Query psy17816
Match_columns 235
No_of_seqs 298 out of 1713
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 23:45:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17816.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17816hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3146|consensus 100.0 2.9E-50 6.2E-55 324.6 24.0 224 1-229 1-226 (228)
2 cd03382 PAP2_dolichyldiphospha 100.0 3.4E-30 7.4E-35 206.5 19.6 159 12-176 1-159 (159)
3 cd03388 PAP2_SPPase1 PAP2_like 99.9 2.6E-24 5.7E-29 171.0 16.4 143 22-175 3-150 (151)
4 cd03392 PAP2_like_2 PAP2_like_ 99.9 2.6E-23 5.6E-28 169.9 19.0 150 22-180 28-180 (182)
5 cd03395 PAP2_like_4 PAP2_like_ 99.9 4E-23 8.8E-28 168.3 17.5 102 63-180 67-175 (177)
6 PRK10699 phosphatidylglyceroph 99.9 5.7E-23 1.2E-27 173.8 18.5 116 58-186 82-237 (244)
7 cd03390 PAP2_containing_1_like 99.9 5.9E-23 1.3E-27 169.6 17.5 119 56-177 49-191 (193)
8 PLN02715 lipid phosphate phosp 99.9 1.7E-22 3.7E-27 177.5 20.1 160 13-178 78-267 (327)
9 cd03385 PAP2_BcrC_like PAP2_li 99.9 2.5E-22 5.5E-27 158.4 17.1 104 56-176 36-143 (144)
10 PLN02525 phosphatidic acid pho 99.9 4.1E-22 8.8E-27 177.2 19.6 150 25-181 8-166 (352)
11 PLN02731 Putative lipid phosph 99.9 2E-22 4.4E-27 177.1 17.3 160 13-178 72-261 (333)
12 cd03391 PAP2_containing_2_like 99.9 3.7E-22 8E-27 160.0 17.2 141 19-174 10-157 (159)
13 PLN02250 lipid phosphate phosp 99.9 4.7E-22 1E-26 174.2 19.1 160 13-178 53-243 (314)
14 cd03384 PAP2_wunen PAP2, wunen 99.9 1.5E-22 3.2E-27 160.8 13.8 114 56-174 7-148 (150)
15 cd03383 PAP2_diacylglycerolkin 99.9 2E-22 4.4E-27 151.3 13.6 100 54-178 9-108 (109)
16 PRK11837 undecaprenyl pyrophos 99.9 3.2E-21 6.9E-26 160.1 20.4 106 56-178 62-171 (202)
17 cd03389 PAP2_lipid_A_1_phospha 99.9 1.4E-21 2.9E-26 160.6 17.5 105 55-177 71-184 (186)
18 cd03393 PAP2_like_3 PAP2_like_ 99.9 8.1E-22 1.8E-26 151.9 13.4 105 54-174 14-123 (125)
19 PRK09597 lipid A 1-phosphatase 99.9 4.1E-21 8.9E-26 155.8 16.8 114 46-176 69-185 (190)
20 cd03381 PAP2_glucose_6_phospha 99.9 2.7E-21 5.8E-26 163.3 14.8 126 48-178 11-153 (235)
21 cd03394 PAP2_like_5 PAP2_like_ 99.9 2.3E-21 5E-26 145.2 11.7 99 56-174 6-104 (106)
22 cd03396 PAP2_like_6 PAP2_like_ 99.8 1.8E-19 3.9E-24 149.3 18.7 112 56-178 70-196 (197)
23 KOG3030|consensus 99.8 2.8E-19 6.1E-24 156.5 17.8 119 56-178 113-260 (317)
24 smart00014 acidPPc Acid phosph 99.8 3.8E-19 8.3E-24 134.9 12.6 104 60-175 2-115 (116)
25 COG0671 PgpB Membrane-associat 99.7 9.8E-17 2.1E-21 132.3 16.8 118 55-181 93-213 (232)
26 cd01610 PAP2_like PAP2_like pr 99.7 1.4E-16 3E-21 120.2 14.3 105 59-175 9-121 (122)
