Your job contains 1 sequence.
>psy17810
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSVKGIPHNLQEGQ
DS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17810
(62 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262139 - symbol:trh "trachealess" species:7227 "D... 217 1.6e-16 1
UNIPROTKB|I3LMD4 - symbol:NPAS3 "Uncharacterized protein"... 200 4.7e-16 1
UNIPROTKB|F1NJ70 - symbol:F1NJ70 "Uncharacterized protein... 199 6.0e-16 1
MGI|MGI:1351610 - symbol:Npas3 "neuronal PAS domain prote... 205 2.7e-15 1
UNIPROTKB|F8VR32 - symbol:NPAS3 "Neuronal PAS domain-cont... 205 2.8e-15 1
UNIPROTKB|F8VS42 - symbol:NPAS3 "Neuronal PAS domain-cont... 200 9.0e-15 1
UNIPROTKB|F6VP83 - symbol:NPAS3 "Uncharacterized protein"... 200 9.1e-15 1
UNIPROTKB|F7HC48 - symbol:NPAS3 "Uncharacterized protein"... 200 9.4e-15 1
UNIPROTKB|Q8IXF0 - symbol:NPAS3 "Neuronal PAS domain-cont... 200 9.4e-15 1
ZFIN|ZDB-GENE-060503-934 - symbol:npas3b "neuronal PAS do... 174 4.3e-12 1
UNIPROTKB|H0YHB6 - symbol:NPAS3 "Neuronal PAS domain-cont... 135 3.6e-09 1
UNIPROTKB|F1RM06 - symbol:NPAS1 "Uncharacterized protein"... 142 8.0e-09 1
UNIPROTKB|E1B815 - symbol:NPAS1 "Uncharacterized protein"... 141 1.0e-08 1
UNIPROTKB|Q99742 - symbol:NPAS1 "Neuronal PAS domain-cont... 141 1.0e-08 1
UNIPROTKB|J9P6G5 - symbol:NPAS1 "Uncharacterized protein"... 141 1.0e-08 1
MGI|MGI:109205 - symbol:Npas1 "neuronal PAS domain protei... 140 1.3e-08 1
RGD|1310040 - symbol:Npas1 "neuronal PAS domain protein 1... 140 1.3e-08 1
RGD|1308016 - symbol:Sim2 "single-minded homolog 2 (Droso... 132 1.1e-07 1
MGI|MGI:98307 - symbol:Sim2 "single-minded homolog 2 (Dro... 132 1.1e-07 1
UNIPROTKB|E1BSJ1 - symbol:SIM2 "Uncharacterized protein" ... 127 1.9e-07 1
UNIPROTKB|F1NTI6 - symbol:SIM1 "Uncharacterized protein" ... 118 2.3e-07 1
UNIPROTKB|Q14190 - symbol:SIM2 "Single-minded homolog 2" ... 128 3.0e-07 1
UNIPROTKB|E2RDR2 - symbol:SIM2 "Uncharacterized protein" ... 127 3.0e-07 1
ZFIN|ZDB-GENE-010803-1 - symbol:sim2 "single-minded homol... 118 3.9e-07 2
FB|FBgn0004666 - symbol:sim "single-minded" species:7227 ... 124 8.5e-07 1
ZFIN|ZDB-GENE-041210-5 - symbol:sim1b "single-minded homo... 123 8.6e-07 1
MGI|MGI:98306 - symbol:Sim1 "single-minded homolog 1 (Dro... 118 4.2e-06 1
RGD|1309949 - symbol:Sim1 "single-minded homolog 1 (Droso... 118 4.2e-06 1
UNIPROTKB|E1C5G3 - symbol:SIM1 "Uncharacterized protein" ... 118 4.2e-06 1
UNIPROTKB|F1N178 - symbol:SIM1 "Uncharacterized protein" ... 118 4.2e-06 1
UNIPROTKB|E2QWV9 - symbol:SIM1 "Uncharacterized protein" ... 118 4.2e-06 1
UNIPROTKB|P81133 - symbol:SIM1 "Single-minded homolog 1" ... 118 4.2e-06 1
UNIPROTKB|F1RYR5 - symbol:SIM1 "Uncharacterized protein" ... 118 4.2e-06 1
ZFIN|ZDB-GENE-020829-1 - symbol:sim1a "single-minded homo... 112 1.8e-05 1
ZFIN|ZDB-GENE-030131-4490 - symbol:epas1a "endothelial PA... 94 2.9e-05 2
UNIPROTKB|Q4ZH58 - symbol:Q4ZH58 "Hypoxia-inducible facto... 100 4.4e-05 2
UNIPROTKB|Q0PGG7 - symbol:HIF1A "Hypoxia-inducible factor... 100 5.5e-05 2
UNIPROTKB|G3V143 - symbol:AHRR "Aryl hydrocarbon receptor... 90 0.00021 1
ZFIN|ZDB-GENE-040426-706 - symbol:hif1ab "hypoxia-inducib... 100 0.00036 1
UNIPROTKB|Q309Z6 - symbol:HIF1A "Hypoxia-inducible factor... 100 0.00038 1
UNIPROTKB|Q7YSE5 - symbol:Q7YSE5 "Hypoxia inducible facto... 100 0.00038 1
UNIPROTKB|A0JND0 - symbol:HIF1A "Hypoxia-inducible factor... 100 0.00038 1
UNIPROTKB|Q9XTA5 - symbol:HIF1A "Hypoxia-inducible factor... 100 0.00038 1
UNIPROTKB|F1PZ54 - symbol:HIF1A "Uncharacterized protein"... 100 0.00038 1
UNIPROTKB|Q52RL7 - symbol:Q52RL7 "Hypoxia inducible facto... 100 0.00038 1
UNIPROTKB|F1SRU5 - symbol:HIF1A "Uncharacterized protein"... 100 0.00039 1
UNIPROTKB|Q6H8T3 - symbol:hif-1a "Hypoxia inducible facto... 100 0.00039 1
RGD|61928 - symbol:Hif1a "hypoxia-inducible factor 1, alp... 100 0.00039 1
UNIPROTKB|O35800 - symbol:Hif1a "Hypoxia-inducible factor... 100 0.00039 1
UNIPROTKB|Q16665 - symbol:HIF1A "Hypoxia-inducible factor... 100 0.00039 1
UNIPROTKB|Q4R658 - symbol:Q4R658 "Testis cDNA, clone: Qts... 100 0.00039 1
UNIPROTKB|A8MYV6 - symbol:HIF1A "Hypoxia-inducible factor... 100 0.00039 1
UNIPROTKB|F1LT63 - symbol:Hif1a "Hypoxia-inducible factor... 100 0.00039 1
UNIPROTKB|D4A8P8 - symbol:Hif1a "Hypoxia-inducible factor... 100 0.00039 1
UNIPROTKB|A9YTQ3 - symbol:AHRR "Aryl hydrocarbon receptor... 87 0.00042 2
UNIPROTKB|E5RGQ2 - symbol:AHRR "Aryl hydrocarbon receptor... 87 0.00045 1
UNIPROTKB|E5RFG4 - symbol:AHRR "Aryl hydrocarbon receptor... 87 0.00052 1
UNIPROTKB|Q64F54 - symbol:Q64F54 "Hypoxia-inducible facto... 98 0.00063 1
ZFIN|ZDB-GENE-080917-55 - symbol:hif1aa "hypoxia-inducibl... 97 0.00073 1
UNIPROTKB|F1NJK2 - symbol:HIF1A "Hypoxia-inducible factor... 97 0.00079 1
UNIPROTKB|F1NQK5 - symbol:HIF1A "Hypoxia-inducible factor... 97 0.00079 1
UNIPROTKB|Q9YIB9 - symbol:HIF1A "Hypoxia-inducible factor... 97 0.00079 1
UNIPROTKB|F1S5K9 - symbol:EPAS1 "Uncharacterized protein"... 83 0.00085 2
>FB|FBgn0262139 [details] [associations]
symbol:trh "trachealess" species:7227 "Drosophila
melanogaster" [GO:0072175 "epithelial tube formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA;TAS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP;TAS] [GO:0007431 "salivary gland
development" evidence=NAS;IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0035277
"spiracle morphogenesis, open tracheal system" evidence=IMP]
[GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;TAS;IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0007425 "epithelial cell fate determination, open tracheal
system" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP;TAS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 EMBL:AE014296 GO:GO:0007435 GO:GO:0043565
GO:GO:0035277 GO:GO:0048813 GO:GO:0004871 GO:GO:0000981
GO:GO:0046982 SMART:SM00086 GO:GO:0046331 SUPFAM:SSF47459
GO:GO:0007425 GO:GO:0007443 eggNOG:NOG287666 KO:K09098
GO:GO:0072175 CTD:7200 EMBL:U33427 EMBL:U42699 EMBL:BT031114
EMBL:AY094911 RefSeq:NP_001036575.1 RefSeq:NP_001097461.2
RefSeq:NP_523872.2 UniGene:Dm.7330 ProteinModelPortal:Q24119
SMR:Q24119 STRING:Q24119 GeneID:38065 KEGG:dme:Dmel_CG42865
FlyBase:FBgn0262139 InParanoid:Q24119 OMA:PNASESH OrthoDB:EOG4JWSVB
GenomeRNAi:38065 NextBio:806807 Bgee:Q24119 GermOnline:CG6883
Uniprot:Q24119
Length = 1022
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSK 47
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW+R+ S SK
Sbjct: 112 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTREASSSSK 158
>UNIPROTKB|I3LMD4 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0007626 GO:GO:0035176
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042711 EMBL:AEMK01194093
EMBL:CT737373 EMBL:CT954268 EMBL:CU466420 EMBL:FP102544
Ensembl:ENSSSCT00000022418 GeneTree:ENSGT00700000104726 OMA:MGRASTA
Uniprot:I3LMD4
Length = 205
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 113 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 166
>UNIPROTKB|F1NJ70 [details] [associations]
symbol:F1NJ70 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104726 EMBL:AADN02003372 IPI:IPI00679423
Ensembl:ENSGALT00000032583 OMA:NTEFYEL Uniprot:F1NJ70
Length = 82
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVK 50
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK
Sbjct: 31 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVK 82
>MGI|MGI:1351610 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007610 "behavior" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042711 "maternal behavior" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1351610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0007626 GO:GO:0006351
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GO:GO:0042711 eggNOG:NOG287666 OrthoDB:EOG4M0F1J HOVERGEN:HBG052656
EMBL:AF173871 EMBL:AF168769 IPI:IPI00137835 UniGene:Mm.247044
UniGene:Mm.466545 ProteinModelPortal:Q9QZQ0 SMR:Q9QZQ0
STRING:Q9QZQ0 PhosphoSite:Q9QZQ0 PRIDE:Q9QZQ0 UCSC:uc007nno.1
HOGENOM:HOG000113836 InParanoid:Q9QZQ0 CleanEx:MM_NPAS3
Genevestigator:Q9QZQ0 GermOnline:ENSMUSG00000021010 Uniprot:Q9QZQ0
Length = 925
Score = 205 (77.2 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>UNIPROTKB|F8VR32 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021176 ProteinModelPortal:F8VR32 SMR:F8VR32
Ensembl:ENST00000551492 OMA:FENPKAA ArrayExpress:F8VR32 Bgee:F8VR32
Uniprot:F8VR32
Length = 938
Score = 205 (77.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKG 51
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVKG
Sbjct: 84 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKG 136
>UNIPROTKB|F8VS42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021732 ProteinModelPortal:F8VS42 SMR:F8VS42
Ensembl:ENST00000551634 ArrayExpress:F8VS42 Bgee:F8VS42
Uniprot:F8VS42
Length = 906
Score = 200 (75.5 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 54 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 107
>UNIPROTKB|F6VP83 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0042711 OMA:FENPKAA
Ensembl:ENSMMUT00000020820 Uniprot:F6VP83
Length = 913
Score = 200 (75.5 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 61 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 114
>UNIPROTKB|F7HC48 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:ACFV01030586
EMBL:ACFV01030587 EMBL:ACFV01030588 EMBL:ACFV01030589
EMBL:ACFV01030590 EMBL:ACFV01030591 EMBL:ACFV01030592
EMBL:ACFV01030593 EMBL:ACFV01030594 EMBL:ACFV01030595
EMBL:ACFV01030596 EMBL:ACFV01030597 EMBL:ACFV01030598
EMBL:ACFV01030599 EMBL:ACFV01030600 EMBL:ACFV01030601
EMBL:ACFV01030602 EMBL:ACFV01030603 EMBL:ACFV01030604
EMBL:ACFV01030605 EMBL:ACFV01030606 EMBL:ACFV01030607
EMBL:ACFV01030608 EMBL:ACFV01030609 EMBL:ACFV01030610
EMBL:ACFV01030611 EMBL:ACFV01030612 EMBL:ACFV01030613
Ensembl:ENSCJAT00000010549 Uniprot:F7HC48
Length = 932
Score = 200 (75.5 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 77 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 130
>UNIPROTKB|Q8IXF0 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459 GO:GO:0042711
eggNOG:NOG287666 KO:K09098 EMBL:AB055962 EMBL:AB054575
EMBL:AB054576 EMBL:AF164438 EMBL:AY157302 EMBL:AY157303
EMBL:AL079281 IPI:IPI00217513 IPI:IPI00394963 IPI:IPI00394964
IPI:IPI00394965 IPI:IPI00394966 IPI:IPI00394967
RefSeq:NP_001158221.1 RefSeq:NP_001159365.1 RefSeq:NP_071406.1
RefSeq:NP_775182.1 UniGene:Hs.657892 UniGene:Hs.675437
UniGene:Hs.675475 ProteinModelPortal:Q8IXF0 SMR:Q8IXF0
STRING:Q8IXF0 PhosphoSite:Q8IXF0 DMDM:38604888 PaxDb:Q8IXF0
PRIDE:Q8IXF0 DNASU:64067 Ensembl:ENST00000341321
Ensembl:ENST00000346562 Ensembl:ENST00000356141
Ensembl:ENST00000357798 Ensembl:ENST00000547068
Ensembl:ENST00000548645 GeneID:64067 KEGG:hsa:64067 UCSC:uc001wrs.3
UCSC:uc001wrt.3 UCSC:uc001wru.3 UCSC:uc001wrv.3 CTD:64067
GeneCards:GC14P033408 HGNC:HGNC:19311 HPA:HPA002892 MIM:609430
neXtProt:NX_Q8IXF0 PharmGKB:PA134968746 HOVERGEN:HBG052656
