BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17810
(62 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307182730|gb|EFN69854.1| Protein trachealess [Camponotus floridanus]
Length = 965
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/51 (96%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFS HGDPPWSRDGP PSKSVKG
Sbjct: 111 MLPLPAAITSQLDKASIIRLTISYLKLRDFSSHGDPPWSRDGPPPSKSVKG 161
>gi|307202142|gb|EFN81642.1| Protein trachealess [Harpegnathos saltator]
Length = 927
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/51 (94%), Positives = 48/51 (94%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFS HGDPPWSRDGP P KSVKG
Sbjct: 80 MLPLPAAITSQLDKASIIRLTISYLKLRDFSSHGDPPWSRDGPPPIKSVKG 130
>gi|270015606|gb|EFA12054.1| trachealess [Tribolium castaneum]
Length = 851
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGP P+K++K
Sbjct: 116 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPPPNKTLKA 166
>gi|189241974|ref|XP_967112.2| PREDICTED: similar to Bm trachealess [Tribolium castaneum]
Length = 820
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGP P+K++K
Sbjct: 87 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPPPNKTLKA 137
>gi|350424337|ref|XP_003493762.1| PREDICTED: protein trachealess-like isoform 2 [Bombus impatiens]
Length = 907
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS KG
Sbjct: 80 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGKG 130
>gi|340722623|ref|XP_003399703.1| PREDICTED: protein trachealess-like isoform 2 [Bombus terrestris]
Length = 907
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS KG
Sbjct: 80 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGKG 130
>gi|350424334|ref|XP_003493761.1| PREDICTED: protein trachealess-like isoform 1 [Bombus impatiens]
Length = 935
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS KG
Sbjct: 108 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGKG 158
>gi|340722621|ref|XP_003399702.1| PREDICTED: protein trachealess-like isoform 1 [Bombus terrestris]
Length = 990
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS KG
Sbjct: 163 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGKG 213
>gi|332027679|gb|EGI67747.1| Protein trachealess [Acromyrmex echinatior]
Length = 953
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/52 (94%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD-GPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFS HGDPPWSRD GP PSKSVKG
Sbjct: 78 MLPLPAAITSQLDKASIIRLTISYLKLRDFSSHGDPPWSRDGGPPPSKSVKG 129
>gi|345485710|ref|XP_001606407.2| PREDICTED: protein trachealess-like [Nasonia vitripennis]
Length = 681
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 48/50 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD P P+KSVK
Sbjct: 120 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDTPPPNKSVK 169
>gi|242025337|ref|XP_002433081.1| Neuronal PAS domain-containing protein, putative [Pediculus humanus
corporis]
gi|212518608|gb|EEB20343.1| Neuronal PAS domain-containing protein, putative [Pediculus humanus
corporis]
Length = 801
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 48/51 (94%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW RD P P+KS+KG
Sbjct: 90 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWQRDNPPPNKSLKG 140
>gi|328712552|ref|XP_001949586.2| PREDICTED: protein trachealess-like [Acyrthosiphon pisum]
Length = 964
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 50/53 (94%), Gaps = 1/53 (1%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGP-SPSKSVKGI 52
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+RDGP S SK++KG
Sbjct: 44 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRDGPQSASKNLKGT 96
>gi|357621488|gb|EHJ73300.1| trachealess [Danaus plexippus]
Length = 749
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 48/52 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGI 52
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD P SK++KG
Sbjct: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDTPPTSKTLKGT 52
>gi|383851623|ref|XP_003701331.1| PREDICTED: protein trachealess-like [Megachile rotundata]
Length = 985
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS K
Sbjct: 163 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGK 212
>gi|328787564|ref|XP_391937.3| PREDICTED: protein trachealess-like isoform 1 [Apis mellifera]
Length = 986
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS K
Sbjct: 163 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGK 212
>gi|380022833|ref|XP_003695240.1| PREDICTED: protein trachealess-like [Apis florea]
Length = 941
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLPAAITSQLDKASIIRLTISYLKLR+FSGHGDPPW+RDGP P+KS K
Sbjct: 163 MLPLPAAITSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGK 212
>gi|112984028|ref|NP_001036830.1| trachealess [Bombyx mori]
gi|2564053|dbj|BAA22946.1| Bm trachealess [Bombyx mori]
Length = 849
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 48/51 (94%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD P SK++KG
Sbjct: 97 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDPPPSSKALKG 147
>gi|405959134|gb|EKC25198.1| Protein trachealess [Crassostrea gigas]
Length = 890
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 46/51 (90%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRL+ISYLKLRDFSGHGDPPW+RD + KS KG
Sbjct: 40 LLPLPAAITSQLDKASIIRLSISYLKLRDFSGHGDPPWNRDHLTNGKSFKG 90
>gi|194746812|ref|XP_001955848.1| GF24890 [Drosophila ananassae]
gi|190623130|gb|EDV38654.1| GF24890 [Drosophila ananassae]
Length = 959
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|195435564|ref|XP_002065750.1| GK20151 [Drosophila willistoni]
gi|194161835|gb|EDW76736.1| GK20151 [Drosophila willistoni]
Length = 996
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 113 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 153
>gi|195583266|ref|XP_002081444.1| GD25707 [Drosophila simulans]
gi|194193453|gb|EDX07029.1| GD25707 [Drosophila simulans]
Length = 958
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|1155056|gb|AAA96754.1| trachealess [Drosophila melanogaster]
Length = 924
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 77 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 117
>gi|198467103|ref|XP_001354251.2| GA19928 [Drosophila pseudoobscura pseudoobscura]
gi|198149510|gb|EAL31304.2| GA19928 [Drosophila pseudoobscura pseudoobscura]
Length = 982
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 104 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 144
>gi|195135202|ref|XP_002012023.1| GI16736 [Drosophila mojavensis]
gi|193918287|gb|EDW17154.1| GI16736 [Drosophila mojavensis]
Length = 985
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 109 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 149
>gi|442629204|ref|NP_001261208.1| trachealess, isoform E [Drosophila melanogaster]
gi|440215072|gb|AGB93903.1| trachealess, isoform E [Drosophila melanogaster]
Length = 952
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|195375355|ref|XP_002046467.1| GJ12482 [Drosophila virilis]
gi|194153625|gb|EDW68809.1| GJ12482 [Drosophila virilis]
Length = 992
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 109 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 149
>gi|116007754|ref|NP_001036575.1| trachealess, isoform B [Drosophila melanogaster]
gi|113194869|gb|ABI31226.1| trachealess, isoform B [Drosophila melanogaster]
gi|381388785|gb|AFG26510.1| FI17826p1 [Drosophila melanogaster]
Length = 929
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|442629206|ref|NP_001261209.1| trachealess, isoform F [Drosophila melanogaster]
gi|440215073|gb|AGB93904.1| trachealess, isoform F [Drosophila melanogaster]
Length = 989
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 149 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 189
>gi|342672107|gb|AEL30808.1| FI13840p1 [Drosophila melanogaster]
Length = 929
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|442629208|ref|NP_001261210.1| trachealess, isoform G [Drosophila melanogaster]
gi|440215074|gb|AGB93905.1| trachealess, isoform G [Drosophila melanogaster]
Length = 923
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|320545371|ref|NP_001097461.2| trachealess, isoform C [Drosophila melanogaster]
gi|318069090|gb|ABW08426.2| trachealess, isoform C [Drosophila melanogaster]
Length = 966
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 149 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 189
>gi|24654763|ref|NP_523872.2| trachealess, isoform A [Drosophila melanogaster]
gi|7291970|gb|AAF47386.1| trachealess, isoform A [Drosophila melanogaster]
Length = 958
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|194864604|ref|XP_001971021.1| GG14662 [Drosophila erecta]
gi|190652804|gb|EDV50047.1| GG14662 [Drosophila erecta]
Length = 961
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|1173581|gb|AAA96257.1| bHLH-PAS protein [Drosophila melanogaster]
Length = 949
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 103 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 143
>gi|195012446|ref|XP_001983647.1| GH15456 [Drosophila grimshawi]
gi|193897129|gb|EDV95995.1| GH15456 [Drosophila grimshawi]
Length = 1029
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 109 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 149
>gi|159884115|gb|ABX00736.1| IP17239p [Drosophila melanogaster]
Length = 929
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|442629202|ref|NP_001261207.1| trachealess, isoform D [Drosophila melanogaster]
gi|391358202|sp|Q24119.4|TRH_DROME RecName: Full=Protein trachealess
gi|440215071|gb|AGB93902.1| trachealess, isoform D [Drosophila melanogaster]
Length = 1022
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|195336324|ref|XP_002034791.1| trachealess [Drosophila sechellia]
gi|194127884|gb|EDW49927.1| trachealess [Drosophila sechellia]
Length = 876
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|20151809|gb|AAM11264.1| RH17284p [Drosophila melanogaster]
Length = 902
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 85 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 125
>gi|195490113|ref|XP_002093007.1| GE21022 [Drosophila yakuba]
gi|194179108|gb|EDW92719.1| GE21022 [Drosophila yakuba]
Length = 958
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 152
>gi|195167721|ref|XP_002024681.1| GL22602 [Drosophila persimilis]
gi|194108086|gb|EDW30129.1| GL22602 [Drosophila persimilis]
Length = 1106
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 321 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 361
>gi|195066157|ref|XP_001996783.1| GH23748 [Drosophila grimshawi]
gi|193891620|gb|EDV90486.1| GH23748 [Drosophila grimshawi]
Length = 490
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 41/41 (100%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+
Sbjct: 109 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTRE 149
>gi|441595556|ref|XP_004087250.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Nomascus leucogenys]
Length = 819
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKGI
Sbjct: 65 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGI 118
>gi|358420879|ref|XP_003584753.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Bos
taurus]
Length = 139
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKGI
Sbjct: 39 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGI 92
>gi|41281831|ref|NP_775182.1| neuronal PAS domain-containing protein 3 isoform 3 [Homo sapiens]
gi|27372857|dbj|BAC53754.1| NPAS3 variant [Homo sapiens]
gi|148921820|gb|AAI46318.1| Neuronal PAS domain protein 3 [synthetic construct]
Length = 920
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKGI
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGI 100
>gi|449274759|gb|EMC83837.1| Neuronal PAS domain-containing protein 3, partial [Columba livia]
Length = 85
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG+
Sbjct: 31 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGM 84
>gi|449504391|ref|XP_002199739.2| PREDICTED: neuronal PAS domain-containing protein 3 [Taeniopygia
guttata]
Length = 986
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 153 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 205
>gi|395503613|ref|XP_003756158.1| PREDICTED: neuronal PAS domain-containing protein 3 [Sarcophilus
harrisii]
Length = 876
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 66 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 118
>gi|126281959|ref|XP_001363671.1| PREDICTED: neuronal PAS domain-containing protein 3 isoform 2
[Monodelphis domestica]
Length = 938
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>gi|410962132|ref|XP_003987629.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Felis catus]
Length = 811
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 85 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 137
>gi|296475377|tpg|DAA17492.1| TPA: neuronal PAS domain protein 3 [Bos taurus]
Length = 933
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 76 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 128
>gi|426248830|ref|XP_004018161.1| PREDICTED: neuronal PAS domain-containing protein 3 [Ovis aries]
Length = 906
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 111 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 163
>gi|154090947|ref|NP_038808.2| neuronal PAS domain-containing protein 3 [Mus musculus]
gi|189442119|gb|AAI67248.1| Neuronal PAS domain protein 3 [synthetic construct]
Length = 925
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>gi|30172456|gb|AAO17043.1| neuronal PAS3 transcript variant 1 [Homo sapiens]
Length = 901
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 99
>gi|38605073|sp|Q9QZQ0.1|NPAS3_MOUSE RecName: Full=Neuronal PAS domain-containing protein 3;
Short=Neuronal PAS3; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP6; AltName:
Full=Member of PAS protein 6
gi|6492334|gb|AAF14283.1|AF173871_1 neuronal PAS3 [Mus musculus]
Length = 925
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>gi|11545847|ref|NP_071406.1| neuronal PAS domain-containing protein 3 isoform 2 [Homo sapiens]
gi|11415003|gb|AAG35180.1|AF164438_1 basic-helix-loop-helix-PAS protein [Homo sapiens]
Length = 901
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 99
>gi|444722496|gb|ELW63188.1| Neuronal PAS domain-containing protein 3 [Tupaia chinensis]
Length = 153
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNLQ 57
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK L+
Sbjct: 68 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKACRRALR 126
>gi|348572221|ref|XP_003471892.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Cavia porcellus]
Length = 929
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>gi|345306264|ref|XP_001512327.2| PREDICTED: neuronal PAS domain-containing protein 3-like
[Ornithorhynchus anatinus]
Length = 633
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 74 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 126
>gi|118404610|ref|NP_001072647.1| neuronal PAS domain protein 3 [Xenopus (Silurana) tropicalis]
gi|115312943|gb|AAI23930.1| neuronal PAS domain protein 3 [Xenopus (Silurana) tropicalis]
Length = 899
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR--DGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+G GDPPW+ +GP P+ SVK I
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFAGQGDPPWNLRIEGPPPNTSVKVI 100
>gi|291222897|ref|XP_002731454.1| PREDICTED: neuronal PAS domain protein 3-like [Saccoglossus
kowalevskii]
Length = 962
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSV 49
MLPLPAAITSQLDKASIIRLTISYL++RDF+ GDPPW R+GP P+ SV
Sbjct: 67 MLPLPAAITSQLDKASIIRLTISYLRMRDFTTQGDPPWQTLREGPPPNTSV 117
>gi|348527488|ref|XP_003451251.1| PREDICTED: neuronal PAS domain-containing protein 3-like
[Oreochromis niloticus]
Length = 1273
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR--DGPSPSKSVKGI 52
MLPLP AITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 360 MLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAI 413
>gi|432941069|ref|XP_004082814.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Oryzias
latipes]
Length = 946
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR--DGPSPSKSVKGI 52
MLPLP AITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 51 MLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAI 104
>gi|327263651|ref|XP_003216631.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Anolis
carolinensis]
Length = 903
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 69 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 122
>gi|397501192|ref|XP_003821275.1| PREDICTED: neuronal PAS domain-containing protein 3 [Pan paniscus]
Length = 841
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 65 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 118
>gi|363734502|ref|XP_421232.3| PREDICTED: neuronal PAS domain-containing protein 3 [Gallus gallus]
Length = 1034
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 203 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 256
>gi|338717972|ref|XP_003363735.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Equus caballus]
Length = 828
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 66 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 119
>gi|390468991|ref|XP_002753842.2| PREDICTED: neuronal PAS domain-containing protein 3 isoform 1
[Callithrix jacchus]
Length = 939
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 137
>gi|426376664|ref|XP_004055115.1| PREDICTED: neuronal PAS domain-containing protein 3 [Gorilla
gorilla gorilla]
Length = 878
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 137
>gi|260064034|ref|NP_001158221.1| neuronal PAS domain-containing protein 3 isoform 1 [Homo sapiens]
gi|38604888|sp|Q8IXF0.1|NPAS3_HUMAN RecName: Full=Neuronal PAS domain-containing protein 3;
Short=Neuronal PAS3; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP6; AltName:
Full=Class E basic helix-loop-helix protein 12;
Short=bHLHe12; AltName: Full=Member of PAS protein 6;
AltName: Full=PAS domain-containing protein 6
gi|27372861|dbj|BAC53756.1| NPAS3 [Homo sapiens]
Length = 933
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 77 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 130
>gi|403264844|ref|XP_003924677.1| PREDICTED: neuronal PAS domain-containing protein 3 [Saimiri
boliviensis boliviensis]
Length = 841
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 149 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 202
>gi|332842053|ref|XP_509895.3| PREDICTED: neuronal PAS domain-containing protein 3 [Pan
troglodytes]
Length = 937
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 137
>gi|359077866|ref|XP_002696766.2| PREDICTED: neuronal PAS domain-containing protein 3 [Bos taurus]
Length = 935
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 76 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 129
>gi|297297656|ref|XP_001108628.2| PREDICTED: neuronal PAS domain-containing protein 3 [Macaca
mulatta]
Length = 936
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 137
>gi|344273381|ref|XP_003408500.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Loxodonta africana]
Length = 915
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 65 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 118
>gi|402875930|ref|XP_003901744.1| PREDICTED: neuronal PAS domain-containing protein 3 [Papio anubis]
Length = 961
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 107 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 160
>gi|392348827|ref|XP_003750208.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Rattus norvegicus]
Length = 931
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 88 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 141
>gi|440903756|gb|ELR54370.1| Neuronal PAS domain-containing protein 3, partial [Bos grunniens
mutus]
Length = 919
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 61 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 114
>gi|395838298|ref|XP_003792053.1| PREDICTED: neuronal PAS domain-containing protein 3 [Otolemur
garnettii]
Length = 915
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 65 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 118
>gi|119586334|gb|EAW65930.1| neuronal PAS domain protein 3 [Homo sapiens]
Length = 903
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 100
>gi|113197972|gb|AAI20886.1| Npas3 protein [Mus musculus]
Length = 893
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 54 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 107
>gi|260064030|ref|NP_001159365.1| neuronal PAS domain-containing protein 3 isoform 4 [Homo sapiens]
gi|12328445|dbj|BAB21221.1| NPAS3 (MOP6) [Homo sapiens]
gi|208966854|dbj|BAG73441.1| neuronal PAS domain protein 3 [synthetic construct]
Length = 903
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 47 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 100
>gi|395745779|ref|XP_002824709.2| PREDICTED: neuronal PAS domain-containing protein 3 [Pongo abelii]
Length = 962
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 107 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 160
>gi|380805789|gb|AFE74770.1| neuronal PAS domain-containing protein 3 isoform 4, partial
[Macaca mulatta]
Length = 655
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 38 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 91
>gi|345803910|ref|XP_003435125.1| PREDICTED: neuronal PAS domain-containing protein 3 [Canis lupus
familiaris]
Length = 910
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 65 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 118
>gi|281351055|gb|EFB26639.1| hypothetical protein PANDA_020964 [Ailuropoda melanoleuca]
Length = 82
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVK 50
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK
Sbjct: 31 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVK 82
>gi|47207296|emb|CAF93551.1| unnamed protein product [Tetraodon nigroviridis]
Length = 82
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVK 50
MLPLP AITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK
Sbjct: 31 MLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVK 82
>gi|443698780|gb|ELT98590.1| hypothetical protein CAPTEDRAFT_184580, partial [Capitella
teleta]
Length = 667
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 38/41 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLP AITSQLDKASIIRLTIS+LKL+DFS HGDPPW RD
Sbjct: 1 MLPLPGAITSQLDKASIIRLTISFLKLKDFSCHGDPPWHRD 41
>gi|242000222|ref|XP_002434754.1| neuronal pas domain protein, putative [Ixodes scapularis]
gi|215498084|gb|EEC07578.1| neuronal pas domain protein, putative [Ixodes scapularis]
Length = 469
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 47/67 (70%), Gaps = 7/67 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD------GPSPSKS-VKGIP 53
MLPLPAAITSQLDKASIIRLTISYLKLRDFS HG PW RD SPSK+ +K
Sbjct: 247 MLPLPAAITSQLDKASIIRLTISYLKLRDFSQHGYRPWLRDQGASAAATSPSKTQLKAAR 306
Query: 54 HNLQEGQ 60
L GQ
Sbjct: 307 TPLSRGQ 313
>gi|5102588|emb|CAB45154.1| hypothetical protein, similar to (U77968) neuronal PAS domain
protein 1 [Homo sapiens]
Length = 199
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
L L AAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 20 LLLSAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 72
>gi|326674072|ref|XP_687851.4| PREDICTED: neuronal PAS domain-containing protein 3 [Danio rerio]
Length = 843
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNL 56
MLPLP AITSQLDKASIIRLTISYL +R F+ GDPPWS +G + V+ H+L
Sbjct: 135 MLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGENNCSKVRRTSHSL 192
>gi|347963073|ref|XP_311103.5| AGAP000056-PA [Anopheles gambiae str. PEST]
gi|333467373|gb|EAA06130.5| AGAP000056-PA [Anopheles gambiae str. PEST]
Length = 604
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKL++FS +G P W +D
Sbjct: 78 MLPLPAAITSQLDKASIIRLTISYLKLKEFSENGVPSWCKD 118
>gi|26892114|gb|AAN84555.1| trachealess [Artemia franciscana]
Length = 494
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLP ITSQLDKASIIRLTI++LKL++F+ +GDPPW+ G K +K
Sbjct: 34 MLPLPPQITSQLDKASIIRLTIAFLKLKEFTSNGDPPWNNMGSGTGKGLK 83
>gi|410910006|ref|XP_003968481.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Takifugu
rubripes]
Length = 764
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNL 56
MLPLP AITSQLDKAS+IRLTISYL +R F+ GDPPWS +G S V+ H+L
Sbjct: 62 MLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCSKVRRSSHSL 119
>gi|157128236|ref|XP_001661358.1| neuronal pas domain protein [Aedes aegypti]
gi|108882245|gb|EAT46470.1| AAEL002343-PA [Aedes aegypti]
Length = 599
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKL++FS +G P W+++
Sbjct: 98 MLPLPAAITSQLDKASIIRLTISYLKLKEFSENGVPSWNKE 138
>gi|157106764|ref|XP_001649472.1| neuronal pas domain protein [Aedes aegypti]
gi|108868781|gb|EAT33006.1| AAEL014740-PA [Aedes aegypti]
Length = 599
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKL++FS +G P W+++
Sbjct: 98 MLPLPAAITSQLDKASIIRLTISYLKLKEFSENGVPSWNKE 138