27 PF01569 PAP2: PAP2 superfamil 99.7 9.2E-18 2E-22 128.7 5.6 114 56-180 3-125 (129)
28 KOG2822|consensus 99.7 1E-15 2.3E-20 134.0 12.0 159 17-183 76-240 (407)
29 cd03380 PAP2_like_1 PAP2_like_ 99.6 6.6E-15 1.4E-19 122.9 12.9 91 65-173 105-205 (209)
30 cd03397 PAP2_acid_phosphatase 99.6 1.7E-14 3.6E-19 122.4 13.8 87 68-172 116-211 (232)
31 KOG4268|consensus 99.6 1.8E-14 3.9E-19 112.0 11.2 105 56-174 67-175 (189)
32 cd03398 PAP2_haloperoxidase PA 99.4 6.9E-13 1.5E-17 112.5 10.4 106 65-174 98-229 (232)
33 cd03386 PAP2_Aur1_like PAP2_li 99.4 2.8E-11 6.2E-16 99.3 17.2 66 91-173 115-180 (186)
34 PF02681 DUF212: Divergent PAP 98.9 3.1E-09 6.7E-14 82.7 6.2 97 60-172 8-141 (141)
35 COG1963 Uncharacterized protei 98.8 3.1E-08 6.7E-13 76.3 9.5 104 60-179 14-151 (153)
36 PF14378 PAP2_3: PAP2 superfam 98.4 1.3E-05 2.9E-10 65.8 15.3 36 136-171 153-188 (191)
37 COG3907 PAP2 (acid phosphatase 98.2 7.9E-05 1.7E-09 60.9 13.1 113 56-179 110-237 (249)
38 PF14360 PAP2_C: PAP2 superfam 96.5 0.016 3.4E-07 40.3 6.8 37 131-171 32-68 (74)
39 PF10261 Scs3p: Inositol phosp 83.4 4.4 9.5E-05 34.5 6.7 30 142-173 206-235 (238)
40 PF12270 Cyt_c_ox_IV: Cytochro 77.6 31 0.00068 26.8 13.3 38 62-101 49-89 (137)
41 TIGR03546 conserved hypothetic 58.6 17 0.00037 28.9 4.1 39 161-199 110-152 (154)
42 PF12084 DUF3561: Protein of u 57.7 76 0.0016 23.5 8.1 85 90-178 20-105 (107)
43 KOG3750|consensus 52.3 48 0.001 28.7 6.0 26 153-181 219-244 (270)
44 KOG3058|consensus 48.4 23 0.0005 31.9 3.7 22 147-168 249-270 (351)
45 PRK12848 ubiA 4-hydroxybenzoat 46.3 1.9E+02 0.0042 24.9 12.0 34 145-179 124-157 (282)
46 PRK10726 hypothetical protein; 45.2 1.2E+02 0.0027 22.3 9.2 85 90-178 17-102 (105)
47 TIGR01474 ubiA_proteo 4-hydrox 43.2 2.2E+02 0.0047 24.6 11.7 40 140-180 117-156 (281)
48 PF06295 DUF1043: Protein of u 42.1 28 0.00062 26.6 2.9 19 161-179 2-20 (128)
49 PF15086 UPF0542: Uncharacteri 40.6 36 0.00079 23.4 2.9 33 17-49 12-45 (74)
50 PRK12870 ubiA 4-hydroxybenzoat 37.3 2.8E+02 0.0061 24.1 9.9 28 153-180 135-162 (290)
51 PLN02809 4-hydroxybenzoate non 35.5 3E+02 0.0065 24.0 12.1 39 141-180 123-161 (289)
52 PRK12895 ubiA prenyltransferas 35.5 3E+02 0.0066 24.0 12.4 38 143-180 116-153 (286)
53 PF11712 Vma12: Endoplasmic re 33.4 1.7E+02 0.0037 22.5 6.2 40 135-174 87-126 (142)
54 PF11808 DUF3329: Domain of un 32.0 1.9E+02 0.004 20.5 9.6 35 194-228 50-88 (90)
55 PRK14772 lipoprotein signal pe 31.4 2.4E+02 0.0051 23.2 6.9 23 57-79 109-131 (190)
56 PF11361 DUF3159: Protein of u 30.9 2.2E+02 0.0047 23.4 6.6 41 137-179 32-72 (187)
57 cd00922 Cyt_c_Oxidase_IV Cytoc 27.5 1E+02 0.0022 23.8 4.0 66 143-208 59-126 (136)
