Your job contains 1 sequence.
>psy17809
MELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAEQLGLGLSQGHGLASPGSANSEEGS
GMNTGTANPDVSSLMSLSSSSSYKGCDRSFCIRMKSTLTKRGCHFKSSGYRSLDGFAFAL
GSDGRFLYISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNA
DEQNIICVNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRN
SGDSRNHDHLSPPDIEDGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSALTK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17809
(294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262139 - symbol:trh "trachealess" species:7227 "D... 347 5.5e-55 3
UNIPROTKB|F8VS42 - symbol:NPAS3 "Neuronal PAS domain-cont... 240 4.6e-39 3
UNIPROTKB|F7HC48 - symbol:NPAS3 "Uncharacterized protein"... 237 6.7e-39 3
UNIPROTKB|F6VP83 - symbol:NPAS3 "Uncharacterized protein"... 237 9.9e-39 3
UNIPROTKB|Q8IXF0 - symbol:NPAS3 "Neuronal PAS domain-cont... 237 1.1e-38 3
UNIPROTKB|F8VR32 - symbol:NPAS3 "Neuronal PAS domain-cont... 237 1.1e-38 3
MGI|MGI:1351610 - symbol:Npas3 "neuronal PAS domain prote... 234 4.5e-38 3
UNIPROTKB|F1NG48 - symbol:NPAS3 "Uncharacterized protein"... 232 1.7e-35 2
ZFIN|ZDB-GENE-060503-934 - symbol:npas3b "neuronal PAS do... 193 5.4e-30 3
UNIPROTKB|E1B815 - symbol:NPAS1 "Uncharacterized protein"... 180 1.4e-28 3
UNIPROTKB|J9P6G5 - symbol:NPAS1 "Uncharacterized protein"... 178 6.2e-28 3
UNIPROTKB|F1RM06 - symbol:NPAS1 "Uncharacterized protein"... 175 3.2e-27 3
UNIPROTKB|F6ZT88 - symbol:NPAS3 "Uncharacterized protein"... 235 4.0e-27 2
MGI|MGI:109205 - symbol:Npas1 "neuronal PAS domain protei... 179 1.2e-26 3
UNIPROTKB|Q99742 - symbol:NPAS1 "Neuronal PAS domain-cont... 174 6.2e-26 3
RGD|1310040 - symbol:Npas1 "neuronal PAS domain protein 1... 177 1.8e-25 3
UNIPROTKB|F1SHH0 - symbol:LOC100739785 "Uncharacterized p... 240 4.0e-25 2
UNIPROTKB|F1PI90 - symbol:NPAS3 "Uncharacterized protein"... 217 1.3e-22 2
UNIPROTKB|F1MB19 - symbol:NPAS3 "Uncharacterized protein"... 239 3.4e-19 1
RGD|1307181 - symbol:Npas3 "neuronal PAS domain protein 3... 234 1.1e-18 1
ZFIN|ZDB-GENE-080917-55 - symbol:hif1aa "hypoxia-inducibl... 160 3.8e-17 5
UNIPROTKB|J9NTF3 - symbol:NPAS3 "Uncharacterized protein"... 217 9.2e-17 1
ZFIN|ZDB-GENE-041210-5 - symbol:sim1b "single-minded homo... 158 1.5e-16 3
ZFIN|ZDB-GENE-010803-1 - symbol:sim2 "single-minded homol... 157 3.5e-16 3
UNIPROTKB|I3LA51 - symbol:SIM2 "Uncharacterized protein" ... 155 1.4e-15 2
UNIPROTKB|F1N178 - symbol:SIM1 "Uncharacterized protein" ... 144 2.6e-15 4
ZFIN|ZDB-GENE-030131-4490 - symbol:epas1a "endothelial PA... 165 4.3e-15 3
UNIPROTKB|E1BSJ1 - symbol:SIM2 "Uncharacterized protein" ... 146 5.3e-15 2
UNIPROTKB|A0JND0 - symbol:HIF1A "Hypoxia-inducible factor... 158 7.0e-15 4
UNIPROTKB|Q9XTA5 - symbol:HIF1A "Hypoxia-inducible factor... 158 7.0e-15 4
UNIPROTKB|Q0PGG7 - symbol:HIF1A "Hypoxia-inducible factor... 158 7.0e-15 4
UNIPROTKB|Q52RL7 - symbol:Q52RL7 "Hypoxia inducible facto... 158 7.0e-15 4
UNIPROTKB|F1RM22 - symbol:HIF3A "Uncharacterized protein"... 164 7.3e-15 3
UNIPROTKB|F1LT63 - symbol:Hif1a "Hypoxia-inducible factor... 161 8.7e-15 3
UNIPROTKB|D4A8P8 - symbol:Hif1a "Hypoxia-inducible factor... 161 8.7e-15 3
UNIPROTKB|F1NJK2 - symbol:HIF1A "Hypoxia-inducible factor... 160 9.0e-15 3
UNIPROTKB|F1NQK5 - symbol:HIF1A "Hypoxia-inducible factor... 160 9.1e-15 3
UNIPROTKB|Q9YIB9 - symbol:HIF1A "Hypoxia-inducible factor... 160 9.1e-15 3
MGI|MGI:106918 - symbol:Hif1a "hypoxia inducible factor 1... 161 9.1e-15 3
UNIPROTKB|E1C5G3 - symbol:SIM1 "Uncharacterized protein" ... 143 9.3e-15 4
UNIPROTKB|H7BZX8 - symbol:SIM2 "Single-minded homolog 2" ... 145 1.1e-14 2
UNIPROTKB|F8W9L0 - symbol:HIF1A "Hypoxia-inducible factor... 159 1.2e-14 3
UNIPROTKB|A7Z028 - symbol:HIF3A "HIF3A protein" species:9... 167 1.4e-14 3
UNIPROTKB|Q309Z6 - symbol:HIF1A "Hypoxia-inducible factor... 159 1.6e-14 3
UNIPROTKB|Q7YSE5 - symbol:Q7YSE5 "Hypoxia inducible facto... 159 1.6e-14 3
UNIPROTKB|F1PZ54 - symbol:HIF1A "Uncharacterized protein"... 159 1.6e-14 3
UNIPROTKB|F1SRU5 - symbol:HIF1A "Uncharacterized protein"... 159 1.6e-14 3
UNIPROTKB|Q6H8T3 - symbol:hif-1a "Hypoxia inducible facto... 159 1.6e-14 3
UNIPROTKB|Q16665 - symbol:HIF1A "Hypoxia-inducible factor... 159 1.6e-14 3
UNIPROTKB|A8MYV6 - symbol:HIF1A "Hypoxia-inducible factor... 159 1.7e-14 3
UNIPROTKB|Q4ZH58 - symbol:Q4ZH58 "Hypoxia-inducible facto... 159 1.7e-14 3
UNIPROTKB|Q64F54 - symbol:Q64F54 "Hypoxia-inducible facto... 158 2.2e-14 3
ZFIN|ZDB-GENE-020829-1 - symbol:sim1a "single-minded homo... 149 2.7e-14 2
UNIPROTKB|E1BJ63 - symbol:E1BJ63 "Uncharacterized protein... 146 2.9e-14 3
MGI|MGI:98307 - symbol:Sim2 "single-minded homolog 2 (Dro... 145 2.9e-14 2
UNIPROTKB|Q14190 - symbol:SIM2 "Single-minded homolog 2" ... 145 3.0e-14 2
UNIPROTKB|F1MKK8 - symbol:LOC782260 "Uncharacterized prot... 146 3.3e-14 3
UNIPROTKB|H0YDZ5 - symbol:HIF3A "Hypoxia-inducible factor... 156 3.6e-14 3
RGD|1308016 - symbol:Sim2 "single-minded homolog 2 (Droso... 144 3.8e-14 2
RGD|61928 - symbol:Hif1a "hypoxia-inducible factor 1, alp... 156 4.1e-14 3
UNIPROTKB|O35800 - symbol:Hif1a "Hypoxia-inducible factor... 156 4.1e-14 3
UNIPROTKB|E2RDR2 - symbol:SIM2 "Uncharacterized protein" ... 142 4.3e-14 2
UNIPROTKB|E9PB04 - symbol:HIF3A "Hypoxia-inducible factor... 156 5.0e-14 3
UNIPROTKB|Q9Y2N7 - symbol:HIF3A "Hypoxia-inducible factor... 156 7.2e-14 3
ZFIN|ZDB-GENE-060607-11 - symbol:epas1b "endothelial PAS ... 154 8.1e-14 3
MGI|MGI:98306 - symbol:Sim1 "single-minded homolog 1 (Dro... 146 8.7e-14 2
UNIPROTKB|F5H884 - symbol:HIF3A "Hypoxia-inducible factor... 156 1.0e-13 3
RGD|1309949 - symbol:Sim1 "single-minded homolog 1 (Droso... 145 1.1e-13 2
UNIPROTKB|E2QWV9 - symbol:SIM1 "Uncharacterized protein" ... 145 1.1e-13 2
UNIPROTKB|P81133 - symbol:SIM1 "Single-minded homolog 1" ... 145 1.1e-13 2
FB|FBgn0004666 - symbol:sim "single-minded" species:7227 ... 156 1.4e-13 2
UNIPROTKB|Q4R658 - symbol:Q4R658 "Testis cDNA, clone: Qts... 157 1.6e-13 3
UNIPROTKB|F1RYR5 - symbol:SIM1 "Uncharacterized protein" ... 127 1.1e-12 4
UNIPROTKB|F1NG41 - symbol:EPAS1 "Uncharacterized protein"... 147 1.1e-12 3
UNIPROTKB|A5PJT1 - symbol:EPAS1 "Uncharacterized protein"... 137 2.1e-12 4
ZFIN|ZDB-GENE-040426-1315 - symbol:hif1al "hypoxia-induci... 153 2.9e-12 3
UNIPROTKB|Q9I8A9 - symbol:hif1a "Hypoxia-inducible factor... 155 4.8e-12 2
ZFIN|ZDB-GENE-040426-706 - symbol:hif1ab "hypoxia-inducib... 143 5.2e-12 3
MGI|MGI:109169 - symbol:Epas1 "endothelial PAS domain pro... 137 6.7e-12 4
UNIPROTKB|E2QUK0 - symbol:EPAS1 "Uncharacterized protein"... 137 8.2e-12 4
RGD|68404 - symbol:Epas1 "endothelial PAS domain protein ... 139 9.9e-12 3
UNIPROTKB|Q9JHS1 - symbol:Epas1 "Endothelial PAS domain-c... 139 9.9e-12 3
UNIPROTKB|F1S5K9 - symbol:EPAS1 "Uncharacterized protein"... 137 2.1e-11 3
UNIPROTKB|Q99814 - symbol:EPAS1 "Endothelial PAS domain-c... 137 2.2e-11 3
RGD|70332 - symbol:Hif3a "hypoxia inducible factor 3, alp... 137 4.0e-11 3
UNIPROTKB|Q9JHS2 - symbol:Hif3a "Hypoxia-inducible factor... 137 4.0e-11 3
MGI|MGI:1859778 - symbol:Hif3a "hypoxia inducible factor ... 134 5.9e-11 3
UNIPROTKB|B4DR69 - symbol:NPAS1 "cDNA FLJ51724, highly si... 160 2.3e-10 1
UNIPROTKB|F1NQK6 - symbol:HIF1A "Hypoxia-inducible factor... 160 3.5e-09 2
UNIPROTKB|H0YHB6 - symbol:NPAS3 "Neuronal PAS domain-cont... 136 7.4e-09 1
UNIPROTKB|F8W0C2 - symbol:NPAS3 "Neuronal PAS domain-cont... 132 2.1e-08 1
ZFIN|ZDB-GENE-050211-2 - symbol:hif1al2 "hypoxia-inducibl... 142 6.7e-08 2
WB|WBGene00001851 - symbol:hif-1 species:6239 "Caenorhabd... 111 1.1e-07 2
UNIPROTKB|G5EGD2 - symbol:hif-1 "Hypoxia-inducible factor... 111 1.1e-07 2
FB|FBgn0015542 - symbol:sima "similar" species:7227 "Dros... 126 1.9e-07 3
UNIPROTKB|H0YI42 - symbol:NPAS3 "Neuronal PAS domain-cont... 103 3.5e-05 1
>FB|FBgn0262139 [details] [associations]
symbol:trh "trachealess" species:7227 "Drosophila
melanogaster" [GO:0072175 "epithelial tube formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA;TAS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP;TAS] [GO:0007431 "salivary gland
development" evidence=NAS;IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0035277
"spiracle morphogenesis, open tracheal system" evidence=IMP]
[GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;TAS;IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0007425 "epithelial cell fate determination, open tracheal
system" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP;TAS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 EMBL:AE014296 GO:GO:0007435 GO:GO:0043565
GO:GO:0035277 GO:GO:0048813 GO:GO:0004871 GO:GO:0000981
GO:GO:0046982 SMART:SM00086 GO:GO:0046331 SUPFAM:SSF47459
GO:GO:0007425 GO:GO:0007443 eggNOG:NOG287666 KO:K09098
GO:GO:0072175 CTD:7200 EMBL:U33427 EMBL:U42699 EMBL:BT031114
EMBL:AY094911 RefSeq:NP_001036575.1 RefSeq:NP_001097461.2
RefSeq:NP_523872.2 UniGene:Dm.7330 ProteinModelPortal:Q24119
SMR:Q24119 STRING:Q24119 GeneID:38065 KEGG:dme:Dmel_CG42865
FlyBase:FBgn0262139 InParanoid:Q24119 OMA:PNASESH OrthoDB:EOG4JWSVB
GenomeRNAi:38065 NextBio:806807 Bgee:Q24119 GermOnline:CG6883
Uniprot:Q24119
Length = 1022
Score = 347 (127.2 bits), Expect = 5.5e-55, Sum P(3) = 5.5e-55
Identities = 74/133 (55%), Positives = 89/133 (66%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S +I KGQVLT YYRLMNK+GGYTW+Q+CATVVCS+KNADEQNIICVNYVIS RE EN
Sbjct: 453 SHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVISNRENEN 512
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGT 259
I+DCCQLE +K EE ND + SP D SG+ +H LS D++ +
Sbjct: 513 MILDCCQLEP--SPDSIKHEEGLGNDKSSGSPGGDA-----SGEGNSH--LSAGDMKLNS 563
Query: 260 SEGDNSG-DQRGR 271
+ D+ G RGR
Sbjct: 564 PKTDSEGHSHRGR 576
Score = 216 (81.1 bits), Expect = 5.5e-55, Sum P(3) = 5.5e-55
Identities = 42/66 (63%), Positives = 47/66 (71%)
Query: 49 ASPGSANSEEGSGMNTGTANPDVXXXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSS 108
ASP S S++GSG + GT NPDV YKG DRSFC+RMKSTLTKRGCHFKSS
Sbjct: 266 ASPTSGASDDGSGTH-GTNNPDVAASMTQASTSGYKGYDRSFCVRMKSTLTKRGCHFKSS 324
Query: 109 GYRSLD 114
GYR+ D
Sbjct: 325 GYRASD 330
Score = 131 (51.2 bits), Expect = 4.1e-46, Sum P(3) = 4.1e-46
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGFA A+ +DGRFLYISETVSIYLGLSQ
Sbjct: 183 QSLDGFALAVAADGRFLYISETVSIYLGLSQ 213
Score = 126 (49.4 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANP 69
QVEMTGSS+FDYIHQADH+E+A+ S++ G G G A+P
Sbjct: 213 QVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGMASP 268
Score = 68 (29.0 bits), Expect = 5.5e-55, Sum P(3) = 5.5e-55
Identities = 12/14 (85%), Positives = 14/14 (100%)
Query: 1 MELFEQHQGTHILQ 14
++LFEQHQGTHILQ
Sbjct: 170 VDLFEQHQGTHILQ 183
>UNIPROTKB|F8VS42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021732 ProteinModelPortal:F8VS42 SMR:F8VS42
Ensembl:ENST00000551634 ArrayExpress:F8VS42 Bgee:F8VS42
Uniprot:F8VS42
Length = 906
Score = 240 (89.5 bits), Expect = 4.6e-39, Sum P(3) = 4.6e-39
Identities = 57/153 (37%), Positives = 86/153 (56%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 358 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 417
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNS-GDSRNHDHLSPPDIEDG 258
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 418 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTS-EDNENSKSDEKGNQSENSEDPEPD 473
Query: 259 TSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 474 RKKSGNACD----NDMNCNDDGHSSSNPDSRDS 502
Score = 188 (71.2 bits), Expect = 4.6e-39, Sum P(3) = 4.6e-39
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 163 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 222
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 223 ESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 261
Score = 132 (51.5 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 126 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 163
Score = 51 (23.0 bits), Expect = 4.6e-39, Sum P(3) = 4.6e-39
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 120 IEVFEAHLGSHILQ 133
Score = 46 (21.3 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D +P EDG
Sbjct: 489 DDGHSSSNPDSRDSDDSFEHSDFENPKAGEDG 520
>UNIPROTKB|F7HC48 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:ACFV01030586
EMBL:ACFV01030587 EMBL:ACFV01030588 EMBL:ACFV01030589
EMBL:ACFV01030590 EMBL:ACFV01030591 EMBL:ACFV01030592
EMBL:ACFV01030593 EMBL:ACFV01030594 EMBL:ACFV01030595
EMBL:ACFV01030596 EMBL:ACFV01030597 EMBL:ACFV01030598
EMBL:ACFV01030599 EMBL:ACFV01030600 EMBL:ACFV01030601
EMBL:ACFV01030602 EMBL:ACFV01030603 EMBL:ACFV01030604
EMBL:ACFV01030605 EMBL:ACFV01030606 EMBL:ACFV01030607
EMBL:ACFV01030608 EMBL:ACFV01030609 EMBL:ACFV01030610
EMBL:ACFV01030611 EMBL:ACFV01030612 EMBL:ACFV01030613
Ensembl:ENSCJAT00000010549 Uniprot:F7HC48
Length = 932
Score = 237 (88.5 bits), Expect = 6.7e-39, Sum P(3) = 6.7e-39
Identities = 57/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 381 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 440
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 441 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 497
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 498 PDRKKSGNACD----NDMNCNDDGHSSSNPDSRDS 528
Score = 190 (71.9 bits), Expect = 6.7e-39, Sum P(3) = 6.7e-39
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 186 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 245
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 246 ESTSPSLLTTDNALERSFFIRMKSTLTKRGVHIKSSGYK 284
Score = 132 (51.5 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 149 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 186
Score = 51 (23.0 bits), Expect = 6.7e-39, Sum P(3) = 6.7e-39
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 143 IEVFEAHLGSHILQ 156
Score = 46 (21.3 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D +P EDG
Sbjct: 515 DDGHSSSNPDSRDSDDSFEHSDFENPKAGEDG 546
Score = 45 (20.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 24/78 (30%), Positives = 29/78 (37%)
Query: 216 VKRE--EPSNNDPENDSP----DADREDGRNSGDSRNHDHLSPPDIEDGTSEGDNSGDQR 269
+K E EP N D NDS +RE RN + PP E S G
Sbjct: 648 IKTEISEPINFD--NDSSIWNYPPNREISRNESP---YSMTKPPSSEHFPSPQGGGGGGG 702
Query: 270 GRNHLDHVTQLHNISTPP 287
G HV ++ TPP
Sbjct: 703 GSGGGLHVAIPDSVLTPP 720
>UNIPROTKB|F6VP83 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0042711 OMA:FENPKAA
Ensembl:ENSMMUT00000020820 Uniprot:F6VP83
Length = 913
Score = 237 (88.5 bits), Expect = 9.9e-39, Sum P(3) = 9.9e-39
Identities = 57/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 365 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 424
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 425 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 481
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 482 PDRKKSGNACD----NDMNCNDDGHSSSNPDSRDS 512
Score = 188 (71.2 bits), Expect = 9.9e-39, Sum P(3) = 9.9e-39
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 170 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 229
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 230 ESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 268
Score = 132 (51.5 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 133 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 170
Score = 51 (23.0 bits), Expect = 9.9e-39, Sum P(3) = 9.9e-39
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 127 IEVFEAHLGSHILQ 140
Score = 46 (21.3 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D +P EDG
Sbjct: 499 DDGHSSSNPDSRDSDDSFEHSDFENPKAGEDG 530
>UNIPROTKB|Q8IXF0 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459 GO:GO:0042711
eggNOG:NOG287666 KO:K09098 EMBL:AB055962 EMBL:AB054575
EMBL:AB054576 EMBL:AF164438 EMBL:AY157302 EMBL:AY157303
EMBL:AL079281 IPI:IPI00217513 IPI:IPI00394963 IPI:IPI00394964
IPI:IPI00394965 IPI:IPI00394966 IPI:IPI00394967