>gi|170040698|ref|XP_001848127.1| trachealess [Culex quinquefasciatus]
gi|167864310|gb|EDS27693.1| trachealess [Culex quinquefasciatus]
Length = 654
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKL++FS +G P W ++
Sbjct: 145 MLPLPAAITSQLDKASIIRLTISYLKLKEFSENGVPSWCKE 185
>gi|238625263|gb|ACR47966.1| trachealess [Artemia sinica]
Length = 772
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
MLPLP ITSQLDKASIIRLTI++LKL++F+ +GDPPW+ G K +K
Sbjct: 82 MLPLPPQITSQLDKASIIRLTIAFLKLKEFTSNGDPPWNNMGSGTGKGLK 131
>gi|348526754|ref|XP_003450884.1| PREDICTED: neuronal PAS domain-containing protein 1-like
[Oreochromis niloticus]
Length = 811
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNL 56
MLPLP AITSQLDKAS+IRLTISYL +R F+ GDPPWS +G S V+ H+L
Sbjct: 59 MLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSSHSL 116
>gi|432892207|ref|XP_004075706.1| PREDICTED: neuronal PAS domain-containing protein 1-like [Oryzias
latipes]
Length = 820
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 34/39 (87%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS 39
MLPLP AITSQLDKAS+IRLTISYL +R F+ GDPPWS
Sbjct: 62 MLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWS 100
>gi|312381665|gb|EFR27363.1| hypothetical protein AND_05980 [Anopheles darlingi]
Length = 701
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLPAAITSQLDKASIIRLTISYLKL++FS G P W ++
Sbjct: 78 MLPLPAAITSQLDKASIIRLTISYLKLKEFSETGVPSWCKE 118
>gi|321461465|gb|EFX72497.1| hypothetical protein DAPPUDRAFT_59022 [Daphnia pulex]
Length = 406
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPLP AITSQLDKASIIRLTIS+L+L+DFS +GDP W ++
Sbjct: 30 MLPLPPAITSQLDKASIIRLTISFLRLKDFSSNGDPAWIKE 70
>gi|334328713|ref|XP_001373287.2| PREDICTED: neuronal PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 611
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 36/38 (94%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS 39
LPLP+AITSQLDKASI+RL+I+YL+LRDF+ GDPPW+
Sbjct: 63 LPLPSAITSQLDKASIVRLSITYLRLRDFAALGDPPWT 100
>gi|170040702|ref|XP_001848129.1| neuronal pas domain protein [Culex quinquefasciatus]
gi|167864312|gb|EDS27695.1| neuronal pas domain protein [Culex quinquefasciatus]
Length = 642
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
MLPL AAIT QLDKASIIRLT+SYLKL++FS G P WSR+
Sbjct: 211 MLPLEAAITGQLDKASIIRLTMSYLKLKEFSEQGVPTWSRE 251
>gi|390359228|ref|XP_003729433.1| PREDICTED: uncharacterized protein LOC578593 isoform 1
[Strongylocentrotus purpuratus]
Length = 928
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 32/38 (84%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLPAAITSQLDKASIIRLTI YL +R F GDPPW
Sbjct: 69 LLPLPAAITSQLDKASIIRLTIGYLHMRHFCIQGDPPW 106
>gi|390359226|ref|XP_783845.2| PREDICTED: uncharacterized protein LOC578593 isoform 2
[Strongylocentrotus purpuratus]
Length = 947
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 32/38 (84%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLPAAITSQLDKASIIRLTI YL +R F GDPPW
Sbjct: 88 LLPLPAAITSQLDKASIIRLTIGYLHMRHFCIQGDPPW 125
>gi|156392022|ref|XP_001635848.1| predicted protein [Nematostella vectensis]
gi|156222946|gb|EDO43785.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 4/47 (8%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSK 47
+LPLPAAITSQLDKASI+RLTISYL +R+F+G+ + DG S SK
Sbjct: 28 LLPLPAAITSQLDKASIVRLTISYLSMREFAGNCNT----DGSSSSK 70
>gi|431909210|gb|ELK12800.1| Neuronal PAS domain-containing protein 1 [Pteropus alecto]
Length = 594
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSV 49
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P S+
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRASGPPASL 119
>gi|332257214|ref|XP_003277706.1| PREDICTED: neuronal PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 587
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|301775350|ref|XP_002923107.1| PREDICTED: neuronal PAS domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 568
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 64 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 108
>gi|22027482|ref|NP_002508.2| neuronal PAS domain-containing protein 1 [Homo sapiens]
gi|59803108|sp|Q99742.2|NPAS1_HUMAN RecName: Full=Neuronal PAS domain-containing protein 1;
Short=Neuronal PAS1; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP5; AltName:
Full=Class E basic helix-loop-helix protein 11;
Short=bHLHe11; AltName: Full=Member of PAS protein 5;
AltName: Full=PAS domain-containing protein 5
gi|12313662|dbj|BAB21098.1| neuronal PAS domain protein 1 (NPAS1) [Homo sapiens]
gi|24660361|gb|AAH39016.1| NPAS1 protein [Homo sapiens]
gi|119577858|gb|EAW57454.1| neuronal PAS domain protein 1 [Homo sapiens]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|332856339|ref|XP_001168597.2| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|332856341|ref|XP_001168613.2| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|410215168|gb|JAA04803.1| neuronal PAS domain protein 1 [Pan troglodytes]
gi|410254662|gb|JAA15298.1| neuronal PAS domain protein 1 [Pan troglodytes]
gi|410301982|gb|JAA29591.1| neuronal PAS domain protein 1 [Pan troglodytes]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|355703698|gb|EHH30189.1| hypothetical protein EGK_10805 [Macaca mulatta]
Length = 627
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|297705266|ref|XP_002829499.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Pongo abelii]
gi|395751430|ref|XP_003779257.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Pongo abelii]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|444730780|gb|ELW71154.1| Neuronal PAS domain-containing protein 1 [Tupaia chinensis]
Length = 646
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|281353690|gb|EFB29274.1| hypothetical protein PANDA_012172 [Ailuropoda melanoleuca]
Length = 549
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 21 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 65
>gi|73948103|ref|XP_541539.2| PREDICTED: neuronal PAS domain-containing protein 1 [Canis lupus
familiaris]
Length = 594
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 72 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRATGP 116
>gi|355761851|gb|EHH61859.1| hypothetical protein EGM_19993, partial [Macaca fascicularis]
Length = 534
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|426389352|ref|XP_004061087.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426389354|ref|XP_004061088.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|335289857|ref|XP_003127301.2| PREDICTED: neuronal PAS domain-containing protein 1-like [Sus
scrofa]
Length = 594
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSV 49
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P S+
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRTAGPPASL 119
>gi|109125286|ref|XP_001112801.1| PREDICTED: neuronal PAS domain-containing protein 1-like isoform 3
[Macaca mulatta]
Length = 591
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|402906063|ref|XP_003915826.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Papio anubis]
gi|402906065|ref|XP_003915827.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Papio anubis]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|397493270|ref|XP_003817533.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1 [Pan paniscus]
Length = 590
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 108
>gi|296234201|ref|XP_002807896.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1-like [Callithrix jacchus]
Length = 592
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|348557869|ref|XP_003464741.1| PREDICTED: neuronal PAS domain-containing protein 1 [Cavia
porcellus]
Length = 539
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 67 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 104
>gi|410982742|ref|XP_003997707.1| PREDICTED: neuronal PAS domain-containing protein 1 [Felis catus]
Length = 599
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 77 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 121
>gi|157819069|ref|NP_001100949.1| neuronal PAS domain-containing protein 1 [Rattus norvegicus]
gi|149056888|gb|EDM08319.1| neuronal PAS domain protein 1 (predicted) [Rattus norvegicus]
Length = 595
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 108
>gi|300798547|ref|NP_001179586.1| neuronal PAS domain-containing protein 1 [Bos taurus]
gi|296477577|tpg|DAA19692.1| TPA: neuronal PAS domain protein 1-like [Bos taurus]
Length = 587
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 64 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 101
>gi|6679100|ref|NP_032744.1| neuronal PAS domain-containing protein 1 [Mus musculus]
gi|3914159|sp|P97459.1|NPAS1_MOUSE RecName: Full=Neuronal PAS domain-containing protein 1;
Short=Neuronal PAS1
gi|1840054|gb|AAB47247.1| neuronal PAS1 [Mus musculus]
gi|124298116|gb|AAI32114.1| Neuronal PAS domain protein 1 [Mus musculus]
gi|148710145|gb|EDL42091.1| neuronal PAS domain protein 1 [Mus musculus]
gi|187953721|gb|AAI37864.1| Neuronal PAS domain protein 1 [Mus musculus]
Length = 594
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 108
>gi|395854216|ref|XP_003799594.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Otolemur garnettii]
gi|395854218|ref|XP_003799595.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Otolemur garnettii]
Length = 591
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW +P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFATLGAPPWGLRATAP 115
>gi|344269377|ref|XP_003406529.1| PREDICTED: neuronal PAS domain-containing protein 1-like [Loxodonta
africana]
Length = 571
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 108
>gi|426243059|ref|XP_004015382.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1 [Ovis aries]
Length = 549
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW
Sbjct: 64 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPW 101
>gi|351697945|gb|EHB00864.1| Neuronal PAS domain-containing protein 1 [Heterocephalus glaber]
Length = 552
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 38
+LPLP AI+SQLDKASI+RL+++YL LR F+ G PPW
Sbjct: 67 LLPLPGAISSQLDKASIVRLSVTYLPLRRFAALGAPPW 104
>gi|1840056|gb|AAB47248.1| neuronal PAS1 [Homo sapiens]
Length = 590
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+ QLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISIQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>gi|47225041|emb|CAF97456.1| unnamed protein product [Tetraodon nigroviridis]
Length = 800
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNL 56
+L P + QLDKAS+IRLTISYL +R F+ GDPPWS +G S V+ H+L
Sbjct: 23 LLAKPPTLPCQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCSKVRRSSHSL 80
>gi|410931985|ref|XP_003979375.1| PREDICTED: single-minded homolog 2-like [Takifugu rubripes]
Length = 694
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSP 45
+LPLPAAITSQLDKASIIRLT SYLK+R F G GD G SP
Sbjct: 26 LLPLPAAITSQLDKASIIRLTSSYLKMRTFFPDGLGDGWGHSTGYSP 72
>gi|351698817|gb|EHB01736.1| Single-minded-like protein 2 [Heterocephalus glaber]
Length = 689
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD----GPSPSKSVK 50
+LPLP+AITSQLDKASIIRLT SYLK+R G+ R+ GP P++ ++
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGEAAGGRERWGPGPRPTRELE 79
>gi|345494448|ref|XP_001601655.2| PREDICTED: hypothetical protein LOC100117407 [Nasonia vitripennis]
Length = 815
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGD-----PPWSRDGPSPSKSV 49
+LPLPAAITSQLDKAS+IRLT SYLKLR+ G GD PP + G + K +
Sbjct: 167 LLPLPAAITSQLDKASVIRLTTSYLKLRNLFPDGLGDAWGAAPPLNHPGEATIKEL 222
>gi|242005711|ref|XP_002423706.1| single-minded, putative [Pediculus humanus corporis]
gi|212506882|gb|EEB10968.1| single-minded, putative [Pediculus humanus corporis]
Length = 558
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSK----SVKGIPH 54
+LPLP+AITSQLDKASIIRLT SYLK+R F G GD W P P+ S+K +
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRHFFPDGLGD-AWGA-APPPNNPRESSIKELGS 83
Query: 55 NLQEGQD 61
NL + D
Sbjct: 84 NLLQNLD 90
>gi|47223798|emb|CAF98568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/30 (86%), Positives = 28/30 (93%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLPAAITSQLDKASIIRLT SYLK+R F
Sbjct: 26 LLPLPAAITSQLDKASIIRLTSSYLKMRAF 55
>gi|307198404|gb|EFN79346.1| Single-minded-like protein 1 [Harpegnathos saltator]
Length = 774
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLPAAIT+QLDKASIIRLT SYLK+R HG
Sbjct: 109 LLPLPAAITTQLDKASIIRLTTSYLKMRAVFPHG 142
>gi|443702124|gb|ELU00285.1| hypothetical protein CAPTEDRAFT_165634, partial [Capitella
teleta]
Length = 487
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLPAAITSQLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPAAITSQLDKASIIRLTTSYLKMR 53
>gi|332229288|ref|XP_003263823.1| PREDICTED: single-minded homolog 2 [Nomascus leucogenys]
Length = 538
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPMDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|296490867|tpg|DAA32980.1| TPA: single-minded homolog 2 long-like [Bos taurus]
Length = 135
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD-----PPWSRDGPSPSKSVKG 51
+LPLP+AITSQLDKASIIRLT SYLK+R G+ P + GP+ S+S G
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGERPAGGRPGALGGPNRSRSSPG 81
>gi|307172407|gb|EFN63869.1| Single-minded-like protein 1 [Camponotus floridanus]
Length = 688
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLPAAIT+QLDKAS+IRLT SYLK+R HG
Sbjct: 26 LLPLPAAITTQLDKASVIRLTTSYLKMRAVFPHG 59
>gi|403271535|ref|XP_003927678.1| PREDICTED: single-minded homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403271537|ref|XP_003927679.1| PREDICTED: single-minded homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 563
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|397507000|ref|XP_003824000.1| PREDICTED: single-minded homolog 2 [Pan paniscus]
Length = 570
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|260835180|ref|XP_002612587.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
gi|229297965|gb|EEN68596.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
Length = 333
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPS 46
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W + S S
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-VWGQRSSSSS 72
>gi|355747376|gb|EHH51873.1| Class E basic helix-loop-helix protein 15, partial [Macaca
fascicularis]
Length = 525
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|355560292|gb|EHH16978.1| Class E basic helix-loop-helix protein 15, partial [Macaca
mulatta]
Length = 525
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|1408537|dbj|BAA12919.1| Sim [Homo sapiens]
Length = 247
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|410970001|ref|XP_003991479.1| PREDICTED: single-minded homolog 2 [Felis catus]
Length = 548
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|390478207|ref|XP_002807815.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2
[Callithrix jacchus]
Length = 651
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|157819625|ref|NP_001100578.1| single-minded homolog 2 [Rattus norvegicus]
gi|149017724|gb|EDL76725.1| single-minded 2 (predicted) [Rattus norvegicus]
Length = 656
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|241615|gb|AAB20787.1| basic-helix-loop-helix protein, bHLH=sim gene product [Drosophila
sp., embryonic CNS, Peptide Partial, 56 aa]
Length = 56
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD 29
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMRQ 54
>gi|118083884|ref|XP_416724.2| PREDICTED: single-minded homolog 2 [Gallus gallus]
Length = 764
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRIGP 72
>gi|354491783|ref|XP_003508034.1| PREDICTED: single-minded homolog 2 [Cricetulus griseus]
gi|344256479|gb|EGW12583.1| Single-minded-like 2 [Cricetulus griseus]
Length = 538
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|449283789|gb|EMC90383.1| Single-minded like protein 2 [Columba livia]
Length = 677
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRIGP 72
>gi|426219555|ref|XP_004003986.1| PREDICTED: single-minded homolog 2 [Ovis aries]
Length = 524
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|109065407|ref|XP_001085660.1| PREDICTED: single-minded homolog 2 [Macaca mulatta]
Length = 634
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|402862419|ref|XP_003895560.1| PREDICTED: single-minded homolog 2 [Papio anubis]
Length = 667
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|148671804|gb|EDL03751.1| single-minded homolog 2 (Drosophila) [Mus musculus]
Length = 657
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|426392995|ref|XP_004062819.1| PREDICTED: single-minded homolog 2 [Gorilla gorilla gorilla]
Length = 831
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|444727378|gb|ELW67876.1| Single-minded like protein 2 [Tupaia chinensis]
Length = 908
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 337 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 395
Query: 56 LQ 57
LQ
Sbjct: 396 LQ 397
>gi|344294716|ref|XP_003419062.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2-like
[Loxodonta africana]
Length = 677
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSMAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|119226237|ref|NP_035507.2| single-minded homolog 2 [Mus musculus]
gi|2498016|sp|Q61079.1|SIM2_MOUSE RecName: Full=Single-minded homolog 2; AltName: Full=SIM
transcription factor; Short=mSIM
gi|1377818|gb|AAB19098.1| sim transcription factor [Mus musculus]
gi|1754613|dbj|BAA11013.1| Sim2 [Mus musculus]
Length = 657
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|2599383|gb|AAB84099.1| single-minded 2 protein [Mus musculus]
Length = 657
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|1389638|dbj|BAA09700.1| mSim [Mus musculus]
gi|1586925|prf||2205234A Ah receptor nuclear translocator
Length = 657
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|348541611|ref|XP_003458280.1| PREDICTED: single-minded homolog 1-like [Oreochromis niloticus]
Length = 761
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|327268553|ref|XP_003219061.1| PREDICTED: single-minded homolog 2-like [Anolis carolinensis]
Length = 764
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRLGP 72
>gi|194239684|ref|NP_033664.2| single-minded homolog 2 short isoform [Homo sapiens]
gi|83405489|gb|AAI10445.1| Single-minded homolog 2 (Drosophila) [Homo sapiens]
gi|119630142|gb|EAX09737.1| single-minded homolog 2 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 570
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|395752789|ref|XP_002830715.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Pongo
abelii]
Length = 679
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|1213283|gb|AAA91202.1| SIM2 [Mus musculus]
Length = 742
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|281338859|gb|EFB14443.1| hypothetical protein PANDA_005294 [Ailuropoda melanoleuca]
Length = 525
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRPGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|2062419|gb|AAB62397.1| transcription factor SIM2 short form [Homo sapiens]
Length = 570
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|410916801|ref|XP_003971875.1| PREDICTED: single-minded homolog 1-like [Takifugu rubripes]
Length = 760
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|431901494|gb|ELK08516.1| Single-minded like protein 2 [Pteropus alecto]
Length = 633
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|3789859|gb|AAC67522.1| bHLH-PAS transcription factor Single-minded [Drosophila virilis]
Length = 59
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMR 53
>gi|348556425|ref|XP_003464022.1| PREDICTED: single-minded homolog 2-like [Cavia porcellus]
Length = 662
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|114684078|ref|XP_001169453.1| PREDICTED: single-minded homolog 2 isoform 2 [Pan troglodytes]
Length = 667
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|194226235|ref|XP_001916348.1| PREDICTED: single-minded homolog 2 [Equus caballus]
Length = 488
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGVGD-AWGQPSRAGP 72
>gi|321476879|gb|EFX87839.1| hypothetical protein DAPPUDRAFT_311851 [Daphnia pulex]
Length = 839
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKAS+IRLT SYLK+R
Sbjct: 26 MLPLPSAITSQLDKASVIRLTTSYLKMR 53
>gi|47224666|emb|CAG03650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 695
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|359062832|ref|XP_003585756.1| PREDICTED: single-minded homolog 2-like [Bos taurus]
Length = 228
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|332023709|gb|EGI63933.1| Single-minded-like protein 1 [Acromyrmex echinatior]
Length = 688
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLP AIT+QLDKASIIRLT SYLK+R HG
Sbjct: 26 LLPLPGAITTQLDKASIIRLTTSYLKMRAVFPHG 59
>gi|4827004|ref|NP_005060.1| single-minded homolog 2 long isoform [Homo sapiens]
gi|2851630|sp|Q14190.2|SIM2_HUMAN RecName: Full=Single-minded homolog 2; AltName: Full=Class E
basic helix-loop-helix protein 15; Short=bHLHe15
gi|2062417|gb|AAB62396.1| transcription factor SIM2 long form [Homo sapiens]
gi|6712195|dbj|BAA89433.1| single-minded 2 protein [Homo sapiens]
gi|119630143|gb|EAX09738.1| single-minded homolog 2 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 667
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|440892235|gb|ELR45515.1| Single-minded-like protein 2, partial [Bos grunniens mutus]
Length = 538
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|47191921|emb|CAF94705.1| unnamed protein product [Tetraodon nigroviridis]
Length = 73
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYL++R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTTSYLRMR 53
>gi|301624571|ref|XP_002941575.1| PREDICTED: single-minded homolog 2-like [Xenopus (Silurana)
tropicalis]
Length = 760
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPDGLGD-AWGHPSRMGP 72
>gi|158299100|ref|XP_319213.4| AGAP010058-PA [Anopheles gambiae str. PEST]
gi|157014206|gb|EAA14581.4| AGAP010058-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLP+AITSQLDKASIIRLT SYLK+R G
Sbjct: 33 LLPLPSAITSQLDKASIIRLTTSYLKMRQIFPEG 66
>gi|170048706|ref|XP_001870745.1| single-minded [Culex quinquefasciatus]
gi|167870723|gb|EDS34106.1| single-minded [Culex quinquefasciatus]
Length = 802
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPS 44
+LPLP+AITSQLDKASIIRLT SYLK+R G GD S+ PS
Sbjct: 55 LLPLPSAITSQLDKASIIRLTTSYLKMRQVFPEGLGDAWGSQHIPS 100
>gi|432898437|ref|XP_004076501.1| PREDICTED: single-minded homolog 2-like [Oryzias latipes]
Length = 683
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASIIRLTSSYLKMR 53
>gi|380793223|gb|AFE68487.1| neuronal PAS domain-containing protein 1, partial [Macaca mulatta]
Length = 105
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALG 104
>gi|194741162|ref|XP_001953058.1| GF17581 [Drosophila ananassae]
gi|190626117|gb|EDV41641.1| GF17581 [Drosophila ananassae]
Length = 746
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|328708224|ref|XP_001944204.2| PREDICTED: single-minded homolog 2-like isoform 1 [Acyrthosiphon
pisum]
Length = 561
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPS 44
+LPLPAAITSQLDKAS+IRLT SYLK+R +G GD W P+
Sbjct: 31 LLPLPAAITSQLDKASVIRLTTSYLKMRHVFPNGLGD-AWGAATPA 75
>gi|195449946|ref|XP_002072296.1| GK22407 [Drosophila willistoni]
gi|194168381|gb|EDW83282.1| GK22407 [Drosophila willistoni]
Length = 743
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|198451724|ref|XP_002137347.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
gi|198131616|gb|EDY67905.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
Length = 767
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|328708220|ref|XP_003243627.1| PREDICTED: single-minded homolog 2-like isoform 2 [Acyrthosiphon
pisum]
Length = 556
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPS 44
+LPLPAAITSQLDKAS+IRLT SYLK+R +G GD W P+
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMRHVFPNGLGD-AWGAATPA 70
>gi|227430297|ref|NP_001153057.1| single-minded homolog 1b [Danio rerio]
gi|226426422|gb|ACO54510.1| Sim1b long isoform [Danio rerio]
Length = 586
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTSSYLKMR 53
>gi|195037447|ref|XP_001990172.1| GH18379 [Drosophila grimshawi]
gi|193894368|gb|EDV93234.1| GH18379 [Drosophila grimshawi]
Length = 774
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|195395110|ref|XP_002056179.1| single-minded [Drosophila virilis]
gi|194142888|gb|EDW59291.1| single-minded [Drosophila virilis]
Length = 761
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|431838120|gb|ELK00052.1| Single-minded like protein 1 [Pteropus alecto]
Length = 355
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|347964476|ref|XP_311311.5| AGAP000773-PA [Anopheles gambiae str. PEST]
gi|333467549|gb|EAA06894.5| AGAP000773-PA [Anopheles gambiae str. PEST]
Length = 1045
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|328708222|ref|XP_003243628.1| PREDICTED: single-minded homolog 2-like isoform 3 [Acyrthosiphon
