+ R R
Sbjct: 194 NRQRDRKSKR 203
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ D F+EDVF E K+G++E + +C+N G+HL GNVY++FR EE A A+ LN R
Sbjct: 75 LQKDLDAFYEDVFKEV-SKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAMAALNGR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
++ GRP+ AE SPVTDFREA CRQ E G C+R G CNF+HL SR L R L R S
Sbjct: 134 FYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYRPSRALMRELMGDRSSS 192
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+D+F+EDV+ E KYGEIEEM+VC+N+ +HL GNVYIKF+ E+ A++A+ +N R++
Sbjct: 80 HFDDFYEDVYDEL-SKYGEIEEMHVCENMSEHLTGNVYIKFKDEDAAQRALQAVNGRYYA 138
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRS 123
GR V+AE SPVTDFREA CR YE C R +CNFMH+K IS +L L+ RR+R
Sbjct: 139 GRMVHAEFSPVTDFREARCRPYERQLCDRGDYCNFMHIKRISDDLFNGLFRRRRRQRELP 198
Query: 124 SRSRS 128
+R S
Sbjct: 199 AREPS 203
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q +D F+ED F+E C KYG ++EM+VCDN+GDHL GNVY+++ E +A KAV LNN
Sbjct: 36 LQADFDRFYEDFFIELC--KYGNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNN 93
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSG 94
RW+G RP++AELSPV+DFREACCRQ E+GEC R G
Sbjct: 94 RWYGMRPLHAELSPVSDFREACCRQNELGECKREG 128
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q +D F+ED F+E C KYG ++EM+VCDN+GDHL GNVY+++ E +A KAV LNN
Sbjct: 69 LQADFDRFYEDFFIELC--KYGNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNN 126
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSG 94
RW+G RP++AELSPV+DFREACCRQ E+GEC R G
Sbjct: 127 RWYGMRPLHAELSPVSDFREACCRQNELGECKREG 161
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QE + FFED++VE K+G IE M+V DNLGDH++G+VY+KF EE A A+ +N R+
Sbjct: 77 QEDFFAFFEDLYVEFS-KFGRIEGMHVVDNLGDHMIGHVYVKFADEEQASDALQVMNGRY 135
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
+ GRP+ E SPVTDFREA CR Y+ +C R G+CNF+H KP+ R L + L
Sbjct: 136 YDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYCNFLHSKPVPRALLQSL 186
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+ ++ F+ED+F E +G+I+ + VCDNL DHL+GNVY+KF +++ A KA+ ++ R+
Sbjct: 76 QKQFEFFYEDLFQEMSF-FGDIDNIYVCDNLSDHLIGNVYVKFLKDKSAMKALKSVSGRF 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
+ R + AE SPVTDFRE+ CRQYE C R G+CNFMHLKP+ R R ++S +K
Sbjct: 135 YDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYCNFMHLKPLKRSFRNKIFSLKK 190
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+++FFE+V+ E K+GE+E M+VCDNLG+H++GNVY K+ EE+A++A LN R++ G
Sbjct: 151 FEDFFEEVYEELA-KFGEVEGMHVCDNLGEHMIGNVYAKYADEEEADEARQALNGRFYAG 209
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
R + E SPVTDFREA CRQY+ G+CT +CNF+H+K ISR LRR L
Sbjct: 210 RVLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHVKTISRALRRDL 257
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE+A A+ L+ R
Sbjct: 74 IQEHFEDFYEDMFEEL-SKYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAALKALSGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMH
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 172
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
HY+ F+E+VF+E YGEI+++ +CDN+GDH+ GNVY+K+ RE +A K + L R++
Sbjct: 137 HYEEFYEEVFLELAS-YGEIDDLIICDNIGDHMKGNVYVKYVRESEALKCLMSLKTRYYD 195
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
+ + E SPVTDF A C+QY G+C RSG+CN++H KPI R RR L+
Sbjct: 196 KQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRPFRRSLF 245
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 70/85 (82%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +D FF +V++E +++YGEI+EMNVCDN G+H++GNVYIKF E +A AV LNNRW
Sbjct: 75 QREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALNNRW 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYE 86
F G+P++ ELSPV+DFR+ACCRQYE
Sbjct: 135 FNGKPIHCELSPVSDFRDACCRQYE 159
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 74/97 (76%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGE+E+M VCDN+GDH++GNVY+K+ E A A++ L+ R++GG+ + E +PVTDFR
Sbjct: 92 KYGEVEDMIVCDNIGDHIIGNVYVKYSDEMSAANAISTLSGRFYGGKQIMVEYTPVTDFR 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
EA CRQ+ G+C R G+CNFMH+K + R LRR L ++
Sbjct: 152 EARCRQFVDGQCKRGGYCNFMHVKHVPRSLRRKLMNK 188
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 70/94 (74%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
K+G++EE+N+CDNLGDHLVGNVY K+ EE A A L R++ GRP+ E SPVTDFR
Sbjct: 90 KFGKLEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFR 149
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
EA CRQ++ G C R G+CNFMH+K + R ++R L
Sbjct: 150 EARCRQFDEGTCNRGGYCNFMHIKTVPRSMQREL 183
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH++ F+E+VF+E + YGEIE++ V DN+GDH++GNVY+K+ +EE AE + L R+
Sbjct: 76 QEHFEAFYEEVFLELAN-YGEIEDLAVVDNIGDHMIGNVYVKYVKEESAEMCIQKLTGRF 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 105
+ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 135 YAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHVP 178
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
Q +D FF+D+FV K+G+I ++ VC+N +HL GNVY+ F EDA A LN
Sbjct: 210 TQHDFDQFFQDIFVHI-SKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANLQLNQE 268
Query: 61 WFGGRPVYAELSPVTDFREACCRQYE-MGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
W+ GRPVY+ELSPV+DF EACC Y C R CN+MH++ SR+L + LY + +S
Sbjct: 269 WYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAMCNYMHIRLPSRDLEQSLYESQTKS 328
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH++ F+E+VF+E + YGEIE++ V DN+GDH++GNVY+K+ +EE +E + L R+
Sbjct: 76 QEHFEAFYEEVFLELAN-YGEIEDLAVVDNIGDHMIGNVYVKYVKEESSEMCIQKLTGRF 134
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 104
+ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 135 YAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+D+F++D+F+E G+I+E+ VC+N DHL GNVY+KF EE A KA + + RW+
Sbjct: 40 FDDFYKDIFIESS-LIGQIDELTVCENHNDHLNGNVYVKFNSEEAATKARDLFSTRWYNS 98
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRK 117
+P+Y ELSPV DFR + CRQ++ C R G CNFMH+K SR+L + L S+RK
Sbjct: 99 KPIYCELSPVVDFRGSTCRQHDSKTCDRGGMCNFMHVKRPSRDLLKTLKLSQRK 152
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAVAYNALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSG 94
++ GRP+ E SPVTDFREA CRQ+E C R G
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E +D F+ D++ GEIE+M VC+N HL GNVY+++ + A+KAV LN W+
Sbjct: 83 ESFDQFYADIYTHAAQS-GEIEQMVVCENENFHLCGNVYVRYSDTQSADKAVAQLNQEWY 141
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
GGRPVY ELSPV++F EA CR Y+ +C+R CNFMH + S ELR L +++S
Sbjct: 142 GGRPVYCELSPVSNFAEANCRAYDNNQCSRGDHCNFMHTRRPSSELRAQLRQAQRKS 198
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
F+E++F E KYGEI E+ +CDN+GDH++GNVYI+F EE A+ A+ +L + + G+P+
Sbjct: 82 FYEEIFKEL-SKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALLNLRGKLYAGKPI 140
Query: 68 YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
ELSPV+DF+EA CRQY G C R G+CNFMH+K + R ++ ++ +
Sbjct: 141 NIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQ 188
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE++D+F++D+F++ +GE+ M VC+N +HL GNVY+KF E+ A AV LN
Sbjct: 62 VQEYFDHFYKDIFLKFA-LFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNAVMLLNQE 120
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WFGGRPV+ ELSPV F +A CR YE C R CNFMH+ + +L+ L+ +++S+
Sbjct: 121 WFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCNFMHIHKPTPQLKSSLFKSQEKST 180
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
F+E++F E KYGEI E+ +CDN+GDH++GNVYI+F EE A+ A+ +L + + G+P+
Sbjct: 89 FYEEMFKEL-SKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALANLRGKMYAGKPI 147
Query: 68 YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
ELSPV+DF+EA CRQY G C R G+CNFMH+K + R ++ ++ +
Sbjct: 148 NIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQ 195
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N +
Sbjct: 77 EKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSELFAESCFNTLQNLSY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 136 ENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+ +D FF+D+FV K G+I ++ VC+N +HL GNVY+ F EDA A LN W
Sbjct: 208 QKDFDQFFQDIFVHIS-KLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEW 266
Query: 62 FGGRPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
F G+PVY++LSPV DF +ACC +Y + +C R CN+MH++ S ++ LY + +S
Sbjct: 267 FNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLYESQAKS 325
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+ +D FF+D+FV K G+I ++ VC+N +HL GNVY+ F EDA A LN W
Sbjct: 208 QKDFDQFFQDIFVHIS-KLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEW 266
Query: 62 FGGRPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
F G+PVY++LSPV DF +ACC +Y + +C R CN+MH++ S ++ LY + +S
Sbjct: 267 FNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLYESQAKS 325
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N +
Sbjct: 77 EKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSELFAESCFNALQNLSY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 136 ENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N +
Sbjct: 77 EKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSEYYAEGCFNALQNLSY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 136 ENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+++D FF+D+FV+ GEI+E+ VC+N +HL GNVY++F+ +++A +A LN
Sbjct: 68 LQQNFDQFFKDIFVKFAT-LGEIKELVVCENENNHLNGNVYVRFKTKQEAAEATLLLNQE 126
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF RPV+ ELSPV+ F EA CR YE CTR CNFMH++ ++ L L+ + +
Sbjct: 127 WFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESLFQSQTK 184
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
+E + FFED F E K+G +E +++CDNLGDH+VG+VY KF EE+A A+N +N R+
Sbjct: 81 REDFLVFFEDFFEEL-SKFGRLEALHICDNLGDHMVGHVYAKFSDEEEAADALNVMNGRF 139
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
+ GR + E SPVTDFREA CR ++ C R GFCNF+H+KP+ L R
Sbjct: 140 YDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFCNFLHIKPVPMCLIR 188
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D F++DVFV + GEI+ M VC+N DHL GNVY+KF + AE +N LN
Sbjct: 49 IQQRFDQFYQDVFVYIA-RIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEE 107
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
W+ P++ ELSPV F++A CR Y+ G C+R G CNFMH++ + E++ L+
Sbjct: 108 WYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLH 160
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D F++DVFV + GEI+ M VC+N DHL GNVY+KF + AE +N LN
Sbjct: 49 IQQRFDQFYQDVFVYIA-RIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEE 107
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
W+ P++ ELSPV F++A CR Y+ G C+R G CNFMH++ + E++ L+
Sbjct: 108 WYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLH 160
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 69 MQEHFEDFYEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 127
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG 88
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 128 FYSGRPIIVDFSPVTDFREATCRQLGLG 155
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+ED+F E K+GEI+EM VC NL +H+ GNVY++FR E++A +A+ L R++ G
Sbjct: 76 FNIFYEDIFNELA-KHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAG 134
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 122
R + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+ +R
Sbjct: 135 RMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKR 192
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N +
Sbjct: 77 EKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSEYYAEGCFNALQNLSY 135
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
+P+ E SPV DF A C+QY G C R G CN++HLK I+ + ++ L+++
Sbjct: 136 ENKPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIATKFKKSLFNQ 188
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+ED+F E K+GEI+EM VC NL +H+ GNVY++FR E++A +A+ L R++ G
Sbjct: 76 FNIFYEDIFNELA-KHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAG 134
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 122
R + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+ +R
Sbjct: 135 RMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKR 192
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q H + F+++V++E YGE+E+M V DN+ DH++GN+Y+++ REEDAE A L+NR+
Sbjct: 79 QAHCEAFYQEVWLEL-SSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAAQKLSNRF 137
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
+G R + E SPV +F EA CR Y C R G CNFMH K I + +RR
Sbjct: 138 YGTRLIQVEYSPVANFSEARCRTYHETRCARGGLCNFMHTKHIPKAIRR 186
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D F++DVF K GEI+ + VC+N+ +HL GNVY++F R ++A +A LN+
Sbjct: 318 IQEKFDLFYKDVFTHI-SKLGEIKNLVVCENVNNHLNGNVYVQFVRTQEASEASKQLNSE 376
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WF RPVY+ LSPV DF EA C +Y +G C CN+MHL+ + +L + +Y +++S
Sbjct: 377 WFNERPVYSTLSPVRDFEEAYCHEYSVGACEHGERCNYMHLRYPTPDLEQKMYRSQEKS 435
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE D FF+DVF+ K GE+ + VC+N +HL GNVY++F E+DA++A +LN
Sbjct: 106 LQESLDLFFQDVFIHLSQK-GEVASLVVCENENNHLNGNVYVRFYSEKDAQQANQELNQE 164
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY--SRRKR 118
WF GRPV+++LSPV F EA CR Y+ C R CN+MHL+ ++ L L +K
Sbjct: 165 WFNGRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCNYMHLRLPTKSLLDKLTQGQEKKY 224
Query: 119 SSRRSSRSRS 128
+S+R R ++
Sbjct: 225 ASKRLERLKT 234
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D F++D+F+ + GEI + VC+N +HL GNVY++F DA LN
Sbjct: 100 IQEQFDLFYQDIFIHLAN-MGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQE 158
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF GRPV+++LSPVTDF +A CR Y+ C R CN+MH++ S +LR LY + +
Sbjct: 159 WFNGRPVHSDLSPVTDFADARCRAYDTNSCERGEMCNYMHIRQPSPKLRELLYKAQDK 216
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+ED+F E K+GE++EM VC NL +H+ GNVY++FR E++A +A+ L R++ G
Sbjct: 76 FNIFYEDIFNELA-KHGEVDEMLVCGNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAG 134
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 122
R + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+ +R
Sbjct: 135 RMIQPSYSHVTDFKEARCKQYECGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKR 192
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE++D F+ DVFV + I +++VC+N DHL GNVY++F EEDA LN+
Sbjct: 132 IQEYFDQFYADVFVHI-SQMRPIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVNRQLNSE 190
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
WF RPVY+ELSPV+DF EA CR Y+ G C R G CN+MH++ + EL L+ +++S+
Sbjct: 191 WFNERPVYSELSPVSDFEEAHCRAYDNGGCDRGGRCNYMHVRQPTEELFDELFRCQQKSA 250
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG 88
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLG 160
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG 88
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLG 160
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++ +D+FVE YG IE++ +C+N HL GNVYIKF +E A +LNNRW+
Sbjct: 122 ERFNKLLQDIFVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWY 181
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLK 102
GRP+Y+ELSPV F EA CR+++ G C R CN+MH+K
Sbjct: 182 NGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCNYMHIK 221
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E ++ +D+FVE YG IE++ +C+N HL GNVYIKF +E A +LNNRW+
Sbjct: 118 ERFNKLLQDIFVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWY 177
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLK 102
GRP+Y+ELSPV F EA CR+++ G C R CN+MH+K
Sbjct: 178 NGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCNYMHIK 217
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG 88
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLG 160
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D F+ D+FV GEI ++ VC+N +HL GNVY++++ E DA +++ LN+
Sbjct: 75 IQEIFDQFYRDIFVHFATT-GEISQLVVCENENNHLNGNVYVRYKSETDASESMKQLNSE 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WF GRPV+ ELSPV F EA CR YE C+R CN+MH++ +++L L+ ++++
Sbjct: 134 WFNGRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNYMHVRKPTKKLADDLFKAQEKT 192
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 77/110 (70%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 78
KYGEI ++ VCDN+GDH++GNVY+++ EE A+ A++ L R + G+ + AELSPV+DF+
Sbjct: 92 KYGEISDLLVCDNIGDHMIGNVYVRYTNEEYAKSALDKLKGRSYSGKLIDAELSPVSDFK 151
Query: 79 EACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
EA CRQ+ G C R G+CNFMH+K I R ++ ++ + R S+ +S
Sbjct: 152 EARCRQFIDGCCNRGGYCNFMHIKHIPRCVKNKIFQQMYRDHPEYSKKKS 201
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
M+ ++ F+EDVF + ++ YGE+EE VC N DH++GNVY+K+ +EE+A+KA ++L R
Sbjct: 73 MRHDFNEFYEDVFSQIQN-YGEVEEFIVCGNDNDHMMGNVYVKYTKEEEAKKAKDELTGR 131
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ G+ + VTDFREA CRQ E G CTR G CNF+H+ L+R L++
Sbjct: 132 YYAGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQCNFIHVIEPDPSLKRGLFA 185
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ +D +ED+++E ++G + M +C+N DHL GNVY+ + RE+DAE A N+ N RWF
Sbjct: 12 QDFDALYEDIYMEAC-RFGPVRSMVICENRNDHLKGNVYLYYEREQDAEDAKNNFNTRWF 70
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKRSSR 121
RP+Y +L+ V DFREA CR++++G C R G CNFMH++ S ++R L S+ K
Sbjct: 71 DERPLYCDLTHVADFREAVCRKHDLGTCERGGDCNFMHVRRPSTKIRIDLEKSQAKHWQF 130
Query: 122 RSSRSRS 128
+ RS+S
Sbjct: 131 ETKRSKS 137
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++E+++NF++DVF+ K EI + VC+N +HL GNVY +F+ EE A +AV +LN
Sbjct: 58 IREYFENFYKDVFIRL-GKIEEIAALVVCENENNHLNGNVYCRFKNEEGARRAVVELNQE 116
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
WFG RPV+ ELSPV F +A CR Y+ C+R CNFMH+ S EL R L+S + +S
Sbjct: 117 WFGSRPVHCELSPVQSFHDANCRDYDTNSCSRD-HCNFMHVIRPSDELERQLFSAQAKS 174
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 58/65 (89%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 100
Query: 67 VYAEL 71
V+AEL
Sbjct: 101 VHAEL 105
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +D F+EDV++E K+GE++ M VC+N DHL GNVY+ F DA A + N RW
Sbjct: 69 QRDFDAFYEDVYMEA-CKFGELQAMVVCENKNDHLNGNVYLMFTNSRDANSAKDSFNTRW 127
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
F RP+Y E S V+DFREA CR+++M C R CNFMH++ +R+L+
Sbjct: 128 FNERPLYCEFSHVSDFREAICRKHDMRSCERGDECNFMHVQRPTRDLQ 175
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E +++F+EDVF+E ++GE++E+ VC+N DHL GNVYI++ + A+ A + L R
Sbjct: 42 LTEDFESFYEDVFLEAA-RFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITR 100
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
W+G RP+Y +LS VTDFREA C+ YE G C R CNF+H + I + L + +S
Sbjct: 101 WYGERPLYCDLSHVTDFREAVCKSYEEGTCDRGEQCNFIHRRIIGYHIANGLMLSQWKSR 160
Query: 121 RRSSRSRS 128
+ RS
Sbjct: 161 HIMPQHRS 168
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD+ +ED+++E KYG I EM +CDN DHL GNVY+++ E++A A N+LN RWF G
Sbjct: 102 YDSIYEDLYIELA-KYGRIMEMYICDNGNDHLRGNVYVRYSSEQNARDANNELNTRWFNG 160
Query: 65 RPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHLKPISRELRRYL 112
+P+Y +L+ + DF EA CR+ E C R CNFMH++ S +L+ L
Sbjct: 161 KPIYCDLTHIHDFGEAICRKPEEKSGCERGDHCNFMHIRKPSPQLQTDL 209
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+QE +D F++D+F+ GEI ++ VC+N +HL GNVY++F DA LN
Sbjct: 129 IQEQFDLFYQDIFIHL-GSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTALNQE 187
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
WF GRPV+++LSPV F +A CR Y+ C R CN+MH++ + L++ LY + +
Sbjct: 188 WFNGRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCNYMHIRQPTTSLKQSLYKAQDK 245
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E +D F+EDVF+E K+GE++E+ VC+N DHL GNVYI+F + A+ A + RW+
Sbjct: 109 EDFDFFYEDVFLEAA-KFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAARDAFVTRWY 167
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
G RP+Y +LS VTDFREA C+ YE G+C R CNF+H
Sbjct: 168 GERPLYCDLSHVTDFREAVCKSYEEGKCGRGEQCNFIH 205
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 58/80 (72%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYE 86
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICGPFP 120
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +L+NRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQY 85
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICDPF 119
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+D F++D+FV K G+I +M VC+N +HL G+VY+KF EDA A LN W+ G
Sbjct: 211 FDLFYQDIFVHIA-KLGQINDMAVCEN-ENHLSGHVYVKFNDYEDAYNANLQLNQEWYNG 268
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
RP+Y+ELSPV +A C ++ G C R CN++H+K ++ +++ LY + +S
Sbjct: 269 RPIYSELSPVNSISDAHCSAWDHGHCNRGATCNYLHVKQPTQGMKKSLYDSQSKS 323
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 58/80 (72%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYE 86
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICGPFP 120
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 75/135 (55%), Gaps = 28/135 (20%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H+D F+ED++ +L+GNVY +F+ E+ A+KA + LN+R
Sbjct: 18 LQNHFDAFYEDLW---------------------YLIGNVYARFKYEDSAQKACDALNSR 56
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-------Y 113
W+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 57 WYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDLELSTKKWL 116
Query: 114 SRRKRSSRRSSRSRS 128
R R R +SRS S
Sbjct: 117 KMRGRDERSASRSPS 131
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDVF E ++ GEI+EM VC NL +H++GNV+++F + AE A+ L R++GG
Sbjct: 76 FNVFYEDVFNELAER-GEIDEMIVCANLNEHMLGNVFVRFHDVKGAESAMKILLARYYGG 134
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 122
R + S VTDFR+A C+Q E G C R GFCNF+H+ + L+R L R+ +R
Sbjct: 135 RMIQPSYSHVTDFRDAKCKQQEAGNCERGGFCNFIHVLEPNHALKRKLLERQPLRRQR 192
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYE 86
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICGPFP 120
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 57/80 (71%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED + AV +LNNRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYE 86
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICSPFP 120
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q +++F+EDV++E ++G + M VC+N DHL GNVY+ F +A++A++D N RW
Sbjct: 68 QSSFEDFYEDVYIE-ACRFGAVRSMVVCENGNDHLKGNVYLHFEHPNEAQRAMDDFNTRW 126