InParanoid:Q8IXF0 PhylomeDB:Q8IXF0 GenomeRNAi:64067 NextBio:65842
ArrayExpress:Q8IXF0 Bgee:Q8IXF0 CleanEx:HS_NPAS3
Genevestigator:Q8IXF0 GermOnline:ENSG00000151322 Uniprot:Q8IXF0
Length = 933
Score = 200 (75.5 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
+LPLPAAITSQLDKASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 77 LLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 130
>ZFIN|ZDB-GENE-060503-934 [details] [associations]
symbol:npas3b "neuronal PAS domain protein 3b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060503-934 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 EMBL:BX296539 IPI:IPI00612477
Ensembl:ENSDART00000101511 ArrayExpress:F1Q754 Bgee:F1Q754
Uniprot:F1Q754
Length = 770
Score = 174 (66.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 36/58 (62%), Positives = 42/58 (72%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGIPHNL 56
MLPLP AITSQLDKASIIRLTISYL +R F+ GDPPWS +G + V+ H+L
Sbjct: 62 MLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGENNCSKVRRTSHSL 119
>UNIPROTKB|H0YHB6 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 PROSITE:PS50112
SMART:SM00091 GO:GO:0004871 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 Ensembl:ENST00000546849 Bgee:H0YHB6
Uniprot:H0YHB6
Length = 125
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 15 ASIIRLTISYLKLRDFSGHGDPPWS--RDGPSPSKSVKGI 52
ASIIRLTISYLK+RDF+ GDPPW+ +GP P+ SVK I
Sbjct: 1 ASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVI 40
>UNIPROTKB|F1RM06 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
Length = 598
Score = 142 (55.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSPSKSV 49
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P S+
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRTAGPPASL 119
>UNIPROTKB|E1B815 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
Length = 587
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 64 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSSGP 108
>UNIPROTKB|Q99742 [details] [associations]
symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0007417 "central
nervous system development" evidence=TAS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
Length = 590
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGP 115
>UNIPROTKB|J9P6G5 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
Length = 594
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 72 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRATGP 116
>MGI|MGI:109205 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007610
"behavior" evidence=IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109205
GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 CTD:4861
eggNOG:NOG287666 HOGENOM:HOG000236298 HOVERGEN:HBG052655 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J EMBL:U77967 IPI:IPI00125487
RefSeq:NP_032744.1 UniGene:Mm.145821 ProteinModelPortal:P97459
SMR:P97459 STRING:P97459 PRIDE:P97459 Ensembl:ENSMUST00000002053
GeneID:18142 KEGG:mmu:18142 InParanoid:P97459 NextBio:293392
Bgee:P97459 CleanEx:MM_NPAS1 Genevestigator:P97459
GermOnline:ENSMUSG00000001988 Uniprot:P97459
Length = 594
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGP 115
>RGD|1310040 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:1310040 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:CH473979 CTD:4861
KO:K09098 OMA:VYPHLQR OrthoDB:EOG4M0F1J IPI:IPI00373182
RefSeq:NP_001100949.1 UniGene:Rn.211375 Ensembl:ENSRNOT00000020855
GeneID:308387 KEGG:rno:308387 UCSC:RGD:1310040 NextBio:658741
Uniprot:D3ZJ66
Length = 595
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPSP 45
+LPLP AI+SQLDKASI+RL+++YL+LR F+ G PPW P
Sbjct: 71 LLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGP 115
>RGD|1308016 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
Length = 656
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/62 (58%), Positives = 41/62 (66%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGDA-WGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>MGI|MGI:98307 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
Length = 657
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/62 (58%), Positives = 41/62 (66%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGDA-WGQPSRTGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>UNIPROTKB|E1BSJ1 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
"embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
Length = 419
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPW---SRDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W SR GP + + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGDA-WGQPSRIGPLDNVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>UNIPROTKB|F1NTI6 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
EMBL:AADN02002234 EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00585345 Ensembl:ENSGALT00000037235
Uniprot:F1NTI6
Length = 87
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|Q14190 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
Length = 667
Score = 128 (50.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPSKSVKGIPHNL 56
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W + PS + + G+ L
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGDA-WGQ--PSRAGPLDGVAKEL 80
>UNIPROTKB|E2RDR2 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
Length = 562
Score = 127 (49.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 35/62 (56%), Positives = 40/62 (64%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWS---RDGPSPSKSVKGIPHN 55