pisum]
Length = 593
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPS 44
+LPLPAAITSQLDKAS+IRLT SYLK+R +G GD W P+
Sbjct: 63 LLPLPAAITSQLDKASVIRLTTSYLKMRHVFPNGLGD-AWGAATPA 107
>gi|195145848|ref|XP_002013902.1| GL24392 [Drosophila persimilis]
gi|194102845|gb|EDW24888.1| GL24392 [Drosophila persimilis]
Length = 764
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|195108655|ref|XP_001998908.1| GI23369 [Drosophila mojavensis]
gi|193915502|gb|EDW14369.1| GI23369 [Drosophila mojavensis]
Length = 779
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|345795277|ref|XP_849519.2| PREDICTED: single-minded homolog 2 isoform 1 [Canis lupus
familiaris]
Length = 559
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W R GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPCRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>gi|270001312|gb|EEZ97759.1| hypothetical protein TcasGA2_TC016204 [Tribolium castaneum]
Length = 438
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGD 35
+LPLPAAITSQLDKAS+IRLT SYLK+R G GD
Sbjct: 223 LLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGD 259
>gi|194901552|ref|XP_001980316.1| GG19445 [Drosophila erecta]
gi|190652019|gb|EDV49274.1| GG19445 [Drosophila erecta]
Length = 698
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|442618832|ref|NP_001262528.1| single-minded, isoform D [Drosophila melanogaster]
gi|440217378|gb|AGB95910.1| single-minded, isoform D [Drosophila melanogaster]
Length = 672
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMR 53
>gi|28571685|ref|NP_524340.2| single-minded, isoform A [Drosophila melanogaster]
gi|21744281|gb|AAM76199.1| RE54280p [Drosophila melanogaster]
gi|28381286|gb|AAF54902.3| single-minded, isoform A [Drosophila melanogaster]
Length = 688
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|31077159|sp|P05709.3|SIM_DROME RecName: Full=Protein single-minded
Length = 697
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|327261480|ref|XP_003215558.1| PREDICTED: single-minded homolog 1-like [Anolis carolinensis]
Length = 769
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|220942606|gb|ACL83846.1| sim-PA [synthetic construct]
Length = 689
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|442618830|ref|NP_001262527.1| single-minded, isoform C [Drosophila melanogaster]
gi|440217377|gb|AGB95909.1| single-minded, isoform C [Drosophila melanogaster]
Length = 675
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 37 LLPLPAAITSQLDKASVIRLTTSYLKMR 64
>gi|45551885|ref|NP_731771.3| single-minded, isoform B [Drosophila melanogaster]
gi|45446472|gb|AAN14343.3| single-minded, isoform B [Drosophila melanogaster]
Length = 664
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMR 53
>gi|194663812|ref|XP_001789154.1| PREDICTED: single-minded homolog 2 [Bos taurus]
Length = 660
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRAGP 72
>gi|120974097|gb|ABM46637.1| SIM1 [Gorilla gorilla]
gi|121222039|gb|ABM47603.1| SIM1 [Saguinus labiatus]
gi|122053839|gb|ABM65899.1| SIM1 [Ateles geoffroyi]
gi|122934873|gb|ABM68177.1| SIM1 [Lagothrix lagotricha]
gi|124054139|gb|ABM89257.1| SIM1 [Pongo pygmaeus]
Length = 58
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|195571241|ref|XP_002103612.1| GD18883 [Drosophila simulans]
gi|194199539|gb|EDX13115.1| GD18883 [Drosophila simulans]
Length = 697
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMR 77
>gi|3769480|gb|AAC64519.1| single-minded protein [Drosophila melanogaster]
Length = 643
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMR 53
>gi|1088451|dbj|BAA07906.1| Sim protein [Homo sapiens]
Length = 58
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|149640516|ref|XP_001506044.1| PREDICTED: single-minded homolog 1 [Ornithorhynchus anatinus]
Length = 764
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|301605109|ref|XP_002932187.1| PREDICTED: single-minded homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 763
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|360044431|emb|CCD81979.1| putative single-minded [Schistosoma mansoni]
Length = 79
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPLP+AITSQLDKASIIRLT SYLK+R +G
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKIRTIFPNG 59
>gi|189241710|ref|XP_967930.2| PREDICTED: similar to Single minded [Tribolium castaneum]
Length = 521
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPAAITSQLDKASVIRLTTSYLKMR 53
>gi|126310365|ref|XP_001367899.1| PREDICTED: single-minded homolog 1 [Monodelphis domestica]
Length = 765
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|395518589|ref|XP_003763442.1| PREDICTED: single-minded homolog 2 [Sarcophilus harrisii]
Length = 764
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|158465|gb|AAA28900.1| sim nuclear protein, partial [Drosophila melanogaster]
Length = 655
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPAAITSQLDKAS+IRLT SYLK+R
Sbjct: 8 LLPLPAAITSQLDKASVIRLTTSYLKMR 35
>gi|395534668|ref|XP_003769362.1| PREDICTED: single-minded homolog 1 [Sarcophilus harrisii]
Length = 765
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|444725314|gb|ELW65884.1| Single-minded like protein 1 [Tupaia chinensis]
Length = 766
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|402867751|ref|XP_003897999.1| PREDICTED: single-minded homolog 1 [Papio anubis]
Length = 766
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|297747308|ref|NP_001166056.2| single-minded homolog 1 [Sus scrofa]
gi|297655327|gb|ADC53306.2| single-minded 1 protein [Sus scrofa]
Length = 766
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|410959734|ref|XP_003986456.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 1 [Felis
catus]
Length = 760
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|355561927|gb|EHH18559.1| hypothetical protein EGK_15194 [Macaca mulatta]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|301773192|ref|XP_002922016.1| PREDICTED: single-minded homolog 1-like [Ailuropoda melanoleuca]
gi|281347050|gb|EFB22634.1| hypothetical protein PANDA_010941 [Ailuropoda melanoleuca]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|397507866|ref|XP_003824402.1| PREDICTED: single-minded homolog 1 [Pan paniscus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|395851422|ref|XP_003798255.1| PREDICTED: single-minded homolog 1 [Otolemur garnettii]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|296198859|ref|XP_002746908.1| PREDICTED: single-minded homolog 1 [Callithrix jacchus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|351705699|gb|EHB08618.1| Single-minded-like protein 1 [Heterocephalus glaber]
Length = 754
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|332218557|ref|XP_003258422.1| PREDICTED: single-minded homolog 1 [Nomascus leucogenys]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|297678768|ref|XP_002817234.1| PREDICTED: single-minded homolog 1 [Pongo abelii]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|224048380|ref|XP_002196673.1| PREDICTED: single-minded homolog 1 [Taeniopygia guttata]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|109072171|ref|XP_001086054.1| PREDICTED: single-minded homolog 1 [Macaca mulatta]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|21614542|ref|NP_005059.2| single-minded homolog 1 [Homo sapiens]
gi|426354083|ref|XP_004044499.1| PREDICTED: single-minded homolog 1 [Gorilla gorilla gorilla]
gi|109940166|sp|P81133.2|SIM1_HUMAN RecName: Full=Single-minded homolog 1; AltName: Full=Class E
basic helix-loop-helix protein 14; Short=bHLHe14
gi|108752102|gb|AAI11932.1| SIM1 protein [synthetic construct]
gi|110645561|gb|AAI18501.1| SIM1 protein [synthetic construct]
gi|119568836|gb|EAW48451.1| single-minded homolog 1 (Drosophila) [Homo sapiens]
gi|307684428|dbj|BAJ20254.1| single-minded homolog 1 [synthetic construct]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|355748775|gb|EHH53258.1| hypothetical protein EGM_13864 [Macaca fascicularis]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|126325353|ref|XP_001374323.1| PREDICTED: single-minded homolog 2 [Monodelphis domestica]
Length = 761
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|125490345|ref|NP_001074957.1| single-minded homolog 1 [Pan troglodytes]
gi|146325729|sp|A2T6X9.1|SIM1_PANTR RecName: Full=Single-minded homolog 1
gi|124111115|gb|ABM91934.1| SIM1 [Pan troglodytes]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|300794523|ref|NP_001179901.1| single-minded homolog 1 [Bos taurus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|395856625|ref|XP_003800723.1| PREDICTED: single-minded homolog 2 [Otolemur garnettii]
Length = 614
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG-DPPW---SRDGPSPSKSVKGIPHNL 56
+LPLP+AITSQLDKASIIRLT SYLK+R G W SR GP S + + H L
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGEAWGQPSRAGPLDSVAKELGSHLL 85
Query: 57 Q 57
Q
Sbjct: 86 Q 86
>gi|344264587|ref|XP_003404373.1| PREDICTED: single-minded homolog 1 [Loxodonta africana]
Length = 765
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|296484106|tpg|DAA26221.1| TPA: single-minded homolog 1 [Bos taurus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|291396685|ref|XP_002714792.1| PREDICTED: single-minded homolog 1-like [Oryctolagus cuniculus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|73973608|ref|XP_539058.2| PREDICTED: single-minded homolog 1 isoform 1 [Canis lupus
familiaris]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|146325728|sp|A1YFY6.1|SIM1_PANPA RecName: Full=Single-minded homolog 1
gi|121483834|gb|ABM54211.1| SIM1 [Pan paniscus]
Length = 766
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|403261071|ref|XP_003922958.1| PREDICTED: single-minded homolog 1 [Saimiri boliviensis
boliviensis]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|157128070|ref|XP_001661300.1| single-minded [Aedes aegypti]
gi|108872709|gb|EAT36934.1| AAEL011013-PA [Aedes aegypti]
Length = 715
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|449271560|gb|EMC81866.1| Single-minded like protein 1 [Columba livia]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|354504925|ref|XP_003514523.1| PREDICTED: single-minded homolog 1 [Cricetulus griseus]
gi|344258879|gb|EGW14983.1| Single-minded-like 1 [Cricetulus griseus]
Length = 765
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|440900235|gb|ELR51420.1| Single-minded-like protein 1 [Bos grunniens mutus]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|149722832|ref|XP_001503954.1| PREDICTED: single-minded homolog 1 [Equus caballus]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|118088683|ref|XP_419817.2| PREDICTED: single-minded homolog 1 [Gallus gallus]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|153945860|ref|NP_035506.2| single-minded homolog 1 [Mus musculus]
gi|6175033|sp|Q61045.3|SIM1_MOUSE RecName: Full=Single-minded homolog 1; Short=mSIM1
gi|1651193|dbj|BAA11467.1| mSim1 [Mus musculus]
gi|3138809|dbj|BAA28270.1| mSim1 [Mus musculus]
gi|148673108|gb|EDL05055.1| single-minded homolog 1 (Drosophila) [Mus musculus]
gi|182887925|gb|AAI60194.1| Single-minded homolog 1 (Drosophila) [synthetic construct]
Length = 765
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|426234631|ref|XP_004011296.1| PREDICTED: single-minded homolog 1 [Ovis aries]
Length = 769
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|55730495|emb|CAH91969.1| hypothetical protein [Pongo abelii]
Length = 576
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|157821739|ref|NP_001101111.1| single-minded homolog 1 [Rattus norvegicus]
gi|149046904|gb|EDL99652.1| single-minded 1 (predicted) [Rattus norvegicus]
Length = 765
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|2952266|gb|AAC05481.1| single-minded protein 1 [Mus musculus]
Length = 765
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|1173854|gb|AAB01759.1| SIM1, partial [Gallus gallus]
Length = 87
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|348560534|ref|XP_003466068.1| PREDICTED: single-minded homolog 1-like [Cavia porcellus]
Length = 767
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|256085827|ref|XP_002579113.1| single-minded [Schistosoma mansoni]
Length = 58
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKIR 53
>gi|312378389|gb|EFR24977.1| hypothetical protein AND_10079 [Anopheles darlingi]
Length = 478
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGD 35
+LPLP+AITSQLDKASIIRLT SYLK+R G GD
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRQVFPEGLGD 62
>gi|224042489|ref|XP_002189239.1| PREDICTED: single-minded homolog 2 [Taeniopygia guttata]
Length = 766
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|115920139|ref|XP_782984.2| PREDICTED: uncharacterized protein LOC577676 [Strongylocentrotus
purpuratus]
Length = 820
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRD 41
+LPLP+AIT+QLDKASIIRLT SYLK+R G GD SR+
Sbjct: 26 LLPLPSAITTQLDKASIIRLTTSYLKMRALFPEGLGDSWGSRN 68
>gi|1213281|gb|AAA91201.1| SIM1 [Mus musculus]
Length = 695
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|348534841|ref|XP_003454910.1| PREDICTED: single-minded homolog 1-A-like [Oreochromis niloticus]
Length = 754
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|358332012|dbj|GAA50744.1| single-minded protein [Clonorchis sinensis]
Length = 838
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 241 LLPLPSAITSQLDKASIIRLTTSYLKIR 268
>gi|259013382|ref|NP_001158398.1| single-minded homolog 1 [Saccoglossus kowalevskii]
gi|90659999|gb|ABD97275.1| single-minded [Saccoglossus kowalevskii]
Length = 783
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKS 48
+LPLP+AITSQLDKASIIRL+ SYLK+R G GD W + P P S
Sbjct: 26 LLPLPSAITSQLDKASIIRLSTSYLKMRALFPEGLGD-SWGHN-PRPRNS 73
>gi|326670907|ref|XP_003199315.1| PREDICTED: single-minded homolog 2-like, partial [Danio rerio]
Length = 116
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|18859359|ref|NP_571911.1| single-minded homolog 2 [Danio rerio]
gi|18056651|gb|AAL58099.1|AF363019_1 single-minded protein [Danio rerio]
gi|40850960|gb|AAH65360.1| Single-minded homolog 2 (Drosophila) [Danio rerio]
Length = 585
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>gi|410904639|ref|XP_003965799.1| PREDICTED: single-minded homolog 1-A-like [Takifugu rubripes]
Length = 696
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYL++R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTSSYLRMR 53
>gi|357611544|gb|EHJ67534.1| putative Single minded [Danaus plexippus]
Length = 256
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSP 45
+LPLP+AITSQLDKAS+IRLT SYLK+R G GD W P P
Sbjct: 26 LLPLPSAITSQLDKASVIRLTTSYLKMRQVFPDGLGD-AWGAAPPPP 71
>gi|147904258|ref|NP_001079101.1| single-minded homolog 2 [Xenopus laevis]
gi|11993330|gb|AAG42690.1| single-minded [Xenopus laevis]
Length = 760
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGP 43
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPDGLGD-AWGHPSRIGP 72
>gi|90074851|dbj|BAE87099.1| Single minded [Achaearanea tepidariorum]
Length = 755
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPS 46
+LPLP AITSQLDKASIIRLT SYL++R+ G GD W P P+
Sbjct: 26 LLPLPPAITSQLDKASIIRLTTSYLRMREVFPKGLGD-SWGAAPPLPN 72
>gi|348541225|ref|XP_003458087.1| PREDICTED: hypothetical protein LOC100710360 [Oreochromis
niloticus]
Length = 1036
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGD 35
+LPLPAAITSQLDKASIIRLT SYL++R G GD
Sbjct: 26 LLPLPAAITSQLDKASIIRLTSSYLRMRSILPDGLGD 62
>gi|195500692|ref|XP_002097482.1| GE26246 [Drosophila yakuba]
gi|194183583|gb|EDW97194.1| GE26246 [Drosophila yakuba]
Length = 699
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLPA ITSQLDKAS+IRLT SYLK+R
Sbjct: 50 LLPLPATITSQLDKASVIRLTTSYLKMR 77
>gi|405978067|gb|EKC42482.1| Single-minded-like protein 1 [Crassostrea gigas]
Length = 701
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGP 43
+LPLP+AITSQLDKASIIRL SYLK+R G GD W + P
Sbjct: 26 LLPLPSAITSQLDKASIIRLCTSYLKMRTVFPDGLGD-GWGQRSP 69
>gi|308197282|gb|ADO17753.1| single-minded protein [Parhyale hawaiensis]
Length = 597
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP AIT+QLDKASIIRLT SYLK+R
Sbjct: 6 LLPLPTAITTQLDKASIIRLTTSYLKMR 33
>gi|198420580|ref|XP_002119436.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 641
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP AI++QLDKASIIRLT SYLK+R
Sbjct: 26 MLPLPLAISTQLDKASIIRLTASYLKMR 53
>gi|391325150|ref|XP_003737102.1| PREDICTED: single-minded homolog 1-like [Metaseiulus
occidentalis]
Length = 496
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP AIT+QLDKAS+IRLT SYLK+R
Sbjct: 26 LLPLPQAITTQLDKASVIRLTTSYLKMR 53
>gi|47204443|emb|CAG13520.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
MLPLP+AITSQLDKASIIRLT SYL++R
Sbjct: 26 MLPLPSAITSQLDKASIIRLTTSYLRMR 53
>gi|166343753|gb|ABY86627.1| hypoxia-inducible factor 1 alpha [Hemiscyllium ocellatum]
Length = 816
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++TS LDKASI+RLTISYL++R GD
Sbjct: 43 LPLPHSVTSHLDKASIMRLTISYLRMRKLLNAGD 76
>gi|30089690|ref|NP_835740.1| single-minded homolog 1-A [Danio rerio]
gi|82111460|sp|Q98SJ5.1|SIM1A_DANRE RecName: Full=Single-minded homolog 1-A
gi|13506717|gb|AAK27261.1| single-minded 1 [Danio rerio]
Length = 745
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQ DKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQSDKASIIRLTTSYLKMR 53
>gi|380011376|ref|XP_003689783.1| PREDICTED: single-minded homolog 1-A-like [Apis florea]
Length = 738
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LP+PAA+T Q+DKAS+IRLT SYLK+R
Sbjct: 62 LLPVPAALTGQMDKASVIRLTTSYLKMR 89
>gi|328792532|ref|XP_394146.4| PREDICTED: hypothetical protein LOC410669 [Apis mellifera]
Length = 738
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LP+PAA+T Q+DKAS+IRLT SYLK+R
Sbjct: 65 LLPVPAALTGQMDKASVIRLTTSYLKMR 92
>gi|2245352|gb|AAB62395.1| hSIM1 [Homo sapiens]
Length = 766
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPL +AITSQ+DKASIIRLT SYLK+R
Sbjct: 26 LLPLASAITSQVDKASIIRLTTSYLKMR 53
>gi|166343755|gb|ABY86628.1| hypoxia-inducible factor 1 alpha [Mustelus canis]
Length = 819
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
LPLP +ITS LDKASI+RLTISYL++R G+ D
Sbjct: 43 LPLPHSITSHLDKASIMRLTISYLRMRKLLDAGNAEIEAD 82
>gi|13242249|ref|NP_077335.1| hypoxia-inducible factor 1-alpha [Rattus norvegicus]
gi|4580533|gb|AAD24413.1|AF057308_1 hypoxia-inducible factor-1 alpha [Rattus norvegicus]
Length = 823
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R G GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLGAGD 78
>gi|83778886|gb|ABC47310.1| hypoxia-inducible factor 1 alpha [Oryzias melastigma]
Length = 748
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
+LPLP +++S LDKAS++RLTISYL++R G +P
Sbjct: 42 LLPLPHSVSSSLDKASVMRLTISYLRMRKLLGSDEP 77
>gi|47230125|emb|CAG10539.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RLTISYL++R G+P
Sbjct: 43 LPLPHSVSSSLDKASIMRLTISYLRMRILLNAGEP 77
>gi|432939126|ref|XP_004082594.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oryzias
latipes]
Length = 628
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
+LPLP ++S LDKAS++RLTISYL++R G +P +
Sbjct: 42 LLPLPHNVSSSLDKASVMRLTISYLRMRKLLGTDEPKQEEE 82
>gi|348531168|ref|XP_003453082.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 766
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LPL +++S LDKASI+RLTISYL++R +PP D
Sbjct: 43 LPLSHSVSSSLDKASIMRLTISYLRMRKLLSTDEPPTEEDA 83
>gi|58332032|ref|NP_001011165.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus (Silurana) tropicalis]
gi|54648070|gb|AAH84989.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus (Silurana) tropicalis]
Length = 328
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASIMRLTISYLRIRRLLDAGD 77
>gi|40037197|gb|AAR37393.1| hypoxia-inducible factor 1 alpha [Ovis aries]
Length = 189
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 15 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 48
>gi|40037190|gb|AAR37392.1| hypoxia-inducible factor 1 alpha [Sus scrofa]
Length = 189
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 15 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 48
>gi|410898074|ref|XP_003962523.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 755
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +I+S LDKASI+RL ISYL++R G+P
Sbjct: 43 LPLPHSISSSLDKASIMRLAISYLRMRKLLNAGEP 77
>gi|145105786|gb|ABP35607.1| hypoxia inducing factor 1 alpha [Catla catla]
Length = 103
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPP 37
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 37 LPLPHNVTSHLDKASIMRLTISYLRMRKMLSSDDEA 72
>gi|345315439|ref|XP_001510942.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ornithorhynchus
anatinus]
Length = 814
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RLTISYL++R GD
Sbjct: 56 LPLPHNVSSHLDKASIMRLTISYLRMRKLLDTGD 89
>gi|350427755|ref|XP_003494869.1| PREDICTED: single-minded homolog 2-like [Bombus impatiens]
Length = 738
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LP+PAA+T Q+DKAS+IRLT SYLK+R +G
Sbjct: 65 LLPVPAALTGQMDKASVIRLTTSYLKMRALFPNG 98
>gi|340708761|ref|XP_003392990.1| PREDICTED: single-minded homolog 1-A-like [Bombus terrestris]
Length = 738
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LP+PAA+T Q+DKAS+IRLT SYLK+R +G
Sbjct: 65 LLPVPAALTGQMDKASVIRLTTSYLKMRALFPNG 98
>gi|351713876|gb|EHB16795.1| Hypoxia-inducible factor 1 alpha [Heterocephalus glaber]
Length = 832
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 48 LPLPHNVSSHLDKASVMRLTISYLRVRKLLNTGD 81
>gi|327259020|ref|XP_003214336.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Anolis
carolinensis]
Length = 835
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RLTISYL++R GD
Sbjct: 68 LPLPHHVSSHLDKASIMRLTISYLRMRKLLDAGD 101
>gi|395745967|ref|XP_002824869.2| PREDICTED: hypoxia-inducible factor 1-alpha [Pongo abelii]
Length = 668
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|325989311|gb|ADZ48669.1| hypoxia-inducible factor 1 alpha [Paralichthys olivaceus]
Length = 278
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RLTISYL++R +P
Sbjct: 6 LPLPHSVSSSLDKASIMRLTISYLRMRKLLTSDEP 40
>gi|318997430|ref|NP_001187230.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
gi|73426661|gb|AAZ75952.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
Length = 776
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>gi|118344038|ref|NP_001071842.1| transcription factor protein [Ciona intestinalis]
gi|70571397|dbj|BAE06738.1| transcription factor protein [Ciona intestinalis]
Length = 753
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP+P+ +SQLDKASI+RLT+SYL+L+ F
Sbjct: 92 LLPVPSETSSQLDKASIVRLTMSYLQLQKF 121
>gi|166343757|gb|ABY86629.1| hypoxia-inducible factor 1 alpha [Rana temporaria]
Length = 806
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RLTISYL++R GD
Sbjct: 41 LPLPHNVSSHLDKASIMRLTISYLRIRRLLDAGD 74
>gi|407316746|gb|AFU07555.1| hypoxia-inducible factor 1 alpha subunit [Hypophthalmichthys
nobilis]
Length = 774
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 76
>gi|300087115|gb|ADJ67806.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 774
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 76
>gi|294961104|gb|ADF50043.1| hypoxia-inducible factor 1 alpha [Megalobrama amblycephala]
Length = 774
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 76
>gi|225904228|gb|ACO35259.1| hypoxia-inducible factor-1-alpha [Pseudorasbora parva]
Length = 774
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 76
>gi|403264369|ref|XP_003924458.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|403264367|ref|XP_003924457.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|355693338|gb|EHH27941.1| hypothetical protein EGK_18259, partial [Macaca mulatta]
Length = 816
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 34 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 67
>gi|332237270|ref|XP_003267828.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Nomascus
leucogenys]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|197098558|ref|NP_001126975.1| hypoxia-inducible factor 1-alpha [Pongo abelii]
gi|55733347|emb|CAH93355.1| hypothetical protein [Pongo abelii]
Length = 827
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|296215222|ref|XP_002754036.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Callithrix
jacchus]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|355778653|gb|EHH63689.1| hypothetical protein EGM_16704 [Macaca fascicularis]
Length = 827
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|332842389|ref|XP_003339308.1| PREDICTED: hypoxia-inducible factor 1-alpha [Pan troglodytes]
gi|332842391|ref|XP_001169001.2| PREDICTED: hypoxia-inducible factor 1-alpha isoform 11 [Pan
troglodytes]
Length = 850
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 68 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 101
>gi|332237268|ref|XP_003267827.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Nomascus
leucogenys]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|340545531|ref|NP_001230013.1| hypoxia-inducible factor 1-alpha isoform 3 [Homo sapiens]