RefSeq:NP_001158221.1 RefSeq:NP_001159365.1 RefSeq:NP_071406.1
RefSeq:NP_775182.1 UniGene:Hs.657892 UniGene:Hs.675437
UniGene:Hs.675475 ProteinModelPortal:Q8IXF0 SMR:Q8IXF0
STRING:Q8IXF0 PhosphoSite:Q8IXF0 DMDM:38604888 PaxDb:Q8IXF0
PRIDE:Q8IXF0 DNASU:64067 Ensembl:ENST00000341321
Ensembl:ENST00000346562 Ensembl:ENST00000356141
Ensembl:ENST00000357798 Ensembl:ENST00000547068
Ensembl:ENST00000548645 GeneID:64067 KEGG:hsa:64067 UCSC:uc001wrs.3
UCSC:uc001wrt.3 UCSC:uc001wru.3 UCSC:uc001wrv.3 CTD:64067
GeneCards:GC14P033408 HGNC:HGNC:19311 HPA:HPA002892 MIM:609430
neXtProt:NX_Q8IXF0 PharmGKB:PA134968746 HOVERGEN:HBG052656
InParanoid:Q8IXF0 PhylomeDB:Q8IXF0 GenomeRNAi:64067 NextBio:65842
ArrayExpress:Q8IXF0 Bgee:Q8IXF0 CleanEx:HS_NPAS3
Genevestigator:Q8IXF0 GermOnline:ENSG00000151322 Uniprot:Q8IXF0
Length = 933
Score = 237 (88.5 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 57/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 381 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 440
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 441 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 497
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 498 PDRKKSGNACD----NDMNCNDDGHSSSNPDSRDS 528
Score = 188 (71.2 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 186 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 245
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 246 ESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 284
Score = 132 (51.5 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 149 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 186
Score = 51 (23.0 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 143 IEVFEAHLGSHILQ 156
Score = 46 (21.3 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D +P EDG
Sbjct: 515 DDGHSSSNPDSRDSDDSFEHSDFENPKAGEDG 546
>UNIPROTKB|F8VR32 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021176 ProteinModelPortal:F8VR32 SMR:F8VR32
Ensembl:ENST00000551492 OMA:FENPKAA ArrayExpress:F8VR32 Bgee:F8VR32
Uniprot:F8VR32
Length = 938
Score = 237 (88.5 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 57/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 386 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 445
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 446 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 502
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 503 PDRKKSGNACD----NDMNCNDDGHSSSNPDSRDS 533
Score = 188 (71.2 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 250
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 251 ESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 289
Score = 132 (51.5 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 154 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 191
Score = 51 (23.0 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 148 IEVFEAHLGSHILQ 161
Score = 46 (21.3 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D +P EDG
Sbjct: 520 DDGHSSSNPDSRDSDDSFEHSDFENPKAGEDG 551
>MGI|MGI:1351610 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007610 "behavior" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042711 "maternal behavior" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1351610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0007626 GO:GO:0006351
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GO:GO:0042711 eggNOG:NOG287666 OrthoDB:EOG4M0F1J HOVERGEN:HBG052656
EMBL:AF173871 EMBL:AF168769 IPI:IPI00137835 UniGene:Mm.247044
UniGene:Mm.466545 ProteinModelPortal:Q9QZQ0 SMR:Q9QZQ0
STRING:Q9QZQ0 PhosphoSite:Q9QZQ0 PRIDE:Q9QZQ0 UCSC:uc007nno.1
HOGENOM:HOG000113836 InParanoid:Q9QZQ0 CleanEx:MM_NPAS3
Genevestigator:Q9QZQ0 GermOnline:ENSMUSG00000021010 Uniprot:Q9QZQ0
Length = 925
Score = 234 (87.4 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 56/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 386 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 445
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 446 TPMDIAQLP-HLPEKASESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 502
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ ++ D N ++ H+ S P + +
Sbjct: 503 PDRKKSGSACD----NDMNCNDDGHSSSNPDSRDS 533
Score = 185 (70.2 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 41/99 (41%), Positives = 51/99 (51%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+ S ++ + P+
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 250
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 251 ETTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 289
Score = 132 (51.5 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 154 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 191
Score = 51 (23.0 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 148 IEVFEAHLGSHILQ 161
Score = 47 (21.6 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 228 NDSPDADREDGRNSGDSRNH-DHLSPPDIEDG 258
+D + D R+S DS H D P EDG
Sbjct: 520 DDGHSSSNPDSRDSDDSFEHSDFEHPKAAEDG 551
>UNIPROTKB|F1NG48 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0042711 "maternal behavior"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:AADN02003378
EMBL:AADN02003379 EMBL:AADN02003380 IPI:IPI00575845
Ensembl:ENSGALT00000016244 Uniprot:F1NG48
Length = 727
Score = 232 (86.7 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 52/132 (39%), Positives = 75/132 (56%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA E+NII VNY++S EY++
Sbjct: 196 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAVNAKNASEKNIIWVNYLLSNPEYKD 255
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD---REDGRNS-GDSRNHDHLSPPDI 255
MD QL ++ ++ + E S D E+DS D +D NS D + + + D
Sbjct: 256 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDNSGKAHDDNENSKSDEKGNQSENSEDP 312
Query: 256 EDGTSEGDNSGD 267
E + N D
Sbjct: 313 ESDRKKSGNQSD 324
Score = 188 (71.2 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDY+H DH E+AE S G+A S ++ + P+
Sbjct: 1 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 60
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 61 ESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK 99
Score = 53 (23.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 217 KREEPSNNDPENDSPDADREDGRNSGDSR---NHD--HLSPPDIEDGTSEGDNS 265
K +E N ++ P++DR+ N D+ N D S D D +NS
Sbjct: 298 KSDEKGNQSENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSRDSDDSFENS 351
Score = 46 (21.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 220 EPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGT 259
E + ND N S + D D +S ++ + ++ P+ GT
Sbjct: 326 EMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGT 365
>ZFIN|ZDB-GENE-060503-934 [details] [associations]
symbol:npas3b "neuronal PAS domain protein 3b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060503-934 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 EMBL:BX296539 IPI:IPI00612477
Ensembl:ENSDART00000101511 ArrayExpress:F1Q754 Bgee:F1Q754
Uniprot:F1Q754
Length = 770
Score = 193 (73.0 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 59/199 (29%), Positives = 92/199 (46%)
Query: 90 FCIRMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQ 149
F R+ L C + S Y L + F++ + ++ S ++ KGQ
Sbjct: 310 FVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHAEDLDTVRQ--SHEDLLRKGQ 367
Query: 150 VLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLED 209
V+T YYR + + GGY W+QSCATV + K E+N+I VNYV+S E + +D QL +
Sbjct: 368 VVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELADMPLDLLQLPE 427
Query: 210 YIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEGDNSGDQR 269
++ +R + S++ P + SP G SR+ L ++ S +S +
Sbjct: 428 SLR---AERLQASSS-PRDMSPKTQGSTGTQPLKSRSETDLKG---KEAFSHNTSSQSEN 480
Query: 270 GRNHLDHVTQLHNISTPPE 288
R L H T S PPE
Sbjct: 481 TRKRL-HQTDSE--SGPPE 496
Score = 173 (66.0 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 45/101 (44%), Positives = 51/101 (50%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXA---SPGSANSEEGSGMNTGTANPD 70
QVE+TGSSVFDYIH ADH E+AE S SA+S + GT P
Sbjct: 164 QVELTGSSVFDYIHPADHVEMAERLGIRPHLRAEAGCQTSHESASSSASTSSLAGTPEPA 223
Query: 71 VXXXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+R F IRMKSTLTKRG H KSSGY+
Sbjct: 224 PHSPCSPVRELS----ERGFFIRMKSTLTKRGLHVKSSGYK 260
Score = 125 (49.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H + +SLDGF F + +GRFLYISETVSIYLGLSQ
Sbjct: 127 HLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQ 164
Score = 51 (23.0 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
++FEQH G H+LQ
Sbjct: 122 DIFEQHLGAHLLQ 134
Score = 45 (20.9 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 217 KREEP-SNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEGDNSGDQRGRNH 273
+ + P +++D +DS + + +D R S N + E+G S+ N + G+ H
Sbjct: 507 REDSPCTSSDQASDS-EVEEDDERESEWDHNPSSKRVKN-EEGASKQGNGANGAGKIH 562
>UNIPROTKB|E1B815 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
Length = 587
Score = 180 (68.4 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDYIH DH+E+ E P +S S ++ A+ P++
Sbjct: 167 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIE 226
Query: 73 XXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+ +RSF IRMKSTLTKRG H K+SGY+
Sbjct: 227 ASPTEVSRSS-RVQERSFFIRMKSTLTKRGLHVKASGYK 264
Score = 179 (68.1 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 51/185 (27%), Positives = 83/185 (44%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + L S +F++ + I S +++KGQV+T
Sbjct: 304 RLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQ--SHLDLLDKGQVMT 361
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV S K+ E++++ V+YV+S E E +D QL +
Sbjct: 362 GYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGEQTPLDAFQLPASVA 421
Query: 213 QRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEGDN---SGDQR 269
+ EP +PE P ++ D P +E E ++ S D+
Sbjct: 422 REDASSPEPEPTEPE--PPVEGKQAAPPEEDEAPQPRGKPIKVEPAPGEKEDPEDSEDEE 479
Query: 270 GRNHL 274
HL
Sbjct: 480 PSGHL 484
Score = 128 (50.1 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 137 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 167
Score = 53 (23.7 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 125 EVFEQHLGGHILQ 137
Score = 39 (18.8 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 220 EPSNNDPENDSPDADREDGRNSGDSRNHDHLSP 252
+P + + ++ED +S D HL+P
Sbjct: 454 QPRGKPIKVEPAPGEKEDPEDSEDEEPSGHLAP 486
>UNIPROTKB|J9P6G5 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
Length = 594
Score = 178 (67.7 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
Identities = 40/98 (40%), Positives = 52/98 (53%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPDVXX 73
QVE+TGSSVFDYIH DH+E+ E P +S S ++ P++
Sbjct: 175 QVELTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVPSSSSSSSSSSLADTPEIEA 234
Query: 74 XXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+ +RSF IRMKSTLTKRG H K+SGY+
Sbjct: 235 SAAEAPPFS-RVQERSFFIRMKSTLTKRGLHVKASGYK 271
Score = 176 (67.0 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
Identities = 50/184 (27%), Positives = 83/184 (45%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + L S +F++ + I S +++KGQV+T
Sbjct: 311 RLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDAARIRQ--SHLDLLDKGQVMT 368
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV S K+ E++++ V+YV+S E +D QL +
Sbjct: 369 GYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGGQTPLDAFQLPASVA 428
Query: 213 QRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEG---DNSGDQR 269
+ EP +PE P ++ D +E G E ++SGD+
Sbjct: 429 CEDISSPEPEPTEPE--PPAEGKQAAPLDKDEAPRSRGKRIKVEPGPGEAKDPEDSGDEE 486
Query: 270 GRNH 273
+H
Sbjct: 487 PSSH 490
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 145 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 175
Score = 53 (23.7 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 133 EVFEQHLGGHILQ 145
>UNIPROTKB|F1RM06 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
Length = 598
Score = 175 (66.7 bits), Expect = 3.2e-27, Sum P(3) = 3.2e-27
Identities = 41/102 (40%), Positives = 53/102 (51%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTAN-PDVX 72
QVE+TGSSVFDYIH DH+E+ E P +S S ++ A+ P++
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTSGPPTPPSVPSSSSSSSSSSSFADTPEIV 233
Query: 73 XXXXXXXXXXYKGC---DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H K+SGY+
Sbjct: 234 SAPEASPTEMSPSSRVQERSFFIRMKSTLTKRGLHVKASGYK 275
Score = 173 (66.0 bits), Expect = 3.2e-27, Sum P(3) = 3.2e-27
Identities = 51/185 (27%), Positives = 84/185 (45%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + L S +F++ + I S +++KGQV+T
Sbjct: 315 RLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQ--SHLDLLDKGQVMT 372
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV S K+ E++++ V+YV+S E +D QL +
Sbjct: 373 GYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEAGETPLDAFQLPASLA 432
Query: 213 QRGVKREEPSNNDPE---NDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEGDNSGDQR 269
EP +PE A RE+ + R P ++ + ++SGD+
Sbjct: 433 CEDASSPEPEPTEPEPPVEGKQAAPREE-EEAPQPRGKAIKMEPSPQE-PEDREDSGDEE 490
Query: 270 GRNHL 274
HL
Sbjct: 491 PSGHL 495
Score = 128 (50.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 144 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 174
Score = 62 (26.9 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 208 EDYIQQRGVK-REEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPP 253
E+ Q RG + EPS +PE DRED SGD HL+PP
Sbjct: 461 EEAPQPRGKAIKMEPSPQEPE------DRED---SGDEEPSGHLAPP 498
Score = 54 (24.1 bits), Expect = 3.2e-27, Sum P(3) = 3.2e-27
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 132 EIFEQHLGGHILQ 144
>UNIPROTKB|F6ZT88 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112 SMART:SM00091
InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 Ensembl:ENSMODT00000022361 Uniprot:F6ZT88
Length = 726
Score = 235 (87.8 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 56/137 (40%), Positives = 80/137 (58%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 176 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 235
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD--ADREDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D A ED NS D + + + D E
Sbjct: 236 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDNSALPEDNENSKSDEKGNQSENSEDPE 292
Query: 257 -DGTSEGDNSGDQRGRN 272
D G S ++ N
Sbjct: 293 SDRKKSGHQSDNEMNCN 309
Score = 105 (42.0 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 50 SPGSANSEEGSGMNTGTAN-PDVXXXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSS 108
S G+A S ++ + P+ +RSF IRMKSTLTKRG H KSS
Sbjct: 17 SQGTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSS 76
Query: 109 GYR 111
GY+
Sbjct: 77 GYK 79
>MGI|MGI:109205 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007610
"behavior" evidence=IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109205
GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 CTD:4861
eggNOG:NOG287666 HOGENOM:HOG000236298 HOVERGEN:HBG052655 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J EMBL:U77967 IPI:IPI00125487
RefSeq:NP_032744.1 UniGene:Mm.145821 ProteinModelPortal:P97459
SMR:P97459 STRING:P97459 PRIDE:P97459 Ensembl:ENSMUST00000002053
GeneID:18142 KEGG:mmu:18142 InParanoid:P97459 NextBio:293392
Bgee:P97459 CleanEx:MM_NPAS1 Genevestigator:P97459
GermOnline:ENSMUSG00000001988 Uniprot:P97459
Length = 594
Score = 179 (68.1 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 39/98 (39%), Positives = 55/98 (56%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPDVXX 73
QVE+TGSSVFDYIH DH+E+ E +P S +S S ++ P++
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAASIGP-PTPPSVSSSSSSSSSSLVDTPEIEA 232
Query: 74 XXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
++ +RSF +RMKSTLTKRG + K+SGY+
Sbjct: 233 SPTEASPA-FRAQERSFFVRMKSTLTKRGLNVKASGYK 269
Score = 162 (62.1 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + + S +F++ + I S +++KGQV+T