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 121
+ RP+Y +L+ + DFR+A CR+++ C R CNFMH++ S+ L+ L +RS
Sbjct: 127 YDERPIYCDLTHIVDFRDAICRRHDQQACERGDECNFMHIRRPSQGLKIDL----ERSQT 182
Query: 122 RSSRS 126
SRS
Sbjct: 183 SKSRS 187
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
F ++VF E ++KYGEIEEMNVCDNLGDH+VGNVY+KFRREED E+AV +L+NRWF G+
Sbjct: 41 TFSQEVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNRWFNGQA 100
Query: 67 VYAELSPVTDFREACCRQYE 86
V+ + V C +
Sbjct: 101 VHGNVPEVASATSCICGPFP 120
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D F++D+FV K G+I +M VC+N +HL G+VYIKF DA A LN
Sbjct: 214 IQKDFDLFYQDIFVHVA-KLGQINDMAVCEN-ENHLSGHVYIKFNDYNDAIAANLQLNQE 271
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
W+ G+PVY+ELSPV +A C+ ++ G C R CN++H+K ++ +++ L+ + ++
Sbjct: 272 WYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGIKKSLWDSQTKT 330
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+ +D F++D+FV K G+I +M VC+N +HL G+VYIKF DA A LN
Sbjct: 214 IQKDFDLFYQDIFVHVA-KLGQINDMAVCEN-ENHLSGHVYIKFNDYNDAIAANLQLNQE 271
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
W+ G+PVY+ELSPV +A C+ ++ G C R CN++H+K ++ +++ L+ + ++
Sbjct: 272 WYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGIKKSLWDSQTKT 330
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 52/56 (92%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 73
+KYGE+EEMNVCDNL DHLVGNVY++FR EEDAEKAV DL+NRWF G+P+YAELSP
Sbjct: 66 EKYGEVEEMNVCDNLRDHLVGNVYVQFRPEEDAEKAVMDLDNRWFNGQPIYAELSP 121
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F++DVFV G+++ M VC+N +HL GNVYIKF + A AV LN
Sbjct: 67 LQQHFEDFYKDVFVRAA-TLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLNQE 125
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
W+ GRPVY ELSPV +A CR Y+ C+R CNFMH++ S L+ +L+ +++S
Sbjct: 126 WYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKNFLFRAQEKS 184
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q+H+++F++DVFV G+++ M VC+N +HL GNVYIKF + A AV LN
Sbjct: 67 LQQHFEDFYKDVFVRAA-TLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYDAVVKLNQE 125
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 119
W+ GRPVY ELSPV +A CR Y+ C+R CNFMH++ S L+ +L+ +++S
Sbjct: 126 WYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKSFLFRAQEKS 184
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 18/113 (15%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
+EH+++FFED+ E + +G +E+++VCDN G EKA+ L R+
Sbjct: 50 EEHFNDFFEDIHDELRN-FGRLEDLHVCDNTG-----------------EKAMKALTGRF 91
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
+GGR + E SPVTDFREA CRQY+ EC R G CNFMHLK + EL R L+
Sbjct: 92 YGGRLLVPEFSPVTDFREARCRQYDSNECNRGGQCNFMHLKQVDPELERRLFG 144
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMN-VCDNLGDHLVGN-VYIKFRREEDAEKAVNDLNNR 60
+H++ F+E+VF E EIE+ VCDN GDH + + E+ AEKA+ +LN R
Sbjct: 77 DHFEEFYEEVFDEL--MKXEIEDXGXVCDN-GDHXYWKCLXLNIHXEDYAEKAIKELNGR 133
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 115
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKR 188
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 52/60 (86%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 192 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 251
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 53/60 (88%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q+++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NRW
Sbjct: 92 QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKDLQNRW 151
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 5 YDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
+D ++EDVF+E C K+G+I+ + +N DHL GNVY + A++A + LN RW+
Sbjct: 70 FDGYYEDVFIELC--KFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNTRWYN 127
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
+P+Y++L+ + DF +A CR+Y++G C R CNFMH++ S L+ L
Sbjct: 128 EKPLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRPSPSLKSDL 176
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
+E + +F+ED + E K+G IE +++CDNLGDH++G+ Y KF EE+A A+N +N R+
Sbjct: 16 KEDFLSFYEDFYEELS-KFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNVMNGRY 74
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGF 95
+ GR + E SPV DFREA CR ++ C R GF
Sbjct: 75 YDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 80 FNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYYAK 138
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 139 KILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 183
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
+++H+++F+++V F+E +G I E+ V NLGDHL+GNVYI+F + A + VN+L
Sbjct: 65 LKKHFEHFYKEVWRTFME----FGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRIVNEL 120
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
+ V ELSPVT+F EACC++ C R CN++H+ +SR L
Sbjct: 121 RGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQCNYLHIMKVSRRL 171
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 79 FNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYYAK 137
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 138 KILAPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 182
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA +L
Sbjct: 63 LKRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIAREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL----- 112
+ + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 119 KAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIVKVSRKLMEKLEKEQA 178
Query: 113 --YSRRKRSSRRSSRSRSR 129
+ ++++ SR S R R R
Sbjct: 179 KYWKKKEKHSRGSDRKRER 197
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 80 FNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYYAK 138
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 109
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 139 KILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 183
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
+E + +F+ED + E K+G IE +++CDNLGDH++G+ Y KF EE+A A+N +N R+
Sbjct: 81 KEDFLSFYEDFYEELS-KFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNVMNGRY 139
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGF 95
+ GR + E SPV DFREA CR ++ C R G
Sbjct: 140 YDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGI 173
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA +L
Sbjct: 63 LKRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIAREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL----- 112
+ + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 119 KAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQA 178
Query: 113 --YSRRKRSSRRSSRSRSR 129
+ ++++ SR S R R R
Sbjct: 179 KYWKKKEKHSRGSDRKRER 197
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA +L
Sbjct: 63 LKRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIAREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL----- 112
+ + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 119 KAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQA 178
Query: 113 --YSRRKRSSRRSSRSRSR 129
+ ++++ SR S R R R
Sbjct: 179 KYWKKKEKHSRVSDRKRER 197
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 15/140 (10%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
+++H++ F+++ F+E G I E+ V NLGDHL+GNVYI+F +A + V +L
Sbjct: 63 LRQHFERFYKETWRTFME----LGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVVREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL--------R 109
+ + ELSPVT+F +ACC++ G C R CN++H+ +SR+L
Sbjct: 119 KAKKLNNIVLLPELSPVTNFADACCKEDLEGNCERGSQCNYLHIMKVSRKLMEKLEKEQA 178
Query: 110 RYLYSRRKRSSRRSSRSRSR 129
+Y + K S SSR R R
Sbjct: 179 KYRKKKDKHSGSTSSRKRER 198
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
+++H+++F+++V F+E +G I E+ V NLGDHL+GNVYI+F + A + V +L
Sbjct: 65 LKKHFEHFYKEVWRTFME----FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKEL 120
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL--------R 109
+ V ELSPVT+F EACC++ C R CN++H+ +SR L
Sbjct: 121 RGKKLNDVIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLEKEQS 180
Query: 110 RYLYSRRKR-----SSRRSSRSRS 128
+Y + KR R+ SRSRS
Sbjct: 181 KYWKKKEKRHEHDSGDRKRSRSRS 204
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA + V +L
Sbjct: 63 LRRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRIVREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
+ + ELSPVT+F EACC++ G+C R CN++H+ +SR+L L
Sbjct: 119 KAKKLNDIVLLPELSPVTNFAEACCKEDLEGKCERGPQCNYLHIMKVSRKLMEKL 173
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
+++H+++F+++V F+E +G I E+ V NLGDHL+GNVYI+F + A + V +L
Sbjct: 65 LKKHFEHFYKEVWRTFME----FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKEL 120
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
+ V ELSPVT+F EACC++ C R CN++H+ +SR L L +
Sbjct: 121 RGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLEKEQS 180
Query: 118 RSSRRSSR 125
+ ++ R
Sbjct: 181 KYWKKKER 188
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYG-EIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
++E ++NF+ D+F E E K G +IE++ +CDN +H+ GNVYI DA+K L
Sbjct: 64 IKEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLASIPDAQKCYELLKG 123
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMHLKPISRELRRYLYSRR 116
++ GR + E SPV DF EA C+ ++ G C + CN +H+ S EL ++L+ R
Sbjct: 124 KYHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGANCNNLHVLRPSEELAKHLFGER 183
Query: 117 KRSSRR 122
S ++
Sbjct: 184 YESYKQ 189
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
+++H+++F+++V F+E +G I E+ V NLGDHL+GNVYI+F + A + V +L
Sbjct: 65 LKKHFEHFYKEVWRTFME----FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKEL 120
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
+ V ELSPVT+F EACC++ C R CN++H+ +SR L
Sbjct: 121 RGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRL 171
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 14/139 (10%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F +A +L
Sbjct: 63 LKRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEEAAEASHIAREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL----- 112
+ + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 119 KAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQA 178
Query: 113 --YSRRKRSSRRSSRSRSR 129
+ ++++ SR R R R
Sbjct: 179 KYWKKKEKHSRGGDRKRER 197
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 1 MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA + V +L
Sbjct: 63 LRRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEESSDAARIVREL 118
Query: 58 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
+ + E+SPVT+F +ACC++ G+C R CN++H+ +SR+L
Sbjct: 119 KAKKLNEIILLPEISPVTNFADACCKEDLEGKCERGTQCNYLHIMKVSRKL 169
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++ ++D F+ DV+ E +G I E V NL +HL+GNV + + E+A A N+L R
Sbjct: 47 IRNNFDEFYLDVYEELR-TFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGR 105
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
++GGRP+ + SPV +F A CRQ++ G+C + CNF+H
Sbjct: 106 YYGGRPIDVQFSPVVNFNVAVCRQFKEGKCPHNEKCNFIH 145
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 71/136 (52%), Gaps = 35/136 (25%)
Query: 1 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 60 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------- 112
R G C R GFCNF+H K S EL R L
Sbjct: 126 RCGEG-------------------------CVRGGFCNFIHRKDPSNELDRDLRLSTKKW 160
Query: 113 YSRRKRSSRRSSRSRS 128
R R +R SRS S
Sbjct: 161 LKERGRDARSVSRSPS 176
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QE Y++FF D++ C +G++ +M V +N HL GNV +KF E AE+A+ L +
Sbjct: 52 QEQYEHFFFDLYTLCSG-FGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQL 110
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE---LRRY-----LY 113
FG + + D +E+ C+Q++MG C + CN++H+ PI + L Y L
Sbjct: 111 FGSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQFASLESYGYPSTLV 170
Query: 114 SRRKRSSRRSSRSR 127
R KR S +S+
Sbjct: 171 KREKRLSWEMPQSQ 184
>gi|119629908|gb|EAX09503.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_c
[Homo sapiens]
Length = 128
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF 44
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+K
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKV 44
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 224 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 282
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 283 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 321
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 260 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 318
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 319 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 357
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 239 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 297
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 298 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 264 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 322
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 323 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 239 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 297
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 298 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 221 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 279
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 280 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 239 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 297
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 298 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 231 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 289
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 290 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 328
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 245 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 303
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 304 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 342
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 205 QQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 263
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E+ PVT ++ A C +E+ +C R CNF+H+
Sbjct: 264 AGRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCNFLHV 302
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 221 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 279
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 280 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 232 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 290
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 291 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 249 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 307
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 308 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 468 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 526
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT + A C +E+ +C R +CNF+H+
Sbjct: 527 AGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 565
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 232 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 290
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 291 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 233 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 249 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 307
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 308 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 264 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 322
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 323 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 49 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 107
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 108 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 249 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 307
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 308 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 51 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 109
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 110 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 148
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 49 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 107
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 108 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++ + F+ D++ E + GEI E +C N HL GNVY++++ EE+ KA + R
Sbjct: 207 LRSQFIEFYNDIYPEFQ-AAGEIREFKICCNYEPHLRGNVYVEYQSEEECHKAFRMFHGR 265
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKR 118
W+ R ++ + SPV +++ A C + C + CNF+H+ P+++ R R +R
Sbjct: 266 WYAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCNFLHVFENPVAQSTRSAFNDRHRR 325
Query: 119 SSRRSSRS 126
S ++RS
Sbjct: 326 HSFNNNRS 333
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 227 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 285
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT + A C +E+ +C R +CNF+H+
Sbjct: 286 AGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 324
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 96 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 154
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 155 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 193
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 49 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 107
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 108 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 224 QQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 282
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C YEM +C + CNF+H+
Sbjct: 283 AGRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCNFLHV 321
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A + N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAFSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 232 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFNGRWY 290
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 291 AGRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 233 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 363 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 421
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 422 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 460
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 237 QQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFNGRWY 295
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 296 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 237 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 295
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 296 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QE Y++FF D++ C +G++ +M V +N HL GNV +KF E A +AV L +
Sbjct: 52 QEQYEHFFFDLYTLCSG-FGQVVDMIVSENQAPHLKGNVLVKFATEAMAAEAVKHLQGQL 110
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE---LRRYLYSRR-- 116
F + + D +E+ C+Q++MG C + CN++H+ PI + L Y Y
Sbjct: 111 FSSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQFASLESYGYPSTLV 170
Query: 117 KRSSRRS 123
KR R S
Sbjct: 171 KREKRLS 177
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 262 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 320
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 321 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 359
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 233 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 282 QQFLDFYHDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSLFNGRWY 340
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 341 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 379
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 288 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 346
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 347 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 385
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E + G++ + V NL HL GNVY++++ +E+ + A++ N RW+
Sbjct: 217 QQFLDFYEDVLPEFRN-VGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQAALSLFNGRWY 275
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 276 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 314
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A+ N RW+
Sbjct: 241 QQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWY 299
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 300 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 338
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 167 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 225
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 226 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 264
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 233 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW
Sbjct: 70 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWH 128
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 129 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 167
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 229 QQFLDFYDDVLPEFKN-VGKVIKFKVSCNLEPHLRGNVYVQYQSEEECQTALSVFNGRWY 287
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 AGRQLQCEFCPVTRWKMAICGLFEIKQCPRGRHCNFLHV 326
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 225 QQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 283
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 284 AGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 225 QQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 283
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 284 AGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 225 QQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 283
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 284 AGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+
Sbjct: 226 QQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWY 284