gi|225354050|gb|ACN88547.1| hypoxia-inducible factor 1 alpha isoform I.3 [Homo sapiens]
Length = 850
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 68 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 101
>gi|111143456|gb|ABH06559.1| hypoxia inducible factor isoform 1b [Bos grunniens]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|440910232|gb|ELR60049.1| Hypoxia-inducible factor 1-alpha, partial [Bos grunniens mutus]
Length = 814
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 35 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 68
>gi|31077211|ref|NP_851397.1| hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]
gi|397523305|ref|XP_003831676.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Pan
paniscus]
gi|16326344|dbj|BAB70608.1| hypoxia-inducible factor 1 alpha variant [Homo sapiens]
gi|119601215|gb|EAW80809.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_c [Homo sapiens]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|397523307|ref|XP_003831677.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Pan
paniscus]
Length = 850
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 68 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 101
>gi|332237272|ref|XP_003267829.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Nomascus
leucogenys]
Length = 850
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 68 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 101
>gi|321117670|gb|ADW54530.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys nobilis]
Length = 719
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 10 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 43
>gi|45602851|gb|AAR95697.2| hypoxia-inducible factor-1alpha [Ctenopharyngodon idella]
Length = 774
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 76
>gi|345122364|gb|AEN74951.1| hypoxia inducible factor 1 alpha subunit [Capra hircus]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|109083876|ref|XP_001098939.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 5 [Macaca
mulatta]
gi|402876373|ref|XP_003901946.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Papio
anubis]
gi|383409709|gb|AFH28068.1| hypoxia-inducible factor 1-alpha isoform 2 [Macaca mulatta]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|109083868|ref|XP_001099149.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 7 [Macaca
mulatta]
gi|402876371|ref|XP_003901945.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Papio
anubis]
gi|380787331|gb|AFE65541.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|383409707|gb|AFH28067.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|384942934|gb|AFI35072.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|359320073|ref|XP_003639250.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Canis
lupus familiaris]
Length = 732
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|67970146|dbj|BAE01417.1| unnamed protein product [Macaca fascicularis]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|56785779|gb|AAW29027.1| hypoxia-inducible factor 1 alpha, partial [Epinephelus coioides]
Length = 699
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPP 37
LPLP +++S LDKASI+RLTISYL++R D P
Sbjct: 10 LPLPHSVSSGLDKASIMRLTISYLRMRKLLNAADEP 45
>gi|62632235|gb|AAX89137.1| hypoxia inducible factor-1 alpha [Pantholops hodgsonii]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|32469795|sp|Q9XTA5.1|HIF1A_BOVIN RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|5019612|dbj|BAA78675.1| hypoxia-inducible factor-1 alpha [Bos taurus]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|403264371|ref|XP_003924459.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Saimiri
boliviensis boliviensis]
Length = 850
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 68 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 101
>gi|321117666|gb|ADW54528.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 719
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +TS LDKASI+RLTISYL++R D
Sbjct: 10 LPLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 43
>gi|114653405|ref|XP_001168972.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 10 [Pan
troglodytes]
gi|410226740|gb|JAA10589.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297974|gb|JAA27587.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344149|gb|JAA40616.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|83583630|gb|ABC24677.1| hypoxia inducible factor 1 alpha [Carassius carassius]
Length = 776
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>gi|361095159|gb|AEW10558.1| HIF-1 alpha [Capra hircus]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|343055703|gb|AEL79603.1| hypoxia-inducible factor 1 alpha subunit [Pantholops hodgsonii]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|178056663|ref|NP_001116596.1| hypoxia-inducible factor 1-alpha [Sus scrofa]
gi|118136505|gb|ABK62873.1| hypoxia-inducible factor 1alpha [Sus scrofa]
Length = 824
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|117935055|ref|NP_776764.2| hypoxia-inducible factor 1-alpha [Bos taurus]
gi|47933909|gb|AAT39520.1| hypoxia inducible factor-1a [Bos grunniens]
gi|117306677|gb|AAI26623.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Bos taurus]
gi|296482937|tpg|DAA25052.1| TPA: hypoxia-inducible factor 1-alpha [Bos taurus]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|3790535|gb|AAC68568.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|63028439|gb|AAY27087.1| hypoxia-inducible factor 1 alpha [Microtus oeconomus]
Length = 828
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|354492579|ref|XP_003508425.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cricetulus
griseus]
Length = 818
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 65
>gi|298104182|gb|ADI54941.1| hypoxia inducible factor 1 alpha subunit [Microtus kikuchii]
Length = 828
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|116248098|sp|Q0PGG7.1|HIF1A_BOSMU RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|111143453|gb|ABH06558.1| hypoxia inducible factor isoform 1a [Bos grunniens]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|359320071|ref|XP_003639249.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Canis
lupus familiaris]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|4504385|ref|NP_001521.1| hypoxia-inducible factor 1-alpha isoform 1 [Homo sapiens]
gi|397523303|ref|XP_003831675.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Pan
paniscus]
gi|2498017|sp|Q16665.1|HIF1A_HUMAN RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha; AltName:
Full=ARNT-interacting protein; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP1; AltName:
Full=Class E basic helix-loop-helix protein 78;
Short=bHLHe78; AltName: Full=Member of PAS protein 1;
AltName: Full=PAS domain-containing protein 8
gi|6636317|gb|AAF20139.1|AF207601_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636319|gb|AAF20140.1|AF207602_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636338|gb|AAF20149.1|AF208487_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|881346|gb|AAC50152.1| hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|1144013|gb|AAC51210.1| MOP1 [Homo sapiens]
gi|11995455|gb|AAG43026.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
gi|15214788|gb|AAH12527.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|32879895|gb|AAP88778.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|61362865|gb|AAX42294.1| hypoxia-inducible factor 1 alpha subunit [synthetic construct]
gi|119601213|gb|EAW80807.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|119601214|gb|EAW80808.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|168278044|dbj|BAG11000.1| hypoxia-inducible factor 1 alpha [synthetic construct]
gi|264685689|dbj|BAI49183.1| hypoxia-inducible factor 1, alpha subunit, variant K12NR [Homo
sapiens]
gi|1097959|prf||2114407A hypoxia-inducible factor 1
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|344273483|ref|XP_003408551.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Loxodonta
africana]
Length = 871
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 93 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 126
>gi|189065475|dbj|BAG35314.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|125654604|gb|AAZ95453.2| hypoxia-inducible factor [Dicentrarchus labrax]
Length = 754
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RLTISYL++R +P
Sbjct: 44 LPLPHSVSSSLDKASIMRLTISYLRMRKLLNTDEP 78
>gi|119601212|gb|EAW80806.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_a [Homo sapiens]
Length = 827
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|114653413|ref|XP_001168948.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 9 [Pan
troglodytes]
gi|410226738|gb|JAA10588.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297972|gb|JAA27586.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344151|gb|JAA40617.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 735
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|48927335|emb|CAG29396.1| hypoxia inducible factor 1 alpha [Spalax judaei]
Length = 824
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|281349362|gb|EFB24946.1| hypothetical protein PANDA_000857 [Ailuropoda melanoleuca]
Length = 812
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 34 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 67
>gi|32469606|sp|O35800.1|HIF1A_RAT RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|2632131|emb|CAA70701.1| hypoxia-inducible factor 1 [Rattus norvegicus]
Length = 825
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|431904459|gb|ELK09842.1| Hypoxia-inducible factor 1 alpha, partial [Pteropus alecto]
Length = 873
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 33 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 66
>gi|417404834|gb|JAA49153.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|395843416|ref|XP_003794481.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Otolemur
garnettii]
Length = 736
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|348573541|ref|XP_003472549.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cavia porcellus]
Length = 873
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 89 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 122
>gi|344254779|gb|EGW10883.1| Hypoxia-inducible factor 1 alpha [Cricetulus griseus]
Length = 820
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 65
>gi|254973565|gb|ACT98611.1| hypoxia inducible factor 1 subunit alpha [Cloning vector
pCMV-HIF-1a-FLAG]
Length = 848
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|426377113|ref|XP_004055320.1| PREDICTED: hypoxia-inducible factor 1-alpha [Gorilla gorilla
gorilla]
Length = 604
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|395843414|ref|XP_003794480.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Otolemur
garnettii]
Length = 827
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|301754491|ref|XP_002913080.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ailuropoda
melanoleuca]
Length = 822
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|149051448|gb|EDM03621.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 521
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|149051449|gb|EDM03622.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Rattus
norvegicus]
Length = 826
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|148251122|gb|ABQ53550.1| hypoxia-inducible factor 1 alpha [Eospalax cansus]
Length = 818
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|410962416|ref|XP_003987766.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Felis
catus]
Length = 733
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|111143467|gb|ABH06560.1| hypoxia inducible factor isoform 2 [Bos grunniens]
Length = 864
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 85 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 118
>gi|118573327|sp|Q309Z6.1|HIF1A_EOSBA RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|78058356|gb|ABB17537.1| hypoxia inducible factor 1 alpha subunit [Eospalax baileyi]
Length = 819
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>gi|121484012|gb|ABM54325.1| HIF1A [Pan paniscus]
Length = 583
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 65
>gi|410962414|ref|XP_003987765.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Felis
catus]
Length = 824
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|350579150|ref|XP_003121901.3| PREDICTED: hypoxia-inducible factor 1-alpha-like [Sus scrofa]
Length = 283
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|157649153|gb|ABV59209.1| hypoxia-inducible factor 1 alpha [Cyprinus carpio]
Length = 774
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>gi|124013692|gb|ABM88117.1| HIF1A [Macaca nemestrina]
Length = 140
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 65
>gi|130486012|ref|NP_001076251.1| hypoxia-inducible factor 1-alpha [Oryctolagus cuniculus]
gi|31095610|gb|AAP43517.1| hypoxia inducible factor 1 alpha subunit [Oryctolagus cuniculus]
Length = 819
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|355694631|gb|AER99736.1| hypoxia inducible factor 1, alpha subunit [Mustela putorius furo]
Length = 823
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>gi|126697516|gb|ABO26715.1| hypoxia-inducible factor 1 alpha [Esox lucius]
Length = 763
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP +ITS LDKASI+RL ISYL++R+
Sbjct: 44 LPLPHSITSNLDKASIMRLAISYLRMRNL 72
>gi|255693991|gb|ACU30154.1| hypoxia inducible factor 1 alpha [Litopenaeus vannamei]
Length = 1050
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSK 47
LPLPA SQLDKAS++RLTI+YLK R P + G S
Sbjct: 67 LPLPAQTVSQLDKASVMRLTIAYLKTRALCQARFPKITEGGACASN 112
>gi|38374005|gb|AAR19225.1| hypoxia-inducible factor 1 alpha subunit [Canis lupus familiaris]
Length = 786
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 24 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 57
>gi|321117678|gb|ADW54534.1| hypoxia-inducible factor-1alpha [Carassius auratus]
Length = 725
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 16 LPLPHNVTSHLDKASIMRLTISYLRMR 42
>gi|321117672|gb|ADW54531.1| hypoxia-inducible factor-1alpha [Cyprinus carpio]
Length = 719
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 10 LPLPHNVTSHLDKASIMRLTISYLRMR 36
>gi|37499124|gb|AAQ91619.1| hypoxia inducible factor 1 alpha [Danio rerio]
Length = 777
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>gi|87204421|gb|ABD32158.1| hypoxia-inducible factor 1 alpha [Micropogonias undulatus]
Length = 752
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RLTISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLTISYLRMRKLLSTDEP 77
>gi|432923895|ref|XP_004080505.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Oryzias latipes]
Length = 353
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLK--------LRDFSGHGDPPWSRDGPSPSKSVKGI 52
+LPL A++ SQLDK SIIRLT+SY++ +R +G D W + G + G
Sbjct: 33 LLPLQASVQSQLDKPSIIRLTLSYIRMQTLLKENMRTSAGARDTEWVQQGLEVGEQFNG- 91
Query: 53 PHNLQEGQ 60
N++E +
Sbjct: 92 GQNVEEKE 99
>gi|393905996|gb|EJD74135.1| Sim1b long isoform [Loa loa]
Length = 374
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL AAIT QLDKASI+RLT +YL LR+
Sbjct: 21 LPLAAAITFQLDKASIVRLTSAYLALRN 48
>gi|402581177|gb|EJW75125.1| hypothetical protein WUBG_13968, partial [Wuchereria bancrofti]
Length = 100
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL AAIT QLDKASI+RLT +YL LR+
Sbjct: 21 LPLAAAITFQLDKASIVRLTSAYLALRN 48
>gi|325513897|gb|ADZ23997.1| hypoxia-inducible factor 1a [Myxocyprinus asiaticus]
Length = 780
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++S LDKASI+RLTISYL++R+
Sbjct: 43 LPLPHNVSSHLDKASIMRLTISYLRMRNL 71
>gi|197313456|dbj|BAG69568.1| hypoxia-inducible factor 1 alpha [Daphnia magna]
Length = 842
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 29/34 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LP+PA+++SQLDKASI+RLTI++LK + G+
Sbjct: 41 LLPVPASLSSQLDKASIMRLTIAFLKAQSLLGNS 74
>gi|315259619|gb|ADT92124.1| hypoxia-inducible factor 1 alpha [Capra hircus]
Length = 103
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 1 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 34
>gi|312106054|ref|XP_003150634.1| hypothetical protein LOAG_15094 [Loa loa]
Length = 101
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL AAIT QLDKASI+RLT +YL LR+
Sbjct: 21 LPLAAAITFQLDKASIVRLTSAYLALRN 48
>gi|355707717|gb|AES03041.1| neuronal PAS domain protein 1 [Mustela putorius furo]
Length = 96
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 25/26 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLK 26
+LPLP AI+SQLDKASI+RL+++YL+
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLR 96
>gi|7331119|gb|AAF60282.1| hypoxia-inducible factor 1 alpha [Ovis aries]
Length = 103
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 4 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 37
>gi|147900690|ref|NP_001086426.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
gi|116487674|gb|AAI26006.1| HIF-1a protein [Xenopus laevis]
Length = 800
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RL ISYL+LR GD
Sbjct: 44 LPLPHNVSSHLDKASIMRLAISYLRLRRLLDAGD 77
>gi|6118506|gb|AAF04124.1|AF193574_1 HIF1-alpha protein [Cavia porcellus]
Length = 108
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 15 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 48
>gi|395504059|ref|XP_003756377.1| PREDICTED: hypoxia-inducible factor 1-alpha [Sarcophilus
harrisii]
Length = 811
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRMRKLLDAGD 77
>gi|281484995|gb|ADA70345.1| hypoxia-inducible factor [Siganus rivulatus]
Length = 161
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RLTISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLTISYLRMRKLLTPNEP 77
>gi|102621855|gb|ABF71072.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 800
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RL ISYL+LR GD
Sbjct: 44 LPLPHNVSSHLDKASIMRLAISYLRLRRLLDAGD 77
>gi|449331544|gb|AGE97172.1| hypoxia inducible factor-1alpha [Haliotis diversicolor]
Length = 711
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL----RDFSGHGDPPWSRDG 42
LPLP+++++QLDKASI+RLTIS+LK+ + H D DG
Sbjct: 39 LPLPSSVSTQLDKASIMRLTISFLKICKIREEKKWHDDDEHCEDG 83
>gi|334310623|ref|XP_001377570.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Monodelphis
domestica]
Length = 1007
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 230 LPLPHNVSSHLDKASVMRLTISYLRMRKLLDAGD 263
>gi|449278511|gb|EMC86333.1| Hypoxia-inducible factor 1 alpha, partial [Columba livia]
Length = 801
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 34 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 67
>gi|338191512|gb|AEI84585.1| HIF-alpha [Cynoglossus semilaevis]
Length = 735
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 25/27 (92%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+S LDKASI+RLTISYL++R
Sbjct: 43 LPLPHSISSSLDKASIMRLTISYLRIR 69
>gi|449504557|ref|XP_002200394.2| PREDICTED: hypoxia-inducible factor 1-alpha [Taeniopygia guttata]
Length = 825
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 58 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 91
>gi|41053885|ref|NP_956527.1| hypoxia-inducible factor 1-alpha [Danio rerio]
gi|28422764|gb|AAH46875.1| Hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) b [Danio rerio]
gi|182892028|gb|AAI65712.1| Hif1ab protein [Danio rerio]
Length = 533
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>gi|427794751|gb|JAA62827.1| Putative hypoxia-inducible factor 1 alpha subunit basic
helix-loop-helix transcription factor b, partial
[Rhipicephalus pulchellus]
Length = 988
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++ QLDKAS++RL ISYL+LR+
Sbjct: 155 LPLPESVACQLDKASVMRLAISYLRLREI 183
>gi|37779200|gb|AAO72733.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
Length = 489
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RL ISYL+LR GD
Sbjct: 29 LPLPHNVSSHLDKASIMRLAISYLRLRRLLDAGD 62
>gi|407316750|gb|AFU07557.1| hypoxia-inducible factor 1 alpha subunit [Lepisosteus
platostomus]
Length = 803
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD-FSGHGD 35
LPLP ++S LDKASI+RLTISYL++R S GD
Sbjct: 43 LPLPHNVSSHLDKASIMRLTISYLRMRKLLSTAGD 77
>gi|148229705|ref|NP_001080449.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus laevis]
gi|27696866|gb|AAH43769.1| Hif1a-prov protein [Xenopus laevis]
Length = 802
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKASI+RLTISYL++R GD
Sbjct: 44 LPLPHNVSSNLDKASIMRLTISYLQIRKLLDAGD 77
>gi|126697510|gb|ABO26712.1| hypoxia-inducible factor 1 alpha [Acipenser gueldenstaedtii]
Length = 784
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSG 32
LPLP +TS LDKASI+RL +SYL++R+ G
Sbjct: 43 LPLPRNVTSHLDKASIMRLILSYLRMRNVLG 73
>gi|407316748|gb|AFU07556.1| hypoxia-inducible factor 1 alpha subunit [Acipenser sinensis]
Length = 763
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSG 32
LPLP +TS LDKASI+RL +SYL++R+ G
Sbjct: 43 LPLPHNVTSHLDKASIMRLILSYLRMRNVLG 73
>gi|390407703|ref|NP_001254578.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
gi|126697524|gb|ABO26719.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
Length = 756
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD 41
LPLP ++TS LDKASI+RL ISYL +R H D P + +
Sbjct: 43 LPLPHSVTSGLDKASIMRLIISYLCMRKLL-HNDEPVTEE 81
>gi|390358832|ref|XP_003729347.1| PREDICTED: uncharacterized protein LOC100891430
[Strongylocentrotus purpuratus]
Length = 1248
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFS 31
+LP P +T +LDK SIIRLT SYL+++ FS
Sbjct: 28 LLPYPEEVTRRLDKGSIIRLTTSYLRMKKFS 58
>gi|321117674|gb|ADW54532.1| hypoxia-inducible factor-1alpha [Pseudorasbora parva]
Length = 719
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 3 PLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
PLP +TS LDKASI+RLTISYL++R D
Sbjct: 11 PLPHNVTSHLDKASIMRLTISYLRMRKLLSSDD 43
>gi|407316744|gb|AFU07554.1| hypoxia-inducible factor 1 alpha subunit [Polypterus senegalus]
Length = 801
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRVR 69
>gi|51921791|gb|AAU14021.1| hypoxia-inducible factor 1 alpha subunit [Spermophilus
tridecemlineatus]
Length = 821
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL +R GD
Sbjct: 44 LPLPHXVSSHLDKASVMRLTISYLLVRKLLDAGD 77
>gi|223648404|gb|ACN10960.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 752
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++TS LDKASI+RL ISYL +R+
Sbjct: 44 LPLPHSVTSNLDKASIMRLAISYLHMRNL 72
>gi|185134444|ref|NP_001117760.1| hypoxia-inducible factor 1-alpha [Oncorhynchus mykiss]
gi|32469773|sp|Q98SW2.1|HIF1A_ONCMY RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|13561506|gb|AAK30364.1|AF304864_1 hypoxia-inducible factor 1 alpha [Oncorhynchus mykiss]
Length = 766
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++TS LDKASI+RL ISYL +R+
Sbjct: 44 LPLPHSVTSNLDKASIMRLAISYLHMRNL 72
>gi|393659842|dbj|BAM28632.1| hypoxia-inducible factor1alpha [Homo sapiens]
Length = 76
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++S LDKAS++RLTISYL++R
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKL 72
>gi|126697514|gb|ABO26714.1| hypoxia-inducible factor 1 alpha [Thymallus thymallus]
Length = 745
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++TS LDKASI+RL ISYL +R+
Sbjct: 44 LPLPHSVTSNLDKASIMRLAISYLHMRNL 72
>gi|407316758|gb|AFU07561.1| hypoxia-inducible factor 1 alpha subunit [Schizothorax prenanti]
Length = 770
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RL ISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLAISYLRMR 69
>gi|126697512|gb|ABO26713.1| hypoxia-inducible factor 1 alpha [Aspius aspius]
Length = 773
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RL ISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLAISYLRMR 69
>gi|189217816|ref|NP_001121349.1| aryl-hydrocarbon receptor repressor [Xenopus laevis]
gi|160878073|gb|ABX52001.1| aryl hydrocarbon receptor repressor [Xenopus laevis]
Length = 754
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGIPHNLQEGQ 60
+LP P I ++LDK SI+RL++SYLK+++F + S+ PS S + H ++E +
Sbjct: 50 LLPFPPEIIAKLDKLSILRLSVSYLKVKNFFQAIEEQHSKKQPSQS-----VGHAIKEDK 104
Query: 61 DS 62
S
Sbjct: 105 TS 106
>gi|407316752|gb|AFU07558.1| hypoxia-inducible factor 1 alpha subunit [Gymnocypris namensis]
Length = 774
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISY++ R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYMRTR 69
>gi|58272373|gb|AAW69834.1| hypoxia-inducible factor 1 alpha [Gymnocypris przewalskii]
Length = 773
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISY++ R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYMRTR 69
>gi|326921175|ref|XP_003206838.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Meleagris
gallopavo]
Length = 837
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 70 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 103
>gi|321473894|gb|EFX84860.1| putative hypoxia inducible factor-1 alpha [Daphnia pulex]