58 PRK14783 lipoprotein signal pe 27.1 3E+02 0.0064 22.5 6.7 20 57-76 97-116 (182)
59 PRK14788 lipoprotein signal pe 27.0 1.7E+02 0.0036 24.3 5.3 10 12-21 38-47 (200)
60 KOG1519|consensus 26.8 38 0.00082 28.2 1.4 24 156-179 210-233 (297)
61 COG5336 Uncharacterized protei 26.3 67 0.0015 24.0 2.5 16 159-174 50-65 (116)
62 PF13373 DUF2407_C: DUF2407 C- 26.3 88 0.0019 24.4 3.4 22 154-175 85-106 (140)
63 PRK12847 ubiA 4-hydroxybenzoat 26.1 4.2E+02 0.0092 22.7 12.0 35 144-179 126-160 (285)
64 PF01219 DAGK_prokar: Prokaryo 25.7 2.6E+02 0.0057 20.5 5.7 26 60-85 50-75 (104)
65 COG4129 Predicted membrane pro 25.5 61 0.0013 29.1 2.6 10 161-170 60-69 (332)
66 PRK11677 hypothetical protein; 23.8 80 0.0017 24.5 2.7 18 161-178 6-23 (134)
67 PRK12874 ubiA prenyltransferas 23.7 4.9E+02 0.011 22.6 13.2 39 141-180 125-163 (291)
68 PF02936 COX4: Cytochrome c ox 23.6 2.5E+02 0.0054 21.9 5.5 71 138-208 54-126 (142)
69 PF09512 ThiW: Thiamine-precur 23.6 3.7E+02 0.0081 21.3 6.4 65 140-205 48-121 (150)
70 PRK14776 lipoprotein signal pe 22.6 2.7E+02 0.0058 22.4 5.6 9 12-20 47-55 (170)
71 PF05297 Herpes_LMP1: Herpesvi 22.4 29 0.00063 30.5 0.0 32 23-54 46-77 (381)
72 KOG4580|consensus 22.4 3.1E+02 0.0067 20.5 5.3 16 17-32 36-51 (112)
73 PF14362 DUF4407: Domain of un 21.5 5.1E+02 0.011 22.4 7.7 8 95-102 8-15 (301)
74 COG1970 MscL Large-conductance 21.1 1.5E+02 0.0032 22.9 3.6 34 157-190 15-48 (130)
75 PF11085 YqhR: Conserved membr 20.7 50 0.0011 26.7 1.0 26 165-190 98-123 (173)
No 1
>KOG3146|consensus
Probab=100.00 E-value=2.9e-50 Score=324.62 Aligned_cols=224 Identities=41% Similarity=0.644 Sum_probs=203.5
Q ss_pred CCCCC--CCCCcccceeeeecCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCC
Q psy17816 1 MDSTD--SVEWTPLTITYVEYPKGDLVGKFLALLSLTPFGVLIGFVTLILFRRDLHTVTFFVGLILNEMINMTLKYIIQE 78 (235)
Q Consensus 1 ~~~~~--~~~~~~~~lt~v~y~~~d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~r 78 (235)
||+++ ++++.|+++||++|+++|..+..++++++.|+++.+++.++++++||+++++..+|++.++.+|.++|+++++
T Consensus 1 ~dg~~~~~~~~~~v~~thv~y~~~d~~g~~la~~sL~p~~V~~~f~S~~l~rrEl~a~~~~~G~v~Ne~in~viK~il~q 80 (228)
T KOG3146|consen 1 MDGADAIPALEQPVTLTHVEYRIGDVLGHLLAYFSLSPVFVSAGFLSVFLFRRELAAIWFVIGQVSNEFINVVIKNILKQ 80 (228)
T ss_pred CCccccCCccccccccceeeeccchHHHHHHHHHHHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45555 4567899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCCh
Q psy17816 79 PRPARDHIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTW 158 (235)
Q Consensus 79 pRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~ 158 (235)
|||+..+..+.+.+|||||+|+|+|+++++|..+..+.+.+..+. .....+...+.+.++..+++||||+++|+.