+LPLP+AITSQLDKASIIRLT SYLK+R G GD W R GP S + + H
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLGDA-WGQPCRAGPLDSVAKELGSHL 84
Query: 56 LQ 57
LQ
Sbjct: 85 LQ 86
>ZFIN|ZDB-GENE-010803-1 [details] [associations]
symbol:sim2 "single-minded homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
NextBio:20796935 Uniprot:Q8UVV3
Length = 585
Score = 118 (46.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
Score = 30 (15.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 32 GHGDPPWSRDGPSPSKSVKGIP 53
G P SRD P + + P
Sbjct: 435 GSSAPQTSRDAPWSCSAAENKP 456
>FB|FBgn0004666 [details] [associations]
symbol:sim "single-minded" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007398 "ectoderm development"
evidence=TAS] [GO:0007628 "adult walking behavior"
evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
[GO:0007420 "brain development" evidence=IMP] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007419 "ventral cord development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
Length = 697
Score = 124 (48.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 30/48 (62%), Positives = 35/48 (72%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDPPWSRDGPSPS 46
+LPLPAAITSQLDKAS+IRLT SYLK+R G G+ W G SP+
Sbjct: 50 LLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEA-W---GSSPA 93
>ZFIN|ZDB-GENE-041210-5 [details] [associations]
symbol:sim1b "single-minded homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
NextBio:20888303 Uniprot:C1JIE2
Length = 586
Score = 123 (48.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 36/64 (56%), Positives = 42/64 (65%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR-DF-SGHGDPPW-----SRDGPSPSKSVKGIP 53
MLPLP+AITSQLDKASIIRLT SYLK+R F G G+ W +R G +PS +
Sbjct: 26 MLPLPSAITSQLDKASIIRLTSSYLKMRLVFPQGLGEV-WGQAGRTRSGENPSHELGS-- 82
Query: 54 HNLQ 57
H LQ
Sbjct: 83 HLLQ 86
>MGI|MGI:98306 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
Uniprot:Q61045
Length = 765
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>RGD|1309949 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
Uniprot:D3ZMU8
Length = 765
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|E1C5G3 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
Length = 766
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|F1N178 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
Uniprot:F1N178
Length = 766
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|E2QWV9 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
Length = 766
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|P81133 [details] [associations]
symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
Length = 766
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>UNIPROTKB|F1RYR5 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
Length = 767
Score = 118 (46.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQLDKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQLDKASIIRLTTSYLKMR 53
>ZFIN|ZDB-GENE-020829-1 [details] [associations]
symbol:sim1a "single-minded homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0021979 "hypothalamus
cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
Uniprot:Q98SJ5
Length = 745
Score = 112 (44.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLR 28
+LPLP+AITSQ DKASIIRLT SYLK+R
Sbjct: 26 LLPLPSAITSQSDKASIIRLTTSYLKMR 53
>ZFIN|ZDB-GENE-030131-4490 [details] [associations]
symbol:epas1a "endothelial PAS domain protein 1a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-030131-4490 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CR931998 IPI:IPI00499388
Ensembl:ENSDART00000024415 ArrayExpress:E7FAJ1 Bgee:E7FAJ1
Uniprot:E7FAJ1
Length = 842
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDF--SGH 33
LPLP +I+S LDKASI+RL IS+L+ R SGH
Sbjct: 41 LPLPHSISSHLDKASIMRLAISFLRTRKLFSSGH 74
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 41 DGPSPSKSVKGIPHNLQE 58
D + S+SVKG P +L++
Sbjct: 752 DPQACSRSVKGCPEDLKQ 769
>UNIPROTKB|Q4ZH58 [details] [associations]
symbol:Q4ZH58 "Hypoxia-inducible factor 1 alpha"
species:64717 "Microtus oeconomus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:DQ010149 ProteinModelPortal:Q4ZH58
SMR:Q4ZH58 Uniprot:Q4ZH58
Length = 828
Score = 100 (40.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
Score = 32 (16.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 47 KSVKGIPHNLQEGQD 61
K VKG N Q G +
Sbjct: 755 KRVKGCKSNEQNGME 769
>UNIPROTKB|Q0PGG7 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:30521 "Bos grunniens" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ838046
EMBL:AY621118 ProteinModelPortal:Q0PGG7 SMR:Q0PGG7 Uniprot:Q0PGG7
Length = 823
Score = 100 (40.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
Score = 31 (16.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 37 PWSRDGP---SPSKSVKGI 52
P+S G SPS++ KG+
Sbjct: 655 PYSDTGSRTASPSRAGKGV 673
>UNIPROTKB|G3V143 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC010442 EMBL:AC118458 EMBL:CH471235 HGNC:HGNC:346
ProteinModelPortal:G3V143 SMR:G3V143 Ensembl:ENST00000515206
ArrayExpress:G3V143 Bgee:G3V143 Uniprot:G3V143
Length = 139
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF-SGHG 34
+LP P I S+LDK S++RL++SYL+++ F G G
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQGQG 84
>ZFIN|ZDB-GENE-040426-706 [details] [associations]