Length = 846
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 29/33 (87%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGH 33
+LP+P++++SQLDKASI+RLTI++LK + G+
Sbjct: 41 LLPVPSSLSSQLDKASIMRLTIAFLKAQSLLGN 73
>gi|169591451|gb|ACA58053.1| hypoxia-inducible factor-1 alpha, partial [Thunnus orientalis]
Length = 226
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 22 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTDEP 56
>gi|26329679|dbj|BAC28578.1| unnamed protein product [Mus musculus]
Length = 837
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKAS++RLTISYL++R
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVR 71
>gi|20070686|gb|AAH26139.1| Hypoxia inducible factor 1, alpha subunit [Mus musculus]
Length = 836
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|74219449|dbj|BAE29500.1| unnamed protein product [Mus musculus]
Length = 836
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|226061948|ref|NP_034561.2| hypoxia-inducible factor 1-alpha [Mus musculus]
gi|32470615|sp|Q61221.3|HIF1A_MOUSE RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha; AltName:
Full=ARNT-interacting protein
gi|148704553|gb|EDL36500.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Mus
musculus]
Length = 836
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|2197095|gb|AAC53455.1| hypoxia-inducible factor 1 alpha [Mus musculus]
gi|2289249|gb|AAC53461.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 836
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|288887162|gb|ADC55889.1| hypoxia inducible factor-1alpha [Gobionotothen gibberifrons]
Length = 519
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 12 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTEEP 46
>gi|2113881|emb|CAA70305.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 64
>gi|4379202|emb|CAA64833.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 32 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 64
>gi|148704554|gb|EDL36501.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Mus
musculus]
Length = 904
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 112 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 144
>gi|2821940|emb|CAA70306.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 822
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|74223866|dbj|BAE23829.1| unnamed protein product [Mus musculus]
Length = 441
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKAS++RLTISYL++R
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVR 71
>gi|1389891|gb|AAC52730.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 822
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP ++S LDKAS++RLTISYL++R G
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAG 76
>gi|1160481|emb|CAA64458.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 64
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKAS++RLTISYL++R
Sbjct: 23 LPLPHNVSSHLDKASVMRLTISYLRVR 49
>gi|71911731|gb|AAZ52828.1| hypoxia inducible factor 1 alpha [Pachycara brachycephalum]
Length = 747
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTDEP 77
>gi|12857320|dbj|BAB30975.1| unnamed protein product [Mus musculus]
Length = 258
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKAS++RLTISYL++R
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVR 70
>gi|326673039|ref|XP_001337610.2| PREDICTED: hypoxia-inducible factor 1-alpha [Danio rerio]
Length = 730
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++TS LDKAS++RL +SYL+LR
Sbjct: 123 LPLPHSVTSNLDKASVMRLALSYLRLR 149
>gi|170575332|ref|XP_001893196.1| PAS domain containing protein [Brugia malayi]
gi|158600927|gb|EDP37971.1| PAS domain containing protein [Brugia malayi]
Length = 373
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL AAIT QLDKASI+RLT +YL L++
Sbjct: 21 LPLAAAITFQLDKASIVRLTSAYLALQN 48
>gi|126697522|gb|ABO26718.1| hypoxia-inducible factor 1 alpha [Sander lucioperca]
Length = 749
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTTEP 77
>gi|45383550|ref|NP_989628.1| hypoxia-inducible factor 1-alpha [Gallus gallus]
gi|32469796|sp|Q9YIB9.2|HIF1A_CHICK RecName: Full=Hypoxia-inducible factor 1-alpha;
Short=HIF-1-alpha; Short=HIF1-alpha
gi|7594825|dbj|BAA34234.2| hypoxia-inducible factor-1 alpha [Gallus gallus]
Length = 811
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 44 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 77
>gi|71911739|gb|AAZ52832.1| hypoxia inducible factor 1 alpha [Zoarces viviparus]
Length = 747
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTDEP 77
>gi|288887164|gb|ADC55890.1| hypoxia inducible factor-1alpha [Pseudochaenichthys georgianus]
Length = 686
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTEEP 77
>gi|288887156|gb|ADC55886.1| hypoxia inducible factor-1alpha [Champsocephalus gunnari]
Length = 666
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 42 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTEEP 76
>gi|288887158|gb|ADC55887.1| hypoxia inducible factor-1alpha [Notothenia coriiceps]
Length = 658
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R +P
Sbjct: 42 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTEEP 76
>gi|223648522|gb|ACN11019.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 802
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++TS LDKASI+RL ISYL +R D
Sbjct: 91 LPLPHSVTSNLDKASIMRLAISYLHMRKLLSTDD 124
>gi|407316754|gb|AFU07559.1| hypoxia-inducible factor 1 alpha subunit [Protopterus annectens]
Length = 813
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP I+S LDKASI+RL ISYL++R
Sbjct: 42 LPLPHNISSHLDKASIMRLVISYLRMR 68
>gi|126697520|gb|ABO26717.1| hypoxia-inducible factor 1 alpha [Perca fluviatilis]
Length = 749
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+RL ISYL++R P
Sbjct: 43 LPLPHSVSSSLDKASIMRLIISYLRMRKLLSTAKP 77
>gi|190337520|gb|AAI63440.1| Epas1 protein [Danio rerio]
Length = 834
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG 42
LPLP +I+S LDKASI+RL IS+L+ R SG+ P D
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLVNSGYNTPTEMTDA 83
>gi|89886285|ref|NP_001034895.1| endothelial PAS domain-containing protein 1 [Danio rerio]
gi|87242613|gb|ABD33838.1| hypoxia inducible factor 2 alpha [Danio rerio]
Length = 832
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG 42
LPLP +I+S LDKASI+RL IS+L+ R SG+ P D
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLVNSGYNTPTEMTDA 83
>gi|195451485|ref|XP_002072943.1| GK13872 [Drosophila willistoni]
gi|194169028|gb|EDW83929.1| GK13872 [Drosophila willistoni]
Length = 1563
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL SQLDKAS++R+TI+YLK+RD
Sbjct: 89 VLPLKTDDVSQLDKASVMRITIAYLKIRDM 118
>gi|296240119|gb|ADH01741.1| hypoxia-inducible factor 1 alpha [Callionymus valenciennei]
Length = 703
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSG 32
LPLP +S LDKASI+RLTISYL++R G
Sbjct: 43 LPLPPGSSSSLDKASIMRLTISYLRMRKLLG 73
>gi|407316784|gb|AFU07574.1| hypoxia-inducible factor 3 alpha subunit [Polyodon spathula]
Length = 532
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKA+IIRLT+SYL+++
Sbjct: 41 LPLPRTVTSHLDKAAIIRLTLSYLRVQ 67
>gi|407316780|gb|AFU07572.1| hypoxia-inducible factor 3 alpha subunit [Acipenser sinensis]
Length = 530
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKA+IIRLT+SYL+++
Sbjct: 41 LPLPRTVTSHLDKAAIIRLTLSYLRVQ 67
>gi|326672423|ref|XP_695262.5| PREDICTED: endothelial PAS domain-containing protein 1 [Danio
rerio]
Length = 810
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF--SGH 33
LPLP +I+S LDKASI+RL IS+L+ R SGH
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLFSSGH 74
>gi|126723509|ref|NP_001075674.1| aryl hydrocarbon receptor [Oryctolagus cuniculus]
gi|25089567|sp|O02747.1|AHR_RABIT RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR
gi|2094756|dbj|BAA19930.1| Ah receptor [Oryctolagus cuniculus]
Length = 847
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD---GPSPSKSVKGIPHNLQ 57
+LP P + ++LDK S++RL++SYL+ + F S D G P ++ G NLQ
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSSADRNGGQDPCRAKFGEGLNLQ 112
Query: 58 EGQ 60
EG+
Sbjct: 113 EGE 115
>gi|407316774|gb|AFU07569.1| hypoxia-inducible factor 2 alpha subunit [Schizothorax prenanti]
Length = 833
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+S LDKASI+RL ISYL+ R
Sbjct: 41 LPLPHSISSHLDKASIMRLAISYLRTR 67
>gi|190338432|gb|AAI63508.1| Aryl hydrocarbon receptor 1b [Danio rerio]
Length = 940
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +TS LDK SI+RL++SYL+ ++F
Sbjct: 45 LLPFPEEVTSSLDKLSILRLSVSYLRAKNF 74
>gi|67459929|ref|NP_001019987.1| aryl hydrocarbon receptor [Danio rerio]
gi|66132539|gb|AAY42958.1| aryl hydrocarbon receptor 1B [Danio rerio]
Length = 940
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +TS LDK SI+RL++SYL+ ++F
Sbjct: 45 LLPFPEEVTSSLDKLSILRLSVSYLRAKNF 74
>gi|185133424|ref|NP_001117158.1| aryl hydrocarbon receptor 1 alpha [Salmo salar]
gi|41350637|gb|AAS00539.1| aryl hydrocarbon receptor 1 alpha [Salmo salar]
Length = 1029
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +TS LDK SI+RL++SYL+ ++F
Sbjct: 53 LLPFPEEVTSSLDKLSILRLSVSYLRTKNF 82
>gi|126697518|gb|ABO26716.1| hypoxia-inducible factor 1 alpha [Gymnocephalus cernuus]
Length = 748
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP I+S LDKASI+RL ISYL++R
Sbjct: 43 LPLPHGISSSLDKASIMRLIISYLRMR 69
>gi|41350639|gb|AAS00540.1| aryl hydrocarbon receptor 1 beta, partial [Salmo salar]
Length = 947
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +TS LDK SI+RL++SYL+ ++F
Sbjct: 11 LLPFPEEVTSSLDKLSILRLSVSYLRTKNF 40
>gi|383856713|ref|XP_003703852.1| PREDICTED: uncharacterized protein LOC100878780 [Megachile
rotundata]
Length = 749
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 6 AAITSQLDKASIIRLTISYLKLRDFSGHG 34
A+T+QLDKAS+IR+T SYLK+R HG
Sbjct: 93 TALTAQLDKASVIRVTTSYLKMRALFPHG 121
>gi|395830854|ref|XP_003788529.1| PREDICTED: aryl hydrocarbon receptor [Otolemur garnettii]
Length = 850
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPHNLQE 58
+LP P I ++LDK S++RL++SYL+ + F P R+G +++ NLQE
Sbjct: 53 LLPFPQDIINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGGQDNRTNFREDLNLQE 112
Query: 59 GQ 60
G+
Sbjct: 113 GE 114
>gi|407316790|gb|AFU07577.1| hypoxia-inducible factor 2 alpha subunit, partial [Protopterus
annectens]
Length = 727
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I++ LDKASI+RLTIS+L+ R
Sbjct: 41 LPLPHSISTHLDKASIMRLTISFLRTR 67
>gi|262189351|gb|ACY30370.1| aryl hydrocarbon receptor 1 beta-like protein [Salmo salar]
Length = 1166
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ ++F
Sbjct: 49 LLPFPEEVTTSLDKLSILRLSVSYLRAKNF 78
>gi|358337662|dbj|GAA56007.1| hypoxia-inducible factor 1 alpha [Clonorchis sinensis]
Length = 250
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL I +QLDKASI+RL +SY+KL+ F
Sbjct: 63 LLPLHPEIAAQLDKASIVRLVVSYVKLQTF 92
>gi|407316760|gb|AFU07562.1| hypoxia-inducible factor 2 alpha subunit [Polypterus senegalus]
Length = 848
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+S +DKASI+RLTIS+L+ R
Sbjct: 41 LPLPHSISSHIDKASIMRLTISFLRTR 67
>gi|431900739|gb|ELK08183.1| Aryl hydrocarbon receptor repressor [Pteropus alecto]
Length = 582
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP PA + S+LDK S++RL++SYL+++ F
Sbjct: 43 LLPFPADVVSKLDKLSVLRLSVSYLRVKSF 72
>gi|395529671|ref|XP_003766932.1| PREDICTED: hypoxia-inducible factor 3-alpha [Sarcophilus harrisii]
Length = 1015
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS 39
LP +++ LDKASI+RLTISYL++ GD WS
Sbjct: 362 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGD--WS 397
>gi|395751416|ref|XP_002829487.2| PREDICTED: hypoxia-inducible factor 3-alpha-like, partial [Pongo
abelii]
Length = 256
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
LP +++ LDKASI+RLTISYL++ G+ R G P
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGEWNQVRAGGEP 84
>gi|4558636|gb|AAD22667.1|AC007193_1 hypoxia-inducible factor 3 alpha subunit, partial [Homo sapiens]
Length = 112
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGP 43
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 32 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVGA 71
>gi|4092037|gb|AAC99397.1| hypoxia-inducible factor 3 alpha subunit [Homo sapiens]
Length = 115
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGP 43
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 35 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVGA 74
>gi|47221953|emb|CAG08208.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR 40
+LP P +T+ LDK SI+RL++SYL+ ++F D + R
Sbjct: 46 LLPFPEEVTATLDKLSILRLSVSYLRAKNFFSGKDDLFRR 85
>gi|328718768|ref|XP_001951675.2| PREDICTED: hypothetical protein LOC100167974 [Acyrthosiphon
pisum]
Length = 928
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPLPA++ SQLDKA+++RLTI+ K+ D
Sbjct: 42 LPLPASVISQLDKATVMRLTIASFKIMD 69
>gi|407316776|gb|AFU07570.1| hypoxia-inducible factor 3 alpha subunit [Polypterus senegalus]
Length = 627
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKA+I+RLT+S+L+++
Sbjct: 33 LPLPRGVTSHLDKAAIMRLTLSFLRMK 59
>gi|189054460|dbj|BAG37233.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LPL +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPLARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|54020803|ref|NP_001005647.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
gi|49250453|gb|AAH74648.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 862
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +I+S LDKASI+RLTIS+L+
Sbjct: 41 LPLPQSISSHLDKASIMRLTISFLR 65
>gi|431908968|gb|ELK12559.1| Aryl hydrocarbon receptor [Pteropus alecto]
Length = 806
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVK-GIPHNLQ 57
+LP P I ++LDK S++RL++SYL+ + F P R+G + K G N Q
Sbjct: 53 LLPFPQDIINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFGESLNFQ 112
Query: 58 EGQ 60
EG+
Sbjct: 113 EGE 115
>gi|410949877|ref|XP_003981643.1| PREDICTED: aryl hydrocarbon receptor repressor [Felis catus]
Length = 721
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPLPPDIVSKLDKLSVLRLSVSYLRVKSF 79
>gi|431909193|gb|ELK12783.1| Hypoxia-inducible factor 3 alpha [Pteropus alecto]
Length = 678
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ WS+ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCSAGE--WSQVG 79
>gi|313229375|emb|CBY23962.1| unnamed protein product [Oikopleura dioica]
Length = 778
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS 39
+LP+ + LDKAS IR+TI++L+L F+G+G W+
Sbjct: 61 LLPIDEVAANNLDKASSIRITIAFLRLCKFAGNGITDWN 99
>gi|296240117|gb|ADH01740.1| hypoxia-inducible factor 1 alpha [Oratosquilla oratoria]
Length = 1050
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP +QLDKAS++RLTI++LK R G
Sbjct: 54 LPLPQKTIAQLDKASVMRLTIAFLKTRALCEKG 86
>gi|83817015|ref|NP_001033051.1| aryl hydrocarbon receptor 1A [Takifugu rubripes]
gi|68349471|gb|AAY96629.1| aryl hydrocarbon receptor 1A [Takifugu rubripes]
Length = 973
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ ++F
Sbjct: 45 LLPFPEEVTATLDKLSILRLSVSYLRAKNF 74
>gi|407316766|gb|AFU07565.1| hypoxia-inducible factor 2 alpha subunit [Lepisosteus
platostomus]
Length = 851
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKASI+RLTIS+L+ R
Sbjct: 40 LPLPHNVSSHLDKASIMRLTISFLRTR 66
>gi|407316756|gb|AFU07560.1| hypoxia-inducible factor 1 alpha subunit [Polyodon spathula]
Length = 784
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPLP +TS LDKASI+RL +SYL++R+
Sbjct: 43 LPLPHNVTSHLDKASIMRLILSYLRMRN 70
>gi|301782547|ref|XP_002926684.1| PREDICTED: aryl hydrocarbon receptor repressor-like [Ailuropoda
melanoleuca]
Length = 729
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPLPPDIVSKLDKLSVLRLSVSYLRVKSF 79
>gi|281340616|gb|EFB16200.1| hypothetical protein PANDA_016379 [Ailuropoda melanoleuca]
Length = 707
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 33 LLPLPPDIVSKLDKLSVLRLSVSYLRVKSF 62
>gi|407316762|gb|AFU07563.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
nobilis]
Length = 832
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP +I+S LDKASI+RL IS+L+ R G
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLLTSG 73
>gi|407316772|gb|AFU07568.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
molitrix]
Length = 832
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LPLP +I+S LDKASI+RL IS+L+ R G
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLLTSG 73
>gi|294961106|gb|ADF50044.1| hypoxia-inducible factor 2 alpha [Megalobrama amblycephala]
Length = 835
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+S LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTR 67
>gi|242022671|ref|XP_002431762.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
gi|212517087|gb|EEB19024.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
Length = 368
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL ++ +QLDKAS++RL ISYLK+++
Sbjct: 63 LPLKQSVIAQLDKASVMRLVISYLKIQNL 91
>gi|301611310|ref|XP_002935182.1| PREDICTED: aryl hydrocarbon receptor repressor-like, partial
[Xenopus (Silurana) tropicalis]
Length = 732
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPS 44
+LP P I ++LDK SI+RL++SYL+++ F + S+ PS
Sbjct: 29 LLPFPPEIIAKLDKLSILRLSVSYLRVKSFFQAIEEQHSKKQPS 72
>gi|294961108|gb|ADF50045.1| hypoxia-inducible factor 3 alpha [Megalobrama amblycephala]
Length = 643
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP ITS LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRITSHLDKAAIMRVTLSYLRM 65
>gi|407316778|gb|AFU07571.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
nobilis]
Length = 646
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP ITS LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRITSHLDKAAIMRVTLSYLRM 65
>gi|432936020|ref|XP_004082081.1| PREDICTED: aryl hydrocarbon receptor-like [Oryzias latipes]
Length = 764
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ ++F
Sbjct: 45 LLPFPEDVTASLDKLSILRLSVSYLRAKNF 74
>gi|50261639|gb|AAT72404.1| hypoxia-inducible factor 1 alpha [Palaemonetes pugio]
Length = 1057
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLPA S LDKAS++RLTI++LK R
Sbjct: 52 LPLPARTISMLDKASVMRLTIAFLKTR 78
>gi|407316786|gb|AFU07575.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
molitrix]
Length = 633
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP ITS LDKA+I+R+T+SYL++
Sbjct: 33 LPLPRRITSHLDKAAIMRVTLSYLRM 58
>gi|345785608|ref|XP_533636.3| PREDICTED: hypoxia-inducible factor 3-alpha [Canis lupus
familiaris]
Length = 639
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|344269355|ref|XP_003406518.1| PREDICTED: hypoxia-inducible factor 3-alpha [Loxodonta africana]
Length = 670
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 91 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 129
>gi|301558001|gb|ADK78995.1| aryl hydrocarbon receptor repressor [Canis lupus familiaris]
Length = 186
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 47 LLPLPPDIVSKLDKLSVLRLSVSYLRVKSF 76
>gi|118419961|gb|ABK88250.1| aryl hydrocarbon receptor [Megaptera novaeangliae]
Length = 851
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALQSTPADRNGVQDNCRTKCREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|432904408|ref|XP_004077316.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1-like [Oryzias latipes]
Length = 862
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +++S LDKASI+RL IS+L+ R
Sbjct: 46 LPLPHSVSSHLDKASIMRLAISFLRTR 72
>gi|296234167|ref|XP_002762300.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Callithrix
jacchus]
Length = 670
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCASGE--WNQVG 79
>gi|62148944|dbj|BAD93355.1| hypoxia-inducible factor-3 alpha 4 [Homo sapiens]
gi|119577818|gb|EAW57414.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_g [Homo
sapiens]
Length = 363
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|440906939|gb|ELR57150.1| Aryl hydrocarbon receptor repressor, partial [Bos grunniens
mutus]
Length = 721
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 59 LLPLPPDIISKLDKLSVLRLSVSYLRVKSF 88
>gi|87204423|gb|ABD32159.1| hypoxia-inducible factor 2 alpha [Micropogonias undulatus]
Length = 847
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +++S LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLRTR 67
>gi|20072846|gb|AAH26308.1| HIF3A protein [Homo sapiens]
Length = 363
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|350585329|ref|XP_003127298.3| PREDICTED: LOW QUALITY PROTEIN: hypoxia-inducible factor
3-alpha-like [Sus scrofa]
Length = 776
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 146 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 184
>gi|321453024|gb|EFX64305.1| hypothetical protein DAPPUDRAFT_13455 [Daphnia pulex]
Length = 323
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP+ +++ SQLDKASI+RLTI++LK++
Sbjct: 29 LLPVSSSLISQLDKASIMRLTIAFLKVQSL 58
>gi|149056848|gb|EDM08279.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 627
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|296234169|ref|XP_002762301.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Callithrix
jacchus]
Length = 668
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCASGE--WNQVG 77
>gi|194905710|ref|XP_001981242.1| GG11733 [Drosophila erecta]
gi|190655880|gb|EDV53112.1| GG11733 [Drosophila erecta]
Length = 1493
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL SQLDKAS++R+TI++LK+RD
Sbjct: 94 LPLKTDDVSQLDKASVMRITIAFLKIRDM 122
>gi|119577815|gb|EAW57411.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_d [Homo
sapiens]
Length = 614
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|402906004|ref|XP_003915797.1| PREDICTED: hypoxia-inducible factor 3-alpha [Papio anubis]
Length = 632
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|348539804|ref|XP_003457379.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 925
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTASLDKLSILRLSVSYLRAKSF 74
>gi|38385608|gb|AAR19369.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTASLDKLSILRLSVSYLRAKHF 74
>gi|332257097|ref|XP_003277652.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Nomascus
leucogenys]
Length = 669
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|126697526|gb|ABO26720.1| hypoxia-inducible factor 1 alpha [Platichthys flesus]
Length = 778
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP +++S LDKASI+ LT+SYL++R +P
Sbjct: 43 LPLPHSVSSSLDKASIMGLTMSYLRIRKLLTSDEP 77
>gi|426246869|ref|XP_004017210.1| PREDICTED: aryl hydrocarbon receptor repressor [Ovis aries]
Length = 508
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 52 LLPLPPDIISKLDKLSVLRLSVSYLRVKSF 81
>gi|9188539|dbj|BAA99559.1| arylhydrocarbon receptor [Mesocricetus auratus]
Length = 920
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPHNLQE 58
+LP P + ++LDK S++RL++SYL+ + F P R+G P +LQE
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGGQEQCRAFRDPLDLQE 111
Query: 59 GQ 60
G+
Sbjct: 112 GE 113
>gi|90421311|ref|NP_690008.2| hypoxia-inducible factor 3-alpha isoform c [Homo sapiens]
gi|145558932|sp|Q9Y2N7.2|HIF3A_HUMAN RecName: Full=Hypoxia-inducible factor 3-alpha;
Short=HIF-3-alpha; Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=Class E basic helix-loop-helix protein 17;
Short=bHLHe17; AltName: Full=HIF3-alpha-1; AltName:
Full=Inhibitory PAS domain protein; Short=IPAS;
AltName: Full=Member of PAS protein 7; AltName:
Full=PAS domain-containing protein 7
gi|261858714|dbj|BAI45879.1| hypoxia inducible factor 3, alpha subunit [synthetic construct]
Length = 669
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|426389302|ref|XP_004061062.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Gorilla
gorilla gorilla]
Length = 669
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|18448895|gb|AAL69947.1|AF463492_1 inhibitory PAS domain protein [Homo sapiens]
gi|119577814|gb|EAW57410.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_c [Homo
sapiens]
gi|167735809|dbj|BAG07185.1| hypoxia-inducible factor-3alpha2 [Homo sapiens]
Length = 632
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|38385561|gb|AAR19366.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTASLDKLSILRLSVSYLRAKHF 74
>gi|38385548|gb|AAR19365.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTASLDKLSILRLSVSYLRAKHF 74
>gi|14042618|dbj|BAB55324.1| unnamed protein product [Homo sapiens]
Length = 632
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|397493289|ref|XP_003817541.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Pan
paniscus]
Length = 669
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|332257099|ref|XP_003277653.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Nomascus
leucogenys]
Length = 667
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|51874048|gb|AAH80551.1| Hypoxia inducible factor 3, alpha subunit [Homo sapiens]
Length = 669
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|17232942|gb|AAC60334.3| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
gi|38385532|gb|AAR19364.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T+ LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTASLDKLSILRLSVSYLRAKHF 74
>gi|403299069|ref|XP_003940314.1| PREDICTED: hypoxia-inducible factor 3-alpha [Saimiri boliviensis