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 285 AGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 323
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 234 QQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 331
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A + N RW+
Sbjct: 233 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQTEEECQTAFSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E + G++ + V N+ HL GNVY++++ EE+ + A + N RW+
Sbjct: 229 QQFLDFYEDVLPEFRN-VGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQAARSLFNGRWY 287
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 326
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 238 QQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWY 296
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 297 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 238 QQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWY 296
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 297 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H D F+ED F E KYG I ++ + N ++GN+YI+F EE A + ++ R
Sbjct: 58 VQIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++GG+ + AEL + C ++E G C + C F+H +SR L L + +
Sbjct: 118 YYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELLASQALLY 177
Query: 121 RRSS 124
R+S
Sbjct: 178 PRTS 181
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
++ F+EDV E + YGE+ ++ VC N HL GNVY+++R EE+A KA R++G
Sbjct: 247 NFHEFYEDVLPEFRE-YGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAAQVFAGRFYG 305
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
G+ + PV+ ++ A C + +C R CNF+H+
Sbjct: 306 GKQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCNFLHV 343
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 30 QQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWY 88
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 89 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 127
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H D F+ED F E KYG I ++ + N ++GN+YI+F EE A + ++ R
Sbjct: 58 VQIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 108
++GG+ + AEL + C ++E G C + C F+H +SR L
Sbjct: 118 YYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSL 165
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N RW+
Sbjct: 195 QQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWY 253
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 254 AGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 292
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+D+ ++D+F+E K+G+I + + N D L GNVYIK+ + A A+N+ N RW+
Sbjct: 104 FDSIYQDIFLEAM-KFGKILSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWYDE 162
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 117
RP+Y +L ++ E CR+Y+ G C R C +H + S L+ L S +K
Sbjct: 163 RPIYCDL---VNYNEGTCRRYDNGNCARGPECTLLHRRWPSSRLKWDLESSQK 212
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ A++ N RW+
Sbjct: 254 QQFLDFYHDVVPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHAALSLFNGRWY 312
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 313 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 351
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ + RW+
Sbjct: 406 QQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWY 464
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 465 AGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 503
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ ++A + N RW+
Sbjct: 233 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFERQKCPRGKHCNFLHV 330
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H D F+ED F E KYG + + + N L+GN+YI+F E+ + + + D+ R
Sbjct: 58 VQIHLDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRCIEDIGKR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 114
++ G+ + EL + C YE G C + C F+H+ ++ L L++
Sbjct: 118 YYSGKRIVVELGNCYRISDGVCTDYEKGLCGKGERCGFIHVAKVTESLMEELFA 171
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V N HL GNVY++++ E++ ++A+ N RW+
Sbjct: 263 QQFLDFYEDVLPEFKN-VGKVVQFKVSCNFEPHLRGNVYVQYQSEQECQEALTLFNGRWY 321
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 322 AGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 360
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ + RW+
Sbjct: 235 QQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWY 293
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 294 AGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E ++ G++ + V N HL GNVY++++ EE+ + A + N RW+
Sbjct: 233 QQFLDFYDDVLPEFKN-VGKVIQFKVSCNWEPHLRGNVYVQYQTEEECQTAFSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 AGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F++DV E ++ G++ + V N HL GNVY++++ EE+ + A + N RW+
Sbjct: 220 QQFLEFYDDVLPEFKN-VGKVIQFKVSCNSEPHLRGNVYVQYQSEEECQAAHSLFNGRWY 278
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A CR +E +C R CNF+H+
Sbjct: 279 AGRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCNFLHV 317
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
MQE + F+ DV E + G++ + V N HL GNVY++F EE ++A N R
Sbjct: 238 MQESFLEFYHDVLPEFK-SVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCKEAFIKFNGR 296
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+ GR ++ E+SPVT ++ A C ++ C + CNF+H+
Sbjct: 297 WYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCNFLHV 337
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F++DV E + G++ + V N HL GNVY++++ EE+ + A++ N RW+
Sbjct: 283 QQFLEFYDDVLPEFRN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSVFNGRWY 341
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 342 AGRQLQCEFCPVTRWQMAICGLFETQQCPRGKHCNFLHV 380
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ + RW+
Sbjct: 235 QQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWY 293
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 294 AGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ + RW+
Sbjct: 221 QQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWY 279
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 280 AGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 318
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F++DV E G++ + V N HL GNVY++++ EE+ + A++ N RW+
Sbjct: 234 QQFLDFYDDVLPEFRS-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 AGRQLRCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ +FF DV E E ++G I + VC N HL GNVY+++ +A K+ N RW+G
Sbjct: 229 HFKDFFFDVLPEME-RFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGRWYG 287
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP 103
GR + E + ++ A C + +C + CNF+H+ P
Sbjct: 288 GRQLSVEFCNIESWKSAICGLHSRKKCPKGSSCNFLHVFP 327
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E + F+ DV E + G++ + VC N HL GNVYI+F ++ ++A+ N R
Sbjct: 237 LHESFLEFYHDVLPEFK-SVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKEALMKFNGR 295
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+ GR + E+SPVT ++ A C ++ +C + CNF+H+
Sbjct: 296 WYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHV 336
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ + A + N RW+
Sbjct: 233 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWY 291
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E SPVT ++ A C + +C R CNF+H+
Sbjct: 292 AGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 330
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+ + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ + A + N RW+
Sbjct: 234 QQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWY 292
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + E SPVT ++ A C + +C R CNF+H+
Sbjct: 293 AGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 331
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ F+EDV E G + + VC N HL GNVYI++ E DAE+ ++ N RW+
Sbjct: 31 HFREFYEDVTPEFR-ALGRLVQFKVCCNYEPHLRGNVYIQYESESDAERCLSAFNGRWYA 89
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR + + S VT ++ A C + +C + CNF+H+
Sbjct: 90 GRQLSCQYSAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
F+ DV E ++ G++ + V N HL GNVY++++ EE+ KA N RW+ R +
Sbjct: 228 FYADVVPEFKNA-GKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFNGRWYASRQL 286
Query: 68 YAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
E SPVT ++ A C +E +C R CNF+H+
Sbjct: 287 QCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 320
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E ++ F++DVF E +K+G +E++ VC N HL GNVY+++ AE A LN R
Sbjct: 277 LYEDFEVFYDDVFPEF-NKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAETAFQSLNGR 335
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMG-ECTRSGFCNFMHL 101
++GG+ + + + A C Y G C R G CNF+H+
Sbjct: 336 FYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNFLHV 377
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H+ F+EDV E E YG+I + C N HL GN+Y++++ E +A +A LN RW+
Sbjct: 236 QHFREFYEDVITELES-YGKISVLRCCCNTETHLRGNLYVEYQTEREATRAWKRLNGRWY 294
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
G+ + E + +R A C M +C + CNF+H
Sbjct: 295 AGKQLRCEFVNLISWRNAICG---MSKCPKGTACNFLH 329
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q D F+ D+F+ C+ ++G +E++ + N D + GNVY+ F+ + A+ A +LNN++
Sbjct: 65 QRAADAFYYDIFLMCQ-RFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNLNNQY 123
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
+ GR V L+P++ A C + C CN++H IS + + + R R
Sbjct: 124 YAGRKVECVLTPISRLSNAICNE---TSCPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE-KAVNDLNNRWFG 63
Y F+ DV +E E ++G+I + C NL DHL G+VY++F R A A N RWF
Sbjct: 266 YHEFYHDVRMELESRWGKISVIRTCRNLADHLRGSVYVEFSRGPSAAWDAAEACNGRWFA 325
Query: 64 GRPVYAELSPV-TDFREACCRQYEMGECTRSGF-CNFMH--LKP--ISRELRRYLY 113
GR + + + +REA C Y G+C + CNF+H L P S +L++ L+
Sbjct: 326 GRKLTCTVVRLGGGWREAICGLYHRGKCPKGDLHCNFLHVFLNPGETSNDLQKTLW 381
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q D F+ D+F+ C+ ++G +E++ + N D + GNVY+ F+ + A+ A LNN++
Sbjct: 65 QRAADAFYYDIFLMCQ-RFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQY 123
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
+ GR V L+P++ A C + C CN++H IS + + + R R
Sbjct: 124 YAGRKVECVLTPISRLSNAICNE---SACPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ +F+ DV E E K+G+I+ + C N HL GN+Y+++ E +A +A+ L RW+
Sbjct: 237 HFRDFYFDVVPELE-KFGKIKTLQYCKNTEAHLRGNLYVEYATEREAARALRGLKGRWYA 295
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E + +R A C M C + CNF+H+
Sbjct: 296 GRQLHCEFVNLKSWRGAIC---GMMRCPKGSACNFLHV 330
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F++DV E G + C N HL GNVY++++ A +A+ N RW+ G
Sbjct: 120 FEKFYDDVIGEFRAA-GTVVMFKCCQNYVPHLRGNVYVQYQDHNGALRALKMFNGRWYAG 178
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
R + ELSPVT+++ + C ++ C R CNF+H+
Sbjct: 179 RQLSVELSPVTNWKSSICGLFDKRLCPRGKACNFLHV 215
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
F+ D E G + + VC N HL GNVY+++ REED +A+ + R++ G+ +
Sbjct: 197 FYNDTLPEFR-TLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRKFHGRFYAGKQL 255
Query: 68 YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP-ISRELR----RYLYSRRKRSSRR 122
E++PVT ++ A C + C + CNF+H+ P RE R + R ++ SRR
Sbjct: 256 TCEMTPVTSWKSAICGLFSRKRCPKGKHCNFLHVFPNPGREFRDADEDHHLGRGQQDSRR 315
Query: 123 SSR 125
S R
Sbjct: 316 SWR 318
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E + F+ DV E + G++ + V N HL GNVY++F EE ++A N RW+
Sbjct: 236 ESFLEFYHDVLPEFK-SVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCKEAFIKFNGRWY 294
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
GR ++ E+ PVT ++ A C ++ +C + CNF+H+
Sbjct: 295 AGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCNFLHV 333
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ + + +F+ED E ++ G + + V N HL GNVY+++ EE ++A N R
Sbjct: 245 LHQQFLDFYEDALPEFKN-AGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGR 303
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+ GR + E SPVT ++ A C ++ +C + CNF+H+
Sbjct: 304 WYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 344
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q + D FF D+F+ C ++G IE++ +C N D L GN Y+ + + + A A+ L+ ++
Sbjct: 70 QRYIDAFFLDMFLMCR-RFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMALTALDGQY 128
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 118
+ GR V+ L V + A C+ GEC+R C F+H S L + + R +
Sbjct: 129 YAGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHALEPSFALYQEVIPRINK 185
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
M + + F++DVF E E K+GE+ + V N HL GN+Y+++ EE A+ N R
Sbjct: 169 MLKDFKEFYQDVFPEFE-KFGEVVQFKVSCNYESHLRGNLYVQYSTEEACAAAIKQFNGR 227
Query: 61 WFGGRPVYAELSPVTDFREACCRQY--EMGECTRSGFCNFMHL 101
++ G+ + E PV ++ A C ++ + +C + CNF+H+
Sbjct: 228 YYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKHCNFLHV 270
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E KYGE+ VC N HL GNVY+ +R E A A +N R+F G
Sbjct: 304 YEEFYEDVHTEFL-KYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAG 362
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E ++ ++ A C +Y + C+R CNF+H
Sbjct: 363 KQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H D F+ED F E KYG + + + N+ L+GN+YI+F E A + + ++ R
Sbjct: 58 VQIHLDLFYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCMEEIGKR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL-KPISRELRRYLYSRRKRS 119
++ G+ + EL + C +E C + C F+H+ K + + L S+R
Sbjct: 118 YYCGKRIVVELGNCYRISDGVCTDHEKDLCAKGERCGFIHVAKATASLVEELLASQRLLY 177
Query: 120 SRRSSRSRSR 129
++ S ++R
Sbjct: 178 TQIGSMGKNR 187
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E KYGE+ VC N HL GNVY+ +R E A A +N R+F G
Sbjct: 304 YEEFYEDVHTEFL-KYGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAG 362
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E ++ ++ A C +Y + C+R CNF+H
Sbjct: 363 KQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ F+EDV E E +G I+ + C N HL GNVY+++ E +A +A +L RW+
Sbjct: 239 HFYEFYEDVITELES-FGRIKTLKCCCNKEIHLRGNVYVEYYTEREAARAWRNLKGRWYA 297
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 100
G+ + E T +R A C + +C + S FCNF+H
Sbjct: 298 GKQLNCEFVNFTSWRGAVC---GINKCPKGSKFCNFLH 332
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A N +N R
Sbjct: 266 VEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYNSMNGR 324
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 325 YFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIH 367
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H+ FFEDV E E +G I+ + C N+ HL GN+Y+++ E +A +A +L RW+
Sbjct: 230 QHFYEFFEDVITELES-FGRIKVIKCCRNMEVHLRGNLYVEYYTEREAARAWRNLKGRWY 288
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 100
GG+ ++ E + + A C + +C + + +CNF+H
Sbjct: 289 GGKRLHCEFVNLISWGGAIC---GIAQCPKGTKYCNFLH 324
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW+
Sbjct: 238 QHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWY 296
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
GR + E + +R A C M +C + CNF+H
Sbjct: 297 AGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLH 331
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L R
Sbjct: 236 TRQHFREFYKDVVPELES-FGRIKTLKYCCNTEIHLRGNLYVEYYTEREAARALRRLKGR 294
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+ GR + E + +R A C M +C + CNF+H
Sbjct: 295 WYAGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLHT 332
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
+H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW+
Sbjct: 238 QHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWY 296
Query: 63 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
GR + E + +R A C M +C + CNF+H
Sbjct: 297 AGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLH 331
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E KYGEI VC N HL GNVY++++ + A A +N R+F G
Sbjct: 279 YEEFYEDVHTEFL-KYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSINGRYFAG 337
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E VT ++ A C +Y + C+R CNF+H
Sbjct: 338 KQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIH 376
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q D+FF DV+ E + ++G ++++ + NL +HL GNVY++F ++A L R
Sbjct: 87 LQSMIDSFFLDVYAEFK-QFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQGR 145
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 120
++ GR V + L C + G+C C ++H ISR++ + R S+
Sbjct: 146 FYAGRKVTSSLIFFDKLSSLICVSKQSGKCFHGQCCPYVHPLQISRDVFNQAFPRILLST 205
Query: 121 RRSSRSRSRD 130
+ + + D
Sbjct: 206 PSALLTNTPD 215
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A N +N R
Sbjct: 7 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYNSMNGR 65
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E +T ++ A C +Y C+ CNF+H
Sbjct: 66 YFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVACNFIH 108
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 276 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 334
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 335 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 377
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 180 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 238
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 239 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 281
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 223 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 281
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 282 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 324
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++H+ F++DV E E +G+I+ + C N HL GN+Y+++ E +A +A+ L R
Sbjct: 245 TRQHFREFYKDVVPELES-FGKIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGR 303
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+ GR + E + +R A C M +C + CNF+H
Sbjct: 304 WYAGRQLNCEFVNLRSWRSAVCG---MSKCPKGRACNFLHT 341
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+ FF D+ E + K+G++ E+ VC+N HL GN YI++ A A L+ RW+GG
Sbjct: 225 FKEFFFDILPEFQ-KFGQVVEIKVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTRWYGG 283
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
+ + + + + A C G C + CNF+H+
Sbjct: 284 KQLSLQFCRLLSWSSAICGLQVTGRCPKGRACNFLHV 320
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L R
Sbjct: 236 TRQHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGR 294
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
W+ GR + E + +R A C M +C + CNF+H
Sbjct: 295 WYAGRQLNCEFVNLRSWRSAVC---GMSKCPKGRACNFLH 331
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E KYGEI VC N HL GNVY+ ++ + A A + +N R+F G
Sbjct: 27 YEEFYEDVHTEFL-KYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHSINGRYFAG 85
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E +T ++ A C ++ + C+ CNF+H
Sbjct: 86 KQVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIH 124
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+F++DV E GE+ + VC N HL GNVY+++ E++ KA++ N R++ G+
Sbjct: 100 SFYDDVLGEFR-ALGEVIQFKVCCNWEPHLRGNVYVQYNSEDECSKAISMFNGRYYAGKQ 158
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
+ P+T ++ A C + C + CNF+H+
Sbjct: 159 LTCLYCPITKWKSAICGLFAKKRCPKGKHCNFLHV 193
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ +FF DV E E ++G I + VC N HL GNVY+++ +A K+ N RW+G
Sbjct: 229 HFKDFFFDVLPEME-RFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGRWYG 287
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP 103
GR + E + ++ A C CNF+H+ P
Sbjct: 288 GRQLSVEFCNIESWKSAIC----------GSSCNFLHVFP 317
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 230 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 289
Query: 86 EMGECTRSG-FCNFMHLKPISRE 107
G C + CN++HL P +R+
Sbjct: 290 VKGACAQGNENCNYLHLNPYNRK 312
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 227 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 286
Query: 86 EMGECTRSG-FCNFMHLKPISRE 107
G C + CN++HL P +R+
Sbjct: 287 VKGACAQGNENCNYLHLNPYNRK 309
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 315 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 373
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 374 YFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 416
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 200 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 259
Query: 86 EMGECTRSG-FCNFMHLKPISRE 107
G C + CN++HL P +R+
Sbjct: 260 VKGACAQGNENCNYLHLNPYNRK 282
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 280 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 338
Query: 61 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 339 YFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 381
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 190 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 249
Query: 86 EMGECTRSG-FCNFMHLKPISRE 107
G C + CN++HL P +R+
Sbjct: 250 VKGACAQGNENCNYLHLNPYNRK 272
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 38/56 (67%)
Query: 57 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 112
LN R++ GR + AELSPVTDFREA CRQ E G C+R CNF+ L SR L R L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 26 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 85
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 187 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 246
Query: 86 EMGECTRSG-FCNFMHLKPISRE 107
G C + CN++HL P +R+
Sbjct: 247 VKGACAQGNENCNYLHLNPYNRK 269
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDV E K+GEI VC N HL GNVY++++ + A A N +N R+F G
Sbjct: 15 FEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAG 73
Query: 65 RPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMH 100
+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 74 KQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 112
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+F+EDV E ++ G + ++ V NL HL GN+Y+ ++ E + + A++ N RW+ G
Sbjct: 236 DFYEDVLPEFKN-VGRVIQLRVSCNLKPHLRGNIYVHYQLEAEXQAALSLFNKRWYTGPH 294
Query: 67 VYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPIS 105
+ E PV ++ A C +E + CNF+ + PIS
Sbjct: 295 LQCEFCPVIRWKMAICSSFEKQQHPTGKHCNFLPVFRNPIS 335
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E Y+ FF DV E E K G++ + C N HL GNVY++F+ EE +A N RW+
Sbjct: 13 ERYEEFFNDVLPEFE-KAGKVVQFKACCNYEPHLRGNVYVQFKDEESCARAFAAFNGRWY 71