Sbjct: 309 RLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQ--SHLDLLDKGQVVT 366
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV + K+ E +++ V++V+S E +D QL +
Sbjct: 367 GYYRWLQRAGGFVWLQSVATVAGNGKSTGEHHVLWVSHVLSNAEGSQTPLDAFQLPAIVS 426
Query: 213 QRGVKRE--EPSNNDPENDS----P-DADREDGRNSGDSRNHDHLSPPDIEDGTSEGD 263
Q R EP+ +P D P D D++ + R SP + G+
Sbjct: 427 QEEPSRPGPEPTEEEPPVDGKQAVPADQDKDKDPQARGKRIKVEASPKEARGSEDSGE 484
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 144 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 174
Score = 53 (23.7 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 132 EVFEQHLGGHILQ 144
>UNIPROTKB|Q99742 [details] [associations]
symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0007417 "central
nervous system development" evidence=TAS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
Length = 590
Score = 174 (66.3 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 41/98 (41%), Positives = 51/98 (52%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPDVXX 73
QVEMTGSSVFDYIH DH+E+ E P ++S S T P++
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADT--PEIEA 231
Query: 74 XXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMKSTLTKRG H K+SGY+
Sbjct: 232 SLTKVPPSSLVQ-ERSFFVRMKSTLTKRGLHVKASGYK 268
Score = 163 (62.4 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 53/187 (28%), Positives = 87/187 (46%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + L S +F++ + I S +++KGQV+T
Sbjct: 308 RLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQ--SHVDLLDKGQVMT 365
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV S K+ E +++ V++V+S E +D QL
Sbjct: 366 GYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQLP---- 421
Query: 213 QRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPPD---IEDGTSE---GDNSG 266
V EE S+ PE P+ E G+ + + N + +E G E ++SG
Sbjct: 422 -ASVACEEASSPGPEPTEPEPPTE-GKQAAPAENEAPQTQGKRIKVEPGPRETKGSEDSG 479
Query: 267 DQRGRNH 273
D+ +H
Sbjct: 480 DEDPSSH 486
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 144 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 174
Score = 53 (23.7 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 132 EVFEQHLGGHILQ 144
>RGD|1310040 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:1310040 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:CH473979 CTD:4861
KO:K09098 OMA:VYPHLQR OrthoDB:EOG4M0F1J IPI:IPI00373182
RefSeq:NP_001100949.1 UniGene:Rn.211375 Ensembl:ENSRNOT00000020855
GeneID:308387 KEGG:rno:308387 UCSC:RGD:1310040 NextBio:658741
Uniprot:D3ZJ66
Length = 595
Score = 177 (67.4 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPDVXX 73
QVE+TGSSVFDYIH DH+E+ E P +++ S ++ P++
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAATTGPPTPPSVSSTSSSSSSSSLVDTPEIEA 233
Query: 74 XXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
++ +RSF +RMKSTLTKRG + K+SGY+
Sbjct: 234 SPTEASPA-FRVQERSFFVRMKSTLTKRGLNVKASGYK 270
Score = 154 (59.3 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 93 RMKSTLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLT 152
R+ LT C + S + + S +F++ + I S +++KGQV+T
Sbjct: 310 RLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDVTRIRQ--SHLDLLDKGQVVT 367
Query: 153 HYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQ 212
YYR + + GG+ W+QS ATV + K+A E +++ V++V+S E +D QL +
Sbjct: 368 GYYRWLQRAGGFVWLQSVATVAGNGKSAGEHHVLWVSHVLSHAEGGQTPLDAFQLPAIVS 427
Query: 213 QRGVKREEPSNNDPE--NDSPDADRE 236
Q EE S+ PE + P +R+
Sbjct: 428 Q-----EESSSPGPEPTKEEPPVERK 448
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 144 QSLDGFVFALNQEGKFLYISETVSIYLGLSQ 174
Score = 53 (23.7 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 2 ELFEQHQGTHILQ 14
E+FEQH G HILQ
Sbjct: 132 EVFEQHLGGHILQ 144
>UNIPROTKB|F1SHH0 [details] [associations]
symbol:LOC100739785 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:CU467954
EMBL:CU468220 Ensembl:ENSSSCT00000002197 Uniprot:F1SHH0
Length = 650
Score = 240 (89.5 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 57/153 (37%), Positives = 86/153 (56%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 115 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 174
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNS-GDSRNHDHLSPPDIEDG 258
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 175 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTS-EDNENSKSDEKGNQSENSEDPEPD 230
Query: 259 TSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ N+ D N ++ H+ S P + +
Sbjct: 231 RKKSGNTCD----NDMNCNDDGHSSSNPDSRDS 259
Score = 79 (32.9 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 94 MKSTLTKRGCHFKSSGYR 111
MKSTLTKRG H KSSGY+
Sbjct: 1 MKSTLTKRGVHIKSSGYK 18
>UNIPROTKB|F1PI90 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0042711 "maternal behavior"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0007626 GO:GO:0004871 GO:GO:0035176
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0042711
EMBL:AAEX03005658 EMBL:AAEX03005657 Ensembl:ENSCAFT00000020917
Uniprot:F1PI90
Length = 657
Score = 217 (81.4 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 44/93 (47%), Positives = 63/93 (67%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 115 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 174
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD 232
MD QL ++ ++ + E S D E+DS D
Sbjct: 175 TPMDIAQLP-HLPEKTSESSETS--DSESDSKD 204
Score = 79 (32.9 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 94 MKSTLTKRGCHFKSSGYR 111
MKSTLTKRG H KSSGY+
Sbjct: 1 MKSTLTKRGVHIKSSGYK 18
>UNIPROTKB|F1MB19 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0042711 "maternal behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0007626 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0042711 OMA:FENPKAA EMBL:DAAA02052717 IPI:IPI00714021
Ensembl:ENSBTAT00000005853 Uniprot:F1MB19
Length = 651
Score = 239 (89.2 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 53/129 (41%), Positives = 77/129 (59%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 99 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 158
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNS-GDSRNHDHLSPPDIEDG 258
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 159 TPMDIAQLP-HLPEKTSESSETS--DSESDSKDTS-EDNENSKSDEKGNQSENSEDPEPD 214
Query: 259 TSEGDNSGD 267
+ N+ D
Sbjct: 215 RKKSGNTCD 223
>RGD|1307181 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10116
"Rattus norvegicus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0007626 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0042711 IPI:IPI00367100 Ensembl:ENSRNOT00000049945
Uniprot:F1M4F7
Length = 636
Score = 234 (87.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/155 (36%), Positives = 86/155 (55%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 97 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 156
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD--REDGRNS-GDSRNHDHLSPPDIE 256
MD QL ++ ++ + E S D E+DS D ED NS D + + + D E
Sbjct: 157 TPMDIAQLP-HLPEKASESSETS--DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPE 213
Query: 257 DGTSEGDNSGDQRGRNHLDHVTQLHNISTPPEQSA 291
+ ++ D N ++ H+ S P + +
Sbjct: 214 PDRKKSGSACD----NDMNCNDDGHSSSNPDSRDS 244
>ZFIN|ZDB-GENE-080917-55 [details] [associations]
symbol:hif1aa "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-080917-55 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:BX649520 IPI:IPI00506879
Ensembl:ENSDART00000044282 Bgee:F1QNB9 Uniprot:F1QNB9
Length = 760
Score = 160 (61.4 bits), Expect = 3.8e-17, Sum P(5) = 3.8e-17
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQ 206
KGQV T YRL+ K GG+ W ++ ATV+ +SKN+ Q ++CVNY++SG E I+ Q
Sbjct: 296 KGQVCTGQYRLLAKAGGFVWAETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQ 355
Query: 207 LEDY-IQQRGVKRE-EPSNNDPENDSPDADRED 237
I+Q + E E + + + + + D+ED
Sbjct: 356 TNSTKIKQEEHQEEVEVTMAELKEEEKEMDKED 388
Score = 80 (33.2 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 105 FKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+ S ++LDGF L +DG +Y+SE VS LGL Q
Sbjct: 87 WNGSFLKALDGFLLVLSADGDIVYLSENVSKCLGLPQ 123
Score = 76 (31.8 bits), Expect = 3.8e-17, Sum P(5) = 3.8e-17
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 14 QVEMTGSSVFDYIHQADHTELAE 36
Q+E+TG SVF++ H DH EL E
Sbjct: 123 QIELTGHSVFEFTHPCDHEELRE 145
Score = 60 (26.2 bits), Expect = 3.8e-17, Sum P(5) = 3.8e-17
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+RSF +RMK TLT RG + KS+ ++ L
Sbjct: 164 NRSFLLRMKCTLTSRGRTVNVKSASWKVL 192
Score = 41 (19.5 bits), Expect = 3.8e-17, Sum P(5) = 3.8e-17
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 123 DGRFLYISETVSIYLGLSQWQVINKGQVLTHYYRL 157
D RF Y E ++ LG V+ V +Y+ L
Sbjct: 248 DMRFTYCDERITELLGFDPEDVLQHS-VYEYYHAL 281
Score = 39 (18.8 bits), Expect = 3.8e-17, Sum P(5) = 3.8e-17
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 243 DSRNHDHLSPPDIEDGTSEGDNSGDQRGRNHLDH 276
DS D L P +E S S QR R + H
Sbjct: 508 DSELCDQLKPDHVEKHFSMDIESKTQRFRRYCMH 541
>UNIPROTKB|J9NTF3 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR013655
Pfam:PF08447 PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610
GO:GO:0006355 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AAEX03005658 EMBL:AAEX03005657
Ensembl:ENSCAFT00000046640 OMA:ESCISAR Uniprot:J9NTF3
Length = 707
Score = 217 (81.4 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 44/93 (47%), Positives = 63/93 (67%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S ++NKGQ +T YYR M KNGGY W+QS AT+ ++KNA+E+NII VNY++S EY++
Sbjct: 147 SHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKD 206
Query: 200 FIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD 232
MD QL ++ ++ + E S D E+DS D
Sbjct: 207 TPMDIAQLP-HLPEKTSESSETS--DSESDSKD 236
>ZFIN|ZDB-GENE-041210-5 [details] [associations]
symbol:sim1b "single-minded homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
NextBio:20888303 Uniprot:C1JIE2
Length = 586
Score = 158 (60.7 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + ++ KGQV T YYR ++K GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 282 SFHLRCAHHLLLVKGQVTTKYYRFLSKRGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 341
Query: 194 GREYENFIMDCCQL 207
EY+ I+ QL
Sbjct: 342 DTEYKGLILSLDQL 355
Score = 104 (41.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + +DG+ +YISET S++LGLSQ
Sbjct: 94 QTLDGFIFVVAADGKIMYISETASVHLGLSQ 124
Score = 86 (35.3 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTELA 35
H G + QVE+TG+S+++Y+H ADH E+A
Sbjct: 119 HLG--LSQVELTGNSIYEYVHPADHDEMA 145
Score = 61 (26.5 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR S GY+
Sbjct: 165 ERSFFLRMKCVLAKRNAGLTSGGYK 189
>ZFIN|ZDB-GENE-010803-1 [details] [associations]
symbol:sim2 "single-minded homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
NextBio:20796935 Uniprot:Q8UVV3
Length = 585
Score = 157 (60.3 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 136 YLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGR 195
+L + ++ KGQV T YYRL++K GG+ WVQSCAT+V +S+++ I+ VNYV++
Sbjct: 273 HLRFAHHLLLVKGQVTTRYYRLLSKRGGWVWVQSCATIVHNSRSSRPHCIVSVNYVLTDV 332
Query: 196 EY 197
EY
Sbjct: 333 EY 334
Score = 110 (43.8 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ LYISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKILYISETASVHLGLSQ 116
Score = 84 (34.6 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTELA 35
H G + QVE+TG+S+F+YIH +DH E++
Sbjct: 111 HLG--LSQVELTGNSIFEYIHPSDHDEMS 137
Score = 61 (26.5 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR S GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTSGGYK 181
>UNIPROTKB|I3LA51 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 OMA:KKPMLPA
EMBL:FP325296 Ensembl:ENSSSCT00000025022 Uniprot:I3LA51
Length = 614
Score = 155 (59.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQ 206
KGQV T YYRL++K GG+ WVQSCATVV +S+++ I+ VNYV++ EY+ + Q
Sbjct: 229 KGQVTTKYYRLLSKLGGWVWVQSCATVVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQ 288
Query: 207 L 207
+
Sbjct: 289 V 289
Score = 108 (43.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 28 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 58
Score = 80 (33.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 53 HLG--LSQVELTGNSIYEYIHPSDHDEM 78
Score = 60 (26.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 99 ERSFFLRMKCVLAKRNAGLTCSGYK 123
>UNIPROTKB|F1N178 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
Uniprot:F1N178
Length = 766
Score = 144 (55.7 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQL 207
EY+ + Q+
Sbjct: 334 DTEYKGLQLSLDQI 347
Score = 104 (41.7 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
Score = 52 (23.4 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 209 DYIQQRGVKREEPSNNDPENDSPDA-DREDGRNS 241
D+IQQR K P ND +N SP A R NS
Sbjct: 631 DHIQQREGKMLSPHENDYDN-SPTALSRISSPNS 663
>ZFIN|ZDB-GENE-030131-4490 [details] [associations]
symbol:epas1a "endothelial PAS domain protein 1a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-030131-4490 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CR931998 IPI:IPI00499388
Ensembl:ENSDART00000024415 ArrayExpress:E7FAJ1 Bgee:E7FAJ1
Uniprot:E7FAJ1
Length = 842
Score = 165 (63.1 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + NKGQV++ YR++ KNGGY WV++ ATV+ +++N+ Q IIC+NY++S E ++
Sbjct: 291 SHQNLCNKGQVVSGQYRMLAKNGGYVWVETQATVIYNNRNSQPQCIICINYILSSVEEQS 350
Query: 200 FIMDCCQLE 208
I Q E
Sbjct: 351 VIFSLDQTE 359
Score = 79 (32.9 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 79 (32.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SL+GF + SDG +++SE VS ++GL+Q
Sbjct: 93 KSLEGFVIVVTSDGDMIFLSENVSKFMGLTQ 123
Score = 51 (23.0 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
R F +RMK T+T RG + KS+ ++ L
Sbjct: 166 RDFFMRMKCTVTNRGRTVNLKSASWKVL 193
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G SV+++ H D + +
Sbjct: 270 ELLGRSVYEFCHALDSENMTK 290
>UNIPROTKB|E1BSJ1 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
"embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
Length = 419
Score = 146 (56.5 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQ 206
KGQV T YYRL++K GG+ WVQS AT+V +S+++ I+ VNYV++ EY+ + Q
Sbjct: 287 KGQVTTKYYRLLSKQGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQ 346
Query: 207 L 207
+
Sbjct: 347 V 347
Score = 108 (43.1 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 116
Score = 80 (33.2 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPSDHDEM 136
Score = 60 (26.2 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCSGYK 181
>UNIPROTKB|A0JND0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0061419
"positive regulation of transcription from RNA polymerase II
promoter in response to hypoxia" evidence=IEA] [GO:0061298 "retina
vasculature development in camera-type eye" evidence=IEA]
[GO:0061030 "epithelial cell differentiation involved in mammary
gland alveolus development" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0051541 "elastin metabolic
process" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
UniGene:Bt.4184 CTD:3091 KO:K08268 OMA:QNAQRKR GO:GO:0001922
GO:GO:0032963 GO:GO:0002248 GO:GO:0051541 GO:GO:0060574
GO:GO:2001054 GO:GO:0021502 GO:GO:0032909 GO:GO:0010573
EMBL:DAAA02029320 EMBL:BC126622 IPI:IPI00825226 RefSeq:NP_776764.2
SMR:A0JND0 STRING:A0JND0 Ensembl:ENSBTAT00000027885 GeneID:281814
KEGG:bta:281814 InParanoid:A0JND0 NextBio:20805726 Uniprot:A0JND0
Length = 823
Score = 158 (60.7 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY W+++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
Score = 37 (18.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 275 DHVTQLHNISTPPEQSALT 293
D ++ L N ST P QSA T
Sbjct: 578 DQLSPLENSSTSP-QSAST 595
>UNIPROTKB|Q9XTA5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:0019896 "axon transport of