boliviensis]
Length = 633
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 79
>gi|351697932|gb|EHB00851.1| Hypoxia-inducible factor 3 alpha, partial [Heterocephalus glaber]
Length = 658
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 33 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 71
>gi|410039051|ref|XP_003310660.2| PREDICTED: aryl hydrocarbon receptor repressor [Pan troglodytes]
Length = 1131
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 366 LLPFPPEIISKLDKLSVLRLSVSYLRVKSF 395
>gi|147904360|ref|NP_001085564.1| MGC80468 protein [Xenopus laevis]
gi|49115150|gb|AAH72936.1| MGC80468 protein [Xenopus laevis]
Length = 859
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 23/25 (92%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +I++ LDKASI+RLTIS+L+
Sbjct: 41 LPLPQSISAHLDKASIMRLTISFLR 65
>gi|426389304|ref|XP_004061063.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Gorilla
gorilla gorilla]
Length = 667
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|23065535|ref|NP_690007.1| hypoxia-inducible factor 3-alpha isoform a [Homo sapiens]
gi|4558637|gb|AAD22668.1|AC007193_2 Putative homolog of hypoxia inducible factor three alpha [Homo
sapiens]
gi|16040975|dbj|BAB69689.1| hypoxia-inducible factor-3 alpha [Homo sapiens]
gi|119577816|gb|EAW57412.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_e [Homo
sapiens]
Length = 667
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|397493291|ref|XP_003817542.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Pan
paniscus]
Length = 667
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|114677981|ref|XP_001167523.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Pan
troglodytes]
Length = 667
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE--WNQVG 77
>gi|296475644|tpg|DAA17759.1| TPA: arylhydrocarbon receptor repressor [Bos taurus]
Length = 164
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPLPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|118151056|ref|NP_001071450.1| aryl hydrocarbon receptor repressor [Bos taurus]
gi|113911890|gb|AAI22741.1| Aryl-hydrocarbon receptor repressor [Bos taurus]
Length = 164
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPLP I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPLPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|426227437|ref|XP_004007824.1| PREDICTED: aryl hydrocarbon receptor [Ovis aries]
Length = 842
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G SK +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRSKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|241832194|ref|XP_002414889.1| hypoxia-inducible factor 1 alpha, putative [Ixodes scapularis]
gi|215509101|gb|EEC18554.1| hypoxia-inducible factor 1 alpha, putative [Ixodes scapularis]
Length = 324
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL +TSQLDKAS++RL ISYL++ +
Sbjct: 40 LPLAEGVTSQLDKASVMRLAISYLRMHE 67
>gi|75048691|sp|Q95LD9.1|AHR_DELLE RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|15625347|gb|AAL04031.1|AF332999_1 aryl hydrocarbon receptor [Delphinapterus leucas]
Length = 845
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVVNKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|410221720|gb|JAA08079.1| aryl-hydrocarbon receptor repressor [Pan troglodytes]
Length = 701
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 54 LLPFPPEIISKLDKLSVLRLSVSYLRVKSF 83
>gi|156397887|ref|XP_001637921.1| predicted protein [Nematostella vectensis]
gi|156225037|gb|EDO45858.1| predicted protein [Nematostella vectensis]
Length = 340
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+SQLD+ I+RLT SY+K++
Sbjct: 40 LPLPKSISSQLDRLCIMRLTNSYIKIK 66
>gi|56406590|gb|AAV87644.1| Aryl hydrocarbon receptor repressor, partial [Microgadus tomcod]
Length = 622
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD-FSGHGDPPWSRDGPSPSKSV 49
+LP P + ++LDK S++RL +SYL+++ F + + P ++ SP+ SV
Sbjct: 50 LLPFPPDVITKLDKLSVLRLAVSYLRVKSFFQANPEKPTRKNSISPAASV 99
>gi|50403829|gb|AAT76668.1| hypoxia-inducible factor 2 alpha [Ctenopharyngodon idella]
Length = 835
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LP+P +I+S LDKASI+RL IS+L+ R G
Sbjct: 41 LPIPHSISSHLDKASIMRLAISFLRTRKLLTSG 73
>gi|350421186|ref|XP_003492763.1| PREDICTED: hypothetical protein LOC100746032 [Bombus impatiens]
Length = 1132
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP+ S LDKAS++RL I+YLK+R
Sbjct: 46 LPLPSEQASHLDKASVMRLAIAYLKVR 72
>gi|325513893|gb|ADZ23995.1| hypoxia-inducible factor 2a [Myxocyprinus asiaticus]
Length = 782
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+S LDKASI+RL IS+L R
Sbjct: 41 LPLPQSISSHLDKASIMRLAISFLHTR 67
>gi|344308321|ref|XP_003422826.1| PREDICTED: aryl hydrocarbon receptor repressor-like [Loxodonta
africana]
Length = 729
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 125 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 154
>gi|260837027|ref|XP_002613507.1| hypothetical protein BRAFLDRAFT_208408 [Branchiostoma floridae]
gi|229298892|gb|EEN69516.1| hypothetical protein BRAFLDRAFT_208408 [Branchiostoma floridae]
Length = 336
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPL + ++QLDKASI+RL ISYLK R
Sbjct: 45 LPLAHSKSAQLDKASIMRLAISYLKTR 71
>gi|355560780|gb|EHH17466.1| Aryl hydrocarbon receptor [Macaca mulatta]
Length = 809
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPAERNGGQENCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|395854188|ref|XP_003799580.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Otolemur
garnettii]
Length = 666
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 79
>gi|402864032|ref|XP_003896289.1| PREDICTED: aryl hydrocarbon receptor [Papio anubis]
Length = 850
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPAERNGGQENCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|345315165|ref|XP_001513826.2| PREDICTED: hypothetical protein LOC100083243 [Ornithorhynchus
anatinus]
Length = 1147
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF----SGHGDPPWSRDGPS 44
+LP P + ++LDK SI+RL + YLK++ + + +P W+ D P+
Sbjct: 51 LLPFPEDVRARLDKLSILRLIVGYLKVKGYFTAAVKNKNPDWTTDQPA 98
>gi|440907533|gb|ELR57674.1| Hypoxia-inducible factor 3-alpha, partial [Bos grunniens mutus]
Length = 660
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 33 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 71
>gi|38385576|gb|AAR19367.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTGSLDKLSILRLSVSYLRAKHF 74
>gi|38385589|gb|AAR19368.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P +T LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEEVTGSLDKLSILRLSVSYLRAKHF 74
>gi|350588838|ref|XP_003482727.1| PREDICTED: aryl hydrocarbon receptor-like [Sus scrofa]
Length = 385
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVSLKSSPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|157502175|ref|NP_001098812.1| hypoxia-inducible factor 3-alpha [Bos taurus]
gi|157279353|gb|AAI53227.1| HIF3A protein [Bos taurus]
gi|296477442|tpg|DAA19557.1| TPA: hypoxia inducible factor 3, alpha subunit [Bos taurus]
Length = 669
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 79
>gi|348557855|ref|XP_003464734.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Cavia
porcellus]
Length = 667
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQMG 79
>gi|297277407|ref|XP_001108464.2| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 1
[Macaca mulatta]
Length = 669
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 79
>gi|118419959|gb|ABK88249.1| aryl hydrocarbon receptor [Eubalaena glacialis]
Length = 850
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALQSTPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|62203558|gb|AAH93209.1| Hif1al2 protein [Danio rerio]
Length = 660
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVK 50
+LPL ++ Q DKAS+IRLTI+YL LR D R PSP S K
Sbjct: 58 LLPLDLSMDGQRDKASVIRLTIAYLHLRGLLDTSDSLMKR--PSPGVSDK 105
>gi|6753016|ref|NP_033774.1| aryl hydrocarbon receptor repressor [Mus musculus]
gi|4164151|dbj|BAA37132.1| AhR repressor [Mus musculus]
gi|74152259|dbj|BAE32410.1| unnamed protein product [Mus musculus]
gi|148705141|gb|EDL37088.1| aryl-hydrocarbon receptor repressor [Mus musculus]
Length = 701
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSK-SVKGIPHNLQ 57
+LP I S+LDK S++RL++SYL+++ F + WS SP + S +G P +Q
Sbjct: 51 LLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFP--VQ 108
Query: 58 EGQ 60
EG+
Sbjct: 109 EGR 111
>gi|355703683|gb|EHH30174.1| hypothetical protein EGK_10787 [Macaca mulatta]
Length = 669
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 79
>gi|334325397|ref|XP_001368705.2| PREDICTED: aryl hydrocarbon receptor repressor [Monodelphis
domestica]
Length = 718
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 33 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 62
>gi|74185895|dbj|BAE32810.1| unnamed protein product [Mus musculus]
Length = 701
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSK-SVKGIPHNLQ 57
+LP I S+LDK S++RL++SYL+++ F + WS SP + S +G P +Q
Sbjct: 51 LLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFP--VQ 108
Query: 58 EGQ 60
EG+
Sbjct: 109 EGR 111
>gi|297277409|ref|XP_002801349.1| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 2
[Macaca mulatta]
Length = 667
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL++ G+ W++ G
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCTAGE--WNQVG 77
>gi|185133503|ref|NP_001117028.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
gi|37788922|gb|AAP46169.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
gi|38520881|emb|CAE75591.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
Length = 1058
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++ YLK++ F
Sbjct: 51 LLPFPEDVCSRLDKLSVLRLSVGYLKVKSF 80
>gi|194224067|ref|XP_001490968.2| PREDICTED: aryl hydrocarbon receptor repressor-like [Equus
caballus]
Length = 783
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 117 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 146
>gi|185133306|ref|NP_001117724.1| aryl hydrocarbon receptor beta [Oncorhynchus mykiss]
gi|31982972|gb|AAC95336.4| aryl hydrocarbon receptor beta [Oncorhynchus mykiss]
Length = 1059
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++ YLK++ F
Sbjct: 52 LLPFPEDVCSRLDKLSVLRLSVGYLKVKSF 81
>gi|432104619|gb|ELK31231.1| Aryl hydrocarbon receptor repressor [Myotis davidii]
Length = 824
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+++ F
Sbjct: 40 LLPFPPDVVSKLDKLSVLRLSVSYLRVKSF 69
>gi|319402133|ref|NP_001188316.1| aryl hydrocarbon receptor repressor [Gallus gallus]
gi|312165964|gb|ADQ38959.1| aryl hydrocarbon receptor repressor [Gallus gallus]
Length = 756
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|407316764|gb|AFU07564.1| hypoxia-inducible factor 2 alpha subunit [Acipenser sinensis]
Length = 852
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHNVSSHLDKASIMRLAISFLRTR 67
>gi|123790782|sp|Q3U1U7.1|AHRR_MOUSE RecName: Full=Aryl hydrocarbon receptor repressor; Short=AhR
repressor; Short=AhRR
gi|74212896|dbj|BAE33396.1| unnamed protein product [Mus musculus]
Length = 701
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSK-SVKGIPHNLQ 57
+LP I S+LDK S++RL++SYL+++ F + WS SP + S +G P +Q
Sbjct: 51 LLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFP--VQ 108
Query: 58 EGQ 60
EG+
Sbjct: 109 EGR 111
>gi|395508094|ref|XP_003758350.1| PREDICTED: endothelial PAS domain-containing protein 1
[Sarcophilus harrisii]
Length = 862
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++SQLDKASI+RL IS+L+
Sbjct: 41 LPLPHNVSSQLDKASIMRLAISFLR 65
>gi|533324|dbj|BAA03857.1| Ah receptor [Homo sapiens]
Length = 808
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|348501488|ref|XP_003438301.1| PREDICTED: endothelial PAS domain-containing protein 1
[Oreochromis niloticus]
Length = 879
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++++ LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHSVSAHLDKASIMRLAISFLRTR 67
>gi|269931465|gb|ACZ54252.1| aryl hydrocarbon receptor, partial [Stenella coeruleoalba]
Length = 662
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 2 LLPFPQDVVNKLDKLSVLRLSVSYLRAKSFFDVALKSIPGDRNGVQDNCRTKFREGL--N 59
Query: 56 LQEGQ 60
LQEG+
Sbjct: 60 LQEGE 64
>gi|334848123|ref|NP_001229341.1| aryl hydrocarbon receptor repressor isoform 2 [Homo sapiens]
gi|311033471|sp|A9YTQ3.3|AHRR_HUMAN RecName: Full=Aryl hydrocarbon receptor repressor; Short=AhR
repressor; Short=AhRR; AltName: Full=Class E basic
helix-loop-helix protein 77; Short=bHLHe77
Length = 701
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 54 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 83
>gi|297293915|ref|XP_002804341.1| PREDICTED: aryl hydrocarbon receptor repressor-like [Macaca
mulatta]
Length = 708
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|297288759|ref|XP_001103903.2| PREDICTED: aryl hydrocarbon receptor [Macaca mulatta]
Length = 877
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 80 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPAERNGGQENCRAANFREGLNL 139
Query: 57 QEGQ 60
QEG+
Sbjct: 140 QEGE 143
>gi|194209694|ref|XP_001496597.2| PREDICTED: aryl hydrocarbon receptor [Equus caballus]
Length = 947
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 158 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFREGL--N 215
Query: 56 LQEGQ 60
LQEG+
Sbjct: 216 LQEGE 220
>gi|162423760|gb|ABX89616.1| aryl hydrocarbon receptor repressor [Homo sapiens]
Length = 697
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|426385275|ref|XP_004059147.1| PREDICTED: aryl hydrocarbon receptor repressor [Gorilla gorilla
gorilla]
Length = 696
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|402871042|ref|XP_003899497.1| PREDICTED: aryl hydrocarbon receptor repressor [Papio anubis]
Length = 697
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|407316770|gb|AFU07567.1| hypoxia-inducible factor 2 alpha subunit [Polyodon spathula]
Length = 852
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++S LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHNVSSHLDKASIMRLAISFLRTR 67
>gi|11244871|gb|AAG33381.1| dioxin receptor repressor [Homo sapiens]
Length = 715
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|395859483|ref|XP_003802068.1| PREDICTED: aryl hydrocarbon receptor repressor [Otolemur garnettii]
Length = 730
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 83 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 112
>gi|355758752|gb|EHH61513.1| hypothetical protein EGM_21265, partial [Macaca fascicularis]
Length = 703
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 35 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 64
>gi|355691178|gb|EHH26363.1| hypothetical protein EGK_16313, partial [Macaca mulatta]
Length = 703
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 35 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 64
>gi|119571380|gb|EAW50995.1| hCG1985585, isoform CRA_b [Homo sapiens]
gi|119571381|gb|EAW50996.1| hCG1985585, isoform CRA_b [Homo sapiens]
Length = 715
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|397466338|ref|XP_003804920.1| PREDICTED: aryl hydrocarbon receptor repressor [Pan paniscus]
Length = 754
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 89 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 118
>gi|6330736|dbj|BAA86548.1| KIAA1234 protein [Homo sapiens]
Length = 727
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 62 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 91
>gi|441614619|ref|XP_003263236.2| PREDICTED: aryl hydrocarbon receptor repressor [Nomascus
leucogenys]
Length = 697
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|410900798|ref|XP_003963883.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 864
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++++ LDKASI+RL IS+L+ R
Sbjct: 41 LPLPHSVSAHLDKASIMRLAISFLRTR 67
>gi|251823727|ref|NP_001156422.1| hypoxia-inducible factor 3-alpha isoform 1 [Mus musculus]
Length = 664
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 74
>gi|121581812|dbj|BAF44519.1| hypoxia inducible factor 3 alpha [Mus musculus]
Length = 664
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 74
>gi|3859464|gb|AAC72734.1| hypoxia inducible factor three alpha [Mus musculus]
Length = 662
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 72
>gi|390460180|ref|XP_002745197.2| PREDICTED: aryl hydrocarbon receptor repressor [Callithrix
jacchus]
Length = 725
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 67 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 96
>gi|355747795|gb|EHH52292.1| Aryl hydrocarbon receptor [Macaca fascicularis]
Length = 809
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKASPAERNGGQENCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|290760626|gb|ADD59898.1| hypoxia-inducible factor 3 alpha [Mustelus canis]
Length = 468
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR 40
LPL ITS LDKA I+R+T+SYL++R PW++
Sbjct: 40 LPLSRRITSHLDKAGIMRVTLSYLRMRHLL---HSPWTK 75
>gi|119571377|gb|EAW50992.1| hCG2044128 [Homo sapiens]
gi|156229771|gb|AAI51853.1| AHRR protein [Homo sapiens]
gi|156230131|gb|AAI52407.1| AHRR protein [Homo sapiens]
gi|168269756|dbj|BAG10005.1| aryl-hydrocarbon receptor repressor [synthetic construct]
Length = 719
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 54 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 83
>gi|111306675|gb|AAI20588.1| Hypoxia inducible factor 3, alpha subunit [Mus musculus]
Length = 662
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 72
>gi|115430245|ref|NP_065782.2| aryl hydrocarbon receptor repressor isoform 1 [Homo sapiens]
gi|182888377|gb|AAI60162.1| Aryl-hydrocarbon receptor repressor [synthetic construct]
Length = 719
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 54 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 83
>gi|449493880|ref|XP_002190162.2| PREDICTED: aryl hydrocarbon receptor repressor-like [Taeniopygia
guttata]
Length = 759
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIVSKLDKLSVLRLSVSYLRVKSF 79
>gi|332864783|ref|XP_003318385.1| PREDICTED: aryl hydrocarbon receptor [Pan troglodytes]
gi|410227486|gb|JAA10962.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410260280|gb|JAA18106.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410307164|gb|JAA32182.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410335507|gb|JAA36700.1| aryl hydrocarbon receptor [Pan troglodytes]
Length = 850
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|148227427|ref|NP_001085718.1| endothelial PAS domain protein 1 [Xenopus laevis]
gi|49118238|gb|AAH73244.1| MGC80589 protein [Xenopus laevis]
Length = 862
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +I+S LDKASI+RL IS+L+
Sbjct: 41 LPLPQSISSHLDKASIMRLAISFLR 65
>gi|6650272|gb|AAF21782.1| hypoxia-inducible factor 3 alpha [Mus musculus]
Length = 630
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 72
>gi|426355558|ref|XP_004045184.1| PREDICTED: aryl hydrocarbon receptor [Gorilla gorilla gorilla]
Length = 850
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|170295859|ref|NP_058564.2| hypoxia-inducible factor 3-alpha isoform 2 [Mus musculus]
gi|341940802|sp|Q0VBL6.2|HIF3A_MOUSE RecName: Full=Hypoxia-inducible factor 3-alpha;
Short=HIF-3-alpha; Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=HIF3-alpha-1; AltName: Full=Inhibitory PAS domain
protein; Short=IPAS; AltName: Full=Member of PAS
protein 7
Length = 662
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 72
>gi|397509308|ref|XP_003825070.1| PREDICTED: aryl hydrocarbon receptor [Pan paniscus]
Length = 850
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|4502003|ref|NP_001612.1| aryl hydrocarbon receptor precursor [Homo sapiens]
gi|3041653|sp|P35869.2|AHR_HUMAN RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; AltName: Full=Class E basic helix-loop-helix
protein 76; Short=bHLHe76; Flags: Precursor
gi|416142|gb|AAA16210.1| AH-receptor [Homo sapiens]
gi|46854407|gb|AAH69390.1| Aryl hydrocarbon receptor [Homo sapiens]
gi|47682748|gb|AAH70080.1| AHR protein [Homo sapiens]
gi|51095037|gb|EAL24281.1| aryl hydrocarbon receptor [Homo sapiens]
gi|119614092|gb|EAW93686.1| aryl hydrocarbon receptor, isoform CRA_a [Homo sapiens]
gi|119614093|gb|EAW93687.1| aryl hydrocarbon receptor, isoform CRA_a [Homo sapiens]
gi|168275780|dbj|BAG10610.1| aryl hydrocarbon receptor precursor [synthetic construct]
Length = 848
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|351708262|gb|EHB11181.1| Aryl hydrocarbon receptor repressor [Heterocephalus glaber]
Length = 764
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 134 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 163
>gi|334312813|ref|XP_001382184.2| PREDICTED: endothelial PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 1354
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++SQLDKASI+RL IS+L+
Sbjct: 533 LPLPHNVSSQLDKASIMRLAISFLR 557
>gi|11968112|ref|NP_071973.1| hypoxia-inducible factor 3-alpha [Rattus norvegicus]
gi|81917470|sp|Q9JHS2.1|HIF3A_RAT RecName: Full=Hypoxia-inducible factor 3-alpha;
Short=HIF-3-alpha; Short=HIF3-alpha; AltName:
Full=HIF3-alpha-1
gi|8953575|emb|CAB96611.1| hypoxia inducible factor 3 alpha [Rattus norvegicus]
Length = 662
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LP +++ LDKASI+RLTISYL++ G+
Sbjct: 39 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 72
>gi|297680933|ref|XP_002818226.1| PREDICTED: aryl hydrocarbon receptor isoform 1 [Pongo abelii]
gi|395738695|ref|XP_003777137.1| PREDICTED: aryl hydrocarbon receptor isoform 2 [Pongo abelii]
Length = 850
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPAERNGGQDNCRAANFREGLNL 112
Query: 57 QEGQ 60
QEG+
Sbjct: 113 QEGE 116
>gi|417515445|gb|JAA53551.1| aryl hydrocarbon receptor [Sus scrofa]
Length = 848
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVSLKSSPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|119571382|gb|EAW50997.1| hCG1985585, isoform CRA_c [Homo sapiens]
Length = 134
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>gi|121484034|gb|ABM54339.1| EPAS1 [Pan paniscus]
gi|124054320|gb|ABM89373.1| EPAS1 [Pongo pygmaeus]
Length = 63
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 32 LPLPHSVSSHLDKASIMRLAISFLR 56
>gi|350588840|ref|XP_003130237.3| PREDICTED: aryl hydrocarbon receptor [Sus scrofa]
Length = 900
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 104 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVSLKSSPADRNGVQDNCRTKFREGL--N 161
Query: 56 LQEGQ 60
LQEG+
Sbjct: 162 LQEGE 166
>gi|40849967|gb|AAR95698.1| hypoxia-inducible factor-4alpha [Ctenopharyngodon idella]
Length = 643
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP ITS LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRITSHLDKAAIMRVTLSYLRM 65
>gi|444732372|gb|ELW72670.1| Aryl hydrocarbon receptor repressor [Tupaia chinensis]
Length = 869
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+++ F
Sbjct: 67 LLPFPPDVISKLDKLSVLRLSVSYLRVKSF 96
>gi|444519553|gb|ELV12868.1| Aryl hydrocarbon receptor [Tupaia chinensis]
Length = 657
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRD---GPSPSKSVKGIPHNLQ 57
+LP P + ++LDK S++RL++SYL+ + F P D G S S NLQ
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKPSPADRNGGQDNSTSKFREDLNLQ 112
Query: 58 EGQ 60
EG+
Sbjct: 113 EGE 115
>gi|329664848|ref|NP_001192955.1| aryl hydrocarbon receptor [Bos taurus]
gi|296488653|tpg|DAA30766.1| TPA: aryl hydrocarbon receptor [Bos taurus]
Length = 844
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPPDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|348545354|ref|XP_003460145.1| PREDICTED: hypothetical protein LOC100696058 [Oreochromis
niloticus]
Length = 694
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL +SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLAVSYLRVKSF 79
>gi|297265931|ref|XP_001112947.2| PREDICTED: endothelial PAS domain-containing protein 1 isoform 3
[Macaca mulatta]
Length = 832
Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++S LDKASI+RL IS+L+ G+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLRTHKLLSSGN 74
>gi|348552672|ref|XP_003462151.1| PREDICTED: aryl hydrocarbon receptor repressor-like [Cavia
porcellus]
Length = 656
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLSVSYLRVKSF 79
>gi|317419739|emb|CBN81775.1| Aryl hydrocarbon receptor repressor [Dicentrarchus labrax]
Length = 695
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL +SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLAVSYLRVKSF 79
>gi|410926962|ref|XP_003976937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 342
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLK 26
+LPLP ++T LDK S+IRLT+SY++
Sbjct: 33 LLPLPPSVTRTLDKPSVIRLTLSYMR 58
>gi|83817009|ref|NP_001033045.1| aryl hydrocarbon receptor repressor [Takifugu rubripes]
gi|68349481|gb|AAY96634.1| aryl hydrocarbon receptor repressor [Takifugu rubripes]
Length = 691
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL +SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLAVSYLRVKSF 79