T Consensus 81 pRP~~~~~~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~-----s~~~~i~s~~~laLs~~v~~sRVyl~yHt~ 155 (228)
T KOG3146|consen 81 PRPVSFPDTTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNF-----SRFLFIKSGLLLALSFYVCYSRVYLKYHTL 155 (228)
T ss_pred CCCCCCCccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 999887766778899999999999999999999988877654221 223334567778899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhhhhhcccCCcchhhHHHHHHhHHHHHhhhhhh
Q psy17816 159 NQILYGAIIGSILGTGWFIVTQLFLSPLFPLITQWRISEMLMIRDTTLIPNILWFEYTHCRQETRARSRKL 229 (235)
Q Consensus 159 sDVl~G~~iG~~~~~~~~~l~~~~~~~~~~~~~~w~~~~~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (235)
+||++|+++|.++|.+||.+++.+..|+|||+++||++++|++||+.++|+++++||...|.+.|+++++.
T Consensus 156 sQVv~G~ivG~l~g~~Wf~~v~slll~~f~~~l~~~i~~ffyi~dt~~~~~~~~fe~~~~~~~~kn~rs~~ 226 (228)
T KOG3146|consen 156 SQVVVGAIVGGLVGILWFYLVNSLLLGLFPWILSLPISRFFYIKDTSLIPKVLHFEYYVARAWFKNQRSNN 226 (228)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhhccccCCchHHHHHHHHHHHHhhhhhhc
Confidence 99999999999999999999999988999999999999999999999999999999999999999988774
No 2
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.97 E-value=3.4e-30 Score=206.53 Aligned_cols=159 Identities=48% Similarity=0.813 Sum_probs=129.9
Q ss_pred cceeeeecCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCccCC
Q psy17816 12 LTITYVEYPKGDLVGKFLALLSLTPFGVLIGFVTLILFRRDLHTVTFFVGLILNEMINMTLKYIIQEPRPARDHIDKVSV 91 (235)
Q Consensus 12 ~~lt~v~y~~~d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~ 91 (235)
+++||++++++|..+..+.+.+..|+.+.+....++..+|+........+.+.+..++.++|..++||||+..... .+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~-~~~ 79 (159)
T cd03382 1 FSLTHVLYDPGDLLSFLLAYLSLLPVAILVGYATLILFRRELEAIYLFIGLLANEALNYVLKRIIKEPRPCSGAYF-VRS 79 (159)
T ss_pred CCcceEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCcC-CCC
Confidence 4789999999999999999999999999888888788888877777777888889999999999999999865322 457
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHH
Q psy17816 92 PYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSIL 171 (235)
Q Consensus 92 ~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~ 171 (235)
++||||||++.+++++++..+....+.+.. .++.++.....+.+++++++++||+|+|+||++||++|+++|.++
T Consensus 80 ~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~ 154 (159)
T cd03382 80 GYGMPSSHSQFMGFFAVYLLLFIYLRLGRL-----NSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILL 154 (159)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHcccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 899999999987767767665443332210 113455556667788899999999999999999999999999999
Q ss_pred HHHHH
Q psy17816 172 GTGWF 176 (235)
Q Consensus 172 ~~~~~ 176 (235)
+.+|+
T Consensus 155 ~~~~~ 159 (159)
T cd03382 155 GILWF 159 (159)
T ss_pred HHhcC
Confidence 88874
No 3
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.92 E-value=2.6e-24 Score=171.04 Aligned_cols=143 Identities=24% Similarity=0.285 Sum_probs=94.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC--c---cCCCCCCC
Q psy17816 22 GDLVGKFLALLSLTPFGVLIGFVTLILFRRDLHTVTFFVGLILNEMINMTLKYIIQEPRPARDHID--K---VSVPYGMP 96 (235)
Q Consensus 22 ~d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~--~---~~~~~sfP 96 (235)
-|.+....+.++..++.+. ++..+++.+++.....++.+.+++..++..+|..++||||+..+.. . ...++|||
T Consensus 3 ld~~~~~it~lg~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFP 81 (151)
T cd03388 3 LDYYFAFTALLGTHTFYIL-FLPFLFWNGDPYVGRDLVVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFP 81 (151)
T ss_pred HHHHHHHHHHhcchHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCC
Confidence 3556666666666544332 2222223333323445555666778889999999999999864311 1 35789999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHH
Q psy17816 97 SSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGW 175 (235)
Q Consensus 97 SgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~ 175 (235)
|||++.++++ +..+....+++. +..+........++++++++||+|+|+|||+||++|+++|++++.+|