symbol:hif1ab "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-706 GO:GO:0005634 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OrthoDB:EOG40CHGP OMA:QNAQRKR
EMBL:BX255914 EMBL:AY326951 IPI:IPI00491851 UniGene:Dr.75612
SMR:Q6EHI4 STRING:Q6EHI4 Ensembl:ENSDART00000018500
InParanoid:Q6EHI4 Uniprot:Q6EHI4
Length = 777
Score = 100 (40.3 bits), Expect = 0.00036, P = 0.00036
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP +TS LDKASI+RLTISYL++R
Sbjct: 43 LPLPHNVTSHLDKASIMRLTISYLRMR 69
>UNIPROTKB|Q309Z6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:146132 "Eospalax baileyi" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ229099
ProteinModelPortal:Q309Z6 SMR:Q309Z6 Uniprot:Q309Z6
Length = 819
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>UNIPROTKB|Q7YSE5 [details] [associations]
symbol:Q7YSE5 "Hypoxia inducible factor 1 alpha subunit"
species:9986 "Oryctolagus cuniculus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
OrthoDB:EOG40CHGP CTD:3091 EMBL:AY273790 RefSeq:NP_001076251.1
UniGene:Ocu.3329 HSSP:Q16665 ProteinModelPortal:Q7YSE5 SMR:Q7YSE5
STRING:Q7YSE5 GeneID:100009579 Uniprot:Q7YSE5
Length = 819
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|A0JND0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0061419
"positive regulation of transcription from RNA polymerase II
promoter in response to hypoxia" evidence=IEA] [GO:0061298 "retina
vasculature development in camera-type eye" evidence=IEA]
[GO:0061030 "epithelial cell differentiation involved in mammary
gland alveolus development" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0051541 "elastin metabolic
process" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
UniGene:Bt.4184 CTD:3091 KO:K08268 OMA:QNAQRKR GO:GO:0001922
GO:GO:0032963 GO:GO:0002248 GO:GO:0051541 GO:GO:0060574
GO:GO:2001054 GO:GO:0021502 GO:GO:0032909 GO:GO:0010573
EMBL:DAAA02029320 EMBL:BC126622 IPI:IPI00825226 RefSeq:NP_776764.2
SMR:A0JND0 STRING:A0JND0 Ensembl:ENSBTAT00000027885 GeneID:281814
KEGG:bta:281814 InParanoid:A0JND0 NextBio:20805726 Uniprot:A0JND0
Length = 823
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|Q9XTA5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:0019896 "axon transport of
mitochondrion" evidence=ISS] [GO:0071456 "cellular response to
hypoxia" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0071456 GO:GO:0003700 GO:GO:0006351
GO:GO:0044212 GO:GO:0004871 GO:GO:0019896 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:AB018398
IPI:IPI00689122 UniGene:Bt.4184 ProteinModelPortal:Q9XTA5
SMR:Q9XTA5 STRING:Q9XTA5 PRIDE:Q9XTA5 InParanoid:Q9XTA5
OrthoDB:EOG40CHGP Uniprot:Q9XTA5
Length = 823
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|F1PZ54 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 CTD:3091 KO:K08268
OMA:QNAQRKR EMBL:AAEX03005770 RefSeq:XP_003639249.1
Ensembl:ENSCAFT00000024897 GeneID:480348 KEGG:cfa:480348
Uniprot:F1PZ54
Length = 823
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|Q52RL7 [details] [associations]
symbol:Q52RL7 "Hypoxia inducible factor-1 alpha"
species:59538 "Pantholops hodgsonii" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY971808 ProteinModelPortal:Q52RL7
SMR:Q52RL7 Uniprot:Q52RL7
Length = 823
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|F1SRU5 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001054 "negative regulation of mesenchymal cell
apoptotic process" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:0061298 "retina vasculature development
in camera-type eye" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 GO:GO:0061030
GO:GO:0003208 OMA:QNAQRKR GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 EMBL:FP236550
Ensembl:ENSSSCT00000005618 ArrayExpress:F1SRU5 Uniprot:F1SRU5
Length = 824
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|Q6H8T3 [details] [associations]
symbol:hif-1a "Hypoxia inducible factor 1 alpha"
species:134510 "Nannospalax judaei" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ715791 ProteinModelPortal:Q6H8T3
SMR:Q6H8T3 Uniprot:Q6H8T3
Length = 824
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>RGD|61928 [details] [associations]
symbol:Hif1a "hypoxia-inducible factor 1, alpha subunit (basic
helix-loop-helix transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001568 "blood
vessel development" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS;IDA] [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0001892 "embryonic placenta development"
evidence=IEA;ISO] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA;ISO] [GO:0001944 "vasculature development"
evidence=ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0002248 "connective tissue replacement
involved in inflammatory response wound healing" evidence=IEA;ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003690 "double-stranded
DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS;IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006089 "lactate
metabolic process" evidence=IEA;ISO] [GO:0006110 "regulation of
glycolysis" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;TAS] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007595 "lactation"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008542 "visual learning"
evidence=IEA;ISO] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA;ISO] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA;ISO]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA;ISO] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA;ISO] [GO:0014850 "response to