mitochondrion" evidence=ISS] [GO:0071456 "cellular response to
hypoxia" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0071456 GO:GO:0003700 GO:GO:0006351
GO:GO:0044212 GO:GO:0004871 GO:GO:0019896 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:AB018398
IPI:IPI00689122 UniGene:Bt.4184 ProteinModelPortal:Q9XTA5
SMR:Q9XTA5 STRING:Q9XTA5 PRIDE:Q9XTA5 InParanoid:Q9XTA5
OrthoDB:EOG40CHGP Uniprot:Q9XTA5
Length = 823
Score = 158 (60.7 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY W+++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
Score = 37 (18.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 275 DHVTQLHNISTPPEQSALT 293
D ++ L N ST P QSA T
Sbjct: 578 DQLSPLENSSTSP-QSAST 595
>UNIPROTKB|Q0PGG7 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:30521 "Bos grunniens" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ838046
EMBL:AY621118 ProteinModelPortal:Q0PGG7 SMR:Q0PGG7 Uniprot:Q0PGG7
Length = 823
Score = 158 (60.7 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY W+++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKKGGYVWIETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
Score = 37 (18.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 275 DHVTQLHNISTPPEQSALT 293
D ++ L N ST P QSA T
Sbjct: 578 DQLSPLENSSTSP-QSAST 595
>UNIPROTKB|Q52RL7 [details] [associations]
symbol:Q52RL7 "Hypoxia inducible factor-1 alpha"
species:59538 "Pantholops hodgsonii" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY971808 ProteinModelPortal:Q52RL7
SMR:Q52RL7 Uniprot:Q52RL7
Length = 823
Score = 158 (60.7 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY W+++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
Score = 37 (18.1 bits), Expect = 7.0e-15, Sum P(4) = 7.0e-15
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 275 DHVTQLHNISTPPEQSALT 293
D ++ L N ST P QSA T
Sbjct: 578 DQLSPLENSSTSP-QSAST 595
>UNIPROTKB|F1RM22 [details] [associations]
symbol:HIF3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0005667 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
OMA:APILDGT EMBL:FP565329 Ensembl:ENSSSCT00000003440 Uniprot:F1RM22
Length = 670
Score = 164 (62.8 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 47/156 (30%), Positives = 74/156 (47%)
Query: 108 SGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWV 167
+GYR D +G + YI S +G S +++KGQ +T YR + ++GGY W
Sbjct: 263 AGYRPDD----LIGCSA-YEYIHALDSDAVGQSIHALLSKGQAVTGQYRFLARSGGYLWT 317
Query: 168 QSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPE 227
Q+ ATVV + ++I+CV+++IS E ++ Q E + +R ++R PS D
Sbjct: 318 QTQATVVSGGRGPQSESIVCVHFLISQVEETEVVLSLEQTERH-SRRPIQRGTPSQEDAP 376
Query: 228 NDSPDADREDGRNSGDSRNHDHLSPPDIEDGTSEGD 263
N D SG R L PP + + D
Sbjct: 377 NPGDSLD-----TSGP-RILAFLHPPTLSEAALAAD 406
Score = 68 (29.0 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 110 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 142
Score = 57 (25.1 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 87 DRSFCIRMKSTLTKRG 102
+R F +RMKSTLT RG
Sbjct: 160 ERCFSLRMKSTLTSRG 175
>UNIPROTKB|F1LT63 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:61928 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
IPI:IPI00339106 Ensembl:ENSRNOT00000012105 ArrayExpress:F1LT63
Uniprot:F1LT63
Length = 827
Score = 161 (61.7 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 273 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 332
Query: 194 GREYENFIMDCCQLEDYIQ 212
G + I Q E ++
Sbjct: 333 GIIQHDLIFSLQQTESVLK 351
Score = 75 (31.5 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 111 LTQFELTGHSVFDFTHPCDHEEMRE 135
Score = 57 (25.1 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 154 RSFFLRMKCTLTSRGRTMNIKSATWKVL 181
Score = 44 (20.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 258 ELLGRSIYEYYHALDSDHLTK 278
>UNIPROTKB|D4A8P8 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0002248 "connective tissue replacement involved in inflammatory
response wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005737
GO:GO:0021987 GO:GO:0005730 GO:GO:0035774 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0043565 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0071347
GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 GO:GO:0001892
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 IPI:IPI00557648
Ensembl:ENSRNOT00000049725 ArrayExpress:D4A8P8 Uniprot:D4A8P8
Length = 828
Score = 161 (61.7 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 285 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 344
Query: 194 GREYENFIMDCCQLEDYIQ 212
G + I Q E ++
Sbjct: 345 GIIQHDLIFSLQQTESVLK 363
Score = 75 (31.5 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 123 LTQFELTGHSVFDFTHPCDHEEMRE 147
Score = 57 (25.1 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 166 RSFFLRMKCTLTSRGRTMNIKSATWKVL 193
Score = 44 (20.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 270 ELLGRSIYEYYHALDSDHLTK 290
>UNIPROTKB|F1NJK2 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 IPI:IPI00597728
EMBL:AADN02003885 EMBL:AADN02003886 Ensembl:ENSGALT00000019364
ArrayExpress:F1NJK2 Uniprot:F1NJK2
Length = 810
Score = 160 (61.4 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 283 SDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLS 342
Query: 194 GREYENFIMDCCQLE 208
G ++ I Q E
Sbjct: 343 GIVQKDLIFSLGQTE 357
Score = 74 (31.1 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q ++TG SVFD+ H DH EL E
Sbjct: 122 LTQFDLTGHSVFDFTHPCDHEELRE 146
Score = 59 (25.8 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+RSF +RMK TLT RG + KS+ ++ L
Sbjct: 163 ERSFFLRMKCTLTSRGRTVNIKSATWKVL 191
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 268 ELLGRSIYEYYHALDSDHLTK 288
>UNIPROTKB|F1NQK5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0030154 GO:GO:0005730 GO:GO:0035774
GO:GO:0006110 GO:GO:0043565 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0005667 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0014850
GO:GO:0030949 GO:GO:0071347 GO:GO:0010634 GO:GO:0046886
GO:GO:0043619 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OMA:QNAQRKR GO:GO:0001922
GO:GO:0051541 GO:GO:2001054 GO:GO:0032909 EMBL:AADN02003885
EMBL:AADN02003886 IPI:IPI00822528 Ensembl:ENSGALT00000037380
ArrayExpress:F1NQK5 Uniprot:F1NQK5
Length = 811
Score = 160 (61.4 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLS 343
Query: 194 GREYENFIMDCCQLE 208
G ++ I Q E
Sbjct: 344 GIVQKDLIFSLGQTE 358
Score = 74 (31.1 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q ++TG SVFD+ H DH EL E
Sbjct: 122 LTQFDLTGHSVFDFTHPCDHEELRE 146
Score = 59 (25.8 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+RSF +RMK TLT RG + KS+ ++ L
Sbjct: 164 ERSFFLRMKCTLTSRGRTVNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|Q9YIB9 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 OrthoDB:EOG40CHGP EMBL:AB013746
IPI:IPI00597728 PIR:JC7619 RefSeq:NP_989628.1 UniGene:Gga.4933
ProteinModelPortal:Q9YIB9 SMR:Q9YIB9 STRING:Q9YIB9 PRIDE:Q9YIB9
GeneID:374177 KEGG:gga:374177 CTD:3091 KO:K08268 NextBio:20813683
Uniprot:Q9YIB9
Length = 811
Score = 160 (61.4 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLS 343
Query: 194 GREYENFIMDCCQLE 208
G ++ I Q E
Sbjct: 344 GIVQKDLIFSLGQTE 358
Score = 74 (31.1 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q ++TG SVFD+ H DH EL E
Sbjct: 122 LTQFDLTGHSVFDFTHPCDHEELRE 146
Score = 59 (25.8 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+RSF +RMK TLT RG + KS+ ++ L
Sbjct: 164 ERSFFLRMKCTLTSRGRTVNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>MGI|MGI:106918 [details] [associations]
symbol:Hif1a "hypoxia inducible factor 1, alpha subunit"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IPI] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IGI;ISO;IMP;IDA]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0001837
"epithelial to mesenchymal transition" evidence=IMP] [GO:0001892
"embryonic placenta development" evidence=IGI;IMP] [GO:0001922 "B-1
B cell homeostasis" evidence=IMP] [GO:0001944 "vasculature
development" evidence=IGI] [GO:0001947 "heart looping"
evidence=IMP] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IGI] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
evidence=IMP] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006089 "lactate metabolic process" evidence=IMP] [GO:0006110
"regulation of glycolysis" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IMP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007595
"lactation" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=ISO] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=ISO] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0014850 "response to muscle activity"
evidence=IMP] [GO:0019896 "axon transport of mitochondrion"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0021502
"neural fold elevation formation" evidence=IMP] [GO:0021987
"cerebral cortex development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI;IMP] [GO:0030502 "negative regulation
of bone mineralization" evidence=IMP] [GO:0030949 "positive
regulation of vascular endothelial growth factor receptor signaling
pathway" evidence=IMP] [GO:0031514 "motile cilium" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IMP] [GO:0032364 "oxygen homeostasis" evidence=ISO;IMP]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=ISO] [GO:0032963 "collagen metabolic process"
evidence=IMP] [GO:0034244 "negative regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO]
[GO:0035035 "histone acetyltransferase binding" evidence=ISO]
[GO:0035162 "embryonic hemopoiesis" evidence=IMP] [GO:0035774
"positive regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=IMP] [GO:0042127 "regulation
of cell proliferation" evidence=IMP] [GO:0042541 "hemoglobin
biosynthetic process" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IMP] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO;IMP] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=ISO;IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045906 "negative regulation of
vasoconstriction" evidence=ISO] [GO:0045926 "negative regulation of
growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IMP] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
morphogenesis" evidence=IMP] [GO:0048546 "digestive tract
morphogenesis" evidence=IMP] [GO:0048661 "positive regulation of
smooth muscle cell proliferation" evidence=ISO] [GO:0050790
"regulation of catalytic activity" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0051541 "elastin
metabolic process" evidence=IMP] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IMP] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IMP] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IMP] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IGI;IMP] [GO:2001054 "negative regulation of mesenchymal
cell apoptotic process" evidence=IMP] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=IPI] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:106918 GO:GO:0005634
GO:GO:0005737 GO:GO:0021987 GO:GO:0005730 GO:GO:0035774
GO:GO:0032869 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0009749 GO:GO:0043565 GO:GO:0048661 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0014850 GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0035035 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 eggNOG:NOG289264 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP CTD:3091 KO:K08268 OMA:QNAQRKR ChiTaRS:HIF1A
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0032909
GO:GO:0010573 EMBL:U59496 EMBL:AF003695 EMBL:Y09085 EMBL:Y13656
EMBL:AF004155 EMBL:AF004141 EMBL:AF004142 EMBL:AF004143
EMBL:AF004144 EMBL:AF004145 EMBL:AF004146 EMBL:AF004147
EMBL:AF004148 EMBL:AF004149 EMBL:AF004150 EMBL:AF004151
EMBL:AF004152 EMBL:AF004153 EMBL:AF004154 EMBL:AK034087
EMBL:AK076395 EMBL:AK033471 EMBL:AK017853 EMBL:BC026139 EMBL:X95580
EMBL:X95002 IPI:IPI00336700 IPI:IPI00406683 PIR:JC4837
RefSeq:NP_034561.2 UniGene:Mm.3879 UniGene:Mm.397466
UniGene:Mm.446610 ProteinModelPortal:Q61221 SMR:Q61221
IntAct:Q61221 MINT:MINT-1179248 STRING:Q61221 PhosphoSite:Q61221
PRIDE:Q61221 Ensembl:ENSMUST00000021530 Ensembl:ENSMUST00000110461
Ensembl:ENSMUST00000110464 GeneID:15251 KEGG:mmu:15251
UCSC:uc007nwo.2 UCSC:uc007nwq.2 InParanoid:Q61221 BindingDB:Q61221
ChEMBL:CHEMBL6046 NextBio:287865 Bgee:Q61221 CleanEx:MM_HIF1A
Genevestigator:Q61221 GermOnline:ENSMUSG00000021109 Uniprot:Q61221
Length = 836
Score = 161 (61.7 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLEDYIQ 212
G + I Q E ++
Sbjct: 344 GIIQHDLIFSLQQTESVLK 362
Score = 75 (31.5 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|E1C5G3 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
Length = 766
Score = 143 (55.4 bits), Expect = 9.3e-15, Sum P(4) = 9.3e-15
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQL 207
EY+ + Q+
Sbjct: 334 DTEYKGLQLSLDQV 347
Score = 104 (41.7 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 9.3e-15, Sum P(4) = 9.3e-15
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 9.3e-15, Sum P(4) = 9.3e-15
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
Score = 48 (22.0 bits), Expect = 9.3e-15, Sum P(4) = 9.3e-15
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 209 DYIQQRGVKREEPSNNDPENDSPDADREDGRNS 241
++IQQR K P ND +N R NS
Sbjct: 631 EHIQQRDGKIMSPHENDYDNSPTTLSRISSPNS 663
>UNIPROTKB|H7BZX8 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 EMBL:AP000697 EMBL:AP000698 HGNC:HGNC:10883
ProteinModelPortal:H7BZX8 Ensembl:ENST00000431229 Uniprot:H7BZX8
Length = 480
Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYE 198
KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++ EY+
Sbjct: 225 KGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYK 276
Score = 108 (43.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 24 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 54
Score = 80 (33.2 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 49 HLG--LSQVELTGNSIYEYIHPSDHDEM 74
Score = 60 (26.2 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 95 ERSFFLRMKCVLAKRNAGLTCSGYK 119
>UNIPROTKB|F8W9L0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0002248
"connective tissue replacement involved in inflammatory response
wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0006089 "lactate metabolic
process" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006879 "cellular iron ion homeostasis"
evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=IEA] [GO:0014850 "response to
muscle activity" evidence=IEA] [GO:0021502 "neural fold elevation
formation" evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0030949 "positive regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=IEA] [GO:0032007 "negative regulation of TOR signaling
cascade" evidence=IEA] [GO:0032364 "oxygen homeostasis"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045926 "negative regulation of growth" evidence=IEA]
[GO:0046716 "muscle cell homeostasis" evidence=IEA] [GO:0048546
"digestive tract morphogenesis" evidence=IEA] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0051541 "elastin
metabolic process" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987
GO:GO:0005730 GO:GO:0035774 GO:GO:0032869 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0009749 GO:GO:0043565
GO:GO:0001666 GO:GO:0048661 GO:GO:0008542 GO:GO:0043524
GO:GO:0050790 GO:GO:0001525 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0001077 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0045648 GO:GO:0061298
GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0003151
GO:GO:0007595 GO:GO:0010634 GO:GO:0001892 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0032364
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 EMBL:AL137129 HGNC:HGNC:4910