Query: 63 GGRPVYAELSPVTDFREACCRQY 85
+ + E SPVT ++ A C ++
Sbjct: 72 AQKQLSCEFSPVTRWKSAICDRF 94
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDV E K+GEI VC N HL GNVY++++ + A A N +N R+F G
Sbjct: 236 FEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGRYFAG 294
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 295 KQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIH 333
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y FF DV E E +G I V N HL GNVY+++ + DA KA +N R++
Sbjct: 253 YTEFFMDVIEEFES-FGPISGFFVTRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYAS 311
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISR 106
+ + E + A C +E C + CN++HL P+++
Sbjct: 312 KQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNYLHLLVNPVAK 355
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y FF DV E E +G I V N HL GNVY+++ + DA KA +N R++
Sbjct: 38 YTEFFMDVIEEFES-FGPISGFFVTRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYAS 96
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISR 106
+ + E + A C +E C + CN++HL P+++
Sbjct: 97 KQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNYLHLLVNPVAK 140
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+Q H D F+ED F E +YG I + + N L+GN+YI+F E+ A + V ++ R
Sbjct: 58 IQIHLDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRCVEEIGKR 117
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 113
++ GR + AEL + C E +C + C F+H +S +L L+
Sbjct: 118 YYSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKCGFIHSARVSTDLAEELF 170
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDV E K+GE+ VC N H GNVY++++ + A A N +N R+F G
Sbjct: 247 FEEFYEDVHTEFL-KFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNSVNGRYFAG 305
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 306 KQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIH 344
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
++ F+EDV E K+GEI VC N HL GNVY++++ + A A N +N R+F G
Sbjct: 13 FEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAG 71
Query: 65 RPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMH 100
+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 72 KQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 110
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC++KYG++ + V N +G +++KF + AEKA+ L+ RWFGGR + A
Sbjct: 530 QDVKEECDEKYGKVVHIAVVPNE----LGQIFVKFENADFAEKAITGLHQRWFGGRTIKA 585
Query: 70 ELSPVTDF 77
+ P TD+
Sbjct: 586 SILPETDY 593
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E K+GEI VC N HL GNVY+ ++ + A A + +N ++ G
Sbjct: 288 YEEFYEDVQTEFL-KFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSINGLYYAG 346
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E VT ++ A C +Y C+ CNF+H
Sbjct: 347 KQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 385
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++ Y+ FF D+ E E +G + + VC N HL G+VYI++ +A A +N R
Sbjct: 226 LKNSYNEFFRDIIQEFE-MFGTVRHIFVCRNSVAHLRGSVYIEYESMRNAAAAYLRMNGR 284
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
++ + ++ E + A C EM C + CNF+H+
Sbjct: 285 FYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCNFLHI 325
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F+EDV E K+GEI VC N HL GNVY+ ++ + A A + +N ++ G
Sbjct: 264 YEEFYEDVQTEFL-KFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSINGLYYAG 322
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ V E VT ++ A C +Y C+ CNF+H
Sbjct: 323 KQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 361
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ E + F+ DV E + G++ + V N HL GNVY++F EE ++A+ N R
Sbjct: 221 LYESFLEFYHDVLPEFKS-VGKVLQFKVSCNHEPHLRGNVYVQFGSEEQCKEALIKFNGR 279
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRS 93
W+ GR ++ E+ PVT ++ A C Q + R+
Sbjct: 280 WYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRA 312
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F++DV E KYGEI VC N HL GN+Y+ ++ + A A N N R++ G
Sbjct: 279 YEEFYDDVHTEFL-KYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFYAG 337
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ + E VT ++ A C ++ C+ CNF+H
Sbjct: 338 KQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
Y+ F++DV E KYGEI VC N HL GN+Y+ ++ + A A N N R++ G
Sbjct: 279 YEEFYDDVHTEFL-KYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFYAG 337
Query: 65 RPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 100
+ + E VT ++ A C ++ C+ CNF+H
Sbjct: 338 KQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ +DV ECE+KYG++ ++ V G +YIKF E AEKA+ LN RWFGG+
Sbjct: 330 DLADDVRGECEEKYGKVLDLKV----EKESEGEIYIKFESVESAEKAIKGLNGRWFGGKQ 385
Query: 67 VYAELSPVTD 76
V A SP+ D
Sbjct: 386 VTA--SPIPD 393
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 1 MQEH-----YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 55
M EH YD FF D E E K+G+I N +HL G+V++++ E+ A +A
Sbjct: 226 MTEHDLRSDYDEFFNDAVTELE-KFGKIVNFRALRNTLEHLSGHVFVEYANEKCALRAFI 284
Query: 56 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLY 113
+L R++ R + E S + +R A C +C + C ++HL P + + Y
Sbjct: 285 NLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRNPNNLFNKDLEY 344
Query: 114 SRRKRSSRRSSRS 126
+ RS+R S +S
Sbjct: 345 TNTPRSARNSGKS 357
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
M H+ F+ D+ E + K+G++ + VC N HL GNVYI+++ ++DA A + R
Sbjct: 230 MYSHFKEFYTDIVPEFK-KFGDLTMVKVCCNSEPHLRGNVYIEYKHKKDALLAYKEFQGR 288
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
W+G D+ A C + C + CNF+H+
Sbjct: 289 WYG------------DWGGAVCGDFARRRCLKGKSCNFLHV 317
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 1 MQEH-----YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 55
M EH YD FF D E E K+G+I N +HL G+V++++ E+ A +A
Sbjct: 226 MTEHDLRSDYDEFFNDAVTELE-KFGKIVNFRALRNTLEHLSGHVFVEYANEKCALRAFI 284
Query: 56 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLY 113
+L R++ R + E S + +R A C +C + C ++HL P + + Y
Sbjct: 285 NLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRNPNNLFNKDLEY 344
Query: 114 SRRKRSSRRSSRS 126
+ RS+R S +S
Sbjct: 345 TNTPRSARNSGKS 357
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
EDV ECE+KYG+++E+ V D + G + +KF E AE A+N LN RWFGGR V
Sbjct: 385 LAEDVKTECENKYGKVQEIGV-DKESEE--GEIVVKFYTIESAEDAINGLNGRWFGGRQV 441
Query: 68 YA 69
A
Sbjct: 442 KA 443
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 280 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 338
Query: 61 WFGGRPVYAELSPVTDFREACCRQY 85
+F G+ + E VT ++ A C +
Sbjct: 339 YFAGKQITCEFVAVTRWKAAICDMF 363
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV ECEDKYG+++ + V G +Y+KF + A+ A+ LN RWFGGR
Sbjct: 513 DLAEDVKGECEDKYGQVDAIKVEQET----QGKIYVKFNSIDSAKNAIQGLNGRWFGGRQ 568
Query: 67 VYA 69
V A
Sbjct: 569 VSA 571
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+ + Y+ F++DV E ++GE+ VC N HL GNVY+ + +E A A N +N R
Sbjct: 60 VAQEYEEFYDDVHSE-FIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNGR 118
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 100
++ + V ACC + C+ CNFMH
Sbjct: 119 FYAKKQVVLPRGWKICDILACCFWSTVQTCSHGSACNFMH 158
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV ECEDKYG+++ + V G +Y+KF + A+ A+ LN RWFGGR
Sbjct: 513 DLAEDVKGECEDKYGQVDAIKVEQET----QGEIYVKFNSIDSAKNAIQGLNGRWFGGRQ 568
Query: 67 VYA 69
V A
Sbjct: 569 VSA 571
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF D VE K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFNDA-VEELGKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKRSSRR 122
+ + E S + +R A C +C + C ++HL P + Y+ RS RR
Sbjct: 295 KRLNVEFSNLRTWRGAVCGLSLTRKCPKGNGCGYLHLFGNPNNLYNTELEYTSGPRSERR 354
Query: 123 SSRS 126
SS++
Sbjct: 355 SSQT 358
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 39/104 (37%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
QEH++ F+E+VF+E + YG +
Sbjct: 76 QEHFEAFYEEVFLELAN-YG--------------------------------------TF 96
Query: 62 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 105
+ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 97 YAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHVP 140
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF DV E K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFNDVVEELR-KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKRSSRR 122
+ + E S + +R A C +C + C ++HL P + Y+ RS RR
Sbjct: 295 KRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHLFGNPNNLFNTELEYTSGPRSERR 354
Query: 123 SSRS 126
SS++
Sbjct: 355 SSQT 358
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV VECE+KYG++E + V G +Y+KF E A++A+ LN RWFGGR V
Sbjct: 379 LADDVKVECENKYGKVEAIKVER----ETQGEIYLKFDSIESAKQAIQGLNGRWFGGRQV 434
Query: 68 YA 69
A
Sbjct: 435 SA 436
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ + L+N ++ G
Sbjct: 62 YDHCFEDIFLRLA-QLGPMQDFLVAENT-NHLAGTVYAQYTSQVAAQDVASKLSNTYYAG 119
Query: 65 RPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 100
PV AE+ V + CR +Y G +C C+F+H
Sbjct: 120 FPVKAEVIGVESIHKTLCRDEYASGKSGNKCAHGLSCSFVH 160
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ + L+N ++ G
Sbjct: 64 YDHCFEDIFLRLA-QLGPMQDFLVAENT-NHLAGTVYAQYASQVAAQDVASKLSNTYYAG 121
Query: 65 RPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 100
PV AE+ V + CR +Y G +C C+F+H
Sbjct: 122 FPVKAEVIGVESIHKTLCRDEYASGKSGSKCAHGLSCSFVH 162
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ A + L++ ++ G
Sbjct: 62 YDHCFEDIFLRLV-QLGPLQDFLVAENT-NHLAGTVYAQYASQVAAQDAASKLSDTYYAG 119
Query: 65 RPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 100
PV AE+ V + + CR +Y G +C C+F+H
Sbjct: 120 FPVKAEVIGVENVHKMLCRDEYASGKPGSKCAHGLSCSFVH 160
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV ECEDKYG++E + V + G +Y+KF E A+ A+ LN RWFGG
Sbjct: 553 DLAEDVKYECEDKYGKVEFIKVEKDSQ----GEIYVKFDSVESAKNAIQGLNGRWFGGNQ 608
Query: 67 VYA 69
V A
Sbjct: 609 VSA 611
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 464 DDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 519
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 520 Q--PVVD 524
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 1 MQEHYDNFF----EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 56
+E DN+ +DV ECE+KYG++ ++V +N G+VYIKF E+A+
Sbjct: 407 QEESGDNWIRELEDDVKAECENKYGKVLHIHVEENS----PGDVYIKFDNVVAGERAIQG 462
Query: 57 LNNRWFGGRPVYA 69
LN RWFGGR + A
Sbjct: 463 LNGRWFGGRTISA 475
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 510 DDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 565
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 566 Q--PVVD 570
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + ++V N G++Y+KF R E A+ LN R+FGGR + A
Sbjct: 489 DDVRAECEEKYGHVVHISVDPNT----QGDIYLKFERVSGGENAIKGLNGRYFGGRQISA 544
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 545 Q--PVVD 549
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 511 DDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 566
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 567 Q--PVVD 571
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 512 DDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 568 Q--PVVD 572
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 512 DDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 568 Q--PVVD 572
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 50
++ F+E+VF+E + YGEI+++ +CDN+GDH+ GNVY+K+ +E A
Sbjct: 79 FEEFYEEVFLELAN-YGEIDDLIICDNIGDHMRGNVYVKYIKESSA 123
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 495 DDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 550
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 551 Q--PVVD 555
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 493 DDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 549 Q--PVVD 553
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG++ ++V +N G+VYIKF E+A+ LN RWFGGR + A
Sbjct: 419 DDVKAECENKYGKVLHIHVEENS----PGDVYIKFDNVVAGERAIQGLNGRWFGGRTISA 474
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 493 DDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 549 Q--PVVD 553
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G +YIKF + + EKA+ LN R+FGGR + A
Sbjct: 458 DDVKTECENKYGHVVHIALDPNS----QGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISA 513
Query: 70 ELSPVTD 76
SPV D
Sbjct: 514 --SPVVD 518
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 497 DDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 552
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 553 Q--PVVD 557
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECEDKYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 498 DDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 553
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 554 Q--PVVD 558
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 10 EDVFVECEDKYGEIEEMNV-CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 68
+DV ECE+KYG + + + +++G G +YI F A+KA+ LNNRWFGGR +
Sbjct: 625 DDVKGECEEKYGPVLAIAIEKESMG----GEIYITFDSVASAQKAIAGLNNRWFGGRQIT 680
Query: 69 AELSP 73
A P
Sbjct: 681 AAFIP 685
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + + G++YI F A+KA+ LNNRWFGGR + A
Sbjct: 635 DDVKGECEEKYGPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 691
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
EDV EC++KYG++E + V G +Y+KF + A++AV LN RWFGGR +
Sbjct: 291 LAEDVKGECQEKYGKVEAIKVEK----ETQGEIYVKFATIDSAKEAVQALNGRWFGGRQI 346
Query: 68 YA 69
A
Sbjct: 347 SA 348
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + + G++YI F A+KA+ LNNRWFGGR + A
Sbjct: 635 DDVKGECEEKYGPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 691
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE KYG + ++V N G G+VYIKF + E A+ LN R+FGGR + A
Sbjct: 473 DDVKAECEAKYGHVVHISVDPNSG----GDVYIKFEKIVGGENAIKGLNGRFFGGRQISA 528
Query: 70 ELSPVTD 76
PV D
Sbjct: 529 --LPVVD 533
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 519 DDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 575 Q--PVVD 579
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 487 DDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 542
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 543 Q--PVVD 547
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF+D E E K+G+I N HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFKDATGELE-KFGKIVNFRTVCNTLPHLRGHVFVEYAHERFALRAFINLQGRYYAA 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
R + E S + +R A C +C + C ++HL
Sbjct: 295 RRLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCGYLHL 331
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 521 DDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 576
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 577 Q--PVVD 581
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 516 DDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 571
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 572 Q--PVVD 576
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 519 DDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 575 Q--PVVD 579
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
H+ F+EDV ++ + +G+I+ + C N HL GN+Y+++ E +A +A L +
Sbjct: 237 HFRKFYEDV-IKILELFGKIKTLKCCCNTELHLRGNLYVEYYTEREAARAWRHLKGYTYA 295
Query: 64 GRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 100
+ + E +T +R+A C M +C + S CNF+H
Sbjct: 296 NKQLNCEFVNLTSWRKAIC---GMTKCPKGSKACNFLH 330
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 39/134 (29%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCD---------------------------------- 30
Y+ F+EDV E KYGE+ VC
Sbjct: 348 YEEFYEDVHTEFL-KYGELVNFKVCRFSSAPSPPFPSFPLPPLFFLLSIISHRFILYQIR 406
Query: 31 -NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY---E 86
N HL GNVY+ +R E A A +N R+F G+ V E ++ ++ A C +Y
Sbjct: 407 INGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSR 466
Query: 87 MGECTRSGFCNFMH 100
+ C+R CNF+H
Sbjct: 467 LKTCSRGSACNFIH 480
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 11 DVFVECEDKYGEIEEMNV-CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
D+ +ECE KYG +E + V D++G+ V++KF R AEKA++ LN RWFGG+ + A
Sbjct: 389 DIKIECE-KYGRVEHIKVNSDSMGE-----VFLKFDRVGSAEKAISALNGRWFGGKQITA 442
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 523 DDVRAECEEKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 578
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 579 Q--PVVD 583
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 527 DDVRAECEEKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 582
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 583 Q--PVVD 587
>gi|331242737|ref|XP_003334014.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 88
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + + G++YI F A+KA+ LNNRWFGGR + A
Sbjct: 18 DDVKGECEEKYGPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 74
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 527 DDVRAECEEKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 582
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 583 Q--PVVD 587
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 489 DDVRAECEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 544
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 545 Q--PVVD 549
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV ECE KYG++ +++ + D G VY+KF R + E A LN RWFGGR + A
Sbjct: 470 EDVKGECEAKYGKVVHIDLALDNND---GEVYVKFDRVQGGENAFKGLNGRWFGGRMLTA 526
Query: 70 E 70
+
Sbjct: 527 Q 527
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 493 DDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 549 Q--PVVD 553
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 489 DDVRAECEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 544
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 545 Q--PVVD 549
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 479 DDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 534
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 535 Q--PVVD 539
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV ECEDKYG ++ + L G +Y+KF+ E A KA+ LN R+FGG+P+
Sbjct: 571 LTDDVKQECEDKYGLVDFIK----LEPDSQGEMYLKFKSIEAASKAIEGLNGRYFGGQPI 626
Query: 68 YA 69
A
Sbjct: 627 QA 628
>gi|58430724|dbj|BAD89156.1| hypothetical protein [Hodotermopsis sjoestedti]
Length = 95
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 86 EMGECTRSGFCNFMHLKPISRE 107
EMGECTRSGFCNFMHLKPISRE
Sbjct: 1 EMGECTRSGFCNFMHLKPISRE 22
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
D +DV EC++KYG++ + + + D G +YIKF R + E A+ LN RWFGG
Sbjct: 529 DELKDDVKSECDEKYGKVVHIGLALDNND---GEIYIKFDRVQGGENAIRGLNGRWFGGN 585
Query: 66 PVYAE 70
+ A+
Sbjct: 586 MITAQ 590
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV EC +KYG++ + V G +Y+KF E A+KAV LN RWFGG+ V
Sbjct: 111 LADDVKGECGEKYGKVTAIKVEK----ETQGEIYVKFDSIESAKKAVQGLNGRWFGGKQV 166
Query: 68 YA 69
A
Sbjct: 167 TA 168
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV ECE+KYG + V +L G++Y+KF R + E A+ LN R+FGG+ + A
Sbjct: 483 EDVRSECEEKYGHV----VHISLDVSSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 538
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 539 Q--PVVD 543
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 2 QEHYDNFF----EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
QE NF EDV EC KYG++ + C + D G VY++F E A KA+ L
Sbjct: 513 QETEPNFHLDIQEDVTEECS-KYGKVLQ---CHVVRDSPSGLVYLRFESSEGAAKAIQAL 568
Query: 58 NNRWFGGRPVYAELSPVTDFREAC 81
N RWF G+ + AE F C
Sbjct: 569 NGRWFAGKVISAEFIDENTFAAGC 592
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF D E E K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFRDAVEELE-KFGTIVNFRTVRNTLEHLRGHVFVEYTSERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKRSSRR 122
+ + E S + +R A C C ++HL P ++ Y+ RS RR
Sbjct: 295 KRLNVEFSNLRTWRGAVC----------GNGCGYLHLFGNPNNQFNTELEYTTGPRSERR 344
Query: 123 SSRS 126
SS++
Sbjct: 345 SSQT 348
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV E E+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 491 EDVRQEAEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIKGLNGRYFGGRMITA 546
Query: 70 ELSPVTD--FREACCRQYEMG 88
+PV D + + C +G
Sbjct: 547 --APVVDAFYSKQCTNPNRLG 565
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV EC+ KYG ++ + V + G +Y++F + A+ A+N LN RWFGG+
Sbjct: 394 DLAEDVKTECQAKYGRVQHIKVEKDS----EGEIYVQFDTVDAAKAAINGLNGRWFGGKQ 449
Query: 67 VYA 69
+ A
Sbjct: 450 ISA 452
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGG+ + A
Sbjct: 495 DDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLNGRFFGGKQITA 550
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 551 Q--PVVD 555
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG++ +++ + D G VY+KF R + E A LN RWF GR + A
Sbjct: 548 DDVKSECEEKYGKVVHIDLALDNND---GEVYVKFDRVQGGENAFKGLNGRWFAGRMITA 604
Query: 70 E 70
+
Sbjct: 605 Q 605
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV ECE KYG + V +L G++Y+KF R + E A+ LN R+FGG+ + A
Sbjct: 489 EDVRSECEKKYGHV----VHISLDASSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 544
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 545 Q--PVVD 549
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV ECE KYG++ + V + G +Y+KF + A+KA+ LN RWFGGR V
Sbjct: 494 LAQDVKGECESKYGKVLAIKVEKDS----QGEIYVKFDSIDYAQKAIQGLNGRWFGGRQV 549
Query: 68 YA 69
A
Sbjct: 550 SA 551
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 6 DNFFEDVFVECEDKYGEI------EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
D+ +DV EC KYGE+ E D+ +H+V ++++F+ + AEK V LN
Sbjct: 556 DDLQQDVTDECS-KYGEVVKVVIYTEQQGEDDNAEHIV-KIFVEFQTSKQAEKTVESLNG 613
Query: 60 RWFGGRPVYAELSPVTDFR 78
R+FGGR V AEL T ++
Sbjct: 614 RYFGGRAVKAELYDQTAYQ 632
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV ECE KYG++ + V + G +Y+KF + A+KA+ LN RWFGGR V
Sbjct: 494 LAQDVKGECESKYGKVLAIKVEKDS----QGEIYVKFDSIDYAQKAIQGLNGRWFGGRQV 549
Query: 68 YA 69
A
Sbjct: 550 SA 551
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV ECEDKYG++E + V G +Y+KF E A+ A+ L+ RWFGG
Sbjct: 529 DLAEDVKGECEDKYGKVEFIKVERES----QGEIYVKFDSIESAKNAIQGLHGRWFGGNQ 584
Query: 67 VYA 69
V A
Sbjct: 585 VSA 587
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ YD FF D E E K+G+I N D+L G+V++++ +E A +A +L R