muscle activity" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IEA;ISO]
[GO:0021502 "neural fold elevation formation" evidence=IEA;ISO]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA;ISO]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA;ISO] [GO:0031514
"motile cilium" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032007 "negative regulation of TOR
signaling cascade" evidence=IEA;ISO] [GO:0032364 "oxygen
homeostasis" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0032909 "regulation of transforming growth factor
beta2 production" evidence=IEA;ISO] [GO:0032963 "collagen metabolic
process" evidence=IEA;ISO] [GO:0034244 "negative regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO;ISS] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA;ISO] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042541 "hemoglobin biosynthetic process"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA;ISO;IMP] [GO:0043627 "response to
estrogen stimulus" evidence=IEP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO;ISS] [GO:0045648
"positive regulation of erythrocyte differentiation"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045906 "negative regulation of
vasoconstriction" evidence=IMP] [GO:0045926 "negative regulation of
growth" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP]
[GO:0046716 "muscle cell homeostasis" evidence=IEA;ISO] [GO:0046886
"positive regulation of hormone biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;ISS;IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis" evidence=ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IMP] [GO:0050790 "regulation of catalytic
activity" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0051541 "elastin metabolic process"
evidence=IEA;ISO] [GO:0051879 "Hsp90 protein binding"
evidence=IEA;ISO] [GO:0060135 "maternal process involved in female
pregnancy" evidence=IEP] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IEA;ISO] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA;ISO] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA;ISO] [GO:0061419 "positive regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA;ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEP] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA;ISO] [GO:0071407 "cellular response to
organic cyclic compound" evidence=IEP] [GO:0071456 "cellular
response to hypoxia" evidence=ISO;ISS] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA;ISO] [GO:2001054 "negative
regulation of mesenchymal cell apoptotic process" evidence=IEA;ISO]
[GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:61928 GO:GO:0005634 GO:GO:0005737
GO:GO:0043066 GO:GO:0009612 GO:GO:0032869 GO:GO:0060135
GO:GO:0009749 GO:GO:0048661 GO:GO:0045944 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0044212
GO:GO:0043065 GO:GO:0004871 GO:GO:0003690 GO:GO:0019896
GO:GO:0046982 GO:GO:0043627 GO:GO:0045906 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407 GO:GO:0035035
GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|O35800 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005634
GO:GO:0005737 GO:GO:0043066 GO:GO:0009612 GO:GO:0032869
GO:GO:0060135 GO:GO:0009749 GO:GO:0048661 GO:GO:0045944
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 GO:GO:0071222
GO:GO:0044212 GO:GO:0043065 GO:GO:0004871 GO:GO:0003690
GO:GO:0019896 GO:GO:0046982 GO:GO:0043627 GO:GO:0045906
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407
GO:GO:0035035 GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|Q16665 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003151
"outflow tract morphogenesis" evidence=IEA] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=IEA] [GO:0006089 "lactate
metabolic process" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0014850 "response
to muscle activity" evidence=IEA] [GO:0021502 "neural fold
elevation formation" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0032007 "negative regulation of
TOR signaling cascade" evidence=IEA] [GO:0035162 "embryonic
hemopoiesis" evidence=IEA] [GO:0035774 "positive regulation of
insulin secretion involved in cellular response to glucose
stimulus" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0061030
"epithelial cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:2001054
"negative regulation of mesenchymal cell apoptotic process"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=TAS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;TAS]
[GO:0035035 "histone acetyltransferase binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0071456 "cellular response to
hypoxia" evidence=IEP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0019896 "axon transport of
mitochondrion" evidence=IMP] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0032364 "oxygen
homeostasis" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=TAS]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IMP] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=TAS] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=TAS] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IC] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045766 "positive regulation of angiogenesis" evidence=IC]
[GO:0045821 "positive regulation of glycolysis" evidence=IC]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISS] [GO:0002248 "connective
tissue replacement involved in inflammatory response wound healing"