ChiTaRS:HIF1A GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
ProteinModelPortal:F8W9L0 SMR:F8W9L0 Ensembl:ENST00000557538
ArrayExpress:F8W9L0 Bgee:F8W9L0 Uniprot:F8W9L0
Length = 767
Score = 159 (61.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 225 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 284
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 285 GIIQHDLIFSLQQTE 299
Score = 75 (31.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 63 LTQFELTGHSVFDFTHPCDHEEMRE 87
Score = 57 (25.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 106 RSFFLRMKCTLTSRGRTMNIKSATWKVL 133
Score = 44 (20.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 210 ELLGRSIYEYYHALDSDHLTK 230
>UNIPROTKB|A7Z028 [details] [associations]
symbol:HIF3A "HIF3A protein" species:9913 "Bos taurus"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0001666 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 GeneTree:ENSGT00650000093281 CTD:64344
eggNOG:NOG288942 KO:K09096 OrthoDB:EOG4BVRT7 EMBL:DAAA02047392
EMBL:BC153226 IPI:IPI00695039 RefSeq:NP_001098812.1
UniGene:Bt.43927 Ensembl:ENSBTAT00000025217 GeneID:507699
KEGG:bta:507699 InParanoid:A7Z028 OMA:APILDGT NextBio:20868183
Uniprot:A7Z028
Length = 669
Score = 167 (63.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 46/136 (33%), Positives = 69/136 (50%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S +G S +++KGQ +T YR + ++GGY W Q+ ATVV + ++I+C
Sbjct: 277 YIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC 336
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNH 247
V+++IS E ++ Q E + +R V+R PS D N P DR D SG R
Sbjct: 337 VHFLISRVEETEVVLSLEQTERH-SRRHVQRGSPSQKDAPN--P-GDRLD--TSGP-RIL 389
Query: 248 DHLSPPDIEDGTSEGD 263
L PP + + D
Sbjct: 390 AFLHPPALSEAALAAD 405
Score = 65 (27.9 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G ++FD+IH D EL +
Sbjct: 111 ENVSKHLG--LSQLELIGHNIFDFIHPCDQEELQD 143
Score = 53 (23.7 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 87 DRSFCIRMKSTLTKRG 102
+R F +RMKSTL+ RG
Sbjct: 161 ERCFSLRMKSTLSSRG 176
Score = 40 (19.1 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 268 DLIGCSAYEYIHALD 282
>UNIPROTKB|Q309Z6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:146132 "Eospalax baileyi" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ229099
ProteinModelPortal:Q309Z6 SMR:Q309Z6 Uniprot:Q309Z6
Length = 819
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 285 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 344
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 345 GIIQHDLIFSLQQTE 359
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 123 LTQFELTGHSVFDFTHPCDHEEMRE 147
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 166 RSFFLRMKCTLTSRGRTMNIKSATWKVL 193
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 270 ELLGRSIYEYYHALDSDHLTK 290
>UNIPROTKB|Q7YSE5 [details] [associations]
symbol:Q7YSE5 "Hypoxia inducible factor 1 alpha subunit"
species:9986 "Oryctolagus cuniculus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
OrthoDB:EOG40CHGP CTD:3091 EMBL:AY273790 RefSeq:NP_001076251.1
UniGene:Ocu.3329 HSSP:Q16665 ProteinModelPortal:Q7YSE5 SMR:Q7YSE5
STRING:Q7YSE5 GeneID:100009579 Uniprot:Q7YSE5
Length = 819
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|F1PZ54 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 CTD:3091 KO:K08268
OMA:QNAQRKR EMBL:AAEX03005770 RefSeq:XP_003639249.1
Ensembl:ENSCAFT00000024897 GeneID:480348 KEGG:cfa:480348
Uniprot:F1PZ54
Length = 823
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|F1SRU5 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001054 "negative regulation of mesenchymal cell
apoptotic process" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:0061298 "retina vasculature development
in camera-type eye" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 GO:GO:0061030
GO:GO:0003208 OMA:QNAQRKR GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 EMBL:FP236550
Ensembl:ENSSSCT00000005618 ArrayExpress:F1SRU5 Uniprot:F1SRU5
Length = 824
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|Q6H8T3 [details] [associations]
symbol:hif-1a "Hypoxia inducible factor 1 alpha"
species:134510 "Nannospalax judaei" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ715791 ProteinModelPortal:Q6H8T3
SMR:Q6H8T3 Uniprot:Q6H8T3
Length = 824
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|Q16665 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003151
"outflow tract morphogenesis" evidence=IEA] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=IEA] [GO:0006089 "lactate
metabolic process" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0014850 "response
to muscle activity" evidence=IEA] [GO:0021502 "neural fold
elevation formation" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0032007 "negative regulation of
TOR signaling cascade" evidence=IEA] [GO:0035162 "embryonic
hemopoiesis" evidence=IEA] [GO:0035774 "positive regulation of
insulin secretion involved in cellular response to glucose
stimulus" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0061030
"epithelial cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:2001054
"negative regulation of mesenchymal cell apoptotic process"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=TAS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;TAS]
[GO:0035035 "histone acetyltransferase binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0071456 "cellular response to
hypoxia" evidence=IEP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0019896 "axon transport of
mitochondrion" evidence=IMP] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0032364 "oxygen
homeostasis" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=TAS]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IMP] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=TAS] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=TAS] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IC] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045766 "positive regulation of angiogenesis" evidence=IC]
[GO:0045821 "positive regulation of glycolysis" evidence=IC]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISS] [GO:0002248 "connective
tissue replacement involved in inflammatory response wound healing"
evidence=ISS] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=ISS] [GO:0032963 "collagen metabolic process"
evidence=ISS] [GO:0051541 "elastin metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070101 "positive
regulation of chemokine-mediated signaling pathway" evidence=IC]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0071347 "cellular response to interleukin-1"
evidence=IEP] [GO:0010573 "vascular endothelial growth factor
production" evidence=IDA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IDA;IMP] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0032869 GO:GO:0003677 GO:GO:0001755
GO:GO:0001938 GO:GO:0051000 GO:GO:0071542
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0043565
GO:GO:0048661 GO:GO:0008542 GO:GO:0007219 GO:GO:0043524
GO:GO:0032722 GO:GO:0010575 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 GO:GO:0045766 GO:GO:0042593 GO:GO:0032007
GO:GO:0045821 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 Pathway_Interaction_DB:pdgfrbpathway
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0051879 GO:GO:0014850
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:vegfr1_pathway GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 PDB:1D7G
PDB:4H6J PDBsum:1D7G PDBsum:4H6J
Pathway_Interaction_DB:hif1apathway GO:GO:0001892 GO:GO:0042789
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 PDB:1L8C PDBsum:1L8C
GO:GO:0000988 GO:GO:0006089 GO:GO:0010870 GO:GO:0070101 PDB:3HQR
PDB:3HQU PDBsum:3HQR PDBsum:3HQU GO:GO:0032364 PDB:1LM8 PDB:1LQB
PDB:4AJY PDBsum:1LM8 PDBsum:1LQB PDBsum:4AJY PDB:1L3E PDBsum:1L3E
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 OrthoDB:EOG40CHGP CTD:3091 KO:K08268
EMBL:U22431 EMBL:U29165 EMBL:AF050127 EMBL:AF050115 EMBL:AF050116
EMBL:AF050117 EMBL:AF050118 EMBL:AF050119 EMBL:AF050120
EMBL:AF050121 EMBL:AF050122 EMBL:AF050123 EMBL:AF050124
EMBL:AF050125 EMBL:AF050126 EMBL:FJ790247 EMBL:AF207601
EMBL:AF207602 EMBL:AF208487 EMBL:AF304431 EMBL:AB073325
EMBL:BT009776 EMBL:AL137129 EMBL:BC012527 IPI:IPI00003442
IPI:IPI00332963 IPI:IPI00788876 PIR:I38972 RefSeq:NP_001230013.1
RefSeq:NP_001521.1 RefSeq:NP_851397.1 UniGene:Hs.597216
UniGene:Hs.719495 PDB:1H2K PDB:1H2L PDB:1H2M PDB:2ILM PDBsum:1H2K
PDBsum:1H2L PDBsum:1H2M PDBsum:2ILM DisProt:DP00262
ProteinModelPortal:Q16665 SMR:Q16665 DIP:DIP-29722N IntAct:Q16665
MINT:MINT-133270 STRING:Q16665 PhosphoSite:Q16665 DMDM:2498017
PaxDb:Q16665 PRIDE:Q16665 DNASU:3091 Ensembl:ENST00000323441
Ensembl:ENST00000337138 Ensembl:ENST00000539097 GeneID:3091
KEGG:hsa:3091 UCSC:uc001xfq.2 GeneCards:GC14P062162 HGNC:HGNC:4910
HPA:CAB017442 HPA:HPA001275 MIM:603348 neXtProt:NX_Q16665
PharmGKB:PA29283 OMA:QNAQRKR PhylomeDB:Q16665 BindingDB:Q16665
ChEMBL:CHEMBL4261 ChiTaRS:HIF1A EvolutionaryTrace:Q16665
GenomeRNAi:3091 NextBio:12265 ArrayExpress:Q16665 Bgee:Q16665
CleanEx:HS_HIF1A Genevestigator:Q16665 GermOnline:ENSG00000100644
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0061419
GO:GO:0032909 GO:GO:0010573 Uniprot:Q16665
Length = 826
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|A8MYV6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1, alpha subunit
(Basic helix-loop-helix transcription factor), isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005730
EMBL:CH471061 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AL137129 IPI:IPI00788876
UniGene:Hs.597216 UniGene:Hs.719495 HGNC:HGNC:4910 ChiTaRS:HIF1A
SMR:A8MYV6 STRING:A8MYV6 Ensembl:ENST00000394997 UCSC:uc001xfs.2
Uniprot:A8MYV6
Length = 827
Score = 159 (61.0 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 285 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 344
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 345 GIIQHDLIFSLQQTE 359
Score = 75 (31.5 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 123 LTQFELTGHSVFDFTHPCDHEEMRE 147
Score = 57 (25.1 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 166 RSFFLRMKCTLTSRGRTMNIKSATWKVL 193
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 270 ELLGRSIYEYYHALDSDHLTK 290
>UNIPROTKB|Q4ZH58 [details] [associations]
symbol:Q4ZH58 "Hypoxia-inducible factor 1 alpha"
species:64717 "Microtus oeconomus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:DQ010149 ProteinModelPortal:Q4ZH58
SMR:Q4ZH58 Uniprot:Q4ZH58
Length = 828
Score = 159 (61.0 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G + I Q E
Sbjct: 344 GIIQHDLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|Q64F54 [details] [associations]
symbol:Q64F54 "Hypoxia-inducible factor 1 alpha subunit"
species:43179 "Spermophilus tridecemlineatus" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY713478 ProteinModelPortal:Q64F54
SMR:Q64F54 Uniprot:Q64F54
Length = 821
Score = 158 (60.7 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLE 208
G I Q E
Sbjct: 344 GIIQHGLIFSLQQTE 358
Score = 75 (31.5 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>ZFIN|ZDB-GENE-020829-1 [details] [associations]
symbol:sim1a "single-minded homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0021979 "hypothalamus
cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
Uniprot:Q98SJ5
Length = 745
Score = 149 (57.5 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 41/137 (29%), Positives = 61/137 (44%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPP 253
EY+ + Q + PSN EN R R +R + P
Sbjct: 334 DTEYKGLQLSLDQAAS--TKPSFTYNSPSNPVTENRRVGKSRVS-RTKTKTRLSPYSQYP 390
Query: 254 DIEDGTSEGDNSGDQRG 270
SE D G
Sbjct: 391 GFPTDRSESDQDSPWGG 407
Score = 105 (42.0 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L G S ++LDGF F + DG+ LYISET S++LGLSQ
Sbjct: 71 TSLENVGRELGSHLLQTLDGFIFVVAPDGKILYISETASVHLGLSQ 116
Score = 77 (32.2 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + Q E+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQEELTGNSIYEYIHPADHDEM 136
Score = 50 (22.7 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L K GY+
Sbjct: 157 ERSFFLRMKCVLAKANAGLTCGGYK 181
>UNIPROTKB|E1BJ63 [details] [associations]
symbol:E1BJ63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR013655 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 EMBL:DAAA02003571
EMBL:DAAA02003572 IPI:IPI00695521 Ensembl:ENSBTAT00000028592
Uniprot:E1BJ63
Length = 540
Score = 146 (56.5 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQ 206
KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++ EY+ + Q
Sbjct: 172 KGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQ 231
Query: 207 LEDYIQQRGVKREEPSNND 225
+ Q + P++ +
Sbjct: 232 VSTSKSQDSWRTALPTSQE 250
Score = 79 (32.9 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 14 QVEMTGSSVFDYIHQADHTEL 34
QVE+TG+S+++YIH +DH E+
Sbjct: 1 QVELTGNSIYEYIHPSDHDEM 21
Score = 60 (26.2 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 42 ERSFFLRMKCVLAKRNAGLTCSGYK 66
>MGI|MGI:98307 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
Length = 657
Score = 145 (56.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++
Sbjct: 274 TFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQL 207
EY+ + Q+
Sbjct: 334 DVEYKELQLSLDQV 347
Score = 108 (43.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 116
Score = 80 (33.2 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPSDHDEM 136
Score = 60 (26.2 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCSGYK 181
>UNIPROTKB|Q14190 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
Length = 667
Score = 145 (56.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYE 198
KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++ EY+
Sbjct: 287 KGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYK 338
Score = 108 (43.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 116
Score = 80 (33.2 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPSDHDEM 136
Score = 60 (26.2 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCSGYK 181
>UNIPROTKB|F1MKK8 [details] [associations]
symbol:LOC782260 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS51302
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0009880
OMA:KKPMLPA EMBL:DAAA02003571 EMBL:DAAA02003572 IPI:IPI00905160
Ensembl:ENSBTAT00000052408 Uniprot:F1MKK8
Length = 555
Score = 146 (56.5 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMDCCQ 206
KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++ EY+ + Q
Sbjct: 172 KGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQ 231
Query: 207 LEDYIQQRGVKREEPSNND 225
+ Q + P++ +
Sbjct: 232 VSTSKSQDSWRTALPTSQE 250
Score = 79 (32.9 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 14 QVEMTGSSVFDYIHQADHTEL 34
QVE+TG+S+++YIH +DH E+
Sbjct: 1 QVELTGNSIYEYIHPSDHDEM 21
Score = 60 (26.2 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 42 ERSFFLRMKCVLAKRNAGLTCSGYK 66
>UNIPROTKB|H0YDZ5 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 EMBL:AC007193 HGNC:HGNC:15825
Ensembl:ENST00000472815 Uniprot:H0YDZ5
Length = 492
Score = 156 (60.0 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + ++GGY W Q+ ATVV + ++I+C
Sbjct: 250 YIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC 309
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD 234
V+++IS E ++ Q E + +R ++R PS D N D
Sbjct: 310 VHFLISQVEETGVVLSLEQTEQH-SRRPIQRGAPSQKDTPNPGDSLD 355
Score = 65 (27.9 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 14 QVEMTGSSVFDYIHQADHTELAE 36
Q+E+ G S+FD+IH D EL +
Sbjct: 94 QLELIGHSIFDFIHPCDQEELQD 116
Score = 58 (25.5 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSLD 114
+R F +RMKSTLT RG + K++ ++ L+
Sbjct: 134 ERCFSLRMKSTLTSRGRTLNLKAATWKVLN 163
Score = 40 (19.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 241 DLIGCSAYEYIHALD 255