>gi|432927325|ref|XP_004080970.1| PREDICTED: uncharacterized protein LOC101166260 [Oryzias latipes]
Length = 687
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL +SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLAVSYLRVKSF 79
>gi|47195825|emb|CAG14242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 64
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPLP ++++ LDKASI+RL IS+L+ R
Sbjct: 33 LPLPHSVSAHLDKASIMRLAISFLRTRKL 61
>gi|449275027|gb|EMC84022.1| Aryl hydrocarbon receptor repressor, partial [Columba livia]
Length = 744
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 51 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 80
>gi|270008138|gb|EFA04586.1| hypoxia inducible factor 1, alpha subunit [Tribolium castaneum]
Length = 879
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LP+ SQLDKAS++RL I+YL++RD
Sbjct: 129 LPISQEQVSQLDKASVMRLAIAYLRVRDM 157
>gi|120419452|gb|ABM21545.1| endothelial PAS domain protein 1 [Bos taurus]
Length = 462
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 42 LPLPHSVSSHLDKASIMRLAISFLR 66
>gi|189237669|ref|XP_967427.2| PREDICTED: similar to hypoxia-inducible factor 1 alpha [Tribolium
castaneum]
Length = 795
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LP+ SQLDKAS++RL I+YL++RD
Sbjct: 45 LPISQEQVSQLDKASVMRLAIAYLRVRDM 73
>gi|440908310|gb|ELR58343.1| Aryl hydrocarbon receptor [Bos grunniens mutus]
Length = 844
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPPDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFREGL--N 110
Query: 56 LQEGQ 60
LQEG+
Sbjct: 111 LQEGE 115
>gi|344270614|ref|XP_003407139.1| PREDICTED: aryl hydrocarbon receptor-like [Loxodonta africana]
Length = 847
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG---PSPSKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGGQDNCRTKVREGL--N 110
Query: 56 LQEGQ 60
QEG+
Sbjct: 111 FQEGE 115
>gi|19073078|gb|AAL84708.1|AF443441_1 aryl hydrocarbon receptor repressor [Fundulus heteroclitus]
Length = 680
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL +SYL+++ F
Sbjct: 50 LLPFPPDVISKLDKLSVLRLAVSYLRVKSF 79
>gi|403282309|ref|XP_003932595.1| PREDICTED: aryl hydrocarbon receptor repressor [Saimiri
boliviensis boliviensis]
Length = 718
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+++ F
Sbjct: 60 LLPFPPDVISKLDKLSVLRLSVSYLRVKSF 89
>gi|19716307|gb|AAL95711.1|AF402782_1 hypoxia-inducible factor 2 alpha [Fundulus heteroclitus]
Length = 873
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LP+P ++++ LDKASI+RL IS+L+ R
Sbjct: 41 LPMPHSVSAHLDKASIMRLAISFLRTR 67
>gi|426335428|ref|XP_004029224.1| PREDICTED: endothelial PAS domain-containing protein 1 [Gorilla
gorilla gorilla]
Length = 132
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|296240121|gb|ADH01742.1| hypoxia-inducible factor 2 alpha [Callionymus valenciennei]
Length = 782
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +I+ LDKASI+RL IS+L+ R
Sbjct: 41 LPLPESISLHLDKASIMRLAISFLRTR 67
>gi|83375598|gb|AAC60338.2| aryl hydrocarbon receptor [Petromyzon marinus]
Length = 1076
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
MLP P + ++LDK SI+RL++SYL+ + +
Sbjct: 53 MLPFPQDVVAKLDKLSILRLSVSYLRAKTY 82
>gi|17432319|gb|AAL39015.1|AF416641_1 inhibitory PAS domain protein [Mus musculus]
Length = 307
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
LP +++ LDKASI+RLTISYL++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLRMHRLCAAG 73
>gi|119571379|gb|EAW50994.1| hCG1985585, isoform CRA_a [Homo sapiens]
Length = 139
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD-FSGHG 34
+LP P I S+LDK S++RL++SYL+++ F G G
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQGQG 84
>gi|291401037|ref|XP_002716904.1| PREDICTED: AHR2 protein-like [Oryctolagus cuniculus]
Length = 926
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 14/63 (22%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--------SGH-GDPPWSRDGPSPSKSVKG 51
+LP P + ++LDK SI+RLT+ YLK++ + GH DPP +P +S
Sbjct: 150 LLPFPEDVCTRLDKLSILRLTVGYLKVKGYLAGKVQNHPGHLADPPI-----NPGRSANN 204
Query: 52 IPH 54
P
Sbjct: 205 FPQ 207
>gi|318217867|ref|NP_001187163.1| HIF 2 alpha [Ictalurus punctatus]
gi|116829910|gb|ABK27926.1| HIF 2 alpha [Ictalurus punctatus]
Length = 816
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|295001556|gb|ADF58783.1| hypoxia-inducible factor 3 alpha subunit isoform 1 [Danio rerio]
Length = 626
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP I S LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRIASHLDKAAIMRVTLSYLRM 65
>gi|37594329|gb|AAQ94179.1| Hif3a [Danio rerio]
Length = 626
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP I S LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRIASHLDKAAIMRVTLSYLRM 65
>gi|407316782|gb|AFU07573.1| hypoxia-inducible factor 3 alpha subunit [Gymnocypris namensis]
Length = 594
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDP 36
LPLP I S LDKA+I+R+T+S+L++ G P
Sbjct: 40 LPLPRRIASHLDKAAIMRVTLSFLRMNRLIQSGGP 74
>gi|301753236|ref|XP_002912483.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 1022
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 195 LPLPHSVSSHLDKASIMRLAISFLR 219
>gi|332227348|ref|XP_003262854.1| PREDICTED: endothelial PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 877
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 49 LPLPHSVSSHLDKASIMRLAISFLR 73
>gi|47225181|emb|CAF98808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 109
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD-FSGHG 34
+LP P + S+LDK S++RL +SYL+++ F G G
Sbjct: 62 LLPFPPDVISKLDKLSVLRLAVSYLRVKSFFQGRG 96
>gi|426226414|ref|XP_004007338.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Ovis aries]
Length = 853
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 57 LPLPHSVSSHLDKASIMRLAISFLR 81
>gi|354503088|ref|XP_003513613.1| PREDICTED: endothelial PAS domain-containing protein 1
[Cricetulus griseus]
gi|344258028|gb|EGW14132.1| Endothelial PAS domain-containing protein 1 [Cricetulus griseus]
Length = 878
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 45 LPLPHSVSSHLDKASIMRLAISFLR 69
>gi|344291845|ref|XP_003417640.1| PREDICTED: endothelial PAS domain-containing protein 1 [Loxodonta
africana]
Length = 891
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 63 LPLPHSVSSHLDKASIMRLAISFLR 87
>gi|431912714|gb|ELK14732.1| Endothelial PAS domain-containing protein 1 [Pteropus alecto]
Length = 884
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 55 LPLPHSVSSHLDKASIMRLAISFLR 79
>gi|62822155|gb|AAY14704.1| unknown [Homo sapiens]
Length = 861
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 32 LPLPHSVSSHLDKASIMRLAISFLR 56
>gi|397504232|ref|XP_003822706.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pan
paniscus]
Length = 870
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|355565669|gb|EHH22098.1| hypothetical protein EGK_05296 [Macaca mulatta]
gi|355751289|gb|EHH55544.1| hypothetical protein EGM_04774 [Macaca fascicularis]
gi|384945768|gb|AFI36489.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
gi|384945770|gb|AFI36490.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|333610041|gb|AEF59497.1| hypoxia-inducible factor 2 alpha [Lepisosteus oculatus]
Length = 315
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++S LDKASI+RL+IS+L+
Sbjct: 34 LPLPHNVSSHLDKASIMRLSISFLR 58
>gi|380810424|gb|AFE77087.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|348518131|ref|XP_003446585.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 840
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEDVISSLDKLSILRLSVSYLRTKSF 74
>gi|114577233|ref|XP_001147219.1| PREDICTED: endothelial PAS domain-containing protein 1 isoform 4
[Pan troglodytes]
gi|410265254|gb|JAA20593.1| endothelial PAS domain protein 1 [Pan troglodytes]
gi|410350683|gb|JAA41945.1| endothelial PAS domain protein 1 [Pan troglodytes]
Length = 870
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|40254439|ref|NP_001421.2| endothelial PAS domain-containing protein 1 [Homo sapiens]
gi|32470617|sp|Q99814.3|EPAS1_HUMAN RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP2; AltName: Full=Class E basic
helix-loop-helix protein 73; Short=bHLHe73; AltName:
Full=HIF-1-alpha-like factor; Short=HLF; AltName:
Full=Hypoxia-inducible factor 2-alpha;
Short=HIF-2-alpha; Short=HIF2-alpha; AltName:
Full=Member of PAS protein 2; AltName: Full=PAS
domain-containing protein 2
gi|30410995|gb|AAH51338.1| Endothelial PAS domain protein 1 [Homo sapiens]
gi|119620660|gb|EAX00255.1| endothelial PAS domain protein 1 [Homo sapiens]
gi|168277630|dbj|BAG10793.1| endothelial PAS domain-containing protein 1 [synthetic construct]
Length = 870
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|1695801|gb|AAC51212.1| MOP2 [Homo sapiens]
Length = 870
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|27807411|ref|NP_777150.1| endothelial PAS domain-containing protein 1 [Bos taurus]
gi|5019614|dbj|BAA78676.1| endothelial PAS domain protein 1/hypoxia-inducible factor-2 alpha
[Bos taurus]
Length = 870
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|12831205|ref|NP_075578.1| endothelial PAS domain-containing protein 1 [Rattus norvegicus]
gi|32469610|sp|Q9JHS1.1|EPAS1_RAT RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
gi|8953577|emb|CAB96612.1| hypoxia inducible factor 2 alpha [Rattus norvegicus]
Length = 874
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|297667706|ref|XP_002812111.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pongo
abelii]
Length = 869
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|281352631|gb|EFB28215.1| hypothetical protein PANDA_000205 [Ailuropoda melanoleuca]
Length = 860
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 33 LPLPHSVSSHLDKASIMRLAISFLR 57
>gi|156361155|ref|XP_001625385.1| predicted protein [Nematostella vectensis]
gi|156212216|gb|EDO33285.1| predicted protein [Nematostella vectensis]
Length = 143
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P ++LDK SI+RLT+SYL+ + F
Sbjct: 20 LLPFPEETVTKLDKISILRLTVSYLRAKSF 49
>gi|149050487|gb|EDM02660.1| endothelial PAS domain protein 1 [Rattus norvegicus]
Length = 873
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|338714031|ref|XP_001498492.3| PREDICTED: endothelial PAS domain-containing protein 1 [Equus
caballus]
Length = 877
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 47 LPLPHSVSSHLDKASIMRLAISFLR 71
>gi|14669840|dbj|BAB62011.1| AHR1 beta [Oryzias latipes]
Length = 783
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEDVISSLDKLSILRLSVSYLRTKSF 74
>gi|157278096|ref|NP_001098148.1| aryl hydrocarbon receptor [Oryzias latipes]
gi|14669838|dbj|BAB62010.1| AHR1 alpha [Oryzias latipes]
gi|14669842|dbj|BAB62012.1| AHR1 alpha [Oryzias latipes]
Length = 879
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S LDK SI+RL++SYL+ + F
Sbjct: 45 LLPFPEDVISSLDKLSILRLSVSYLRTKSF 74
>gi|403269576|ref|XP_003926799.1| PREDICTED: endothelial PAS domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 867
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|296223954|ref|XP_002757844.1| PREDICTED: endothelial PAS domain-containing protein 1
[Callithrix jacchus]
Length = 867
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|148745435|gb|AAI42230.1| Endothelial PAS domain protein 1 [Bos taurus]
gi|296482559|tpg|DAA24674.1| TPA: endothelial PAS domain protein 1 [Bos taurus]
Length = 870
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|417405041|gb|JAA49246.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 870
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|178057356|ref|NP_034267.3| endothelial PAS domain-containing protein 1 [Mus musculus]
gi|3914285|sp|P97481.2|EPAS1_MOUSE RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=HIF-1-alpha-like factor;
Short=HLF; Short=mHLF; AltName: Full=HIF-related
factor; Short=HRF; AltName: Full=Hypoxia-inducible
factor 2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
Length = 874
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|2117020|dbj|BAA20130.1| mHLF [Mus musculus]
Length = 874
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|34785558|gb|AAH57870.1| Endothelial PAS domain protein 1 [Mus musculus]
gi|74153020|dbj|BAE34506.1| unnamed protein product [Mus musculus]
gi|148706668|gb|EDL38615.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 874
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|395540467|ref|XP_003772176.1| PREDICTED: aryl hydrocarbon receptor-like [Sarcophilus harrisii]
Length = 725
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 63 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 92
>gi|355686181|gb|AER97972.1| endothelial PAS domain protein 1 [Mustela putorius furo]
Length = 859
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 32 LPLPHSVSSHLDKASIMRLAISFLR 56
>gi|440906166|gb|ELR56466.1| Endothelial PAS domain-containing protein 1 [Bos grunniens mutus]
Length = 873
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 44 LPLPHSVSSHLDKASIMRLAISFLR 68
>gi|2895756|gb|AAC12871.1| hypoxia-inducible factor 1 alpha related factor [Mus musculus]
Length = 874
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|1805270|gb|AAB41496.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 875
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|351715378|gb|EHB18297.1| Endothelial PAS domain-containing protein 1, partial
[Heterocephalus glaber]
Length = 862
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 33 LPLPHSVSSHLDKASIMRLAISFLR 57
>gi|334325016|ref|XP_001365696.2| PREDICTED: aryl hydrocarbon receptor-like [Monodelphis domestica]
Length = 595
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK SI+RLT+ YLK++ +
Sbjct: 51 LLPFPEDVQARLDKLSILRLTVGYLKVKSY 80
>gi|148228022|ref|NP_001090889.1| endothelial PAS domain-containing protein 1 [Sus scrofa]
gi|125634700|gb|ABN48508.1| hypoxia-inducible factor 2 alpha [Sus scrofa]
Length = 871
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLAISFLR 65
>gi|149051129|gb|EDM03302.1| rCG61977, isoform CRA_b [Rattus norvegicus]
Length = 853
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 81
>gi|327275175|ref|XP_003222349.1| PREDICTED: aryl hydrocarbon receptor repressor-like [Anolis
carolinensis]
Length = 715
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I ++LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIIAKLDKLSVLRLSVSYLRVKSF 79
>gi|149051131|gb|EDM03304.1| rCG61977, isoform CRA_c [Rattus norvegicus]
Length = 810
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 81
>gi|149051128|gb|EDM03301.1| rCG61977, isoform CRA_a [Rattus norvegicus]
gi|149051130|gb|EDM03303.1| rCG61977, isoform CRA_a [Rattus norvegicus]
Length = 815
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 81
>gi|66730503|ref|NP_001019456.1| aryl hydrocarbon receptor repressor [Rattus norvegicus]
gi|81864909|sp|Q75NT5.1|AHRR_RAT RecName: Full=Aryl hydrocarbon receptor repressor; Short=AhR
repressor; Short=AhRR
gi|60729703|pir||JC8065 aryl hydrocarbon receptor repressor - rat
gi|38260701|gb|AAR15509.1| aryl-hydrocarbon receptor repressor [Rattus norvegicus]
gi|45736605|dbj|BAD13341.1| AhR repressor [Rattus norvegicus]
gi|149032825|gb|EDL87680.1| aryl-hydrocarbon receptor repressor [Rattus norvegicus]
Length = 701
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPS-KSVKGIPHNLQ 57
+LP I S+LDK S++RL++SYL+++ F + WS SP S +G P +Q
Sbjct: 51 LLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEDHSSRGFP--VQ 108
Query: 58 EGQ 60
EG+
Sbjct: 109 EGR 111
>gi|410954769|ref|XP_003984034.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Felis catus]
Length = 907
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 81 LPLPHSVSSHLDKASIMRLAISFLR 105
>gi|297287356|ref|XP_002803147.1| PREDICTED: hypothetical protein LOC100423621 [Macaca mulatta]
Length = 1053
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++D+
Sbjct: 88 LLPFPEDVRARLDKLSVLRLIVGYLKVKDY 117
>gi|402862083|ref|XP_003895399.1| PREDICTED: uncharacterized protein LOC101003577 [Papio anubis]
Length = 1053
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++D+
Sbjct: 88 LLPFPEDVRARLDKLSVLRLIVGYLKVKDY 117
>gi|391224603|gb|AFM37575.1| hypoxia inducible factor, alpha subunit [Trichoplax adhaerens]
Length = 548
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGIPHNLQEGQD 61
LPLP A S+LDK+S+IRL Y+ R+ + G S +PH L+ D
Sbjct: 48 LPLPFATVSKLDKSSVIRLATGYMLCRELAKFG------------LSKADLPHGLKNAYD 95
>gi|348539806|ref|XP_003457380.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 978
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++ YL+++ F
Sbjct: 52 LLPFPEEVRSRLDKLSVLRLSVGYLRVKSF 81
>gi|1805268|gb|AAB41495.1| endothelial PAS domain protein 1 [Homo sapiens]
Length = 870
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHSVSSHLDKASIMRLEISFLR 65
>gi|291386847|ref|XP_002709777.1| PREDICTED: endothelial PAS domain protein 1 [Oryctolagus cuniculus]
Length = 1006
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 181 LPLPHSVSSHLDKASIMRLAISFLR 205
>gi|334349161|ref|XP_003342158.1| PREDICTED: aryl hydrocarbon receptor-like [Monodelphis domestica]
Length = 833
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 54 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 83
>gi|196005051|ref|XP_002112392.1| hypothetical protein TRIADDRAFT_56360 [Trichoplax adhaerens]
gi|190584433|gb|EDV24502.1| hypothetical protein TRIADDRAFT_56360 [Trichoplax adhaerens]
Length = 479
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGIPHNLQEGQD 61
LPLP A S+LDK+S+IRL Y+ R+ + G S +PH L+ D
Sbjct: 48 LPLPFATVSKLDKSSVIRLATGYMLCRELAKFG------------LSKADLPHGLKNAYD 95
>gi|345329324|ref|XP_001514645.2| PREDICTED: aryl hydrocarbon receptor-like [Ornithorhynchus
anatinus]
Length = 806
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++SYL+ + F
Sbjct: 73 LLPFPQDVISKLDKLSVLRLSVSYLRAKSF 102
>gi|291224360|ref|XP_002732173.1| PREDICTED: AGAP010058-PA-like, partial [Saccoglossus kowalevskii]
Length = 57
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LP P ITS+L K SIIRLT SYL+++
Sbjct: 25 LLPFPDEITSKLHKGSIIRLTTSYLRIK 52
>gi|59933250|ref|NP_001012371.1| hypoxia-inducible factor 1, alpha subunit, like 2 [Danio rerio]
gi|57164638|gb|AAW34262.1| hypoxia inducible factor alpha-like protein [Danio rerio]
Length = 523
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPL ++ Q DKAS+IRLTI+YL LR
Sbjct: 61 LLPLDLSMDGQRDKASVIRLTIAYLHLR 88
>gi|449270823|gb|EMC81472.1| Endothelial PAS domain-containing protein 1 [Columba livia]
Length = 874
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP I+S LDKASI+RL IS+L+
Sbjct: 43 LPLPHNISSHLDKASIMRLAISFLR 67
>gi|327280975|ref|XP_003225226.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Anolis carolinensis]
Length = 871
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP I+S LDKASI+RL IS+L+
Sbjct: 41 LPLPHNISSHLDKASIMRLAISFLR 65
>gi|27348120|dbj|BAC45235.1| arylhydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH---- 54
+LP P + ++LDK S++RL++SYL+ + F P R+G + G P
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTDRNG---GQDDCGAPFRSRL 109
Query: 55 NLQEGQ 60
NLQEG+
Sbjct: 110 NLQEGE 115
>gi|290563759|ref|NP_001166525.1| aryl hydrocarbon receptor [Cavia porcellus]
gi|15080956|gb|AAK27312.1| aryl hydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH---- 54
+LP P + ++LDK S++RL++SYL+ + F P R+G + G P
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTDRNG---GQDDCGAPFRSRL 109
Query: 55 NLQEGQ 60
NLQEG+
Sbjct: 110 NLQEGE 115
>gi|47571343|gb|AAT35817.1| aryl hydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH---- 54
+LP P + ++LDK S++RL++SYL+ + F P R+G + G P
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTDRNG---GQDDCGAPFRSRL 109
Query: 55 NLQEGQ 60
NLQEG+
Sbjct: 110 NLQEGE 115
>gi|449496328|ref|XP_002194260.2| PREDICTED: endothelial PAS domain-containing protein 1
[Taeniopygia guttata]
Length = 878
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP I+S LDKASI+RL IS+L+
Sbjct: 68 LPLPHNISSHLDKASIMRLAISFLR 92
>gi|443733742|gb|ELU17982.1| hypothetical protein CAPTEDRAFT_50984, partial [Capitella teleta]
Length = 101
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGI 52
LP+ + +QLDKASI+R+ IS+L+LR G D S SK+V+G
Sbjct: 30 LPVAPSTLAQLDKASIMRVAISHLRLRKLFGFQDKMDS----FYSKAVEGF 76
>gi|196016918|ref|XP_002118308.1| hypothetical protein TRIADDRAFT_62354 [Trichoplax adhaerens]
gi|190579084|gb|EDV19188.1| hypothetical protein TRIADDRAFT_62354 [Trichoplax adhaerens]
Length = 340
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LP+ + + QLDKA++IRL IS LKLR
Sbjct: 28 LLPIISDVARQLDKAAVIRLAISVLKLR 55
>gi|185133244|ref|NP_001117723.1| aryl hydrocarbon receptor alpha [Oncorhynchus mykiss]
gi|22134435|gb|AAC95335.2| aryl hydrocarbon receptor alpha [Oncorhynchus mykiss]
Length = 1058
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++R+++ YLK++ F
Sbjct: 51 LLPFPEDVRSRLDKLSVLRISVGYLKVKSF 80
>gi|18762711|gb|AAL78059.1| arylhydrocarbon receptor [Bos taurus]
Length = 201
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSP---SKSVKGIPHN 55
+LP P + ++LDK S++RL++SYL+ + F P R+G +K +G+ N
Sbjct: 24 LLPFPPDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFREGL--N 81
Query: 56 LQEGQ 60
LQEG+
Sbjct: 82 LQEGE 86
>gi|170035204|ref|XP_001845461.1| hypoxia-inducible factor [Culex quinquefasciatus]
gi|167877013|gb|EDS40396.1| hypoxia-inducible factor [Culex quinquefasciatus]
Length = 376
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD 29
+LP+P LDKAS++RL+I++L++RD
Sbjct: 33 LLPMPQEDVEHLDKASVMRLSIAFLRVRD 61
>gi|185133371|ref|NP_001117156.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
gi|37788920|gb|AAP46168.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
Length = 1071
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++R+++ YLK++ F
Sbjct: 51 LLPFPEDVRSRLDKLSVLRISVGYLKVKSF 80
>gi|56800652|gb|AAW31092.1| SIMA, partial [Eurosta solidaginis]
Length = 238
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL +QLDKASI+R+ I++LK+RD
Sbjct: 24 ILPLRKEDVTQLDKASIMRIAIAFLKVRDM 53
>gi|84626363|gb|ABC59722.1| hypoxia-inducible factor 1 alpha subunit [Urocitellus parryii]
Length = 36
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 ITSQLDKASIIRLTISYLKLRDFSGHGD 35
++S LDKAS++RLTISYL++R GD
Sbjct: 3 VSSHLDKASVMRLTISYLRVRKLLDAGD 30
>gi|326922317|ref|XP_003207396.1| PREDICTED: aryl hydrocarbon receptor-like [Meleagris gallopavo]
Length = 832
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++ DK SI+RL + YLK++++
Sbjct: 45 LLPFPEDVCTRFDKVSILRLVVGYLKVKNY 74
>gi|195574995|ref|XP_002105468.1| similar [Drosophila simulans]
gi|194201395|gb|EDX14971.1| similar [Drosophila simulans]
Length = 1493
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|318037285|ref|NP_001187141.1| hypoxia induced factor-like factor [Ictalurus punctatus]
gi|73426664|gb|AAZ75953.1| hypoxia induced factor-like factor [Ictalurus punctatus]
Length = 627
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPL ITS LDKA I+R+T+SYL++R
Sbjct: 40 LPLSRRITSHLDKAGIMRVTLSYLRMR 66
>gi|1174074|gb|AAC47303.1| similar [Drosophila melanogaster]
Length = 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|407316768|gb|AFU07566.1| hypoxia-inducible factor 2 alpha subunit [Gymnocypris namensis]
Length = 830
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPL + +S LDKASI+RL ISYL+ R
Sbjct: 41 LPLSNSTSSHLDKASIMRLAISYLRTR 67
>gi|198449612|ref|XP_001357647.2| GA20714 [Drosophila pseudoobscura pseudoobscura]
gi|198130685|gb|EAL26781.2| GA20714 [Drosophila pseudoobscura pseudoobscura]
Length = 1559
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL +QLDKAS++R+TI++LK+R+
Sbjct: 89 VLPLKNDDVNQLDKASVMRITIAFLKIREM 118
>gi|223468713|gb|ACM89953.1| RE63002p [Drosophila melanogaster]
Length = 1507
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|195505070|ref|XP_002099350.1| GE10859 [Drosophila yakuba]
gi|194185451|gb|EDW99062.1| GE10859 [Drosophila yakuba]
Length = 1517
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 97 LPLKTDDVNQLDKASVMRITIAFLKIREM 125
>gi|24651293|ref|NP_524584.2| similar, isoform A [Drosophila melanogaster]
gi|13124829|sp|Q24167.2|SIMA_DROME RecName: Full=Protein similar
gi|10726861|gb|AAF57008.2| similar, isoform A [Drosophila melanogaster]
Length = 1507
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|21483612|gb|AAM52781.1| SD25933p [Drosophila melanogaster]
Length = 403
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|262399170|dbj|BAI48787.1| Aryl hydrocarbon receptor [Apodemus speciosus]
Length = 849
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDG--PSPSKSVKGIPHNL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G ++ P +L
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNGGQDHSRTQIRACP-DL 110
Query: 57 QEGQ 60
QEG+
Sbjct: 111 QEGE 114
>gi|54650876|gb|AAV37017.1| GH16921p [Drosophila melanogaster]
Length = 776
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIREM 127
>gi|195341439|ref|XP_002037317.1| GM12862 [Drosophila sechellia]
gi|194131433|gb|EDW53476.1| GM12862 [Drosophila sechellia]
Length = 1276
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 101 LPLKTDDVNQLDKASVMRITIAFLKIREM 129
>gi|6644408|gb|AAF21052.1|AF212989_1 hypoxia-inducible factor 2 alpha [Coturnix coturnix]