evidence=ISS] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=ISS] [GO:0032963 "collagen metabolic process"
evidence=ISS] [GO:0051541 "elastin metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070101 "positive
regulation of chemokine-mediated signaling pathway" evidence=IC]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0071347 "cellular response to interleukin-1"
evidence=IEP] [GO:0010573 "vascular endothelial growth factor
production" evidence=IDA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IDA;IMP] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0032869 GO:GO:0003677 GO:GO:0001755
GO:GO:0001938 GO:GO:0051000 GO:GO:0071542
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0043565
GO:GO:0048661 GO:GO:0008542 GO:GO:0007219 GO:GO:0043524
GO:GO:0032722 GO:GO:0010575 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 GO:GO:0045766 GO:GO:0042593 GO:GO:0032007
GO:GO:0045821 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 Pathway_Interaction_DB:pdgfrbpathway
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0051879 GO:GO:0014850
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:vegfr1_pathway GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 PDB:1D7G
PDB:4H6J PDBsum:1D7G PDBsum:4H6J
Pathway_Interaction_DB:hif1apathway GO:GO:0001892 GO:GO:0042789
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 PDB:1L8C PDBsum:1L8C
GO:GO:0000988 GO:GO:0006089 GO:GO:0010870 GO:GO:0070101 PDB:3HQR
PDB:3HQU PDBsum:3HQR PDBsum:3HQU GO:GO:0032364 PDB:1LM8 PDB:1LQB
PDB:4AJY PDBsum:1LM8 PDBsum:1LQB PDBsum:4AJY PDB:1L3E PDBsum:1L3E
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 OrthoDB:EOG40CHGP CTD:3091 KO:K08268
EMBL:U22431 EMBL:U29165 EMBL:AF050127 EMBL:AF050115 EMBL:AF050116
EMBL:AF050117 EMBL:AF050118 EMBL:AF050119 EMBL:AF050120
EMBL:AF050121 EMBL:AF050122 EMBL:AF050123 EMBL:AF050124
EMBL:AF050125 EMBL:AF050126 EMBL:FJ790247 EMBL:AF207601
EMBL:AF207602 EMBL:AF208487 EMBL:AF304431 EMBL:AB073325
EMBL:BT009776 EMBL:AL137129 EMBL:BC012527 IPI:IPI00003442
IPI:IPI00332963 IPI:IPI00788876 PIR:I38972 RefSeq:NP_001230013.1
RefSeq:NP_001521.1 RefSeq:NP_851397.1 UniGene:Hs.597216
UniGene:Hs.719495 PDB:1H2K PDB:1H2L PDB:1H2M PDB:2ILM PDBsum:1H2K
PDBsum:1H2L PDBsum:1H2M PDBsum:2ILM DisProt:DP00262
ProteinModelPortal:Q16665 SMR:Q16665 DIP:DIP-29722N IntAct:Q16665
MINT:MINT-133270 STRING:Q16665 PhosphoSite:Q16665 DMDM:2498017
PaxDb:Q16665 PRIDE:Q16665 DNASU:3091 Ensembl:ENST00000323441
Ensembl:ENST00000337138 Ensembl:ENST00000539097 GeneID:3091
KEGG:hsa:3091 UCSC:uc001xfq.2 GeneCards:GC14P062162 HGNC:HGNC:4910
HPA:CAB017442 HPA:HPA001275 MIM:603348 neXtProt:NX_Q16665
PharmGKB:PA29283 OMA:QNAQRKR PhylomeDB:Q16665 BindingDB:Q16665
ChEMBL:CHEMBL4261 ChiTaRS:HIF1A EvolutionaryTrace:Q16665
GenomeRNAi:3091 NextBio:12265 ArrayExpress:Q16665 Bgee:Q16665
CleanEx:HS_HIF1A Genevestigator:Q16665 GermOnline:ENSG00000100644
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0061419
GO:GO:0032909 GO:GO:0010573 Uniprot:Q16665
Length = 826
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|Q4R658 [details] [associations]
symbol:Q4R658 "Testis cDNA, clone: QtsA-19088, similar to
human hypoxia-inducible factor 1, alpha subunit
(basichelix-loop-helix transcription factor) (HIF1A),transcript
variant 1," species:9541 "Macaca fascicularis" [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0035035 "histone acetyltransferase binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
EMBL:AB169332 ProteinModelPortal:Q4R658 SMR:Q4R658 Uniprot:Q4R658
Length = 826
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 44 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 77
>UNIPROTKB|A8MYV6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1, alpha subunit
(Basic helix-loop-helix transcription factor), isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005730
EMBL:CH471061 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AL137129 IPI:IPI00788876
UniGene:Hs.597216 UniGene:Hs.719495 HGNC:HGNC:4910 ChiTaRS:HIF1A
SMR:A8MYV6 STRING:A8MYV6 Ensembl:ENST00000394997 UCSC:uc001xfs.2
Uniprot:A8MYV6
Length = 827
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>UNIPROTKB|F1LT63 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:61928 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
IPI:IPI00339106 Ensembl:ENSRNOT00000012105 ArrayExpress:F1LT63
Uniprot:F1LT63
Length = 827
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 33 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 66
>UNIPROTKB|D4A8P8 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0002248 "connective tissue replacement involved in inflammatory
response wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005737
GO:GO:0021987 GO:GO:0005730 GO:GO:0035774 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0043565 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0071347
GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 GO:GO:0001892
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 IPI:IPI00557648
Ensembl:ENSRNOT00000049725 ArrayExpress:D4A8P8 Uniprot:D4A8P8
Length = 828
Score = 100 (40.3 bits), Expect = 0.00039, P = 0.00039
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL++R GD
Sbjct: 45 LPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGD 78
>UNIPROTKB|A9YTQ3 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AF293639
EMBL:AF293629 EMBL:AF293630 EMBL:AF293631 EMBL:AF293632
EMBL:AF293633 EMBL:AF293634 EMBL:AF293635 EMBL:AF293636