>RGD|1308016 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
Length = 656
Score = 144 (55.7 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYRL++K GG+ WVQS ATVV +S+++ I+ VNYV++
Sbjct: 274 TFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQL 207
EY+ + Q+
Sbjct: 334 EVEYKELQLSLDQV 347
Score = 108 (43.1 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 116
Score = 80 (33.2 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPSDHDEM 136
Score = 60 (26.2 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCSGYK 181
>RGD|61928 [details] [associations]
symbol:Hif1a "hypoxia-inducible factor 1, alpha subunit (basic
helix-loop-helix transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001568 "blood
vessel development" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS;IDA] [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0001892 "embryonic placenta development"
evidence=IEA;ISO] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA;ISO] [GO:0001944 "vasculature development"
evidence=ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0002248 "connective tissue replacement
involved in inflammatory response wound healing" evidence=IEA;ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003690 "double-stranded
DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS;IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006089 "lactate
metabolic process" evidence=IEA;ISO] [GO:0006110 "regulation of
glycolysis" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;TAS] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007595 "lactation"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008542 "visual learning"
evidence=IEA;ISO] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA;ISO] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA;ISO]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA;ISO] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA;ISO] [GO:0014850 "response to
muscle activity" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IEA;ISO]
[GO:0021502 "neural fold elevation formation" evidence=IEA;ISO]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA;ISO]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA;ISO] [GO:0031514
"motile cilium" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032007 "negative regulation of TOR
signaling cascade" evidence=IEA;ISO] [GO:0032364 "oxygen
homeostasis" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0032909 "regulation of transforming growth factor
beta2 production" evidence=IEA;ISO] [GO:0032963 "collagen metabolic
process" evidence=IEA;ISO] [GO:0034244 "negative regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO;ISS] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA;ISO] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042541 "hemoglobin biosynthetic process"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA;ISO;IMP] [GO:0043627 "response to
estrogen stimulus" evidence=IEP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO;ISS] [GO:0045648
"positive regulation of erythrocyte differentiation"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045906 "negative regulation of
vasoconstriction" evidence=IMP] [GO:0045926 "negative regulation of
growth" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP]
[GO:0046716 "muscle cell homeostasis" evidence=IEA;ISO] [GO:0046886
"positive regulation of hormone biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;ISS;IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis" evidence=ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IMP] [GO:0050790 "regulation of catalytic
activity" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0051541 "elastin metabolic process"
evidence=IEA;ISO] [GO:0051879 "Hsp90 protein binding"
evidence=IEA;ISO] [GO:0060135 "maternal process involved in female
pregnancy" evidence=IEP] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IEA;ISO] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA;ISO] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA;ISO] [GO:0061419 "positive regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA;ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEP] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA;ISO] [GO:0071407 "cellular response to
organic cyclic compound" evidence=IEP] [GO:0071456 "cellular
response to hypoxia" evidence=ISO;ISS] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA;ISO] [GO:2001054 "negative
regulation of mesenchymal cell apoptotic process" evidence=IEA;ISO]
[GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:61928 GO:GO:0005634 GO:GO:0005737
GO:GO:0043066 GO:GO:0009612 GO:GO:0032869 GO:GO:0060135
GO:GO:0009749 GO:GO:0048661 GO:GO:0045944 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0044212
GO:GO:0043065 GO:GO:0004871 GO:GO:0003690 GO:GO:0019896
GO:GO:0046982 GO:GO:0043627 GO:GO:0045906 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407 GO:GO:0035035
GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 156 (60.0 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++K++ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKDSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLEDYIQ 212
G + I Q E ++
Sbjct: 344 GIIQHDLIFSLQQTESVLK 362
Score = 75 (31.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|O35800 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005634
GO:GO:0005737 GO:GO:0043066 GO:GO:0009612 GO:GO:0032869
GO:GO:0060135 GO:GO:0009749 GO:GO:0048661 GO:GO:0045944
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 GO:GO:0071222
GO:GO:0044212 GO:GO:0043065 GO:GO:0004871 GO:GO:0003690
GO:GO:0019896 GO:GO:0046982 GO:GO:0043627 GO:GO:0045906
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407
GO:GO:0035035 GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 156 (60.0 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++K++ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKDSQPQCIVCVNYVVS 343
Query: 194 GREYENFIMDCCQLEDYIQ 212
G + I Q E ++
Sbjct: 344 GIIQHDLIFSLQQTESVLK 362
Score = 75 (31.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEEMRE 146
Score = 57 (25.1 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|E2RDR2 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
Length = 562
Score = 142 (55.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 147 KGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYE 198
KGQV T YYRL++K GG+ WVQS AT+V +S+++ I+ VNYV++ EY+
Sbjct: 287 KGQVTTKYYRLLSKLGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDIEYK 338
Score = 108 (43.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++LDGF F + SDG+ +YISET S++LGLSQ
Sbjct: 86 QTLDGFVFVVASDGKIMYISETASVHLGLSQ 116
Score = 80 (33.2 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH +DH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPSDHDEM 136
Score = 60 (26.2 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR SGY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCSGYK 181
>UNIPROTKB|E9PB04 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0045944
GO:GO:0003700 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413 EMBL:AC007193
HGNC:HGNC:15825 IPI:IPI01008729 ProteinModelPortal:E9PB04
SMR:E9PB04 Ensembl:ENST00000339613 ArrayExpress:E9PB04 Bgee:E9PB04
Uniprot:E9PB04
Length = 613
Score = 156 (60.0 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + ++GGY W Q+ ATVV + ++I+C
Sbjct: 221 YIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC 280
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD 234
V+++IS E ++ Q E + +R ++R PS D N D
Sbjct: 281 VHFLISQVEETGVVLSLEQTEQH-SRRPIQRGAPSQKDTPNPGDSLD 326
Score = 68 (29.0 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 55 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 87
Score = 58 (25.5 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSLD 114
+R F +RMKSTLT RG + K++ ++ L+
Sbjct: 105 ERCFSLRMKSTLTSRGRTLNLKAATWKVLN 134
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 212 DLIGCSAYEYIHALD 226
>UNIPROTKB|Q9Y2N7 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005886 GO:GO:0005654 GO:GO:0003677 GO:GO:0045944
EMBL:CH471126 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
Pathway_Interaction_DB:hif1apathway GO:GO:0061418 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 EMBL:AB054067 EMBL:AF463492 EMBL:AB118749
EMBL:AB295039 EMBL:AK021653 EMBL:AK024095 EMBL:AK027725
EMBL:AK297828 EMBL:AC007193 EMBL:BC080551 IPI:IPI00164458
IPI:IPI00292048 IPI:IPI00470784 IPI:IPI00738729 IPI:IPI00746815
IPI:IPI00844043 IPI:IPI00844320 PIR:JC7771 RefSeq:NP_071907.4
RefSeq:NP_690007.1 RefSeq:NP_690008.2 UniGene:Hs.420830
ProteinModelPortal:Q9Y2N7 SMR:Q9Y2N7 STRING:Q9Y2N7
PhosphoSite:Q9Y2N7 DMDM:145558932 PRIDE:Q9Y2N7
Ensembl:ENST00000244302 Ensembl:ENST00000244303
Ensembl:ENST00000300862 Ensembl:ENST00000377670 GeneID:64344
KEGG:hsa:64344 UCSC:uc002peh.3 UCSC:uc002pel.3 CTD:64344
GeneCards:GC19P046800 HGNC:HGNC:15825 HPA:HPA041141 MIM:609976
neXtProt:NX_Q9Y2N7 PharmGKB:PA29285 eggNOG:NOG288942
InParanoid:Q9Y2N7 KO:K09096 GenomeRNAi:64344 NextBio:66283
ArrayExpress:Q9Y2N7 Bgee:Q9Y2N7 CleanEx:HS_HIF3A
Genevestigator:Q9Y2N7 Uniprot:Q9Y2N7
Length = 669
Score = 156 (60.0 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + ++GGY W Q+ ATVV + ++I+C
Sbjct: 277 YIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC 336
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD 234
V+++IS E ++ Q E + +R ++R PS D N D
Sbjct: 337 VHFLISQVEETGVVLSLEQTEQH-SRRPIQRGAPSQKDTPNPGDSLD 382
Score = 68 (29.0 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 111 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 143
Score = 58 (25.5 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSLD 114
+R F +RMKSTLT RG + K++ ++ L+
Sbjct: 161 ERCFSLRMKSTLTSRGRTLNLKAATWKVLN 190
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 268 DLIGCSAYEYIHALD 282
>ZFIN|ZDB-GENE-060607-11 [details] [associations]
symbol:epas1b "endothelial PAS domain protein 1b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060607-11 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0051402 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
OrthoDB:EOG4XPQF6 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 GeneTree:ENSGT00650000093281
EMBL:BX248102 EMBL:BC163440 IPI:IPI00742526 UniGene:Dr.83091
STRING:B3DJD1 Ensembl:ENSDART00000080382 OMA:YNSCPPR Uniprot:B3DJD1
Length = 834
Score = 154 (59.3 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQ ++ YR++ KNGGY WV++ TV+ +S+N+ Q I+CVNYV+S E ++
Sbjct: 289 SHQNLCTKGQAVSGQYRMLAKNGGYVWVETRGTVIYNSRNSQPQCIVCVNYVLSDVEEKS 348
Query: 200 FIMDCCQLE 208
I Q E
Sbjct: 349 LIFSMDQTE 357
Score = 79 (32.9 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 69 (29.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
+SL GF + SDG +++SE ++ ++GL+Q
Sbjct: 93 KSLGGFITVVTSDGDMIFLSENINKFMGLTQ 123
Score = 53 (23.7 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 163 ERDFFMRMKCTVTNRGRTVNLKSASWKVL 191
>MGI|MGI:98306 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
Uniprot:Q61045
Length = 765
Score = 146 (56.5 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD-ADREDGRNS--GDSRNHDHL 250
EY+ QL + Q + +P+ + + +P +D G S S++
Sbjct: 334 DTEYKGL-----QLS--LDQ--ISASKPTFSYTSSSTPTISDNRKGAKSRLSSSKSKSRT 384
Query: 251 SPPDIEDG----TSEGDNSGDQRGRNHLDHVT-QLHNISTPPEQSALT 293
SP G SE D+ G D + QL + P Q L+
Sbjct: 385 SPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLLDPERPGSQHELS 432
Score = 104 (41.7 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
>UNIPROTKB|F5H884 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413
EMBL:AC007193 HGNC:HGNC:15825 IPI:IPI00908806
ProteinModelPortal:F5H884 SMR:F5H884 Ensembl:ENST00000420102
UCSC:uc010xxz.2 ArrayExpress:F5H884 Bgee:F5H884 Uniprot:F5H884
Length = 612
Score = 156 (60.0 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + ++GGY W Q+ ATVV + ++I+C
Sbjct: 226 YIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC 285
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDAD 234
V+++IS E ++ Q E + +R ++R PS D N D
Sbjct: 286 VHFLISQVEETGVVLSLEQTEQH-SRRPIQRGAPSQKDTPNPGDSLD 331
Score = 65 (27.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 14 QVEMTGSSVFDYIHQADHTELAE 36
Q+E+ G S+FD+IH D EL +
Sbjct: 70 QLELIGHSIFDFIHPCDQEELQD 92
Score = 58 (25.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSLD 114
+R F +RMKSTLT RG + K++ ++ L+
Sbjct: 110 ERCFSLRMKSTLTSRGRTLNLKAATWKVLN 139
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 217 DLIGCSAYEYIHALD 231
>RGD|1309949 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
Uniprot:D3ZMU8
Length = 765
Score = 145 (56.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD-ADREDGRNS--GDSRNHDHL 250
EY+ QL + Q + +P+ + + +P D G S S++
Sbjct: 334 DTEYKGL-----QLS--LDQ--ISPSKPTFSYTSSSTPTITDNRKGAKSRLSSSKSKSRT 384
Query: 251 SPPDIEDG----TSEGDNSGDQRGRNHLDHVT-QLHNISTPPEQSALT 293
SP G SE D+ G D + QL + P Q L+
Sbjct: 385 SPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLLDPERPGSQHELS 432
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
>UNIPROTKB|E2QWV9 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
Length = 766
Score = 145 (56.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPP 253
EY+ QL + Q + +P+ + + +P D R SR LS
Sbjct: 334 DTEYKGL-----QLS--LDQ--ISASKPAFSYTSSSTPTMT--DNRKGAKSR----LSSS 378
Query: 254 DIEDGTSEGDN-SGDQRGRNHLDHVTQ 279
+ TS SG R+ DH +Q
Sbjct: 379 KSKSRTSPYPQYSGFHTERSESDHDSQ 405
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
>UNIPROTKB|P81133 [details] [associations]
symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
Length = 766
Score = 145 (56.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNYV++
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLT 333
Query: 194 GREYENFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHDHLSPP 253
EY+ QL + Q + +P+ + + +P D R SR LS
Sbjct: 334 DTEYKGL-----QLS--LDQ--ISASKPAFSYTSSSTPTMT--DNRKGAKSR----LSSS 378
Query: 254 DIEDGTSEGDN-SGDQRGRNHLDHVTQ 279
+ TS SG R+ DH +Q
Sbjct: 379 KSKSRTSPYPQYSGFHTERSESDHDSQ 405
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
>FB|FBgn0004666 [details] [associations]
symbol:sim "single-minded" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007398 "ectoderm development"
evidence=TAS] [GO:0007628 "adult walking behavior"
evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
[GO:0007420 "brain development" evidence=IMP] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007419 "ventral cord development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
Length = 697
Score = 156 (60.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 126 FLYISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNI 185
+ YI + + S ++ KGQV T YYR + K GG+ WVQS AT+V +S+++ E I
Sbjct: 314 YQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFI 373
Query: 186 ICVNYVISGREYENFIMDCCQLEDYIQQRGVKREEP 221
+ VNYV+S RE ++ +++ ++ Q GV + EP
Sbjct: 374 VSVNYVLSEREVKDLVLN--EI-----QTGVVKREP 402
Score = 89 (36.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 28/105 (26%), Positives = 43/105 (40%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGT 66
H G + QVE+TG+S+F+YIH D E+ P A + G G
Sbjct: 134 HLG--LSQVELTGNSIFEYIHNYDQDEM---NAILSLHPHINQHP-LAQTHTPIGSPNGV 187
Query: 67 ANPDVXXXXXXXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+P +++F +RMK L KR +SG++
Sbjct: 188 QHPSAYDHDRGSHTIEI---EKTFFLRMKCVLAKRNAGLTTSGFK 229
>UNIPROTKB|Q4R658 [details] [associations]
symbol:Q4R658 "Testis cDNA, clone: QtsA-19088, similar to
human hypoxia-inducible factor 1, alpha subunit
(basichelix-loop-helix transcription factor) (HIF1A),transcript
variant 1," species:9541 "Macaca fascicularis" [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0035035 "histone acetyltransferase binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