Sbjct: 228 LRDSYDEFFHDAVAELE-KFGKIVNFRALRNTLDYLRGHVFVEYAQERHALRAFINLQGR 286
Query: 61 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF-CNFMHL 101
++ R + E S + +R A C G+ C ++HL
Sbjct: 287 YYASRQLNVEFSNLKGWRGAVC-----------GYSCAYLHL 317
>gi|356576634|ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 500
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K G ++ + +C+N H G V ++F+ +DA+K + +N RWFGGR ++A
Sbjct: 413 EDVKEECT-KLGPVDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHA 468
>gi|388517133|gb|AFK46628.1| unknown [Lotus japonicus]
Length = 162
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K G I+ + VC+N H G V ++F+ +DA+ ++ +N RWFGGR ++A
Sbjct: 75 EDVKEECT-KLGPIDSVKVCEN---HPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQIHA 130
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE KYG++ + V G +Y+KF + A KAV LN RWFGG+ V A
Sbjct: 342 DDVKGECESKYGKVSAIKV----EKETQGEIYVKFDAVDAARKAVQGLNGRWFGGKQVSA 397
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE-KAVNDLNNRWFG 63
Y F+ DV E E ++G + + C N +HL G VY++F A A RWF
Sbjct: 539 YVEFYHDVRDELEARWGRVAALRTCRNRTEHLRGTVYVEFALGSGATWDAAEACAGRWFA 598
Query: 64 GRPVYAELSPV-TDFREACCRQYEMGECTR-SGFCNFMHL 101
GR + + + +REA C + C + CNF+H+
Sbjct: 599 GRQLTCMVVRLGGGWREAICGLHHRRRCPKGDSKCNFLHV 638
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF D E K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFNDAVEELR-KFGTIVNFRTVRNTVEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKRSSRR 122
+ + E S + +R A C C ++HL P + Y+ RS RR
Sbjct: 295 KKLNVEFSNLKTWRGAVC----------GNGCGYLHLFGNPNNLYNTELEYTTGPRSQRR 344
Query: 123 SSRS 126
SS++
Sbjct: 345 SSQT 348
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E EDKYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 483 DDVRQEAEDKYGRVVHISVDPNSK----GDIYLKFEKVQGGENAIRGLNGRYFGGRMIDA 538
Query: 70 ELSPVTD 76
SPV D
Sbjct: 539 --SPVVD 543
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 519 DDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 575 Q--PVVD 579
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 502 DDVRAEAEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIQGLNGRYFGGRMISA 557
Query: 70 ELSPVTD 76
+PV D
Sbjct: 558 --TPVVD 562
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV VECE+KYG + + V G +Y+KF + A+KA+ LN R+FGGR V A
Sbjct: 366 DDVKVECENKYGMVNFIKV----DKESQGEIYVKFDTVDSAKKAIEGLNGRYFGGRQVTA 421
Query: 70 ELSP 73
P
Sbjct: 422 TFIP 425
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 522 DDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 577
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 578 Q--PVVD 582
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
+D FFED E E K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 FDEFFEDAIKELE-KFGSIVNFRAVRNTLEHLRGHVFVEYGHERSALRAFINLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACC 82
R + E S + +R A C
Sbjct: 295 RRLNVEFSNLKTWRGAVC 312
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV ECE KYG + + V G +Y+KF + A+ A+ LN RWFGGR
Sbjct: 554 DLAEDVKGECESKYGRVLAIKVEK----ESQGEIYVKFETVDAAKNAIEGLNGRWFGGRQ 609
Query: 67 VYA 69
+ A
Sbjct: 610 ITA 612
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 52 KAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
KA N RW+ R + E SPVT ++ A C +E +C R CNF+H+
Sbjct: 2 KAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 51
>gi|356535254|ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 503
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K G ++ + +C+N H G V ++F+ +DA+K + +N RWFGGR ++A
Sbjct: 416 EDVKEECT-KLGPLDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHA 471
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 509 DDVRAECEEKYGHVVHIALDPNTQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 564
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 565 Q--PVVD 569
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 514 DDVRAEAEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIKGLNGRYFGGRMISA 569
Query: 70 ELSPVTD 76
+PV D
Sbjct: 570 --TPVVD 574
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV VEC++KYG++ + + + D G +YIKF R++ E A+ LN R +GGR + A
Sbjct: 560 EDVKVECDEKYGQVVHIGLALDNND---GEIYIKFDRKQGGENAIRGLNGRMYGGRMITA 616
Query: 70 E 70
+
Sbjct: 617 Q 617
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
+++ ++ F+EDV E K+GE+ VC N HL GNVY+ ++ E DA A L+ R
Sbjct: 61 IEQKFEEFYEDVHSEFL-KFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVAACLALSGR 119
Query: 61 WFGGRPVYAELS 72
++ + V A S
Sbjct: 120 FYASKQVLARYS 131
>gi|357164467|ref|XP_003580063.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 2
[Brachypodium distachyon]
Length = 477
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K+G ++ + VC+N H G V +KF+ +D K + LN RWFGG+ ++A
Sbjct: 388 EDVRQECM-KFGPVDNIKVCEN---HPQGVVLVKFKDRKDGIKCIEALNERWFGGKQIHA 443
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 49.3 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 520 DDVRAECEEKYGHVVHIALDPNAQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 575
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 576 Q--PVVD 580
>gi|242082602|ref|XP_002441726.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
gi|241942419|gb|EES15564.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
Length = 479
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G + +KF+ +D K + +N RWFGGR ++A
Sbjct: 392 DVREECT-KFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEKMNGRWFGGRQIHA 446
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF D E K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFNDAVEELR-KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKRSSRR 122
+ + E S + +R A C C ++HL P + Y+ RS RR
Sbjct: 295 KRLNVEFSNLRTWRGAVC----------GNGCGYLHLFGNPNNLYNTELEYTSGPRSERR 344
Query: 123 SSRS 126
SS++
Sbjct: 345 SSQT 348
>gi|357164465|ref|XP_003580062.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1
[Brachypodium distachyon]
Length = 489
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K+G ++ + VC+N H G V +KF+ +D K + LN RWFGG+ ++A
Sbjct: 400 EDVRQECM-KFGPVDNIKVCEN---HPQGVVLVKFKDRKDGIKCIEALNERWFGGKQIHA 455
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 522 DDVRAECEEKYGHVVHIALDPNAQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 577
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 578 Q--PVVD 582
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV EC KYG + ++V + G VY+ F + + KA+ LN R+FGG+P
Sbjct: 607 DLAEDVKDECHAKYGAVTSIHVEKDS----AGEVYVTFANLDGSRKALEGLNGRFFGGKP 662
Query: 67 VYAELSP 73
+ A+ P
Sbjct: 663 ISAQYIP 669
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 89 ECTRSGFCNFMHLKPISRELRRYLYS 114
ECTR GFCNFMHLKPISREL R LY+
Sbjct: 1 ECTRGGFCNFMHLKPISRELCRKLYN 26
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV EC+ KYG + ++V G +Y+ F + + KA++ LN R+FGG+P
Sbjct: 588 DLAEDVKEECQAKYGRVTSIHVEKES----AGEIYVTFADLDASRKALDGLNGRFFGGKP 643
Query: 67 VYAELSP 73
+ A+ P
Sbjct: 644 ISAQYIP 650
>gi|194916573|ref|XP_001983016.1| GG11065 [Drosophila erecta]
gi|190647619|gb|EDV45013.1| GG11065 [Drosophila erecta]
Length = 200
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 15 ECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 130 ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 186
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+DV E EDKYG++ + V G +Y+KF E A+KA+ L+ RWFGGR V
Sbjct: 515 LADDVKNEVEDKYGDVNFIKVERES----QGEIYVKFDSIESAKKAIEGLHGRWFGGRQV 570
Query: 68 YA 69
A
Sbjct: 571 SA 572
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 495 DDVRQEAESKYGHVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 550
Query: 70 ELSPVTD 76
SPV D
Sbjct: 551 --SPVVD 555
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 495 DDVRQEAESKYGHVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 550
Query: 70 ELSPVTD 76
SPV D
Sbjct: 551 --SPVVD 555
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF DV VE K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 243 YDEFFNDV-VEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 301
Query: 65 RPVYAELSPVTDFREACC 82
+ + E S + +R A C
Sbjct: 302 KRLNVEFSNLRTWRGAVC 319
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 333 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 389
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 330 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 386
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 472 DDVRQEAEEKYGHVVHISVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 527
Query: 70 ELSPVTD 76
SPV D
Sbjct: 528 --SPVVD 532
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV EC+ KYG + ++V G +Y+ F + + KA++ LN R+FGG+P
Sbjct: 591 DLAEDVKDECQAKYGPVTRIHVEK----ESAGEIYLTFADLDASRKALDGLNGRFFGGKP 646
Query: 67 VYAELSP 73
+ A+ P
Sbjct: 647 ISAQYIP 653
>gi|194877371|ref|XP_001973867.1| GG21408 [Drosophila erecta]
gi|190657054|gb|EDV54267.1| GG21408 [Drosophila erecta]
Length = 406
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 336 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 392
>gi|242069889|ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
gi|241936064|gb|EES09209.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
Length = 469
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G V +KF+ +DA K + +N RWF GR ++A
Sbjct: 382 DVREEC-IKFGPVDNVKVCEN---HPQGVVLVKFKDRKDAAKCIEKMNGRWFAGRQIHA 436
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF DV VE K+G I N +HL G+V++++ E A +A +L R++
Sbjct: 236 YDEFFNDV-VEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYAS 294
Query: 65 RPVYAELSPVTDFREACC 82
+ + E S + +R A C
Sbjct: 295 KRLNVEFSNLRTWRGAVC 312
>gi|317106644|dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
Length = 552
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC+N H G V ++F+ +DA+K + +N RWFGGR V+A
Sbjct: 466 DVKEECV-KLGPVDSVKVCEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQVHA 520
>gi|116007460|ref|NP_001036426.1| Spf45, isoform A [Drosophila melanogaster]
gi|30923530|gb|EAA46008.1| Spf45, isoform A [Drosophila melanogaster]
gi|83270221|gb|ABB99954.1| RNA binding motif protein 17 [Drosophila melanogaster]
gi|201065519|gb|ACH92169.1| FI02801p [Drosophila melanogaster]
Length = 403
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 333 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 389
>gi|449457363|ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 496
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 15 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
E K+G ++ + VC+N H G V I+F+ +DA+K + +N RWFGG+ ++A
Sbjct: 413 EESTKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHA 464
>gi|449518089|ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 498
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 15 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
E K+G ++ + VC+N H G V I+F+ +DA+K + +N RWFGG+ ++A
Sbjct: 415 EESTKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHA 466
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 5 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 64
YD FF DV E + K+G+I V N HL G+V++++ +E A +A +L R++
Sbjct: 234 YDAFFNDVVDELQ-KFGKIINFRVVCNTLPHLRGHVFVEYAQERYALRAFVNLQGRYYAS 292
Query: 65 RPVYAELSPVTDFREACC 82
R + E S + +R A C
Sbjct: 293 RRLNVEFSNLKAWRGAVC 310
>gi|109706823|gb|ABG42998.1| splicing factor 45 [Bombyx mori]
Length = 392
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ ++ + + N+ ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 321 ECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFY 380
Query: 73 PVTDF 77
V F
Sbjct: 381 DVEKF 385
>gi|302412845|ref|XP_003004255.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
gi|261356831|gb|EEY19259.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
Length = 227
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 154 DDVRQEAESKYGRVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 209
Query: 70 ELSPVTD 76
SPV D
Sbjct: 210 --SPVVD 214
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC KYG + + + + G +Y++F + A+KAV+ LN RWFGGR V A
Sbjct: 514 DDVKGECASKYGPVTALKIEKDSQ----GEIYVQFESVDSAKKAVDSLNGRWFGGRQVNA 569
Query: 70 EL 71
Sbjct: 570 RF 571
>gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]
gi|220948600|gb|ACL86843.1| Spf45-PC [synthetic construct]
gi|220958036|gb|ACL91561.1| Spf45-PC [synthetic construct]
Length = 379
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 15 ECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 309 ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 365
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+D+ E E +YG + + V N G+VY+KF + + E A+ LN R+FGGR + A
Sbjct: 489 DDIRAEAERQYGHVVHIAVDPNS----KGDVYLKFDKVQGGENAIKGLNGRYFGGRMINA 544
Query: 70 ELSPVTD 76
SPV D
Sbjct: 545 --SPVVD 549
>gi|195483222|ref|XP_002086892.1| GE10978 [Drosophila yakuba]
gi|194187173|gb|EDX00757.1| GE10978 [Drosophila yakuba]
Length = 367
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 15 ECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 297 ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 353
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E +YG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 491 DDVRQEAESRYGHVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 546
Query: 70 ELSPVTD 76
SPV D
Sbjct: 547 --SPVVD 551
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV ECE+KYG++ + V + G +Y+KF + A+ AV LN RWFGGR + A
Sbjct: 513 DDVKGECENKYGKVLAIKVEKDSQ----GEIYVKFDTVDTAKSAVQGLNGRWFGGRQISA 568
Query: 70 EL 71
Sbjct: 569 NF 570
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E+KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 496 DEVRQEAEEKYGHVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 551
Query: 70 ELSPVTD 76
SPV D
Sbjct: 552 --SPVVD 556
>gi|116007456|ref|NP_001036424.1| Spf45, isoform C [Drosophila melanogaster]
gi|51951005|gb|EAA46009.2| Spf45, isoform C [Drosophila melanogaster]
Length = 363
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 293 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 349
>gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]
Length = 363
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 15 ECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 293 ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 349
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+D+ E E +YG + + V N G+VY+KF + + E A+ LN R+FGGR + A
Sbjct: 485 DDIRAEAERQYGHVVHIAVDPNS----KGDVYLKFDKVQGGENAIKGLNGRYFGGRMINA 540
Query: 70 ELSPVTD 76
SPV D
Sbjct: 541 --SPVVD 545
>gi|194767538|ref|XP_001965872.1| GF15900 [Drosophila ananassae]
gi|190619348|gb|EDV34872.1| GF15900 [Drosophila ananassae]
Length = 401
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 331 ECHTKYGEVNSVIIHEAFGTAPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRA 387
>gi|195385190|ref|XP_002051289.1| GJ13092 [Drosophila virilis]
gi|194147746|gb|EDW63444.1| GJ13092 [Drosophila virilis]
Length = 432
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 362 ECNTKYGEVNSVIIHEAFGTVPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 421
Query: 73 PVTDFR 78
F+
Sbjct: 422 NFDKFK 427
>gi|195116165|ref|XP_002002626.1| GI11727 [Drosophila mojavensis]
gi|193913201|gb|EDW12068.1| GI11727 [Drosophila mojavensis]
Length = 438
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 368 ECNTKYGEVNSVIIHEAFGTVPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 427
Query: 73 PVTDFR 78
F+
Sbjct: 428 NFDKFK 433
>gi|195051308|ref|XP_001993070.1| GH13625 [Drosophila grimshawi]
gi|193900129|gb|EDV98995.1| GH13625 [Drosophila grimshawi]
Length = 451
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 381 ECNTKYGEVNSVIIHEAFGTVPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 440
Query: 73 PVTDFR 78
F+
Sbjct: 441 NFDKFK 446
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 493 DDVRQEAESKYGHVVHISADPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 548
Query: 70 ELSPVTD 76
SPV D
Sbjct: 549 --SPVVD 553
>gi|116007458|ref|NP_001036425.1| Spf45, isoform B [Drosophila melanogaster]
gi|46409150|gb|AAS93732.1| RE44883p [Drosophila melanogaster]
gi|51951006|gb|EAA46010.2| Spf45, isoform B [Drosophila melanogaster]
gi|220951092|gb|ACL88089.1| Spf45-PB [synthetic construct]
gi|220959676|gb|ACL92381.1| Spf45-PB [synthetic construct]
Length = 371
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 301 ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 357
>gi|198473430|ref|XP_002133257.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
gi|198139453|gb|EDY70659.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 348 ECNTKYGEVNSVIIHEAFGTSPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 407
Query: 73 PVTDFR 78
F+
Sbjct: 408 NFDKFK 413
>gi|195164546|ref|XP_002023107.1| GL21138 [Drosophila persimilis]
gi|194105192|gb|EDW27235.1| GL21138 [Drosophila persimilis]
Length = 418
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 348 ECNTKYGEVNSVIIHEAFGTSPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 407
Query: 73 PVTDFR 78
F+
Sbjct: 408 NFDKFK 413
>gi|195433330|ref|XP_002064668.1| GK23713 [Drosophila willistoni]
gi|194160753|gb|EDW75654.1| GK23713 [Drosophila willistoni]
Length = 443
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 15 ECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ + + + G ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 373 ECNTKYGEVNSVIIHEAFGTTPEDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFY 432
Query: 73 PVTDFR 78
F+
Sbjct: 433 NFDKFK 438
>gi|255543755|ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
Length = 518
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
D+ EC K G ++ + VC+N H G V +KF+ +DA+ + +N RWFGGR V+A
Sbjct: 432 DIREECV-KLGPVDSVKVCEN---HPQGVVLVKFKDRKDAQNCIELMNGRWFGGRQVHA 486
>gi|91083973|ref|XP_975149.1| PREDICTED: similar to splicing factor 45 [Tribolium castaneum]
gi|270006716|gb|EFA03164.1| hypothetical protein TcasGA2_TC013083 [Tribolium castaneum]
Length = 387
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAVNDLNNRWFG 63
D+ +V EC KYGE+ + + + ++ ++++FRR E A KAV DLN R+FG
Sbjct: 307 DDLEPEVKDECNTKYGEVTSVIIHETQAENPEEAVRIFVEFRRIESAIKAVVDLNGRFFG 366
Query: 64 GRPVYA 69
GR V A
Sbjct: 367 GRQVKA 372
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
K+GE+ VC N HL GNVY+ ++ EEDA A L+ R++ + V A S
Sbjct: 78 KFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLALSGRFYASKQVLARYS 131
>gi|225710884|gb|ACO11288.1| Splicing factor 45 [Caligus rogercresseyi]
Length = 417
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 6 DNFFE-DVFVECEDKYGEIEEMNV---CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
D F E +V EC +KYG++ ++ + ++ + ++I+F+R E A KAV DLN R+
Sbjct: 335 DEFLEPEVKEECNEKYGDVIKVVIYEFSNSSAEENAVRIFIEFKRVESAIKAVVDLNGRF 394
Query: 62 FGGRPVYAELSPVTDF 77
FGGR V A F
Sbjct: 395 FGGREVQANFYDCEKF 410
>gi|114051960|ref|NP_001040441.1| RNA binding motif protein 17 [Bombyx mori]
gi|95102902|gb|ABF51392.1| RNA binding motif protein 17 [Bombyx mori]
Length = 392
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ ++ + + N+ + ++F+R E A KAV DLN R+FGGR V A
Sbjct: 321 ECNTKYGEVVKVLIFEMPNVPSDEAVRILVEFKRMESAIKAVVDLNGRFFGGRQVKAGFY 380
Query: 73 PVTDF 77
V F
Sbjct: 381 DVEKF 385
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
++ YD FF D E + K+G+I N HL G+V++++ +E A +A +L R
Sbjct: 88 LRNDYDEFFNDAIGELQ-KFGKILNFRAVRNTLPHLRGHVFVEYAQERFALRAFVNLQGR 146
Query: 61 WFGGRPVYAELSPVTDFREACC 82
++ R + E S + +R A C
Sbjct: 147 YYASRRLQVEFSNLKGWRGAVC 168
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ +DV EC KYG ++ + V G +Y+ F + A +A+ LN RWFGGR
Sbjct: 274 DLADDVKSECATKYGPVQAIKVEK----ETQGEIYVLFETVDAAGQAIEGLNGRWFGGRQ 329
Query: 67 VYA 69
+ A
Sbjct: 330 ISA 332
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV E E+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 491 EDVRQEAEEKYGHVVHISLDPNSQ----GDIYLKFDRVQGGENAIKGLNGRYFGGRMITA 546
Query: 70 ELSPVTD 76
+PV D
Sbjct: 547 --APVVD 551
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV E E+KYG + +++ N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 497 EDVRQEAEEKYGHVVHISLDPNSQ----GDIYLKFDRVQGGENAIKGLNGRYFGGRMITA 552
Query: 70 ELSPVTD 76
+PV D
Sbjct: 553 --APVVD 557
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 47 EEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 101
EE+A +A+ N RW+ GR + E SPV ++ A C + C + CNF+H+
Sbjct: 156 EEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKGRGCNFLHV 210
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
E Y++ EDV E KYGE+ E+ + D +G V++ F+ DAEKA L
Sbjct: 439 EEYEDIIEDVREESS-KYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKAFAAL 497
Query: 58 NNRWFGGRPVYA 69
R FGG+ V A
Sbjct: 498 TGRRFGGKSVIA 509
>gi|357623541|gb|EHJ74651.1| splicing factor 45 [Danaus plexippus]
Length = 394
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
EC KYGE+ ++ + + N ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 323 ECNTKYGEVVKVLIFEMPNAPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFY 382
Query: 73 PVTDF 77
V F
Sbjct: 383 DVEKF 387
>gi|170054316|ref|XP_001863072.1| splicing factor 45 [Culex quinquefasciatus]
gi|167874592|gb|EDS37975.1| splicing factor 45 [Culex quinquefasciatus]
Length = 399
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEE--MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D+ +V EC KYG++ +N N+ ++++F+R E A KAV DLN R+FG
Sbjct: 320 DDLEPEVKDECHTKYGDVITVVINEIPNVVPEETVRIFVEFKRMESAIKAVVDLNGRFFG 379
Query: 64 GRPVYA 69
GR V A
Sbjct: 380 GRQVRA 385
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREEDAEKAVNDL 57
E Y++ EDV E KYGE+ E+ + D +G V++ F+ DAEKA L
Sbjct: 455 EEYEDIIEDVREESS-KYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKAFAAL 513
Query: 58 NNRWFGGRPVYA 69
R FGG+ V A
Sbjct: 514 TGRRFGGKSVIA 525
>gi|193613005|ref|XP_001950928.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
gi|193629687|ref|XP_001945492.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