EMBL:AF293637 EMBL:AF293638 EMBL:EU293605 EMBL:AB033060
EMBL:AC010442 EMBL:AC118458 EMBL:CH471235 EMBL:BC151852
EMBL:BC152406 IPI:IPI00718806 IPI:IPI00893051 IPI:IPI00893349
RefSeq:NP_001229341.1 RefSeq:NP_065782.2 UniGene:Hs.50823
ProteinModelPortal:A9YTQ3 SMR:A9YTQ3 STRING:A9YTQ3
PhosphoSite:A9YTQ3 PaxDb:A9YTQ3 PRIDE:A9YTQ3 DNASU:57491
Ensembl:ENST00000316418 Ensembl:ENST00000505113 GeneID:57491
KEGG:hsa:57491 UCSC:uc003jav.3 UCSC:uc003jaw.3 CTD:57491
GeneCards:GC05P000291 HGNC:HGNC:346 HPA:HPA019614 HPA:HPA021483
MIM:606517 neXtProt:NX_A9YTQ3 PharmGKB:PA24639 eggNOG:NOG314160
HOGENOM:HOG000033866 HOVERGEN:HBG073122 InParanoid:A9YTQ3 KO:K09094
OMA:AEGMIFY GenomeRNAi:57491 NextBio:63778 ArrayExpress:A9YTQ3
Bgee:A9YTQ3 Genevestigator:A9YTQ3 GO:GO:0033235 Uniprot:A9YTQ3
Length = 701
Score = 87 (35.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 54 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 83
Score = 34 (17.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 38 WSRDGPSPSKSVKGIPHNLQEGQDS 62
W+ D P + V G P L+ G D+
Sbjct: 177 WAMD---PPQVVFGQPPPLETGDDA 198
>UNIPROTKB|E5RGQ2 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0000122 Gene3D:4.10.280.10 EMBL:AC010442 EMBL:AC118458
HGNC:HGNC:346 GO:GO:0033235 IPI:IPI00982577
ProteinModelPortal:E5RGQ2 SMR:E5RGQ2 Ensembl:ENST00000504625
ArrayExpress:E5RGQ2 Bgee:E5RGQ2 Uniprot:E5RGQ2
Length = 81
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>UNIPROTKB|E5RFG4 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0000122
GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AC010442 EMBL:AC118458
HGNC:HGNC:346 GO:GO:0033235 IPI:IPI00982017
ProteinModelPortal:E5RFG4 SMR:E5RFG4 Ensembl:ENST00000510400
ArrayExpress:E5RFG4 Bgee:E5RFG4 Uniprot:E5RFG4
Length = 157
Score = 87 (35.7 bits), Expect = 0.00052, P = 0.00052
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 1 MLPLPAAITSQLDKASIIRLTISYLKLRDF 30
+LP P I S+LDK S++RL++SYL+++ F
Sbjct: 50 LLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79
>UNIPROTKB|Q64F54 [details] [associations]
symbol:Q64F54 "Hypoxia-inducible factor 1 alpha subunit"
species:43179 "Spermophilus tridecemlineatus" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY713478 ProteinModelPortal:Q64F54
SMR:Q64F54 Uniprot:Q64F54
Length = 821
Score = 98 (39.6 bits), Expect = 0.00063, P = 0.00063
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP ++S LDKAS++RLTISYL +R GD
Sbjct: 44 LPLPHXVSSHLDKASVMRLTISYLLVRKLLDAGD 77
>ZFIN|ZDB-GENE-080917-55 [details] [associations]
symbol:hif1aa "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-080917-55 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:BX649520 IPI:IPI00506879
Ensembl:ENSDART00000044282 Bgee:F1QNB9 Uniprot:F1QNB9
Length = 760
Score = 97 (39.2 bits), Expect = 0.00073, P = 0.00073
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLR 28
LPLP ++TS LDKAS++RL +SYL+LR
Sbjct: 43 LPLPHSVTSNLDKASVMRLALSYLRLR 69
>UNIPROTKB|F1NJK2 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 IPI:IPI00597728
EMBL:AADN02003885 EMBL:AADN02003886 Ensembl:ENSGALT00000019364
ArrayExpress:F1NJK2 Uniprot:F1NJK2
Length = 810
Score = 97 (39.2 bits), Expect = 0.00079, P = 0.00079
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 44 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 77
>UNIPROTKB|F1NQK5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0030154 GO:GO:0005730 GO:GO:0035774
GO:GO:0006110 GO:GO:0043565 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0005667 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0014850
GO:GO:0030949 GO:GO:0071347 GO:GO:0010634 GO:GO:0046886
GO:GO:0043619 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OMA:QNAQRKR GO:GO:0001922
GO:GO:0051541 GO:GO:2001054 GO:GO:0032909 EMBL:AADN02003885
EMBL:AADN02003886 IPI:IPI00822528 Ensembl:ENSGALT00000037380
ArrayExpress:F1NQK5 Uniprot:F1NQK5
Length = 811
Score = 97 (39.2 bits), Expect = 0.00079, P = 0.00079
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 44 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 77
>UNIPROTKB|Q9YIB9 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 OrthoDB:EOG40CHGP EMBL:AB013746
IPI:IPI00597728 PIR:JC7619 RefSeq:NP_989628.1 UniGene:Gga.4933
ProteinModelPortal:Q9YIB9 SMR:Q9YIB9 STRING:Q9YIB9 PRIDE:Q9YIB9
GeneID:374177 KEGG:gga:374177 CTD:3091 KO:K08268 NextBio:20813683
Uniprot:Q9YIB9
Length = 811
Score = 97 (39.2 bits), Expect = 0.00079, P = 0.00079
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 35
LPLP +++ LDKASI+RLTISYL++R G+
Sbjct: 44 LPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGE 77
>UNIPROTKB|F1S5K9 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CU570958
Ensembl:ENSSSCT00000009245 Uniprot:F1S5K9
Length = 863
Score = 83 (34.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 16/25 (64%), Positives = 22/25 (88%)
Query: 2 LPLPAAITSQLDKASIIRLTISYLK 26
LPLP +++S LDKASI+RL IS+L+
Sbjct: 33 LPLPHSVSSHLDKASIMRLAISFLR 57
Score = 37 (18.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 28 RDFSGHGDPPWSRDGPSPSKSVKGI 52
+D SG GDPP S K +K +
Sbjct: 712 QDMSG-GDPPGSSASQLMWKRMKSL 735
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 62 62 0.00091 102 3 11 23 0.46 28
29 0.41 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 433 (46 KB)
Total size of DFA: 78 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.15u 0.18s 8.33t Elapsed: 00:00:00
Total cpu time: 8.15u 0.18s 8.33t Elapsed: 00:00:00
Start: Thu Aug 15 13:59:21 2013 End: Thu Aug 15 13:59:21 2013