EMBL:AB169332 ProteinModelPortal:Q4R658 SMR:Q4R658 Uniprot:Q4R658
Length = 826
Score = 157 (60.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 144 VINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMD 203
+ KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+SG + I
Sbjct: 294 MFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFS 353
Query: 204 CCQLE 208
Q E
Sbjct: 354 LQQTE 358
Score = 87 (35.7 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQWQV 144
++LDGF L DG +YIS+ V+ Y+GL+Q+++
Sbjct: 94 KALDGFVMVLTDDGDMIYISDNVNKYMGLTQFEL 127
Score = 68 (29.0 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H H E+ E
Sbjct: 122 LTQFELTGHSVFDFTHPCGHEEMRE 146
Score = 57 (25.1 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYRSL 113
RSF +RMK TLT RG + KS+ ++ L
Sbjct: 165 RSFFLRMKCTLTSRGRTMNIKSATWKVL 192
Score = 44 (20.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G S+++Y H D L +
Sbjct: 269 ELLGRSIYEYYHALDSDHLTK 289
>UNIPROTKB|F1RYR5 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
Length = 767
Score = 127 (49.8 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
+ +L + ++ KGQV T YYR + K+GG+ WVQS AT+V +S+++ I+ VNY S
Sbjct: 274 TFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNY--S 331
Query: 194 GRE 196
RE
Sbjct: 332 SRE 334
Score = 104 (41.7 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 96 STLTKRGCHFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
S L G S ++LDGF F + DG+ +YISET S++LGLSQ
Sbjct: 71 SPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQ 116
Score = 83 (34.3 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 7 HQGTHILQVEMTGSSVFDYIHQADHTEL 34
H G + QVE+TG+S+++YIH ADH E+
Sbjct: 111 HLG--LSQVELTGNSIYEYIHPADHDEM 136
Score = 56 (24.8 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMK L KR GY+
Sbjct: 157 ERSFFLRMKCVLAKRNAGLTCGGYK 181
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 209 DYIQQRGVKREEPSNNDPENDSPDA-DREDGRNSGD-SRNHDHLSPPDIEDGTSEGDNSG 266
D+I QR K P ND +N SP A R NS S++ L+ + S +G
Sbjct: 632 DHIHQREGKMLSPHENDYDN-SPTALSRISSPNSDRISKSSLILAKDYLHSDMSPHQTAG 690
Query: 267 D 267
D
Sbjct: 691 D 691
>UNIPROTKB|F1NG41 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001974 "blood vessel
remodeling" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0042415
"norepinephrine metabolic process" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0043619 GO:GO:0042415 OMA:QYQDYSL InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AADN02011973 IPI:IPI00572997
Ensembl:ENSGALT00000016253 ArrayExpress:F1NG41 Uniprot:F1NG41
Length = 859
Score = 147 (56.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV+T YR++ K+GGY W+++ TV+ +++N Q IICVNYV+S E +
Sbjct: 283 SHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQPQCIICVNYVLSEIEKND 342
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 343 IVFSMDQTE 351
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 113 LTQVELTGHSIFDFTHPCDHEEIRE 137
Score = 70 (29.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE V+ Y+GL+Q
Sbjct: 85 KALEGFIAVVTQDGDMIFLSENVNKYMGLTQ 115
Score = 51 (23.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 157 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 185
>UNIPROTKB|A5PJT1 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 HOGENOM:HOG000234306 HOVERGEN:HBG060456 OMA:QYQDYSL
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:DAAA02030718
EMBL:DAAA02030719 EMBL:BC142229 IPI:IPI00718553 UniGene:Bt.45570
SMR:A5PJT1 STRING:A5PJT1 Ensembl:ENSBTAT00000004836
InParanoid:A5PJT1 Uniprot:A5PJT1
Length = 870
Score = 137 (53.3 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TV+ + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 352 VVFSMDQTE 360
Score = 79 (32.9 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 51 (23.0 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 165 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
Score = 44 (20.5 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 242 GDSRNHDHLSPPDIEDGTSEGD 263
G S+ HLSPP TS G+
Sbjct: 772 GRSQPLRHLSPPQPPSATSPGE 793
>ZFIN|ZDB-GENE-040426-1315 [details] [associations]
symbol:hif1al "hypoxia-inducible factor 1, alpha
subunit, like" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-1315 GO:GO:0005737 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR021537 Pfam:PF11413 EMBL:AY330295
IPI:IPI00960923 UniGene:Dr.11978 ProteinModelPortal:Q6EGR9
InParanoid:Q6EGR9 ArrayExpress:Q6EGR9 Uniprot:Q6EGR9
Length = 626
Score = 153 (58.9 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 28/91 (30%), Positives = 56/91 (61%)
Query: 144 VINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMD 203
+ +KGQV T YR + KNGG+ W ++ ATV+ +S+ + + ++C+N+++SG E ++ +
Sbjct: 283 LFSKGQVCTGQYRFLTKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEQDVVFS 342
Query: 204 ----CCQLEDYIQQRGVKREEPSNNDPENDS 230
C + + +++ V +EE ++D E S
Sbjct: 343 LEQTCEKPKPKVERLMVLKEEQEDSDMEESS 373
Score = 69 (29.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 11/37 (29%), Positives = 26/37 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINK 147
++L GF + +G +++SE+VS Y+G++Q +++ +
Sbjct: 91 QALAGFILVMTEEGDMVFLSESVSKYIGITQLELLGQ 127
Score = 62 (26.9 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
I Q+E+ G SV++++H D EL +
Sbjct: 119 ITQLELLGQSVYEFVHPCDQEELRD 143
Score = 51 (23.0 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 84 KGCDRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
K + +F +RMKSTLT G + KS+ ++ L
Sbjct: 155 KTMEHNFFLRMKSTLTHTGRTVNIKSATWKVL 186
>UNIPROTKB|Q9I8A9 [details] [associations]
symbol:hif1a "Hypoxia-inducible factor 1-alpha"
species:8355 "Xenopus laevis" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0035035
"histone acetyltransferase binding" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ277829 RefSeq:NP_001165655.1
UniGene:Xl.4589 ProteinModelPortal:Q9I8A9 SMR:Q9I8A9
GeneID:100337573 KEGG:xla:100337573 Uniprot:Q9I8A9
Length = 805
Score = 155 (59.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ +SKN+ Q I+CVNYV+S
Sbjct: 285 SDHLTKPNYNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQPQCIVCVNYVLS 344
Query: 194 GREYENFIMDCCQLEDY---IQQRGVKREEPSNN-DPENDS 230
++ I+ Q ++ + +K E + EN+S
Sbjct: 345 EVVEKDLILSLGQTASVLIPVESQEIKMPEIFTELNEENNS 385
Score = 77 (32.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q E+TG SVFD+ H DH EL E
Sbjct: 122 LTQFELTGHSVFDFTHPCDHEELRE 146
Score = 71 (30.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQWQV 144
++L+GF L +G +Y+SE V+ +GL+Q+++
Sbjct: 94 KALEGFVLVLTEEGDMIYLSENVNKCMGLTQFEL 127
Score = 45 (20.9 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 16 EMTGSSVFDYIHQADHTELAE 36
E+ G SV++Y H D L +
Sbjct: 270 ELLGRSVYEYYHALDSDHLTK 290
>ZFIN|ZDB-GENE-040426-706 [details] [associations]
symbol:hif1ab "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-706 GO:GO:0005634 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OrthoDB:EOG40CHGP OMA:QNAQRKR
EMBL:BX255914 EMBL:AY326951 IPI:IPI00491851 UniGene:Dr.75612
SMR:Q6EHI4 STRING:Q6EHI4 Ensembl:ENSDART00000018500
InParanoid:Q6EHI4 Uniprot:Q6EHI4
Length = 777
Score = 143 (55.4 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQ T YR++ K GG+ WV++ ATV+ + KN+ Q I+CVNYV+S
Sbjct: 284 SDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLS 343
Query: 194 G 194
G
Sbjct: 344 G 344
Score = 68 (29.0 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ Q ++TG S+F++ H DH EL E
Sbjct: 123 LTQFDLTGHSIFEFSHPCDHEELRE 147
Score = 59 (25.8 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+RSF +RMK TLT RG + KS+ ++ L
Sbjct: 164 ERSFFLRMKCTLTSRGRTVNIKSATWKVL 192
>MGI|MGI:109169 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10090
"Mus musculus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=ISO;IMP] [GO:0001892 "embryonic
placenta development" evidence=IGI] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002027 "regulation of heart rate"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IMP]
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007601 "visual
perception" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0030097 "hemopoiesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IGI] [GO:0030218
"erythrocyte differentiation" evidence=IMP] [GO:0030324 "lung
development" evidence=IMP] [GO:0035035 "histone acetyltransferase
binding" evidence=ISO] [GO:0042415 "norepinephrine metabolic
process" evidence=IMP] [GO:0043129 "surfactant homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IGI;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IPI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
[GO:0048625 "myoblast cell fate commitment" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109169
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0001666 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0035035 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OMA:QYQDYSL
OrthoDB:EOG4XPQF6 ChiTaRS:EPAS1 GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:U81983
EMBL:D89787 EMBL:AF045160 IPI:IPI00312615 RefSeq:NP_034267.3
UniGene:Mm.1415 ProteinModelPortal:P97481 SMR:P97481 DIP:DIP-46109N
STRING:P97481 PhosphoSite:P97481 PRIDE:P97481
Ensembl:ENSMUST00000024954 GeneID:13819 KEGG:mmu:13819
UCSC:uc008duj.2 GeneTree:ENSGT00650000093281 InParanoid:P97481
NextBio:284608 Bgee:P97481 CleanEx:MM_EPAS1 Genevestigator:P97481
GermOnline:ENSMUSG00000024140 Uniprot:P97481
Length = 874
Score = 137 (53.3 bits), Expect = 6.7e-12, Sum P(4) = 6.7e-12
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TV+ + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 352 VVFSMDQTE 360
Score = 79 (32.9 bits), Expect = 6.7e-12, Sum P(4) = 6.7e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 51 (23.0 bits), Expect = 6.7e-12, Sum P(4) = 6.7e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 165 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
Score = 39 (18.8 bits), Expect = 6.7e-12, Sum P(4) = 6.7e-12
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 221 PSNNDPENDSPDA-DREDGRNSGDSRNHDHLSPPDIEDGTSEGDNS 265
P N +PD ++ R G H L PP S G+N+
Sbjct: 756 PDKTISANMAPDEFTQKSMRGLGQPLRH--LPPPQPPSTRSSGENA 799
>UNIPROTKB|E2QUK0 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0042415 "norepinephrine
metabolic process" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0030324 GO:GO:0007601 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AAEX03007490
Ensembl:ENSCAFT00000004132 Uniprot:E2QUK0
Length = 869
Score = 137 (53.3 bits), Expect = 8.2e-12, Sum P(4) = 8.2e-12
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TV+ + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 352 VVFSMDQTE 360
Score = 79 (32.9 bits), Expect = 8.2e-12, Sum P(4) = 8.2e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 51 (23.0 bits), Expect = 8.2e-12, Sum P(4) = 8.2e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 165 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
Score = 38 (18.4 bits), Expect = 8.2e-12, Sum P(4) = 8.2e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 207 LEDYIQQRGVKREEPSN 223
L+ Y QQ G K+ EP +
Sbjct: 585 LDKYQQQLGSKKIEPEH 601
>RGD|68404 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001666 "response to hypoxia" evidence=ISO;IDA;TAS] [GO:0001892
"embryonic placenta development" evidence=ISO] [GO:0001974 "blood
vessel remodeling" evidence=ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=ISO] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030154
"cell differentiation" evidence=IEA;ISO] [GO:0030218 "erythrocyte
differentiation" evidence=ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=ISO] [GO:0042415 "norepinephrine metabolic process"
evidence=ISO] [GO:0043129 "surfactant homeostasis" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
[GO:0048625 "myoblast cell fate commitment" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:68404 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0030324 GO:GO:0007601 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 139 (54.0 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TVV + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
++ Q E
Sbjct: 352 VVVSMDQTE 360
Score = 79 (32.9 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 52 (23.4 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 84 KGCDRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+ +R F +RMK T+T RG + KS+ ++ L
Sbjct: 162 RSTERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
>UNIPROTKB|Q9JHS1 [details] [associations]
symbol:Epas1 "Endothelial PAS domain-containing protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:68404 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0001666 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 GO:GO:0002027 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 139 (54.0 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TVV + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
++ Q E
Sbjct: 352 VVVSMDQTE 360
Score = 79 (32.9 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 52 (23.4 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 84 KGCDRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+ +R F +RMK T+T RG + KS+ ++ L
Sbjct: 162 RSTERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
>UNIPROTKB|F1S5K9 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CU570958
Ensembl:ENSSSCT00000009245 Uniprot:F1S5K9
Length = 863
Score = 137 (53.3 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TV+ + +N Q I+CVNYV+S E +
Sbjct: 284 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKND 343
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 344 VVFSMDQTE 352
Score = 79 (32.9 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 113 LTQVELTGHSIFDFTHPCDHEEIRE 137
Score = 68 (29.0 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 85 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 115
Score = 51 (23.0 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 157 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 185
>UNIPROTKB|Q99814 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0033554 "cellular response to stress" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0071456 "cellular response
to hypoxia" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048625 "myoblast cell fate commitment"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0007165 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0006366 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 Pathway_Interaction_DB:vegfr1_2_pathway GO:GO:0002027
PDB:2A24 PDB:3F1N PDB:3F1O PDB:3F1P PDB:3H7W PDB:3H82 PDBsum:2A24
PDBsum:3F1N PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82
GO:GO:0001892 GO:GO:0061418 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 Orphanet:247511 EMBL:U81984 EMBL:U51626
EMBL:BC051338 IPI:IPI00294084 RefSeq:NP_001421.2 UniGene:Hs.468410
PDB:1P97 PDBsum:1P97 ProteinModelPortal:Q99814 SMR:Q99814
DIP:DIP-32857N IntAct:Q99814 MINT:MINT-1199606 STRING:Q99814
PhosphoSite:Q99814 DMDM:32470617 PRIDE:Q99814
Ensembl:ENST00000263734 GeneID:2034 KEGG:hsa:2034 UCSC:uc002ruv.3
CTD:2034 GeneCards:GC02P046436 HGNC:HGNC:3374 HPA:CAB012248
MIM:603349 MIM:611783 neXtProt:NX_Q99814 PharmGKB:PA27809
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InParanoid:Q99814 KO:K09095 OMA:QYQDYSL OrthoDB:EOG4XPQF6
PhylomeDB:Q99814 BindingDB:Q99814 ChEMBL:CHEMBL1744522
ChiTaRS:EPAS1 EvolutionaryTrace:Q99814 GenomeRNAi:2034 NextBio:8255
ArrayExpress:Q99814 Bgee:Q99814 CleanEx:HS_EPAS1
Genevestigator:Q99814 GermOnline:ENSG00000116016 GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
Uniprot:Q99814
Length = 870
Score = 137 (53.3 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN 199
S + KGQV++ YR++ K+GGY W+++ TV+ + +N Q I+CVNYV+S E +