Length = 404
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYG++ ++ + + N+ ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 333 ECNTKYGDVNKVVIYEVPNVDHEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKA 389
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E++YG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DEVRQEAEERYGHVVHISVDPNS----KGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
Query: 70 ELSPVTD 76
SPV D
Sbjct: 554 --SPVVD 558
>gi|449672593|ref|XP_004207745.1| PREDICTED: splicing factor 45-like [Hydra magnipapillata]
Length = 340
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 15 ECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
EC KYGEI ++ + D + + V ++++F+R E A KA+ DLN R+FGGR V A+
Sbjct: 269 ECGSKYGEINKVLIFEIPDAVEEEAV-RIFVEFKRIESAVKALVDLNGRFFGGRSVSAQF 327
Query: 72 SPVTDFR 78
+ FR
Sbjct: 328 YNLDRFR 334
>gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos taurus]
Length = 524
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R L+R S R+ R+ SR
Sbjct: 345 QAWDGTTDYQ--VEETTREREERMRGWEAFLNAPEANRGLQR---SNSIRAPERAGPSRV 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + + L + +G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 537 DDVRQEAEEKYGHVVHVA----LDPNSIGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 592
Query: 70 ELSPVTD 76
+PV D
Sbjct: 593 --APVVD 597
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 70
DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGG + A
Sbjct: 529 DVREEAEKKYGHVVHISVDPNSN----GDIYLKFDKVQGGENAIKGLNGRYFGGNIITA- 583
Query: 71 LSPVTD 76
+PV D
Sbjct: 584 -APVVD 588
>gi|332022266|gb|EGI62581.1| Splicing factor 45 [Acromyrmex echinatior]
Length = 383
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 4 HYDNFFE-DVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
DN E +V EC KYG++ + V + L + V ++++F+R E A KAV DLN
Sbjct: 300 EVDNDLEPEVKDECNTKYGDVARVIIHEVIEALPEEAV-RIFVEFKRIESAIKAVVDLNG 358
Query: 60 RWFGGRPVYA 69
R+FGGR V A
Sbjct: 359 RFFGGRTVKA 368
>gi|348684008|gb|EGZ23823.1| hypothetical protein PHYSODRAFT_255134 [Phytophthora sojae]
Length = 534
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 6 DNFFEDVFVECEDKYGEIEE---MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D ++V EC +KYG + + V ++ ++++F+ EDA KA+ LN R+F
Sbjct: 454 DELQDEVKGECSEKYGPVAKCTIYEVTGSVPPEEAVRIFVQFQDAEDATKALTGLNGRFF 513
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 514 GGRKVKA 520
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + + V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DDVRQEAEKKYGRVVHIAVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 553
Query: 70 ELSPVTD 76
SPV D
Sbjct: 554 --SPVVD 558
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 497 DDVRQEAESKYGRVVHISVDPNSK----GDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 552
Query: 70 ELSPVTD 76
SPV D
Sbjct: 553 --SPVVD 557
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 497 DDVRAEAEEKYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKGLNGRYFGGRMISA 552
Query: 70 ELSPVTD 76
+PV D
Sbjct: 553 --TPVVD 557
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL-----VGNVYIKFRREEDAEKAVNDL 57
+ Y + +EDV EC + YG +E++ + L VG VY+K++ E A A+N+L
Sbjct: 270 QEYGDLYEDVKEECSN-YGAVEDLRIPRPDAVRLDEASGVGRVYVKYKDSESATAALNNL 328
Query: 58 NNRWFGGRPVYAEL 71
R F GR + A L
Sbjct: 329 AGRSFAGRSIIATL 342
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 497 DDVRAEAEEKYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKGLNGRYFGGRMISA 552
Query: 70 ELSPVTD 76
+PV D
Sbjct: 553 --TPVVD 557
>gi|413924809|gb|AFW64741.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 475
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G + ++F+ +D K + +N RWF GR ++A
Sbjct: 388 DVREEC-IKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIEKMNGRWFAGRQIHA 442
>gi|223946691|gb|ACN27429.1| unknown [Zea mays]
Length = 316
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G + +KF+ +D K + +N RWF G+ ++A
Sbjct: 229 DVREEC-IKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEKMNGRWFAGQQIHA 283
>gi|158300105|ref|XP_320093.4| AGAP009296-PA [Anopheles gambiae str. PEST]
gi|157013841|gb|EAA15153.4| AGAP009296-PA [Anopheles gambiae str. PEST]
Length = 426
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D +V EC KYG++ + + + N+ ++++F+R E A KAV DLN R+FG
Sbjct: 346 DELEPEVKDECNTKYGDVVTVVIHEVPNVVPEEAVRIFVEFKRMESAIKAVVDLNGRFFG 405
Query: 64 GRPVYA 69
GR V A
Sbjct: 406 GRQVRA 411
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL----VGNVYIKFRREEDAEKAVNDL 57
QE Y+ EDV EC +K+G I ++ + G+ VG +Y++F E AEKA+ L
Sbjct: 486 QEEYEEILEDVTDEC-NKFGPIIDIKIPRPSGNQRAAAGVGKIYVRFEEHESAEKALKSL 544
Query: 58 NNRWFGGRPV 67
R F R V
Sbjct: 545 AGRKFADRTV 554
>gi|226496095|ref|NP_001141229.1| uncharacterized protein LOC100273316 [Zea mays]
gi|194703396|gb|ACF85782.1| unknown [Zea mays]
gi|413924810|gb|AFW64742.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 460
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G + ++F+ +D K + +N RWF GR ++A
Sbjct: 373 DVREEC-IKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIEKMNGRWFAGRQIHA 427
>gi|414588676|tpg|DAA39247.1| TPA: hypothetical protein ZEAMMB73_120405 [Zea mays]
Length = 544
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K+G ++ + VC+N H G + +KF+ +D K + +N RWF G+ ++A
Sbjct: 457 DVREEC-IKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEKMNGRWFAGQQIHA 511
>gi|296083389|emb|CBI23344.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 221 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 275
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC+ KYG + ++V + G +Y+ F + + KA++ LN R+FGG+P+ A
Sbjct: 584 EDVKEECQAKYGPVTSIHVEKDSA----GEIYVTFANLDASRKALDGLNGRFFGGKPISA 639
Query: 70 E 70
+
Sbjct: 640 Q 640
>gi|334311921|ref|XP_001368201.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 555
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ V D H G + ++ E+A+ + LN RWFGGR +
Sbjct: 401 EDLRSECE-KFGQVKKVLVFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLNV 456
Query: 70 EL-SPVTDFR 78
E+ VTDF+
Sbjct: 457 EVWDGVTDFQ 466
>gi|322800820|gb|EFZ21695.1| hypothetical protein SINV_12429 [Solenopsis invicta]
Length = 242
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 162 DDLEPEVKDECNTKYGDVARVIIHEVIEATPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 220
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 221 GGRQVKA 227
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV VE E+KYG + + V D + + G+VYI+F+ + AE+A L R+FGGR + A
Sbjct: 544 DDVKVEVENKYGHVARIKV-DKMSNK--GDVYIEFKDIDGAERAQRGLQGRFFGGRSLTA 600
Query: 70 E 70
+
Sbjct: 601 Q 601
>gi|296080862|emb|CBI18792.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 399 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 453
>gi|359495884|ref|XP_003635108.1| PREDICTED: HIV Tat-specific factor 1 homolog, partial [Vitis
vinifera]
Length = 322
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 235 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 289
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 492 DDVRQEAETKYGRVVHISVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 547
Query: 70 ELSPVTD 76
SPV D
Sbjct: 548 --SPVVD 552
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
Query: 70 ELSPVTDFREACCRQYEMG 88
+PV D + RQ G
Sbjct: 554 --APVVDAVYSKSRQPHEG 570
>gi|339244819|ref|XP_003378335.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
gi|316972769|gb|EFV56420.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
Length = 609
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCD---NLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
E D + ++ E K+GE+E++ + N + +++K+ E+AEKA + +N
Sbjct: 525 EEVDEYLQEEITEECGKFGEVEQVVIYQEKPNEDAPAIVKIFVKYSNPEEAEKAQSTFHN 584
Query: 60 RWFGGRPVYAELSPVTDF 77
R+F GR + AEL T F
Sbjct: 585 RFFSGRQITAELYDQTMF 602
>gi|242015516|ref|XP_002428399.1| Splicing factor, putative [Pediculus humanus corporis]
gi|212513011|gb|EEB15661.1| Splicing factor, putative [Pediculus humanus corporis]
Length = 402
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYGE+ ++ + D D + ++++F+R E A KAV DLN R+F
Sbjct: 322 DDLEPEVKDECNTKYGEVIKVLIFEMPDAPQDEAI-RIFVEFKRIESAIKAVVDLNGRFF 380
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 381 GGRQVKA 387
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 497 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 552
Query: 70 ELSPVTDFREACCRQYEMG 88
+PV D + RQ G
Sbjct: 553 --APVVDAVYSKSRQPHEG 569
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG-----NVYIKFRREEDAEKAVND 56
+E D E+V +EC KYG++ ++ + ++ DH+ +++ F A+ AV
Sbjct: 449 EEVDDELKEEVKIECS-KYGKVYDVRI--HISDHVSKPSDRVRIFVVFETNTMAQIAVPA 505
Query: 57 LNNRWFGGRPVYAEL 71
LNNRWFGG VY L
Sbjct: 506 LNNRWFGGNQVYCRL 520
>gi|330340363|ref|NP_001193343.1| HIV Tat-specific factor 1 [Bos taurus]
Length = 773
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R L+R S R+ R+ SR
Sbjct: 345 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRGLQR---SNSIRAPERAGPSRV 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|359496942|ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog [Vitis vinifera]
Length = 408
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 321 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 375
>gi|395860822|ref|XP_003802703.1| PREDICTED: HIV Tat-specific factor 1 homolog [Otolemur garnettii]
Length = 767
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ ++ LN RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDAEEADYCIHTLNGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|340719031|ref|XP_003397961.1| PREDICTED: splicing factor 45-like [Bombus terrestris]
Length = 382
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 302 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 360
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 361 GGRQVKA 367
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 492 DDVRQEAETKYGRVVHISVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 547
Query: 70 ELSPVTD 76
SPV D
Sbjct: 548 --SPVVD 552
>gi|350399021|ref|XP_003485388.1| PREDICTED: splicing factor 45-like [Bombus impatiens]
Length = 383
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 303 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 361
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 362 GGRQVKA 368
>gi|66516089|ref|XP_393194.2| PREDICTED: splicing factor 45-like [Apis mellifera]
gi|380028015|ref|XP_003697707.1| PREDICTED: splicing factor 45-like [Apis florea]
Length = 381
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 301 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 359
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 360 GGRQVKA 366
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC+ KYG + + + N G++Y+KF + E A+ LN R+FGGR + A
Sbjct: 531 DDVKEECQAKYGTVVHIALDPNTQ----GDIYVKFDTVQGGENAIKGLNGRFFGGRQITA 586
Query: 70 ELSPVTD 76
+ PV D
Sbjct: 587 Q--PVVD 591
>gi|389612784|dbj|BAM19802.1| conserved hypothetical protein, partial [Papilio xuthus]
Length = 396
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC KYG++ ++ + + N + ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 327 ECNTKYGDVIKVVIFEMPNAPNDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKA 383
>gi|307184500|gb|EFN70889.1| Splicing factor 45 [Camponotus floridanus]
Length = 380
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 300 DDLEPEVKDECNTKYGDVARVIIHEVIEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 358
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 359 GGRQVKA 365
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 7 NFFEDVFVECEDKY-GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
N EDV ECE K+ G +E++ V + G +YI+ + A++AV +L+ RWFGGR
Sbjct: 471 NLQEDVVAECESKFQGRVEKIVVEKDS----KGEIYIQCDSIDMAKRAVANLDGRWFGGR 526
Query: 66 PVYA 69
+ A
Sbjct: 527 QISA 530
>gi|383858690|ref|XP_003704832.1| PREDICTED: splicing factor 45-like [Megachile rotundata]
Length = 382
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 302 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 360
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 361 GGRQVKA 367
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
Query: 70 ELSPVTD 76
+PV D
Sbjct: 554 --APVVD 558
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
Query: 70 ELSPVTD 76
+PV D
Sbjct: 554 --APVVD 558
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 193 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 248
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 249 QAWDGTTDYQ 258
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL---------------------VGNVY 41
E Y + +EDV EC KYGE+E++ + + VG VY
Sbjct: 433 EEYGDLYEDVKEECS-KYGEVEDLRIPRPVKKDKAKWGEGQISAQDAQRIDEAAGVGRVY 491
Query: 42 IKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
+K+ E A KA+N L R F GR + A L
Sbjct: 492 VKYADTEGANKALNSLAGRSFAGRSIIATL 521
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 216 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 271
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 272 EAWDGTTDYQ 281
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 494 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 549
Query: 70 ELSPVTD 76
+PV D
Sbjct: 550 --APVVD 554
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFRDAEEADHCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R L+R S +S + SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLKGWEAFLNAPEANRSLQR---SDSVSASEMAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV E E KYG + +++ N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 469 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 524
Query: 70 ELSPVTD 76
+PV D
Sbjct: 525 --APVVD 529
>gi|156542185|ref|XP_001599827.1| PREDICTED: splicing factor 45 [Nasonia vitripennis]
Length = 383
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 6 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
D+ +V EC KYG++ + V D + V ++++F+R E A KAV DLN R+F
Sbjct: 303 DDLEPEVKDECNTKYGDVIRVVIHEVIDAQPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 361
Query: 63 GGRPVYA 69
GGR V A
Sbjct: 362 GGRQVKA 368
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ ++ L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIKKLILFDR---HPDGVASVSFRDPEEADYCIHTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|321465609|gb|EFX76609.1| hypothetical protein DAPPUDRAFT_306107 [Daphnia pulex]
Length = 381
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 ECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EC+ KYG++ ++ + N + ++++F+R E A KAV DLN R+F GR V A
Sbjct: 310 ECQTKYGDVNKVVIFEVPNAEEEEAVRIFVEFKRMEAAIKAVIDLNGRFFAGRQVKA 366
>gi|10798632|emb|CAC12816.1| hypothetical protein [Nicotiana tabacum]
Length = 86
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 19 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
K+G ++ + VC+N H G V +KF+ DA + +N RWF GR ++A
Sbjct: 6 KFGPVDLVKVCEN---HPQGVVLVKFKDRRDAHRCTEAMNGRWFAGRQIHA 53
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVC-DNLGDHL--VGNVYIKFRREEDAEKAVNDLNN 59
E Y + EDV EC+ ++G + M + G+ + +G +Y++F +EEDA A+ LN
Sbjct: 515 EEYADLAEDVEEECK-RFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNG 573
Query: 60 RWFGGRPVYAELSPVTDFRE 79
R FGG V PV F +
Sbjct: 574 RKFGGNIVKVTYFPVDKFEK 593
>gi|59862144|gb|AAH90381.1| htatsf1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 524
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 366 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 421
Query: 70 E-LSPVTDFR 78
E VTD++
Sbjct: 422 ESWDGVTDYQ 431
>gi|294462381|gb|ADE76739.1| unknown [Picea sitchensis]
Length = 525
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
D+ EC K G IE + V +N H +G + +KF+ D K + +N RWFGGR + A
Sbjct: 439 DIAEECS-KVGPIERIKVYEN---HPLGAILVKFKDRRDGLKCIQLMNGRWFGGRQIQA 493
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ EDV E E KYG ++ + V D + G+VY++F +E+AV L+ R+FGGR
Sbjct: 549 DLAEDVKGEIESKYGRVKRIKV-DKMS---AGDVYVEFEGTGASERAVKGLHGRFFGGRS 604
Query: 67 VYA 69
+ A
Sbjct: 605 LRA 607
>gi|159164131|pdb|2DIT|A Chain A, Solution Structure Of The Rrm_1 Domain Of Hiv Tat
Specific Factor 1 Variant
Length = 112
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 41 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 96
Query: 70 E 70
+
Sbjct: 97 Q 97
>gi|426257498|ref|XP_004022363.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ovis aries]
Length = 774
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + F+ E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFKDPEEADYCIQTLNGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R L+R S R+ R+ SR
Sbjct: 345 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRGLQR---SNSIRAPERAGPSRV 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|335306576|ref|XP_003360505.1| PREDICTED: HIV Tat-specific factor 1 homolog [Sus scrofa]
Length = 760
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 E 70
E
Sbjct: 345 E 345
>gi|296481686|tpg|DAA23801.1| TPA: HIV-1 Tat specific factor 1-like [Bos taurus]
Length = 766
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITA 344
Query: 70 ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRSR 129
+ T + E E R G+ F++ +R L+R S R+ R+ SR R
Sbjct: 345 QAWDGTTDCQVEETTSEREERLR-GWEAFLNAPEANRGLQR---SDSIRAPERAGSSRVR 400
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 290 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 345
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 346 QAWDGTTDYQ 355
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 30 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 85
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 86 EAWDGTTDYQ 95
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
D+ EC+ KYG + ++ G VY+KF ++ KAV LN R+FGGR + A
Sbjct: 525 DMREECDKKYGSVVHLDTASG---STGGEVYVKFAAKDGGIKAVQGLNGRFFGGRRLTA 580
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
E + + EDV EC+ KYG + ++ + ++ D G V++KF E A A LN+R+F
Sbjct: 407 EFFTDLVEDVKSECK-KYGNVLQVYINKSVPD---GMVWVKFATVEQAVAAFQSLNDRFF 462
Query: 63 GGRPVYAELSPVTDFREAC 81
GG + A + + C
Sbjct: 463 GGNSISAAFATNHTWLSTC 481
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + ++V D GNVY+K + A A+N+L+NRWF G+ + A
Sbjct: 581 DDVIEEC-NKHGGVLHIHV-DKASPQ--GNVYVKCPTAQIAMAALNNLHNRWFAGKMITA 636
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 637 AYMPVANY 644
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
D+ ++ E ++G I V +L G ++ F E+A KAV ++N R FGG+
Sbjct: 295 DSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 66 PVYAELSPVTDFREACCRQYEM 87
P+Y L+ + R+A +Q M
Sbjct: 355 PLYVGLAQRKEDRKAHLQQQYM 376
>gi|168001531|ref|XP_001753468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695347|gb|EDQ81691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 358
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K G IE + V +N H G V +KF+ + K + +N RWFGG+ + A
Sbjct: 273 EDVMTECT-KIGPIERLRVYEN---HPEGVVMVKFKDKTAGLKCIEIMNGRWFGGKQIEA 328
Query: 70 ELSPVT 75
P T
Sbjct: 329 FEDPGT 334
>gi|242092048|ref|XP_002436514.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
gi|241914737|gb|EER87881.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
Length = 384
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 6 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 293 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMVDLQGR 350
Query: 61 WFGGRPVYA 69
+FGGR V A
Sbjct: 351 FFGGRVVQA 359
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRNPEEADHCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|149731824|ref|XP_001494792.1| PREDICTED: splicing factor 45-like [Equus caballus]
Length = 401
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + LG D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEILGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|169642352|gb|AAI60527.1| htatsf1 protein [Xenopus (Silurana) tropicalis]
Length = 389
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 231 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 286
Query: 70 E-LSPVTDFR 78
E VTD++
Sbjct: 287 ESWDGVTDYQ 296
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E KYG + + + N G++Y+KF R + E A+ LN R+F GR + A
Sbjct: 617 DEVRAEAEAKYGHVVHIAIDPNSD----GDIYLKFDRVQGGENAIKGLNGRFFDGRTINA 672
Query: 70 ELSPVTD 76
+PV D
Sbjct: 673 --TPVVD 677
>gi|291408297|ref|XP_002720373.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 2 [Oryctolagus
cuniculus]
Length = 752
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|440907708|gb|ELR57819.1| HIV Tat-specific factor 1 [Bos grunniens mutus]
Length = 766
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITA 344
Query: 70 E 70
+
Sbjct: 345 Q 345
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADNCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|226497132|ref|NP_001149789.1| LOC100283416 [Zea mays]
gi|195634671|gb|ACG36804.1| splicing factor 45 [Zea mays]
Length = 382
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 6 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 291 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMIDLQGR 348
Query: 61 WFGGRPVYA 69
+FGGR V A
Sbjct: 349 FFGGRVVQA 357
>gi|194697730|gb|ACF82949.1| unknown [Zea mays]
gi|414885813|tpg|DAA61827.1| TPA: splicing factor 45 [Zea mays]
Length = 382
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 6 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 291 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMIDLQGR 348
Query: 61 WFGGRPVYA 69
+FGGR V A
Sbjct: 349 FFGGRVVQA 357
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 2 QEHYDNFFEDVFVECED---KYGEIEEMNVCDNLGDHLVGNVYIKFRR--EEDAEKAVND 56
+E D + D+ + ED K+GE+ + V D G G+VY+ F+ EE A+K+
Sbjct: 368 EEKDDGWELDIQDDVEDEGRKFGEVRHVRV-DVKGPG--GHVYMLFKEGEEEGAQKSAQA 424
Query: 57 LNNRWFGGRPVYAELSPVTDFREA 80
LN RWF GR + E P+ + E+
Sbjct: 425 LNGRWFAGRMIMVEYLPLARYLES 448
>gi|224112381|ref|XP_002316170.1| predicted protein [Populus trichocarpa]
gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC+N + G V +KF+ +DA+ + +N RWFGGR V A
Sbjct: 411 DVREECA-KLGPVDSVKVCEN---NPHGVVLVKFKDRKDAQSCIELMNGRWFGGRQVDA 465
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 201 DDVLEECA-KHGGVLHIHV-DTISH--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 256
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 257 AYVPVINY 264
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 326 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 381
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 382 QAWDGTTDYQ 391
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREEDAEKAVND 56
QE + E++ EC KYG +E + + DN ++ ++++F R +AE A +
Sbjct: 485 QEVDETLQEEIQDECS-KYGVVERVIIYNEKQSDNDDSDIIVKIFVEFSRTSEAESARDA 543
Query: 57 LNNRWFGGRPVYAEL 71
LN R+FGGR V L
Sbjct: 544 LNGRYFGGRLVKCSL 558
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
D+ ++ E ++G I V +L G ++ F E+A KAV ++N R FGG+
Sbjct: 295 DSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 66 PVYAELSPVTDFREACCRQYEM 87
P+Y L+ + R+A +Q M
Sbjct: 355 PLYVGLAQRKEDRKAHLQQQYM 376
>gi|209882250|ref|XP_002142562.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558168|gb|EEA08213.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 261
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 9 FEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 68
ED E K+G + +NV ++ H G V +KF++ EDAE AV+ LNNR+F GR +
Sbjct: 185 LEDEIYEEVSKFGTV--INVT-SIPRHPHGIVCVKFKKSEDAEIAVSYLNNRFFDGRQIE 241
Query: 69 AEL-SPVTDFREACC 82
A L TDF+ +
Sbjct: 242 AFLYDGKTDFKVSTL 256
>gi|334350282|ref|XP_001362589.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 444
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + ++ E+A+ + LN RWFGGR ++
Sbjct: 288 EDLRTECE-KFGQVKKVLLFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLHV 343
Query: 70 EL-SPVTDFR 78
E+ VTD++
Sbjct: 344 EVWDGVTDYQ 353
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 513 EDVLDECA-KHGGVLHIHV-DTVSP--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 568
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 569 AYVPVINY 576
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ V + ++++F + KA+ LNNRWFGGR V AE+
Sbjct: 459 QEKQGEEEDAEV--------IVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEV 505
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|297304889|ref|XP_001082302.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Macaca
mulatta]
gi|355705198|gb|EHH31123.1| hypothetical protein EGK_20983 [Macaca mulatta]
Length = 754
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVC--DNLGDHL--VGNVYIKFRREEDAEKAVNDLN 58
E ++N ED+ EC KYG+I + + G+ + +G V++++ EDA KA + LN
Sbjct: 306 EEFENIMEDMNEEC-GKYGKIISVVIPRPSKSGESVTGIGKVFVRYESVEDATKARDALN 364
Query: 59 NRWFGGRPVYAELSPVTDF 77
R FGG V A+ + F
Sbjct: 365 GRRFGGNSVVADFIDIESF 383
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 292 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 347
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 348 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 402
Query: 129 R 129
R
Sbjct: 403 R 403
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL---VGNVYIKFRREEDAEKAVNDLNN 59
+ Y++ D+ EC KYG+++ + + +GD G V+++F ED +KA+N L+
Sbjct: 346 DEYEDIRTDIKQECA-KYGKVKSLKIPRPIGDPPQTGCGKVFVRFESIEDCKKALNALSG 404
Query: 60 RWFGGRPVYAELSPVTDFR 78
R F GR V + ++
Sbjct: 405 RKFSGRIVMTSFYDLDKYK 423
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 284 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 339
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 340 AYVPVVNY 347
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 4 HYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
H+D + EDV EC+ KYG I V N G+VY+ F + A ND+N RW+
Sbjct: 374 HWDIDIQEDVRTECQ-KYGAILHCFVDKNSS----GDVYLMFDNMNSCQNAANDMNGRWY 428
Query: 63 GGRPVYAELSPVTDF 77
GR V P ++
Sbjct: 429 DGRVVQVSYMPSGEY 443
>gi|116310691|emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group]
gi|116310709|emb|CAH67506.1| OSIGBa0092E01.1 [Oryza sativa Indica Group]
gi|125548880|gb|EAY94702.1| hypothetical protein OsI_16479 [Oryza sativa Indica Group]
Length = 476
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC+N H G + +KF+ +D K + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|115459200|ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa Japonica Group]
gi|113564771|dbj|BAF15114.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|125590877|gb|EAZ31227.1| hypothetical protein OsJ_15326 [Oryza sativa Japonica Group]
Length = 476
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
DV EC K G ++ + VC+N H G + +KF+ +D K + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|224098794|ref|XP_002311268.1| predicted protein [Populus trichocarpa]
gi|222851088|gb|EEE88635.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 11 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 70
DV EC K G I+ + VC+N + G V ++F+ DA + + +N RWFGGR ++A
Sbjct: 538 DVREECV-KLGPIDSIKVCEN---NPHGVVLVRFKDRNDARRCIELMNGRWFGGREIHAS 593
Query: 71 -------LSPVTDFREACCRQYEMGECTRSG 94
+ V D E R + G +G
Sbjct: 594 EDDGLINHASVRDLDEDAARLEQFGAELEAG 624
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR
Sbjct: 345 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRSLRR---SNSICASERAGPSRV 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 290 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 345
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 346 QAWDGTTDYQ 355
>gi|402911564|ref|XP_003918392.1| PREDICTED: HIV Tat-specific factor 1 homolog [Papio anubis]
Length = 645
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 184 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 239
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 240 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 294
Query: 129 R 129
R
Sbjct: 295 R 295
>gi|412988900|emb|CCO15491.1| predicted protein [Bathycoccus prasinos]
Length = 457
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
Q D EDV EC K G++E V N G V ++F+ E A+ + ++NRW
Sbjct: 354 QTFSDELKEDVAEECRVKCGKVENAYVNAN------GVVTVRFKEPEGADACLQLMHNRW 407
Query: 62 FGGRPVYAEL 71
FGG+ + AE+
Sbjct: 408 FGGKQLKAEM 417
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 10 EDVFVECEDKYGEIEEMN-VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 68
ED E +YG++ E V D + + G ++KF EE+A KA +++N + GR +Y
Sbjct: 49 EDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDEMNGKVLNGRVIY 108
Query: 69 AELS 72
+++
Sbjct: 109 VDIA 112
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+D F E +KYG+I ++ + + G ++ F R EDA KAV++LN+ F G+ +Y
Sbjct: 249 DDEFRELFEKYGQITSASLAHDDQGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYV 308
Query: 70 ELSPVTDFREACCR-QYE 86
+ RE R QYE
Sbjct: 309 GRAQKKHEREEELRKQYE 326
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV E E KYG ++ + V G VYI+F + A KAV LN R+FGGR + A
Sbjct: 521 EDVKGEVESKYGRVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQA 576
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E +YG + ++V N G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 498 DEVRQEAEQRYGHVVHISVDPNSK----GDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
Query: 70 ELSPVTD 76
SPV D
Sbjct: 554 --SPVVD 558
>gi|197102050|ref|NP_001125576.1| HIV Tat-specific factor 1 homolog [Pongo abelii]
gi|75070769|sp|Q5RB63.1|HTSF1_PONAB RecName: Full=HIV Tat-specific factor 1 homolog
gi|55728510|emb|CAH90997.1| hypothetical protein [Pongo abelii]
Length = 754
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRR---SDSVSASERAGPSRA 399
Query: 129 R 129
R
Sbjct: 400 R 400
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 288 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 343
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
++ TD++ E G+ F++ ++ LRR S +S R+ SR
Sbjct: 344 QVWDGTTDYQ--VEETTREREERLKGWEAFLNAPEANKGLRR---SNSICASERAGPSRI 398
Query: 129 R 129
R
Sbjct: 399 R 399
>gi|255078502|ref|XP_002502831.1| predicted protein [Micromonas sp. RCC299]
gi|226518097|gb|ACO64089.1| predicted protein [Micromonas sp. RCC299]
Length = 244
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC K+G ++++ V + G V ++F+ DA+K V + RWFGGR + A
Sbjct: 159 EDVEAEC-GKFGAVDKVKVFTT---NPEGVVSVRFKDGGDAQKCVTAMKGRWFGGRQLEA 214
Query: 70 EL-SPVTDFREACCRQYEMGECTR 92
L T+F +A E E R
Sbjct: 215 SLWDGFTNFAKAGLESTEEDEAKR 238
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+D+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 286 DDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADHCIQTLDGRWFGGRQITA 341
Query: 70 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
+ TD++ E G+ F+ +R LRR
Sbjct: 342 QPWDGTTDYQ--VEETAREREERLKGWEAFLSTPEANRGLRR 381
>gi|307212516|gb|EFN88247.1| Splicing factor 45 [Harpegnathos saltator]
Length = 383
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D+ +V EC KYG++ + + ++++F+R E A KAV DLN R+FG
Sbjct: 303 DDLEPEVKDECNTKYGDVARVIIHEVMEAAAEEAVRIFVEFKRIESAIKAVVDLNGRFFG 362
Query: 64 GRPVYA 69
GR V A
Sbjct: 363 GRQVKA 368
>gi|345563187|gb|EGX46190.1| hypothetical protein AOL_s00110g14 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 42.0 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 8 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
+++ EC +KYG IE +++ + V+++F + A +AVN L R F G +
Sbjct: 462 LMQEIGDECSEKYGRIERVHIIHKQSEDAPSKVFVQFTSQLSALRAVNALEGRMFNGNTI 521
Query: 68 YAELSPVTDF 77
A V +F
Sbjct: 522 EARFFDVDEF 531
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E+KYG + +++ N G++Y+KF + E A+ LN R+F GR + A
Sbjct: 513 DEVRQEAEEKYGHVVHISLDPNS----QGDIYLKFDKVSGGENAIKGLNGRYFDGRMITA 568
Query: 70 ELSPVTD 76
+PV D
Sbjct: 569 --APVVD 573
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 7 NFFEDV----FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
NF ED+ E KYG + V + G G ++ F R EDA+KAV+D+N +
Sbjct: 197 NFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKEL 256
Query: 63 GGRPVY 68
GR VY
Sbjct: 257 NGRQVY 262
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIK----FRREEDAEKAVNDLN 58
E D+ E + KYG +E + + G+V IK F+ + A+KA+ LN
Sbjct: 610 EDVDDELEGEITDEATKYGIVERVVIYQERQSEKPGDVIIKIFILFQSADQAQKALTSLN 669
Query: 59 NRWFGGRPVYA 69
RWFGGR + A
Sbjct: 670 GRWFGGRQIKA 680
>gi|50729326|ref|XP_416473.1| PREDICTED: splicing factor 45 [Gallus gallus]
Length = 402
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 330 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 388
Query: 73 PVTDFR 78
+ FR
Sbjct: 389 NLDKFR 394
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 303 EDLRVECA-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 358
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR
Sbjct: 359 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRGLRR---SNSVCASERAGPSRV 413
Query: 129 R 129
R
Sbjct: 414 R 414
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 40 VYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++++F + E+A+ AV LNNRWFGGR V A+L
Sbjct: 554 IFVQFAQLEEADAAVLALNNRWFGGRQVRAQL 585
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
EDV E E KYG+++ + V G VYI+F + A KAV LN R+FGGR
Sbjct: 548 EDVKGEVESKYGKVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGR 599
>gi|157115517|ref|XP_001658243.1| hypothetical protein AaeL_AAEL007239 [Aedes aegypti]
gi|108876860|gb|EAT41085.1| AAEL007239-PA [Aedes aegypti]
Length = 419
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D +V EC KYG++ + + + + ++++F+R E A KAV DLN R+FG
Sbjct: 339 DELEPEVKDECNTKYGDVITVVIHEIPKVVPEETVRIFVEFKRMESAIKAVVDLNGRFFG 398
Query: 64 GRPVYA 69
GR V A
Sbjct: 399 GRQVRA 404
>gi|384247050|gb|EIE20538.1| hypothetical protein COCSUDRAFT_54348 [Coccomyxa subellipsoidea
C-169]
Length = 213
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNV---------CDNLGDHLVGNVYIKFRREEDAEKA 53
E Y + +D+ E E KYG + + + D G VG V+++F + DA KA
Sbjct: 128 EEYSDIVDDITSELESKYGTLSSLVIPQPSQKGPASDPSG---VGLVFVQFPKLSDAVKA 184
Query: 54 VNDLNNRWFGGRPVYAE 70
LN R FG +++E
Sbjct: 185 QEKLNGRKFGAGNIHSE 201
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 40 VYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++++F + E+A+ AV LNNRWFGGR V A+L
Sbjct: 526 IFVQFAQLEEADAAVLALNNRWFGGRQVRAQL 557
>gi|312382254|gb|EFR27775.1| hypothetical protein AND_05136 [Anopheles darlingi]
Length = 178
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D +V EC KYG++ + + N+ ++++F+R E A KAV DLN R+FG
Sbjct: 98 DELEPEVKDECNTKYGDVVTVVIHEVPNVVPEESVRIFVEFKRIESAIKAVVDLNGRFFG 157
Query: 64 GRPVYA 69
GR V A
Sbjct: 158 GRQVRA 163
>gi|156380987|ref|XP_001632048.1| predicted protein [Nematostella vectensis]
gi|156219098|gb|EDO39985.1| predicted protein [Nematostella vectensis]
Length = 396
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 15 ECEDKYGEIEEMNVCD---NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
EC KYGE+ ++ + + D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 323 ECA-KYGEVVKVIIYEIPVGAPDDEAVRIFVEFTRMESAIKAVVDLNGRYFGGRTVKANF 381
Query: 72 SPVTDFR 78
+ FR
Sbjct: 382 FNLDKFR 388
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 18 DKYGEIEEMNVCDNLGDHLVGNVYIK 43
K+GEIE +NVCDNL DH++G V ++
Sbjct: 66 GKFGEIESLNVCDNLADHMIGAVLLR 91
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 531 DDVLDECA-KHGGVLHIHV-DTVSP--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 586
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 587 AYVPVINY 594
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV E E KYG ++ + V G VYI+F + A KAV LN R+FGGR + A
Sbjct: 548 EDVKGEVESKYGRVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQA 603
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC K+G + ++V D G VY+K A AVN L+ RWF GR + A
Sbjct: 202 DDVLEECA-KHGGVLHIHV-DTASP--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 257
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 258 AYVPVVNY 265
>gi|326911058|ref|XP_003201879.1| PREDICTED: splicing factor 45-like [Meleagris gallopavo]
Length = 402
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 330 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 388
Query: 73 PVTDFR 78
+ FR
Sbjct: 389 NLDKFR 394
>gi|149436980|ref|XP_001510396.1| PREDICTED: splicing factor 45 isoform 2 [Ornithorhynchus anatinus]
Length = 401
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 10 EDVFVECEDKYGEIEEMN-VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 68
ED E +YG++ E V D + + G ++KF EE A KA ++N + GR +Y
Sbjct: 50 EDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGKVLNGRVIY 109
Query: 69 AELS 72
+++
Sbjct: 110 VDIA 113
>gi|384493179|gb|EIE83670.1| hypothetical protein RO3G_08375 [Rhizopus delemar RA 99-880]
Length = 475
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCD----NLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
D E+ EC KYG++E + + + +H +++KF E A++A+ DLN R+
Sbjct: 386 DMLQEETAEECS-KYGKVERCLIFEVPRGQVPEHKAVRIFVKFSDVESAKRAIQDLNGRF 444
Query: 62 FGGRPVYA 69
FGGR V A
Sbjct: 445 FGGRSVSA 452
>gi|224092741|ref|XP_002189506.1| PREDICTED: splicing factor 45 [Taeniopygia guttata]
Length = 401
Score = 41.6 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|255080772|ref|XP_002503959.1| predicted protein [Micromonas sp. RCC299]
gi|226519226|gb|ACO65217.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 2 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG-NVYIKFRREEDAEKAVNDLNNR 60
+E Y + EDV EC K G++ E+ + N D + N +++F +A+ AVN N R
Sbjct: 248 EEEYKDVCEDVLQEC-SKSGQVIELRIPRNSIDANIKCNAFVRFATAAEAKAAVNLFNGR 306
Query: 61 WFGGRPVYAELSPVTDFRE 79
F GR V A L P DF E
Sbjct: 307 KFDGRSVSAVLWPEEDFDE 325
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
D+ +V EC KYG + + + ++++F +DA++AV LN R+FGGR
Sbjct: 323 DHLGSEVKEECSQKYGPVRNCIIYKVVSHPEAIRIFVEFENVQDADRAVAGLNGRFFGGR 382
Query: 66 PVYAELSPVTDFR 78
V A + FR
Sbjct: 383 KVLATNYNESKFR 395
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 110
+ TD++ E G+ F++ +R LRR
Sbjct: 345 QAWDGATDYQ--VEETTREREERLRGWEAFLNAPEANRGLRR 384
>gi|449266291|gb|EMC77359.1| Splicing factor 45 [Columba livia]
Length = 401
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|71029064|ref|XP_764175.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351129|gb|EAN31892.1| hypothetical protein TP04_0540 [Theileria parva]
Length = 486
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
+N +V VEC +KYG + + + + + + +V++ F EDA+ AV LN RWF GR
Sbjct: 410 ENLANEVKVEC-NKYGTVTSVYLHFSANNDTL-SVFVVFNTPEDADNAVRALNTRWFNGR 467
Query: 66 PV 67
+
Sbjct: 468 QI 469
>gi|297807655|ref|XP_002871711.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297317548|gb|EFH47970.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 519
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 10 EDVFVECED-------KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
ED+ E E+ K+G + + VC++ H G V ++F+ DA+K + +N RW+
Sbjct: 423 EDLVAELEEDVKEESLKHGPFDSVKVCEH---HPQGVVLVRFKDRRDAQKCIEAMNGRWY 479
Query: 63 GGRPVYAEL 71
R ++A L
Sbjct: 480 AKRQIHASL 488
>gi|15237311|ref|NP_197130.1| HIV Tat-specific factor 1 [Arabidopsis thaliana]
gi|9755836|emb|CAC01867.1| putative protein [Arabidopsis thaliana]
gi|63003814|gb|AAY25436.1| At5g16260 [Arabidopsis thaliana]
gi|110738266|dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana]
gi|332004883|gb|AED92266.1| HIV Tat-specific factor 1 [Arabidopsis thaliana]
Length = 519
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 10 EDVFVECED-------KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
ED+ E E+ K+G + + VC++ H G V ++F+ DA+K + +N RW+
Sbjct: 423 EDLVAELEEDVKEESLKHGPFDSVKVCEH---HPQGVVLVRFKDRRDAQKCIEAMNGRWY 479
Query: 63 GGRPVYAEL 71
R ++A L
Sbjct: 480 AKRQIHASL 488
>gi|155371897|ref|NP_001094553.1| splicing factor 45 [Bos taurus]
gi|426240678|ref|XP_004014221.1| PREDICTED: splicing factor 45 [Ovis aries]
gi|154426050|gb|AAI51378.1| RBM17 protein [Bos taurus]
gi|296481516|tpg|DAA23631.1| TPA: RNA binding motif protein 17 [Bos taurus]
gi|440906277|gb|ELR56559.1| Splicing factor 45 [Bos grunniens mutus]
Length = 401
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|355782616|gb|EHH64537.1| 45 kDa-splicing factor [Macaca fascicularis]
Length = 401
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|149743592|ref|XP_001500189.1| PREDICTED: splicing factor 45 isoform 1 [Equus caballus]
Length = 401
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|395546036|ref|XP_003774900.1| PREDICTED: HIV Tat-specific factor 1 [Sarcophilus harrisii]
Length = 444
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ V D H G + ++ E+A+ + LN RWFGGR +
Sbjct: 289 EDLRTECE-KFGQVKKVLVFDR---HPDGVASVSYKEPEEADLCIQALNERWFGGRQLNV 344
Query: 70 EL-SPVTDFR 78
++ VTD++
Sbjct: 345 QVWDGVTDYQ 354
>gi|22779924|ref|NP_690037.1| splicing factor 45 [Mus musculus]
gi|34925312|sp|Q8JZX4.1|SPF45_MOUSE RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|3746840|gb|AAC64085.1| 45kDa splicing factor [Mus musculus]
gi|22028328|gb|AAH34896.1| RNA binding motif protein 17 [Mus musculus]
Length = 405
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 333 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 391
Query: 73 PVTDFR 78
+ FR
Sbjct: 392 NLDKFR 397
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|348536528|ref|XP_003455748.1| PREDICTED: splicing factor 45-like [Oreochromis niloticus]
Length = 403
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCD--NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + + D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 331 ECE-KYGKVVKCVIFEIAEVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 389
Query: 73 PVTDFR 78
+ FR
Sbjct: 390 NLDKFR 395
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ +DV EC+ K+G +E++ + + ++ GNV+I+F + A A LN R+F G+P
Sbjct: 571 DLGDDVRDECK-KFGSVEKVWIDER---NVDGNVWIRFAHPDQARAAFGALNGRYFAGKP 626
Query: 67 VYAEL 71
+ AE
Sbjct: 627 ISAEF 631
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 542 DDVLEECT-KHGGVLHIHV-DTVS--ATGTVYVKCPSTATAVLAVNSLHGRWFAGRVITA 597
Query: 70 ELSPVTDF 77
P+ ++
Sbjct: 598 AYVPLINY 605
>gi|348518982|ref|XP_003447010.1| PREDICTED: HIV Tat-specific factor 1 homolog [Oreochromis
niloticus]
Length = 452
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
+ + ED+ ECE K+GE++++ + D H G + F+ E A+ + N RWFGGR
Sbjct: 299 NEYREDLRSECE-KFGEVKKVILFDR---HPDGVASVAFKEPEQADACILSFNGRWFGGR 354
Query: 66 PVYAEL 71
+ A+L
Sbjct: 355 QLSAQL 360
>gi|14249678|ref|NP_116294.1| splicing factor 45 [Homo sapiens]
gi|224549005|ref|NP_001139019.1| splicing factor 45 [Homo sapiens]
gi|383873015|ref|NP_001244661.1| splicing factor 45 [Macaca mulatta]
gi|114629220|ref|XP_001147496.1| PREDICTED: splicing factor 45 isoform 5 [Pan troglodytes]
gi|114629223|ref|XP_001147721.1| PREDICTED: splicing factor 45 isoform 7 [Pan troglodytes]
gi|297685979|ref|XP_002820545.1| PREDICTED: splicing factor 45 isoform 1 [Pongo abelii]
gi|297685981|ref|XP_002820546.1| PREDICTED: splicing factor 45 isoform 2 [Pongo abelii]
gi|332217040|ref|XP_003257661.1| PREDICTED: splicing factor 45 [Nomascus leucogenys]
gi|397515197|ref|XP_003827843.1| PREDICTED: splicing factor 45 [Pan paniscus]
gi|402879580|ref|XP_003903412.1| PREDICTED: splicing factor 45 isoform 1 [Papio anubis]
gi|402879582|ref|XP_003903413.1| PREDICTED: splicing factor 45 isoform 2 [Papio anubis]
gi|34925383|sp|Q96I25.1|SPF45_HUMAN RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|14043850|gb|AAH07871.1| RNA binding motif protein 17 [Homo sapiens]
gi|25058249|gb|AAH39322.1| RBM17 protein [Homo sapiens]
gi|33328180|gb|AAQ09533.1| unknown [Homo sapiens]
gi|119606811|gb|EAW86405.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|119606816|gb|EAW86410.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|189067475|dbj|BAG37457.1| unnamed protein product [Homo sapiens]
gi|261861104|dbj|BAI47074.1| RNA binding motif protein 17 [synthetic construct]
gi|312152378|gb|ADQ32701.1| RNA binding motif protein 17 [synthetic construct]
gi|355562276|gb|EHH18870.1| 45 kDa-splicing factor [Macaca mulatta]
gi|380784085|gb|AFE63918.1| splicing factor 45 [Macaca mulatta]