Length = 870
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHNVSSHLDKASIMRLAISFLR 65
>gi|449273277|gb|EMC82821.1| Aryl hydrocarbon receptor, partial [Columba livia]
Length = 733
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
MLP P + QLDK S++RL + YLK++ +
Sbjct: 32 MLPFPEDVRIQLDKLSVLRLAVGYLKVKSY 61
>gi|225581189|gb|ACN94757.1| GA20714 [Drosophila miranda]
Length = 1575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL +QLDKAS++R+TI++LK+R+
Sbjct: 93 VLPLKNDDVNQLDKASVMRITIAFLKIREM 122
>gi|224045215|ref|XP_002188964.1| PREDICTED: aryl hydrocarbon receptor [Taeniopygia guttata]
Length = 862
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|195159266|ref|XP_002020503.1| GL14029 [Drosophila persimilis]
gi|194117272|gb|EDW39315.1| GL14029 [Drosophila persimilis]
Length = 1525
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LPL +QLDKAS++R+TI++LK+R+
Sbjct: 89 VLPLKNDDVNQLDKASVMRITIAFLKIREM 118
>gi|107051811|gb|ABF83561.1| hypoxia-inducible factor alpha [Metacarcinus magister]
Length = 1047
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHG 34
+LPL SQLDKASI+RLTI+ L LR G
Sbjct: 51 VLPLSEQTLSQLDKASIMRLTIAILHLRSVCETG 84
>gi|61652852|gb|AAX48002.1| hypoxia-inducible factor 1alpha [Pusa hispida]
Length = 97
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 ITSQLDKASIIRLTISYLKLRDFSGHGD 35
++S LDKAS++RLTISYL++R GD
Sbjct: 3 VSSHLDKASVMRLTISYLRVRKLLDAGD 30
>gi|38194176|dbj|BAD01477.1| aryl hydrocarbon receptor 1 [Phalacrocorax carbo]
Length = 860
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|395829787|ref|XP_003788024.1| PREDICTED: endothelial PAS domain-containing protein 1 [Otolemur
garnettii]
Length = 912
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++++ LDKASI+RL IS+L+ +
Sbjct: 89 LPLPHSVSAHLDKASIMRLAISFLRTQ 115
>gi|46048879|ref|NP_990138.1| endothelial PAS domain-containing protein 1 [Gallus gallus]
gi|5051910|gb|AAD38358.1|AF129813_1 endothelial PAS domain protein 1 [Gallus gallus]
Length = 867
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++S LDKASI+RL IS+L+
Sbjct: 41 LPLPHNVSSHLDKASIMRLAISFLR 65
>gi|444730767|gb|ELW71141.1| Hypoxia-inducible factor 3-alpha [Tupaia chinensis]
Length = 669
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL-RDFSGHGDP 36
LP +++ LDKASI+RLTISYL++ R + G P
Sbjct: 40 LPFARGVSAHLDKASIMRLTISYLRMHRLCAARGRP 75
>gi|7839652|gb|AAF70373.1|AF260832_1 aryl hydrocarbon receptor [Gallus gallus]
Length = 858
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|9438131|gb|AAF87578.1|AF275721_1 AH receptor [Mesocricetus auratus]
Length = 920
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|346227234|ref|NP_001230919.1| aryl hydrocarbon receptor [Cricetulus griseus]
gi|27348124|dbj|BAC45237.1| Ah receptor [Cricetulus griseus]
Length = 941
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|326921855|ref|XP_003207170.1| PREDICTED: aryl hydrocarbon receptor [Meleagris gallopavo]
Length = 911
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 102 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 131
>gi|226316367|gb|ACO44647.1| aryl hydrocarbon receptor, partial [Oncorhynchus tshawytscha]
Length = 124
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++R+++ YLK++ F
Sbjct: 36 LLPFPEDVRSRLDKLSVLRISVGYLKVKSF 65
>gi|403295604|ref|XP_003938726.1| PREDICTED: aryl hydrocarbon receptor [Saimiri boliviensis
boliviensis]
Length = 848
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|326915260|ref|XP_003203937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Meleagris gallopavo]
Length = 944
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP ++S LDKASI+RL IS+L+
Sbjct: 117 LPLPHNVSSHLDKASIMRLAISFLR 141
>gi|73976458|ref|XP_532485.2| PREDICTED: aryl hydrocarbon receptor [Canis lupus familiaris]
Length = 853
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|226316389|gb|ACO44658.1| aryl hydrocarbon receptor, partial [Oncorhynchus nerka]
Length = 124
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++R+++ YLK++ F
Sbjct: 36 LLPFPEDVRSRLDKLSVLRISVGYLKVKSF 65
>gi|156394393|ref|XP_001636810.1| predicted protein [Nematostella vectensis]
gi|156223917|gb|EDO44747.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + +LDK SI+RL+ SYL+ ++F
Sbjct: 13 LLPFPHDVIQKLDKLSILRLSASYLRAKNF 42
>gi|351711777|gb|EHB14696.1| Aryl hydrocarbon receptor [Heterocephalus glaber]
Length = 863
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 73 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 102
>gi|410952410|ref|XP_003982873.1| PREDICTED: aryl hydrocarbon receptor [Felis catus]
Length = 858
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|336111706|gb|AEI16513.1| aryl hydrocarbon receptor repressor [Chelon labrosus]
Length = 138
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSR 40
LP P + S+LDK S++RL +SYL+++ F SR
Sbjct: 12 LPFPPDVISKLDKLSVLRLAVSYLRVKSFFQANQEKTSR 50
>gi|34850159|dbj|BAC87796.1| Aryl Hydrocarbon Receptor 2 [Phoebastria nigripes]
Length = 925
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK SI+RL + YLK++ +
Sbjct: 45 LLPFPEDVCTRLDKLSILRLAVGYLKVKSY 74
>gi|281349200|gb|EFB24784.1| hypothetical protein PANDA_005677 [Ailuropoda melanoleuca]
Length = 814
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 32 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 61
>gi|24210861|gb|AAN52083.1| aryl hydrocarbon receptor [Peromyscus maniculatus]
Length = 921
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|507172|gb|AAA19451.1| Ah receptor [Rattus norvegicus]
Length = 853
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|325513895|gb|ADZ23996.1| hypoxia-inducible factor 3a [Myxocyprinus asiaticus]
Length = 632
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP I S LDKA+I+R+T+SYL++
Sbjct: 40 LPLPRRIASHLDKAAIMRVTLSYLRM 65
>gi|301764064|ref|XP_002917450.1| PREDICTED: aryl hydrocarbon receptor-like [Ailuropoda
melanoleuca]
Length = 836
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 54 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 83
>gi|210063637|gb|ACJ06577.1| aryl hydrocarbon receptor [Neovison vison]
Length = 306
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 14 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 43
>gi|21165537|dbj|BAB88683.2| aryl hydrocarbon receptor [Phoca sibirica]
Length = 843
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|301607501|ref|XP_002933348.1| PREDICTED: aryl hydrocarbon receptor [Xenopus (Silurana)
tropicalis]
Length = 846
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPDDIISKLDKLSVLRLSVSYLRAKGF 82
>gi|6524996|gb|AAF15279.1|AF192501_1 aryl hydrocarbon receptor [Anas platyrhynchos]
Length = 304
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 13 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 42
>gi|29337195|sp|P41738.2|AHR_RAT RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|158933889|emb|CAP16662.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 853
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|3561054|gb|AAC35169.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|3561056|gb|AAC35170.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933881|emb|CAP16658.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933883|emb|CAP16659.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933885|emb|CAP16660.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933887|emb|CAP16661.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 815
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|15528541|dbj|BAB64569.1| aryl hydrocarbon receptor [Phoca vitulina]
Length = 843
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|29337198|sp|P30561.3|AHR_MOUSE RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526621|gb|AAL89725.1|AF405560_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526623|gb|AAL89726.1|AF405561_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526625|gb|AAL89727.1|AF405562_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526633|gb|AAL89731.1|AF405566_1 aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|1040873|gb|AAA92082.1| aromatic hydrocarbon receptor, partial [Homo sapiens]
Length = 232
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPH--NL 56
+LP P + ++LDK S++RL++SYL+ + F P R+G + NL
Sbjct: 49 LLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNL 108
Query: 57 QEGQ 60
QEG+
Sbjct: 109 QEGE 112
>gi|34921326|sp|Q8R4S7.1|AHR_MUSCR RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526629|gb|AAL89729.1|AF405564_1 aryl-hydrocarbon receptor [Mus caroli]
Length = 854
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|395536558|ref|XP_003770281.1| PREDICTED: uncharacterized protein LOC100916736 [Sarcophilus
harrisii]
Length = 957
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD-FSGHG 34
+LP P + ++LDK SI+RL + YLK++ F+G G
Sbjct: 46 LLPFPEDVRARLDKLSILRLAVGYLKVKGYFTGAG 80
>gi|3561052|gb|AAC35168.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933879|emb|CAP16657.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 810
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|633821|gb|AAB30431.1| aromatic hydrocarbon receptor, AhR=Ahrd allele product [mice,
DBA/2, D2, Peptide, 848 aa]
Length = 848
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|34921317|sp|Q8R4S2.1|AHR_MUSSP RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526643|gb|AAL89736.1|AF405571_1 aryl-hydrocarbon receptor [Mus spretus]
Length = 854
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|1094268|prf||2105366A aryl hydrocarbon receptor
Length = 805
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|34921322|sp|Q8R4S5.1|AHR_MUSMM RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526637|gb|AAL89733.1|AF405568_1 aryl-hydrocarbon receptor [Mus musculus molossinus]
Length = 883
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|51870521|emb|CAH25391.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 844
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 43 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 72
>gi|7304873|ref|NP_038492.1| aryl hydrocarbon receptor [Mus musculus]
gi|19526627|gb|AAL89728.1|AF405563_1 aryl-hydrocarbon receptor [Mus musculus]
gi|1215804|dbj|BAA07469.1| arylhydrocarbon receptor [Mus musculus]
gi|74148892|dbj|BAE32140.1| unnamed protein product [Mus musculus]
gi|157169880|gb|AAI52974.1| Aryl-hydrocarbon receptor [synthetic construct]
gi|162317858|gb|AAI56630.1| Aryl-hydrocarbon receptor [synthetic construct]
Length = 805
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|148781864|dbj|BAF64245.1| aryl hydrocarbon receptor 2 [Phalacrocorax carbo]
Length = 995
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK SI+RL + YLK++ +
Sbjct: 45 LLPFPEDVCARLDKLSILRLAVGYLKVKSY 74
>gi|148704916|gb|EDL36863.1| aryl-hydrocarbon receptor [Mus musculus]
Length = 917
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 121 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 150
>gi|34921324|sp|Q8R4S6.1|AHR_MUSMC RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526631|gb|AAL89730.1|AF405565_1 aryl-hydrocarbon receptor [Mus musculus castaneus]
Length = 848
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|19526635|gb|AAL89732.1|AF405567_1 aryl-hydrocarbon receptor [Mus musculus]
gi|13160985|gb|AAK13443.1| aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|34921320|sp|Q8R4S4.1|AHR_MUSSI RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526639|gb|AAL89734.1|AF405569_1 aryl-hydrocarbon receptor [Mus spicilegus]
Length = 854
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|765299|gb|AAB32339.1| arylhydrocarbon receptor, AhR=dioxin-activated transcriptional
factor [mice, DBA/2J, liver, Peptide, 848 aa]
Length = 848
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|355667647|gb|AER93935.1| aryl hydrocarbon receptor [Mustela putorius furo]
Length = 683
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|304561304|gb|ADM43598.1| AHR1 [Trachemys scripta]
Length = 348
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|389615077|dbj|BAM20533.1| hypoxia-inducible factor, partial [Papilio polytes]
Length = 211
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF-----SGHGDPP 37
LP QLDKAS++RL ISYL++RD G+ +PP
Sbjct: 47 LPAKKEEVEQLDKASVMRLAISYLRVRDVVSMLPEGNTEPP 87
>gi|19526641|gb|AAL89735.1|AF405570_1 aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|68299588|dbj|BAE02824.1| aryl hydrocarbon receptor 1 [Pagrus major]
Length = 846
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S LDK SI+RL++S+L+ + F
Sbjct: 45 LLPFPEDVISSLDKLSILRLSVSFLRTKSF 74
>gi|345326320|ref|XP_001512322.2| PREDICTED: single-minded homolog 2-like [Ornithorhynchus anatinus]
Length = 849
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 10 SQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHNLQ 57
+QLDKASIIRLT SYLK+R G GD W SR GP S + + H LQ
Sbjct: 99 AQLDKASIIRLTTSYLKMRAVFPEGLGD-AWGQPSRLGPLDSMAKELGSHLLQ 150
>gi|38520879|emb|CAE75590.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
Length = 365
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++R+++ YLK++ F
Sbjct: 51 LLPFPEDVRSRLDKLSVLRISVGYLKVKSF 80
>gi|443732750|gb|ELU17358.1| hypothetical protein CAPTEDRAFT_72408, partial [Capitella teleta]
Length = 370
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSG 32
LP+ + +QLDKASI+R+ IS+L+LR G
Sbjct: 31 LPVAPSTLAQLDKASIMRVAISHLRLRKLFG 61
>gi|21717335|gb|AAC59696.3| aryl hydrocarbon receptor 2 [Fundulus heteroclitus]
Length = 951
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++ YL+++ +
Sbjct: 52 LLPFPDEIRSRLDKLSVLRLSVGYLRVKSY 81
>gi|355526055|gb|AET05824.1| hypoxia-inducible factor 3 alpha, partial [Gadus morhua]
Length = 109
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP +++ LDKA+I+R+T+S+L++
Sbjct: 28 LPLPHKVSAHLDKAAIMRVTLSFLRM 53
>gi|50347107|gb|AAT75229.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|357616292|gb|EHJ70114.1| putative hypoxia-inducible factor 1 alpha [Danaus plexippus]
Length = 794
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF 30
LP QLDKASI+RL ISYL++RD
Sbjct: 11 LPAKKEDVEQLDKASIMRLAISYLRVRDV 39
>gi|50347109|gb|AAT75230.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|50347103|gb|AAT75227.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|50347111|gb|AAT75231.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|195395058|ref|XP_002056153.1| GJ10784 [Drosophila virilis]
gi|194142862|gb|EDW59265.1| GJ10784 [Drosophila virilis]
Length = 323
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPL +QLDKAS++R+TI+YLK+R
Sbjct: 39 LPLKPDDVNQLDKASVMRITIAYLKIR 65
>gi|157114229|ref|XP_001657997.1| hypoxia-inducible factor [Aedes aegypti]
gi|108883603|gb|EAT47828.1| AAEL001097-PA [Aedes aegypti]
Length = 357
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD 29
+LP+ LDKAS++RL+I+YLK+RD
Sbjct: 37 LLPMRQEDVDHLDKASVMRLSIAYLKVRD 65
>gi|432936018|ref|XP_004082080.1| PREDICTED: aryl hydrocarbon receptor-like, partial [Oryzias
latipes]
Length = 632
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + S+LDK S++RL++ YL+++ +
Sbjct: 99 LLPFPEEVRSRLDKLSVLRLSVGYLRVKSY 128
>gi|313763044|gb|ADR80213.1| hypoxia-inducible factor 1 alpha [Labeo rohita]
Length = 194
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 19/20 (95%)
Query: 9 TSQLDKASIIRLTISYLKLR 28
TS LDKASI+RLTISYL++R
Sbjct: 1 TSHLDKASIMRLTISYLRMR 20
>gi|221460588|ref|NP_001138129.1| similar, isoform B [Drosophila melanogaster]
gi|220903258|gb|ACL83585.1| similar, isoform B [Drosophila melanogaster]
Length = 426
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRD 29
LPL +QLDKAS++R+TI++LK+R+
Sbjct: 99 LPLKTDDVNQLDKASVMRITIAFLKIRE 126
>gi|50347105|gb|AAT75228.1| truncated aryl hydrocarbon receptor [Mus musculus]
Length = 114
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 81
>gi|449270999|gb|EMC81635.1| Aryl hydrocarbon receptor, partial [Columba livia]
Length = 843
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 31 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 60
>gi|153957632|gb|ABS53347.1| aryl hydrocarbon receptor 2 [Cyprinodon variegatus]
Length = 229
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++ YL+++ +
Sbjct: 15 LLPFPDEIRSRLDKLSVLRLSVGYLRVKSY 44
>gi|312147016|dbj|BAJ33495.1| aryl hydrocarbon receptor [Falco peregrinus]
Length = 862
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|392340999|ref|XP_003754219.1| PREDICTED: neuronal PAS domain-containing protein 3 [Rattus
norvegicus]
Length = 816
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 27 LRDFSGHGDPPWS--RDGPSPSKSVKG 51
+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 1 MRDFANQGDPPWNLRMEGPPPNTSVKG 27
>gi|345489461|ref|XP_001605010.2| PREDICTED: hypothetical protein LOC100121394 [Nasonia
vitripennis]
Length = 989
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LP+P + LDKAS++RL I+YLK R
Sbjct: 42 LPVPPCEAAHLDKASVMRLAIAYLKTR 68
>gi|321477475|gb|EFX88434.1| hypothetical protein DAPPUDRAFT_42139 [Daphnia pulex]
Length = 426
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP A+I S+LD+ SI+RL++SYL+ + +
Sbjct: 32 LLPYEASILSKLDRLSILRLSVSYLRTKSY 61
>gi|192101|gb|AAA02896.1| Ah-receptor [Mus musculus]
Length = 805
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL+++YL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVTYLRAKSF 81
>gi|297189741|gb|ADI24457.1| aryl hydrocarbon receptor 1 [Phasianus colchicus]
Length = 860
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|145207984|ref|NP_037281.2| aryl hydrocarbon receptor precursor [Rattus norvegicus]
gi|510269|gb|AAA56897.1| Ah receptor [Rattus norvegicus]
Length = 853
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL+++YL+ + F
Sbjct: 52 LLPFPQDVINKLDKLSVLRLSVTYLRAKSF 81
>gi|34850157|dbj|BAC87795.1| Aryl Hydrocarbon Receptor 1 [Phoebastria nigripes]
Length = 861
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|348537940|ref|XP_003456450.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 677
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP +++ LDKA+I+R+T+S+L++
Sbjct: 44 LPLPRRVSTHLDKAAIMRVTLSFLRM 69
>gi|30172458|gb|AAO17044.1| neuronal PAS3 transcript variant 2 [Homo sapiens]
Length = 153
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 27 LRDFSGHGDPPWS--RDGPSPSKSVKG 51
+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 1 MRDFANQGDPPWNLRMEGPPPNTSVKG 27
>gi|82408364|gb|AAF15281.2|AF192503_1 aryl hydrocarbon receptor [Sterna hirundo]
Length = 859
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|157112802|ref|XP_001657624.1| hypoxia-inducible factor [Aedes aegypti]
gi|108868294|gb|EAT32521.1| AAEL015383-PA [Aedes aegypti]
Length = 317
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRD 29
+LP+ LDKAS++RL+I+YLK+RD
Sbjct: 36 LLPMRQEDVDHLDKASVMRLSIAYLKVRD 64
>gi|403180740|gb|AFR24092.1| aryl hydrocarbon receptor 1 [Squalus acanthias]
Length = 922
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP +TS LDK SI+RL+++YL+ + F
Sbjct: 45 LLPFAEDVTSSLDKLSILRLSVTYLRSKTF 74
>gi|45383874|ref|NP_989449.1| aryl hydrocarbon receptor [Gallus gallus]
gi|19343352|gb|AAF15280.2|AF192502_1 aryl hydrocarbon receptor [Gallus gallus]
Length = 858
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|328943218|gb|ADI24458.2| aryl hydrocarbon receptor 1*2 [Coturnix japonica]
Length = 859
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|328943216|gb|ADI24459.2| aryl hydrocarbon receptor 1*1 [Coturnix japonica]
Length = 857
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 50 LLPFPQDVIAKLDKLSVLRLSVSYLRAKSF 79
>gi|296209529|ref|XP_002751575.1| PREDICTED: aryl hydrocarbon receptor [Callithrix jacchus]
Length = 850
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL++SYL+ + F
Sbjct: 53 LLPFPQDVINKLDKLSVLRLSVSYLRAKSF 82
>gi|410969839|ref|XP_003991399.1| PREDICTED: aryl hydrocarbon receptor-like [Felis catus]
Length = 649
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 10/49 (20%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSG----------HGDPPWS 39
+LP P + ++LDK SI+RL + YLK++ + GDPP +
Sbjct: 39 LLPFPEDVRARLDKLSILRLIVGYLKVKSYFAAILKDSIADCSGDPPMN 87
>gi|301775376|ref|XP_002923099.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Ailuropoda
melanoleuca]
Length = 670
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LP +++ LDKASI+RLTISYL+
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLR 65
>gi|239924050|gb|ACS34985.1| AHR2 protein [Chrysemys picta]
Length = 1035
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++ +
Sbjct: 51 LLPFPEDVQARLDKLSVLRLIVGYLKVKSY 80
>gi|348508776|ref|XP_003441929.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Oreochromis niloticus]
Length = 361
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKL 27
+LPL ++ + LDK S+IRLT+SY+++
Sbjct: 33 LLPLQPSVRAHLDKPSVIRLTLSYIRM 59
>gi|83817021|ref|NP_001033052.1| aryl hydrocarbon receptor 2B [Takifugu rubripes]
gi|68349477|gb|AAY96632.1| aryl hydrocarbon receptor 2B [Takifugu rubripes]
Length = 981
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP + S+LDK S++RL++ YLK++ F
Sbjct: 51 LLPFTEDVRSRLDKLSVLRLSVGYLKVKSF 80
>gi|281353701|gb|EFB29285.1| hypothetical protein PANDA_012188 [Ailuropoda melanoleuca]
Length = 603
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LP +++ LDKASI+RLTISYL+
Sbjct: 33 LPFARGVSAHLDKASIMRLTISYLR 57
>gi|185133926|ref|NP_001117037.1| aryl hydrocarbon receptor 2 gamma [Salmo salar]
gi|27657682|gb|AAL12247.1| aryl hydrocarbon receptor 2 gamma [Salmo salar]
Length = 1106
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSG----HGDPPW 38
+LP + ++LDK S++RL++ YLK++ F G P W
Sbjct: 51 LLPFSEDVRARLDKLSVLRLSVGYLKVKSFFNATMKKGSPGW 92
>gi|359062827|ref|XP_002685208.2| PREDICTED: aryl hydrocarbon receptor [Bos taurus]
Length = 693
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++ +
Sbjct: 63 LLPFPEDVRARLDKLSVLRLIVGYLKVKSY 92
>gi|358410766|ref|XP_601023.5| PREDICTED: uncharacterized protein LOC522736, partial [Bos taurus]
Length = 847
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++ +
Sbjct: 217 LLPFPEDVRARLDKLSVLRLIVGYLKVKSY 246
>gi|296490864|tpg|DAA32977.1| TPA: AHR2 protein-like [Bos taurus]
Length = 799
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++ +
Sbjct: 63 LLPFPEDVRARLDKLSVLRLIVGYLKVKSY 92
>gi|355755960|gb|EHH59707.1| hypothetical protein EGM_09889, partial [Macaca fascicularis]
Length = 665
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDG 42
LP +++ LDKASI+RLTISYL G+ W++ G
Sbjct: 41 LPFARGVSAHLDKASIMRLTISYLXXXXXXAPGE--WNQVG 79
>gi|213511440|ref|NP_001133494.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
gi|209154226|gb|ACI33345.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 628
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP +++ LDKA+I+R+T+S+L++
Sbjct: 43 LPLPRRVSADLDKAAIMRVTLSFLRM 68
>gi|185133172|ref|NP_001117015.1| aryl hydrocarbon receptor 2 delta [Salmo salar]
gi|27544855|gb|AAO18424.1| aryl hydrocarbon receptor 2 delta [Salmo salar]
Length = 1107
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSG----HGDPPW 38
+LP + ++LDK S++RL++ YLK++ F G P W
Sbjct: 51 LLPFSEDVRARLDKLSVLRLSVGYLKVKSFFSATMKKGSPGW 92
>gi|440900488|gb|ELR51615.1| Aryl hydrocarbon receptor [Bos grunniens mutus]
Length = 705
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P + ++LDK S++RL + YLK++ +
Sbjct: 56 LLPFPEDVRARLDKLSVLRLIVGYLKVKSY 85
>gi|407316788|gb|AFU07576.1| hypoxia-inducible factor 3 alpha subunit [Schizothorax prenanti]
Length = 628
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKL 27
LPLP I S LDKA+I+R+ +SYL++
Sbjct: 38 LPLPRRIASHLDKAAIMRVALSYLRM 63
>gi|190339004|gb|AAI63123.1| Aryl-hydrocarbon receptor repressor b [Danio rerio]
Length = 573
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP A + ++LDK S++RL++S+L+++ F
Sbjct: 50 LLPFSAEVITKLDKLSVLRLSVSFLRVKSF 79
>gi|410927715|ref|XP_003977286.1| PREDICTED: aryl hydrocarbon receptor-like, partial [Takifugu
rubripes]
Length = 82
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP + S+LDK S++RL++ YLK++ F
Sbjct: 51 LLPFTEDVRSRLDKLSVLRLSVGYLKVKSF 80
>gi|391327945|ref|XP_003738455.1| PREDICTED: aryl hydrocarbon receptor-like [Metaseiulus
occidentalis]
Length = 685
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP ++ S+LDK SI+RL++SYL+ + +
Sbjct: 86 LLPFDQSVLSKLDKLSILRLSVSYLRTKSY 115
>gi|76573874|ref|NP_001029092.1| aryl-hydrocarbon receptor repressor b [Danio rerio]
gi|62739073|gb|AAX98237.1| aryl hydrocarbon receptor repressor 2 [Danio rerio]
Length = 573
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP A + ++LDK S++RL++S+L+++ F
Sbjct: 50 LLPFSAEVITKLDKLSVLRLSVSFLRVKSF 79
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,069,866,899
Number of Sequences: 23463169
Number of extensions: 36038339
Number of successful extensions: 48234
Number of sequences better than 100.0: 876
Number of HSP's better than 100.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 47350
Number of HSP's gapped (non-prelim): 887
length of query: 62
length of database: 8,064,228,071
effective HSP length: 34
effective length of query: 28
effective length of database: 7,266,480,325
effective search space: 203461449100
effective search space used: 203461449100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)