Sbjct: 292 SHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKND 351
Query: 200 FIMDCCQLE 208
+ Q E
Sbjct: 352 VVFSMDQTE 360
Score = 79 (32.9 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
+ QVE+TG S+FD+ H DH E+ E
Sbjct: 121 LTQVELTGHSIFDFTHPCDHEEIRE 145
Score = 68 (29.0 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
++L+GF + DG +++SE +S ++GL+Q
Sbjct: 93 KALEGFIAVVTQDGDMIFLSENISKFMGLTQ 123
Score = 51 (23.0 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 87 DRSFCIRMKSTLTKRG--CHFKSSGYRSL 113
+R F +RMK T+T RG + KS+ ++ L
Sbjct: 165 ERDFFMRMKCTVTNRGRTVNLKSATWKVL 193
>RGD|70332 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO;TAS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:70332
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AJ277827
IPI:IPI00199807 RefSeq:NP_071973.1 UniGene:Rn.161814
ProteinModelPortal:Q9JHS2 STRING:Q9JHS2 PhosphoSite:Q9JHS2
PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345 UCSC:RGD:70332
InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 137 (53.3 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + + GGY W Q+ ATVV + ++IIC
Sbjct: 275 YIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIIC 334
Query: 188 VNYVISGREYENFIMDCCQLEDYIQ---QRGV--KREEPSNN-DP 226
V+++IS E ++ Q E + + Q G K+ P N+ DP
Sbjct: 335 VHFLISRVEENGVVLSLEQTEQHTRRPPQLGTSSKKGIPGNSLDP 379
Score = 68 (29.0 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 109 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 141
Score = 55 (24.4 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 88 RSFCIRMKSTLTKRG 102
R F +RMKSTLT RG
Sbjct: 160 RHFSLRMKSTLTSRG 174
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 266 DLIGCSAYEYIHALD 280
>UNIPROTKB|Q9JHS2 [details] [associations]
symbol:Hif3a "Hypoxia-inducible factor 3-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:70332 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 HSSP:Q99814 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 CTD:64344 eggNOG:NOG288942
KO:K09096 EMBL:AJ277827 IPI:IPI00199807 RefSeq:NP_071973.1
UniGene:Rn.161814 ProteinModelPortal:Q9JHS2 STRING:Q9JHS2
PhosphoSite:Q9JHS2 PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345
UCSC:RGD:70332 InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 137 (53.3 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + + GGY W Q+ ATVV + ++IIC
Sbjct: 275 YIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIIC 334
Query: 188 VNYVISGREYENFIMDCCQLEDYIQ---QRGV--KREEPSNN-DP 226
V+++IS E ++ Q E + + Q G K+ P N+ DP
Sbjct: 335 VHFLISRVEENGVVLSLEQTEQHTRRPPQLGTSSKKGIPGNSLDP 379
Score = 68 (29.0 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 109 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 141
Score = 55 (24.4 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 88 RSFCIRMKSTLTKRG 102
R F +RMKSTLT RG
Sbjct: 160 RHFSLRMKSTLTSRG 174
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 266 DLIGCSAYEYIHALD 280
>MGI|MGI:1859778 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IPI] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IC] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1859778 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006366
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
EMBL:AC148976 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AF060194 EMBL:AH008971
EMBL:AF416641 EMBL:BC120587 EMBL:AK144472 IPI:IPI00131181
IPI:IPI00621179 RefSeq:NP_058564.2 UniGene:Mm.135110
ProteinModelPortal:Q0VBL6 SMR:Q0VBL6 STRING:Q0VBL6
PhosphoSite:Q0VBL6 PRIDE:Q0VBL6 Ensembl:ENSMUST00000037762
GeneID:53417 KEGG:mmu:53417 UCSC:uc009fir.2 UCSC:uc009fit.2
OrthoDB:EOG4BVRT7 NextBio:310241 Bgee:Q0VBL6 CleanEx:MM_HIF3A
Genevestigator:Q0VBL6 Uniprot:Q0VBL6
Length = 662
Score = 134 (52.2 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 128 YISETVSIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIIC 187
YI S + S +++KGQ +T YR + + GGY W Q+ ATVV + ++IIC
Sbjct: 275 YIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIIC 334
Query: 188 VNYVISGREYENFIMDCCQLEDYIQQRGVKREEPSNNDPEN--DSP 231
V+++IS E ++ Q E + ++ P N DSP
Sbjct: 335 VHFLISRVEETGVVLSLEQTEQHTRRPPRLSASSQKGIPGNSVDSP 380
Score = 68 (29.0 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ELFEQHQGTHILQVEMTGSSVFDYIHQADHTELAE 36
E +H G + Q+E+ G S+FD+IH D EL +
Sbjct: 109 ENVSKHLG--LSQLELIGHSIFDFIHPCDQEELQD 141
Score = 57 (25.1 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 87 DRSFCIRMKSTLTKRG 102
+R F +RMKSTLT RG
Sbjct: 159 ERHFSLRMKSTLTSRG 174
Score = 40 (19.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G S ++YIH D
Sbjct: 266 DLIGCSAYEYIHALD 280
>UNIPROTKB|B4DR69 [details] [associations]
symbol:NPAS1 "cDNA FLJ51724, highly similar to Neuronal PAS
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR000014 SMART:SM00091 GO:GO:0004871 UniGene:Hs.79564
HGNC:HGNC:7894 EMBL:AC008755 EMBL:AK299128 IPI:IPI00910071
SMR:B4DR69 STRING:B4DR69 Ensembl:ENST00000439365 UCSC:uc010xyj.2
HOGENOM:HOG000207686 HOVERGEN:HBG103148 Uniprot:B4DR69
Length = 234
Score = 160 (61.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/95 (40%), Positives = 48/95 (50%)
Query: 17 MTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPDVXXXXX 76
MTGSSVFDYIH DH+E+ E P ++S S T P++
Sbjct: 1 MTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADT--PEIEASLT 58
Query: 77 XXXXXXYKGCDRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF +RMKSTLTKRG H K+SGY+
Sbjct: 59 KVPPSSLVQ-ERSFFVRMKSTLTKRGLHVKASGYK 92
>UNIPROTKB|F1NQK6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0002248 "connective tissue replacement involved in inflammatory
response wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0010573 "vascular endothelial growth factor production"
evidence=IEA] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA]
InterPro:IPR001321 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080
InterPro:IPR001610 GO:GO:0005737 GO:GO:0007165 GO:GO:0030154
GO:GO:0005730 GO:GO:0035774 GO:GO:0006110 GO:GO:0043565
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0042593 GO:GO:0032007 GO:GO:0006879 GO:GO:0005667
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0044212
GO:GO:0046716 GO:GO:0009434 GO:GO:0045926 GO:GO:0019896
GO:GO:0045648 SMART:SM00086 GO:GO:0014850 GO:GO:0030949
GO:GO:0071347 GO:GO:0010634 GO:GO:0046886 GO:GO:0043619
GO:GO:0030502 GO:GO:0042541 GO:GO:0000988 GO:GO:0006089
GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 GeneTree:ENSGT00650000093281
GO:GO:0001922 GO:GO:0051541 GO:GO:2001054 GO:GO:0032909
EMBL:AADN02003885 EMBL:AADN02003886 IPI:IPI00823267
Ensembl:ENSGALT00000037379 ArrayExpress:F1NQK6 Uniprot:F1NQK6
Length = 525
Score = 160 (61.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 134 SIYLGLSQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVIS 193
S +L + + KGQV T YR++ K GGY WV++ ATV+ ++KN+ Q I+CVNYV+S
Sbjct: 14 SDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLS 73
Query: 194 GREYENFIMDCCQLE 208
G ++ I Q E
Sbjct: 74 GIVQKDLIFSLGQTE 88
Score = 38 (18.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 19 GSSVFDYIHQADHTELAE 36
G S+++Y H D L +
Sbjct: 2 GRSIYEYYHALDSDHLTK 19
>UNIPROTKB|H0YHB6 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 PROSITE:PS50112
SMART:SM00091 GO:GO:0004871 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 Ensembl:ENST00000546849 Bgee:H0YHB6
Uniprot:H0YHB6
Length = 125
Score = 136 (52.9 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVI 145
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ Q +
Sbjct: 59 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQAQTL 100
>UNIPROTKB|F8W0C2 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR013767
Pfam:PF00989 PROSITE:PS50112 SMART:SM00091 GO:GO:0006355
GO:GO:0004871 TIGRFAMs:TIGR00229 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 IPI:IPI01020861
ProteinModelPortal:F8W0C2 SMR:F8W0C2 Ensembl:ENST00000551008
UCSC:uc001wrw.3 ArrayExpress:F8W0C2 Bgee:F8W0C2 Uniprot:F8W0C2
Length = 155
Score = 132 (51.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 104 HFKSSGYRSLDGFAFALGSDGRFLYISETVSIYLGLSQ 141
H S +SLDGF FAL +G+FLYISETVSIYLGLSQ
Sbjct: 47 HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ 84
Score = 101 (40.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 14 QVEMTGSSVFDYIHQADHTELAEXXXXXXXXXXXXASPGSANSEEGSGMNTGTANPD 70
QVE+TGSSVFDY+H DH E+AE S G+A E+G+ + ++ +
Sbjct: 84 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTA--EDGASSASSSSQSE 138
Score = 51 (23.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 1 MELFEQHQGTHILQ 14
+E+FE H G+HILQ
Sbjct: 41 IEVFEAHLGSHILQ 54
>ZFIN|ZDB-GENE-050211-2 [details] [associations]
symbol:hif1al2 "hypoxia-inducible factor 1, alpha
subunit, like 2" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-050211-2 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:BX530031
IPI:IPI00554390 Ensembl:ENSDART00000130632 ArrayExpress:F1QQQ1
Bgee:F1QQQ1 Uniprot:F1QQQ1
Length = 663
Score = 142 (55.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 29/107 (27%), Positives = 60/107 (56%)
Query: 144 VINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYEN--FI 201
+++KGQV T YRL+++ GGY W ++ A++VC+S+ ++++C+NY++S E N F+
Sbjct: 296 LLSKGQVSTGKYRLLHRYGGYVWAETDASLVCNSQTGVPESVVCINYILSEVEQPNLPFL 355
Query: 202 MDCCQLEDYIQQRGVKREEPSNNDPENDSPDADREDGRNSGDSRNHD 248
++ + E ++ +P P +E ++ +S H+
Sbjct: 356 LE--KTEQLLKP--TSSSYCPETEPAPFPPSRGQEGEKDLKESNEHN 398
Score = 50 (22.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 8/36 (22%), Positives = 22/36 (61%)
Query: 112 SLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINK 147
+L GF L +G+ ++ ++ ++ + G++Q +I +
Sbjct: 118 ALGGFVVLLSLNGKVIFATKGLTTHTGINQMDLIGR 153
Score = 49 (22.3 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 10 THILQVEMTGSSVFDYIHQADHTELAE 36
T I Q+++ G S+ +++H D E+ +
Sbjct: 143 TGINQMDLIGRSLLEFLHPCDQMEVKD 169
Score = 40 (19.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 EMTGSSVFDYIHQAD 30
++ G SV+ Y H +D
Sbjct: 271 DLLGQSVYQYYHPSD 285
>WB|WBGene00001851 [details] [associations]
symbol:hif-1 species:6239 "Caenorhabditis elegans"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0043066 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000160 GO:GO:0010286 EMBL:Z92833
GeneTree:ENSGT00650000093281 KO:K08268 EMBL:AF364604 EMBL:AL023842
RefSeq:NP_001023891.2 RefSeq:NP_001023892.1 RefSeq:NP_001023893.1
RefSeq:NP_001023894.2 RefSeq:NP_508008.4 UniGene:Cel.17085
HSSP:G5EGD2 ProteinModelPortal:G5EGD2 SMR:G5EGD2 IntAct:G5EGD2
STRING:G5EGD2 EnsemblMetazoa:F38A6.3a GeneID:13218924 GeneID:180359
KEGG:cel:CELE_F38A6.3 KEGG:cel:CELE_F38A6.3a CTD:180359
WormBase:F38A6.3a WormBase:F38A6.3b WormBase:F38A6.3c
WormBase:F38A6.3d WormBase:F38A6.3e eggNOG:meNOG07022
HOGENOM:HOG000017809 OMA:VHIDRSP NextBio:909024 GO:GO:0061433
Uniprot:G5EGD2
Length = 719
Score = 111 (44.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVC-SSKNADEQNIICVNYVISGREYE 198
S ++ KG + T YYRL+ N W+Q+ AT + ++K Q +ICV+YV+ + E
Sbjct: 284 SMKELFAKGHIRTPYYRLIAANDTLAWIQTEATTITHTTKGQKGQYVICVHYVLGIQGAE 343
Query: 199 NFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD 232
++ C Q +K+E D P+
Sbjct: 344 ESLVVCTDSMPAGMQVDIKKEVDDTRDYIGRQPE 377
Score = 84 (34.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 113 LDGFAFALGSDGRFLYISETVSIYLGLSQ 141
LDGF + SD LY++E+V++YLGL+Q
Sbjct: 94 LDGFVMIVDSDSSILYVTESVAMYLGLTQ 122
Score = 50 (22.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTE 33
+ Q ++TG ++ D++H +D+ E
Sbjct: 120 LTQTDLTGRALRDFLHPSDYDE 141
>UNIPROTKB|G5EGD2 [details] [associations]
symbol:hif-1 "Hypoxia-inducible factor 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0061433 "cellular response to caloric restriction"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0008340 GO:GO:0006915 GO:GO:0043066
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006366
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000160
GO:GO:0010286 EMBL:Z92833 GeneTree:ENSGT00650000093281 KO:K08268
EMBL:AF364604 EMBL:AL023842 RefSeq:NP_001023891.2
RefSeq:NP_001023892.1 RefSeq:NP_001023893.1 RefSeq:NP_001023894.2
RefSeq:NP_508008.4 UniGene:Cel.17085 HSSP:G5EGD2
ProteinModelPortal:G5EGD2 SMR:G5EGD2 IntAct:G5EGD2 STRING:G5EGD2
EnsemblMetazoa:F38A6.3a GeneID:13218924 GeneID:180359
KEGG:cel:CELE_F38A6.3 KEGG:cel:CELE_F38A6.3a CTD:180359
WormBase:F38A6.3a WormBase:F38A6.3b WormBase:F38A6.3c
WormBase:F38A6.3d WormBase:F38A6.3e eggNOG:meNOG07022
HOGENOM:HOG000017809 OMA:VHIDRSP NextBio:909024 GO:GO:0061433
Uniprot:G5EGD2
Length = 719
Score = 111 (44.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 140 SQWQVINKGQVLTHYYRLMNKNGGYTWVQSCATVVC-SSKNADEQNIICVNYVISGREYE 198
S ++ KG + T YYRL+ N W+Q+ AT + ++K Q +ICV+YV+ + E
Sbjct: 284 SMKELFAKGHIRTPYYRLIAANDTLAWIQTEATTITHTTKGQKGQYVICVHYVLGIQGAE 343
Query: 199 NFIMDCCQLEDYIQQRGVKREEPSNNDPENDSPD 232
++ C Q +K+E D P+
Sbjct: 344 ESLVVCTDSMPAGMQVDIKKEVDDTRDYIGRQPE 377
Score = 84 (34.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 113 LDGFAFALGSDGRFLYISETVSIYLGLSQ 141
LDGF + SD LY++E+V++YLGL+Q
Sbjct: 94 LDGFVMIVDSDSSILYVTESVAMYLGLTQ 122
Score = 50 (22.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 12 ILQVEMTGSSVFDYIHQADHTE 33
+ Q ++TG ++ D++H +D+ E
Sbjct: 120 LTQTDLTGRALRDFLHPSDYDE 141
>FB|FBgn0015542 [details] [associations]
symbol:sima "similar" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;NAS] [GO:0071456 "cellular response to hypoxia"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
EMBL:AE014297 GO:GO:0005634 GO:GO:0005737 GO:GO:0030308
GO:GO:0032869 GO:GO:0003677 GO:GO:0045944 GO:GO:0071456
GO:GO:0006351 GO:GO:0006974 GO:GO:0004871 SMART:SM00086
eggNOG:NOG289264 GeneTree:ENSGT00650000093281 KO:K08268 EMBL:U43090
PIR:JC4851 RefSeq:NP_524584.2 UniGene:Dm.6953
ProteinModelPortal:Q24167 SMR:Q24167 DIP:DIP-21002N IntAct:Q24167
MINT:MINT-304504 STRING:Q24167 PaxDb:Q24167
EnsemblMetazoa:FBtr0085565 GeneID:43580 KEGG:dme:Dmel_CG7951
CTD:43580 FlyBase:FBgn0015542 InParanoid:Q24167 OMA:PGPRTIT
OrthoDB:EOG4JQ2CF PhylomeDB:Q24167 ChiTaRS:sima GenomeRNAi:43580
NextBio:834672 Bgee:Q24167 GermOnline:CG7951 Uniprot:Q24167
Length = 1507
Score = 126 (49.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 144 VINKGQVLTHYYRLMNKNGGYTWVQSCATVVCSSKNADEQNIICVNYVISGREYENFIMD 203
V++KGQ T YR + K GGY W+ S AT+V Q+++CVNYVIS E ++ I
Sbjct: 373 VLSKGQGETSRYRFLGKYGGYCWILSQATIVYDKLKP--QSVVCVNYVISNLENKHEIYS 430
Query: 204 CCQL-------EDYIQQRGVKREEPSNNDPE 227
Q E + Q ++E DPE
Sbjct: 431 LAQQTAASEQKEQHHQAAETEKEPEKAADPE 461
Score = 72 (30.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 111 RSLDGFAFALGSDGRFLYISETVSIYLGLSQWQVINKGQVLTHY 154
+++DGF L +G Y+SE V YLG+++ + GQ + Y
Sbjct: 177 QTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTL--GQQIWEY 218
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 12 ILQVEMTGSSVFDYIHQADHTELAE 36
I +++ G +++Y HQ DH E+ E
Sbjct: 205 ITKIDTLGQQIWEYSHQCDHAEIKE 229
Score = 50 (22.7 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 88 RSFCIRMKSTLTKRG--CHFKSSGYR 111
R +R+K TLT RG + KS+ Y+
Sbjct: 256 RDLFVRLKCTLTSRGRSINIKSASYK 281
>UNIPROTKB|H0YI42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 PROSITE:PS50112
SMART:SM00091 GO:GO:0004871 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 Ensembl:ENST00000552874 Uniprot:H0YI42
Length = 132
Score = 103 (41.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 87 DRSFCIRMKSTLTKRGCHFKSSGYR 111
+RSF IRMKSTLTKRG H KSSGY+
Sbjct: 7 ERSFFIRMKSTLTKRGVHIKSSGYK 31
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 294 271 0.00098 114 3 11 23 0.41 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 96
No. of states in DFA: 612 (65 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.21u 0.12s 26.33t Elapsed: 00:00:01
Total cpu time: 26.22u 0.12s 26.34t Elapsed: 00:00:01
Start: Thu Aug 15 13:57:54 2013 End: Thu Aug 15 13:57:55 2013