gi|383414113|gb|AFH30270.1| splicing factor 45 [Macaca mulatta]
gi|410227696|gb|JAA11067.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410251468|gb|JAA13701.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410303376|gb|JAA30288.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410336885|gb|JAA37389.1| RNA binding motif protein 17 [Pan troglodytes]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|395827373|ref|XP_003786879.1| PREDICTED: splicing factor 45 [Otolemur garnettii]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|350589637|ref|XP_003130870.3| PREDICTED: splicing factor 45 [Sus scrofa]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|332374526|gb|AEE62404.1| unknown [Dendroctonus ponderosae]
Length = 392
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGD--HLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
D+ +V EC KYG + + + D ++++F+R E A KAV DLN R+FG
Sbjct: 312 DDLEPEVKDECNTKYGPVASCIIHEIPHDDPEEAVRIFVEFQRIESAIKAVVDLNGRFFG 371
Query: 64 GRPVYAELSPVTDF 77
GR V A F
Sbjct: 372 GRQVKATFYDTEKF 385
>gi|344277716|ref|XP_003410644.1| PREDICTED: splicing factor 45 [Loxodonta africana]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|327286675|ref|XP_003228055.1| PREDICTED: HIV Tat-specific factor 1-like [Anolis carolinensis]
Length = 533
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ E+A+ L+ RWFGGR +
Sbjct: 375 EDLRSECE-KFGQVKKVIIFDR---HPDGVASVSFKEAEEADVCKQALDGRWFGGRQLSV 430
Query: 70 EL-SPVTDFR 78
E VTD++
Sbjct: 431 ETWDGVTDYQ 440
>gi|73949102|ref|XP_849339.1| PREDICTED: splicing factor 45 isoform 2 [Canis lupus familiaris]
gi|301769963|ref|XP_002920393.1| PREDICTED: splicing factor 45-like [Ailuropoda melanoleuca]
gi|410963149|ref|XP_003988128.1| PREDICTED: splicing factor 45 [Felis catus]
gi|281347515|gb|EFB23099.1| hypothetical protein PANDA_009135 [Ailuropoda melanoleuca]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|61556823|ref|NP_001013076.1| splicing factor 45 [Rattus norvegicus]
gi|354465034|ref|XP_003494985.1| PREDICTED: splicing factor 45 [Cricetulus griseus]
gi|50927039|gb|AAH79248.1| RNA binding motif protein 17 [Rattus norvegicus]
gi|344238978|gb|EGV95081.1| Splicing factor 45 [Cricetulus griseus]
Length = 405
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 333 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 391
Query: 73 PVTDFR 78
+ FR
Sbjct: 392 NLDKFR 397
>gi|417400279|gb|JAA47094.1| Putative mrna splicing factor [Desmodus rotundus]
Length = 401
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 421 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 476
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 477 AYVPVVNY 484
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 444 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 499
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 500 AYVPVVNY 507
>gi|351708186|gb|EHB11105.1| Splicing factor 45 [Heterocephalus glaber]
Length = 405
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 333 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 391
Query: 73 PVTDFR 78
+ FR
Sbjct: 392 NLDKFR 397
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 422 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 478 AYVPVVNY 485
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 446 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 501
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 502 AYVPVVNY 509
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 422 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 478 AYVPVVNY 485
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 434 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 489
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 490 AYVPVVNY 497
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 442 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 497
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 498 AYVPVVNY 505
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 443 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 498
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 499 AYVPVVNY 506
>gi|296206115|ref|XP_002750072.1| PREDICTED: splicing factor 45 [Callithrix jacchus]
Length = 401
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ +DV EC+ K+G +E++ + + ++ GNV+I+F + A A LN R+F G+P
Sbjct: 562 DLGDDVRDECK-KFGSVEKVWIDER---NVDGNVWIRFAHPDQARAAFGALNGRYFAGKP 617
Query: 67 VYAEL 71
+ AE
Sbjct: 618 ISAEF 622
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 7 NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRP 66
+ +DV EC+ K+G +E++ + + ++ GNV+I+F + A A LN R+F G+P
Sbjct: 562 DLGDDVRDECK-KFGSVEKVWIDER---NVDGNVWIRFAHPDQARAAFGALNGRYFAGKP 617
Query: 67 VYAEL 71
+ AE
Sbjct: 618 ISAEF 622
>gi|126340342|ref|XP_001362735.1| PREDICTED: splicing factor 45 isoform 2 [Monodelphis domestica]
gi|395538974|ref|XP_003771449.1| PREDICTED: splicing factor 45 [Sarcophilus harrisii]
Length = 401
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|431917634|gb|ELK16899.1| Splicing factor 45 [Pteropus alecto]
Length = 401
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVC---DNLGDHLVGNVYIKFRREEDAEKAVNDLNN 59
E Y + EDV EC+ ++G + M + D +G +Y++F +EEDA A+ LN
Sbjct: 14 EEYADLAEDVEEECK-RFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNG 72
Query: 60 RWFGGRPVYAELSPVTDF 77
R FGG V PV F
Sbjct: 73 RKFGGNIVKVTYFPVDKF 90
>gi|452823570|gb|EME30579.1| RNA-binding protein [Galdieria sulphuraria]
Length = 400
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 4 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 63
+Y++ +D+ EC K GEIE++ V + + G V ++FR AE + + RW+G
Sbjct: 293 YYEDIRKDMLEECS-KLGEIEKLTVFERNPE---GVVAVRFRSPAAAESCIELMTGRWYG 348
Query: 64 GRPVYAEL-SPVTDFR 78
GR + AE TD+R
Sbjct: 349 GRQLEAEFYDGKTDYR 364
>gi|403300078|ref|XP_003940786.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 743
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|403296380|ref|XP_003939089.1| PREDICTED: splicing factor 45 [Saimiri boliviensis boliviensis]
Length = 401
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 ILDKFR 393
>gi|318087106|gb|ADV40145.1| putative apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Latrodectus hesperus]
Length = 332
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 1 MQEHYDNFFEDV----FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 56
M + NF +D+ E +KYG+I V + G ++ F E+AEKAVND
Sbjct: 174 MNVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVND 233
Query: 57 LNNRWFGGRPVYA 69
LNN+ G+ +Y
Sbjct: 234 LNNKELNGKVLYV 246
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 430 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 485
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 486 AYVPVVNY 493
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K E A +V L+ RWFGGR + A
Sbjct: 417 DDVIEEC-NKHGGVLHVYV-DKASPQ--GNVYVKCTTIETALASVAALHGRWFGGRVITA 472
Query: 70 ELSPVTDF 77
PVT++
Sbjct: 473 AYVPVTNY 480
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVC------DNLGDHLVGNVYIKFRREEDAEKAVND 56
+ Y+ EDV EC KYG++EE+ + +N G VG +++K+ E A+KA+
Sbjct: 266 QEYEEIQEDVHEECS-KYGKVEELKIPRPQPPKENKG---VGKIFVKYDTPESAQKALRA 321
Query: 57 LNNRWFGGRPV 67
L R F R V
Sbjct: 322 LAGRKFADRTV 332
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 3 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL----VGNVYIKFRREEDAEKAVNDLN 58
+ Y+ EDV EC+ K+G + + + +G + VG +Y+KF + E A KA+ L
Sbjct: 502 DDYEEIREDVLEECK-KFGNVLSLKIPRPIGGNRQSAGVGKIYVKFEQVESATKALRALA 560
Query: 59 NRWFGGRPVYAELSPVTDFREAC 81
R F R V P ++ C
Sbjct: 561 GRKFSDRTVVTTYFPEENYEVNC 583
>gi|115435210|ref|NP_001042363.1| Os01g0209500 [Oryza sativa Japonica Group]
gi|56201520|dbj|BAD73039.1| putative Not4-Np [Oryza sativa Japonica Group]
gi|113531894|dbj|BAF04277.1| Os01g0209500 [Oryza sativa Japonica Group]
Length = 799
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 19 KYGEIEEMNVCDNLGDHL----VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPV 74
+YG+IE + + DN+G + G VY+ F REE+A + + +N GRP+ A V
Sbjct: 95 QYGKIESI-IIDNIGANQQIPDSGRVYVTFSREEEAFRCIEAVNGFILDGRPLKATFG-V 152
Query: 75 TDFREACCRQYEMGECTRSGFCNFMHLK 102
T + C + + R C+++H K
Sbjct: 153 TRY----CHVWLSNKVCRKPICSYVHQK 176
>gi|410915234|ref|XP_003971092.1| PREDICTED: HIV Tat-specific factor 1 homolog [Takifugu rubripes]
Length = 439
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VECE K+G ++++ + D H G + F+ ++A+ + N RWFGGR + A
Sbjct: 299 EDLRVECE-KFGAVKKVILFDR---HPDGVASVAFKEPDEADACIQSFNGRWFGGRQLSA 354
Query: 70 EL 71
+
Sbjct: 355 QF 356
>gi|432895861|ref|XP_004076198.1| PREDICTED: HIV Tat-specific factor 1-like [Oryzias latipes]
Length = 454
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
+ + ED+ ECE K+G ++++ + D H G + F+ E+A+ V N RWFGGR
Sbjct: 295 NEYREDLRTECE-KFGGVKKVVLFDR---HPDGVASVAFKEPEEADACVLSFNGRWFGGR 350
Query: 66 PVYAEL-SPVTDFR 78
+ A L TD++
Sbjct: 351 QLIAHLWDGTTDYQ 364
>gi|226500638|ref|NP_001149001.1| splicing factor 45 [Zea mays]
gi|195623866|gb|ACG33763.1| splicing factor 45 [Zea mays]
Length = 384
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 6 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 60
D ++V EC +YG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 293 DELEDEVASECA-RYGTVSRVLIFEITQADFPSDEAV-RIFIQFERAEEATKAMVDLQGR 350
Query: 61 WFGGRPVYA 69
+FGGR V A
Sbjct: 351 FFGGRVVQA 359
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNV---CDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNR 60
D+ ++DV ECE K G +E++ + C G +G V++KF+ A+KA LN R
Sbjct: 395 DDLYQDVMTECE-KIGPVEKIEIPKPCKTTGICPPCIGKVFVKFKYMLKAKKARYSLNGR 453
Query: 61 WFGGRPVYAELSPVTDF 77
+ R V A P F
Sbjct: 454 TYNRRTVIASFYPEDKF 470
>gi|432089731|gb|ELK23548.1| Splicing factor 45 [Myotis davidii]
Length = 440
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 368 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY 426
Query: 73 PVTDFR 78
+ FR
Sbjct: 427 NLDKFR 432
>gi|296236526|ref|XP_002763352.1| PREDICTED: HIV Tat-specific factor 1 homolog [Callithrix jacchus]
Length = 744
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 290 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 345
Query: 70 EL-SPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSSRSRS 128
+ TD++ E G+ F++ +R LRR S +S R+ SR+
Sbjct: 346 QAWDGTTDYQ--VEETSREREERLRGWEAFLNAPESNRGLRR---SDSVSASARAGPSRA 400
Query: 129 R 129
R
Sbjct: 401 R 401
>gi|343958878|dbj|BAK63294.1| splicing factor 45 [Pan troglodytes]
Length = 401
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V
Sbjct: 329 ECE-KYGKVGKCVIFETPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKVCFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G I + V N GNVY+K A VN L+ RWF G+ + A
Sbjct: 156 DDVIEEC-NKHGGIVHIYVDKNSAQ---GNVYVKCPSIPAAMATVNALHGRWFAGKMITA 211
Query: 70 ELSPVTDF 77
P+ +
Sbjct: 212 AYVPLPTY 219
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 287 DDVMDEC-NKHGGVLHIYV-DKASPQ--GNVYVKCPSVTVAVNAVNALHGRWFAGRIITA 342
Query: 70 ELSPVTDF 77
P+ ++
Sbjct: 343 AYVPLINY 350
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 7 NFFEDVFVECEDKYGEIEEMNV-CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
N ED+ + +G+IE M + D G +I FR EDA+KA+ LN GR
Sbjct: 120 NITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFELAGR 179
Query: 66 PV 67
P+
Sbjct: 180 PM 181
>gi|356576849|ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 392
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCD----NLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 61
D ++V EC KYG + + + + N H ++++F R E+ KA+ DL+ R+
Sbjct: 302 DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVHEAVRIFVQFERSEETTKALVDLDGRY 360
Query: 62 FGGRPVYAEL 71
FGGR V A
Sbjct: 361 FGGRVVRASF 370
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ ++ + ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 467 QEKQGEEEDADI--------IVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEV 513
>gi|317420076|emb|CBN82112.1| Poly(U)-binding-splicing factor PUF60 [Dicentrarchus labrax]
Length = 513
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ ++ + ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 454 QEKQGEEEDADI--------IVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEV 500
>gi|147906402|ref|NP_001089093.1| RNA binding motif protein 17 [Xenopus laevis]
gi|112419030|gb|AAI22486.1| LOC733282 protein [Xenopus laevis]
Length = 400
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 16 CEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 73
CE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 331 CE-KYGKVAKCVIFEIPGAPDEEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKAGFYN 389
Query: 74 VTDFR 78
+ FR
Sbjct: 390 LDKFR 394
>gi|432929636|ref|XP_004081203.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 526
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ ++ + ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 467 QEKQGEEEDADI--------IVKIFVEFSAASEMNKAIQALNDRWFGGRKVVAEV 513
>gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ ++ + ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 461 QEKQGEEEDADI--------IVKIFVEFSAASEMNKAIQALNDRWFGGRKVVAEV 507
>gi|410909355|ref|XP_003968156.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 526
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ ++ + ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 467 QEKQGEEEDADI--------IVKIFVEFSAASEMNKAIQALNDRWFGGRKVVAEV 513
>gi|444722708|gb|ELW63388.1| HIV Tat-specific factor 1 [Tupaia chinensis]
Length = 449
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+D+ VEC K+G+I+++ + D H G + FR ++A+ + L+ RWFGGR + A
Sbjct: 289 KDLQVECS-KFGKIKKLLLFDR---HPDGVASVSFRDPQEADYCIRTLDGRWFGGRQITA 344
Query: 70 EL-SPVTDFR 78
++ TD++
Sbjct: 345 QVWDGTTDYQ 354
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D L GNVY+K A AVN L+ RWF GR + A
Sbjct: 477 DDVIEEC-NKHGGVLHVYV-DKLSPS--GNVYVKCPNVATAVLAVNALHGRWFAGRVIGA 532
Query: 70 ELSPVTDF 77
P+ ++
Sbjct: 533 AYVPLVNY 540
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 6 DNFFEDVFVECEDKYGEIEE--MNVCDNLG---DHLVGNVYIKFRREEDAEKAVNDLNNR 60
D E+V +EC KYG++ + ++V +N+ D + +++ F A+ AV LNNR
Sbjct: 535 DELKEEVKIECS-KYGKVYDVRIHVSNNISKPSDRV--RIFVVFESPSMAQIAVPALNNR 591
Query: 61 WFGGRPVYAEL 71
WFGG V+ L
Sbjct: 592 WFGGNQVFCSL 602
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 6 DNFFEDVFVECEDKYGEIEE--MNVCDNLG---DHLVGNVYIKFRREEDAEKAVNDLNNR 60
D E+V +EC KYG++ + ++V +N+ D + +++ F A+ AV LNNR
Sbjct: 613 DELKEEVKIECS-KYGKVYDVRIHVSNNISKPSDRV--RIFVVFESPSMAQIAVPALNNR 669
Query: 61 WFGGRPVYAEL 71
WFGG V+ L
Sbjct: 670 WFGGNQVFCSL 680
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 7 NFFEDVFVECEDK----YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 62
NF EDV +C ++ +G+ + V + H G ++ F + E+A+KAVN +N +
Sbjct: 182 NFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKAVNSMNGKAL 241
Query: 63 GGRPVY 68
GGR +Y
Sbjct: 242 GGRVLY 247
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 508 DDVLEECA-KHGGVLHIHV-DTVSP--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 563
Query: 70 ELSPVTDF 77
P+ ++
Sbjct: 564 AYVPLVNY 571
>gi|55742338|ref|NP_001006732.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|49523277|gb|AAH75485.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|89268723|emb|CAJ82819.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
Length = 399
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 72
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGTPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKACFY 387
Query: 73 PVTDFR 78
+ FR
Sbjct: 388 NLDKFR 393
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
EDV EC +K+G + + V N GNVY+K A AVN L+ RWF G+ + A
Sbjct: 458 EDVIEEC-NKHGGVVHLYVDKNSAQ---GNVYVKCPTIASAIAAVNALHGRWFAGKMITA 513
Query: 70 ELSPVTDF 77
P+ +
Sbjct: 514 AYVPLPTY 521
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 420 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIGTAVAAVNSLHGRWFAGRVITA 475
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 476 AYVPVVNY 483
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
++V E E+KYG + + V N G++Y+KF + + E A+ LN R+F GR + A
Sbjct: 521 DEVRQEAEEKYGHVVHIAVDPNSN----GDIYLKFDKVQGGENAIKGLNGRYFDGRMITA 576
Query: 70 ELSPVTD 76
+PV D
Sbjct: 577 --APVVD 581
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 38 GNVYIKFRREEDAEKAVNDLNNRWFGGRPV 67
G ++ FR +++AE+A+N++N +W G RP+
Sbjct: 182 GYGFVSFRSKQEAERAINEMNGKWLGSRPI 211
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 420 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIGTAVAAVNSLHGRWFAGRVITA 475
Query: 70 ELSPVTDF 77
PV ++
Sbjct: 476 AYVPVVNY 483
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVC-DNLGDH----LVGNVYIKFRREEDAEKAVNDLNNR 60
D+ +V EC KYG+++ + + + G+ ++ ++++F + +A+ LNNR
Sbjct: 441 DDLEGEVTEEC-GKYGQVKRVIIYQERQGEEDDADIIVKIFVEFCEAMEMNRAIQALNNR 499
Query: 61 WFGGRPVYAEL 71
WFGGR V AE+
Sbjct: 500 WFGGRKVVAEV 510
>gi|428172624|gb|EKX41532.1| hypothetical protein GUITHDRAFT_112506 [Guillardia theta CCMP2712]
Length = 514
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 10 EDVFVECEDKYGEIEEMNVC----DNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
ED +CE++YG++ + + L+GNV ++F +E A KA NDLN+ F R
Sbjct: 430 EDTISKCEEEYGKVVRFVIVRPGREGAPADLIGNVLVQFETKESAIKAANDLNHVKFDER 489
Query: 66 PV 67
V
Sbjct: 490 VV 491
>gi|444705508|gb|ELW46932.1| HIV Tat-specific factor 1 like protein [Tupaia chinensis]
Length = 623
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ VEC K+G+I+++ + D H G + FR ++A+ + L+ RWFGGR + A
Sbjct: 168 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPDEADLCIQTLDGRWFGGRQITA 223
Query: 70 EL-SPVTDFR 78
+ TD++
Sbjct: 224 QAWDGTTDYQ 233
>gi|320583656|gb|EFW97869.1| hypothetical protein HPODL_0499 [Ogataea parapolymorpha DL-1]
Length = 873
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 52 KAVNDLNNRWFGGRPVYAELSPVTDFREA 80
K + N+RW+ G+PV+AELSPVT+ +A
Sbjct: 2 KCYKECNDRWYNGKPVFAELSPVTNLDDA 30
>gi|37590291|gb|AAH59346.1| LOC398736 protein, partial [Xenopus laevis]
Length = 477
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ + + + LN RWFGGR +
Sbjct: 319 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEANEGDLCIQALNGRWFGGRQLAV 374
Query: 70 E-LSPVTDFR 78
E VTD++
Sbjct: 375 EPWDGVTDYQ 384
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 17 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++K GE E+ + + ++++F + KA+ DLN RWF GR V AE+
Sbjct: 471 QEKQGEEEDAEI--------IVKIFVEFSVASETHKAIQDLNGRWFAGRKVVAEV 517
>gi|403223876|dbj|BAM42006.1| uncharacterized protein TOT_040000383 [Theileria orientalis strain
Shintoku]
Length = 478
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 65
+N +V EC +KYG + + + + D L +V++ F EDAE AV LN RWF GR
Sbjct: 403 ENLPNEVKEEC-NKYGLVTSVYLHFSPNDTL--SVFVVFNTVEDAENAVRSLNTRWFNGR 459
Query: 66 PVYAEL 71
+ +L
Sbjct: 460 QLMCKL 465
>gi|301606045|ref|XP_002932639.1| PREDICTED: HIV Tat-specific factor 1 homolog [Xenopus (Silurana)
tropicalis]
Length = 452
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 294 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 349
Query: 70 E-LSPVTDFR 78
E VTD++
Sbjct: 350 ESWDGVTDYQ 359
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVC-DNLGDH----LVGNVYIKFRREEDAEKAVNDLNNR 60
D+ +V EC KYG + + + + G+ ++ ++++F + KA+ LNNR
Sbjct: 420 DDLEGEVMEEC-GKYGAVNRVIIYQERQGEEDDAEIIVKIFVEFSDAGEMNKAIQALNNR 478
Query: 61 WFGGRPVYAEL 71
WF GR V AEL
Sbjct: 479 WFAGRKVVAEL 489
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 6 DNFFEDVFVECEDKYGEIEEMNVC-DNLGDH----LVGNVYIKFRREEDAEKAVNDLNNR 60
D+ +V EC KYG + + + + G+ ++ ++++F + KA+ LNNR
Sbjct: 434 DDLEGEVMEEC-GKYGAVNRVIIYQERQGEEDDAEIIVKIFVEFSDAGEMNKAIQALNNR 492
Query: 61 WFGGRPVYAEL 71
WF GR V AEL
Sbjct: 493 WFAGRKVVAEL 503
>gi|14290573|gb|AAH09064.1| RBM17 protein, partial [Homo sapiens]
Length = 369
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 297 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 352
>gi|67772135|gb|AAY79320.1| RNA-binding protein SiahBP [Siniperca chuatsi]
Length = 118
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 36 LVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 71
++ ++++F + KA+ LN+RWFGGR V AE+
Sbjct: 83 IIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEV 118
>gi|348575588|ref|XP_003473570.1| PREDICTED: splicing factor 45 [Cavia porcellus]
Length = 386
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 314 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 369
>gi|119606812|gb|EAW86406.1| RNA binding motif protein 17, isoform CRA_b [Homo sapiens]
Length = 127
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 15 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ECE KYG++ + + + G D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 55 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 110
>gi|147898592|ref|NP_001083090.1| HIV Tat-specific factor 1 [Xenopus laevis]
gi|54038341|gb|AAH84628.1| LOC398736 protein [Xenopus laevis]
Length = 452
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 10 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 69
ED+ ECE K+G+++++ + D H G + F+ + + + LN RWFGGR +
Sbjct: 294 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEANEGDLCIQALNGRWFGGRQLAV 349
Query: 70 E-LSPVTDFR 78
E VTD++
Sbjct: 350 EPWDGVTDYQ 359
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,044,319,984
Number of Sequences: 23463169
Number of extensions: 81864370
Number of successful extensions: 211540
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 707
Number of HSP's that attempted gapping in prelim test: 207788
Number of HSP's gapped (non-prelim): 3911
length of query: 130
length of database: 8,064,228,071
effective HSP length: 96
effective length of query: 34
effective length of database: 10,106,731,143
effective search space: 343628858862
effective search space used: 343628858862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)