T Consensus 82 SgH~~~a~~~--~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 82 STHAMNATAI--SFYLLIYLYDRY--------QYPFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred hHHHHHHHHH--HHHHHHHHHHhc--------cchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999977444 443333332221 11233344556778899999999999999999999999999887665
No 4
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.92 E-value=2.6e-23 Score=169.95 Aligned_cols=150 Identities=20% Similarity=0.267 Sum_probs=101.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHH--HHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCccCCCCCCCCh
Q psy17816 22 GDLVGKFLALLSLTPFGVLIGFV--TLILFRRDLH-TVTFFVGLILNEMINMTLKYIIQEPRPARDHIDKVSVPYGMPSS 98 (235)
Q Consensus 22 ~d~~~~~~a~~~l~p~~i~~~~~--~~~~~~r~~~-~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~~~sfPSg 98 (235)
-|.+....+.++..+..+.+..+ .++..+++.+ ...+..+++.+..++..+|..++||||...+.. ...++|||||
T Consensus 28 ~~~~~~~it~lg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-~~~~~sfPSg 106 (182)
T cd03392 28 LTAFMTAITFLGSPAVLLIIVLLLALLLLLKRRRRAALFLLLALLGGGALNTLLKLLVQRPRPPLHLLV-PEGGYSFPSG 106 (182)
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCCCCCCcH
Confidence 44555566655554444332222 2233444433 455556677788999999999999999865421 3478999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 99 HAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 99 Ha~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
|++.+ ++++..+......+. ..+..|.....+.+.+++.+++||+|+|+||++||++|+++|.+++.+.+.+
T Consensus 107 Ha~~~--~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDvl~G~~lG~~~~~~~~~~ 178 (182)
T cd03392 107 HAMGA--TVLYGFLAYLLARRL------PRRRVRILLLILAAILILLVGLSRLYLGVHYPSDVLAGWLLGLAWLALLILL 178 (182)
T ss_pred HHHHH--HHHHHHHHHHHHHHc------chhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 99976 444444433333221 1123455566677889999999999999999999999999998888776655
Q ss_pred HH
Q psy17816 179 TQ 180 (235)
Q Consensus 179 ~~ 180 (235)
.+
T Consensus 179 ~~ 180 (182)
T cd03392 179 YR 180 (182)
T ss_pred Hh
Confidence 44
No 5
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.91 E-value=4e-23 Score=168.27 Aligned_cols=102 Identities=24% Similarity=0.370 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCC-------CccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHH
Q psy17816 63 ILNEMINMTLKYIIQEPRPARDHI-------DKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFI 135 (235)
Q Consensus 63 ~~~~~l~~~lK~~i~rpRP~~~~~-------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~ 135 (235)
+.+.+++..+|..++||||..... .+...++||||||++.++++ +..+....+++ ..
T Consensus 67 ~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~--~~~l~~~~~~~--------------~~ 130 (177)
T cd03395 67 FADQLASGFLKPLVARLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFAL--ALFIWLFFRRG--------------LF 130 (177)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccccccccccCCCCCCCCChHHHHHHHHH--HHHHHHHHHHH--------------HH
Confidence 445678899999999999986421 12457899999999977444 33333332211 12
Q ss_pred HHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 136 VLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 136 ~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
..+.++++++|++||+|+|+|||+||++|+++|+.++.+.+.+.+
T Consensus 131 ~~~~~~~~~~v~~SRvylG~H~psDVl~G~~lG~~~~~~~~~~~~ 175 (177)
T cd03395 131 SPVLLLWALLVGYSRVYVGVHYPGDVIAGALIGIISGLLFYLLFS 175 (177)
T ss_pred HHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677789999999999999999999999999988887765543
No 6
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.91 E-value=5.7e-23 Score=173.80 Aligned_cols=116 Identities=22% Similarity=0.251 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCC------CCCCC----------------------------------ccCCCCCCCC
Q psy17816 58 FFVGLILNEMINMTLKYIIQEPRPA------RDHID----------------------------------KVSVPYGMPS 97 (235)
Q Consensus 58 ~~~~~~~~~~l~~~lK~~i~rpRP~------~~~~~----------------------------------~~~~~~sfPS 97 (235)
+.+++++++.++.++|+.++||||+ ...++ +++.+|||||
T Consensus 82 l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~w~~~hw~~~~gySFPS 161 (244)
T PRK10699 82 LAAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPVDEFYTLKRAERGELVKEQLAEQSNIPQWLRSHWQKETGFAFPS 161 (244)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCHHHHHccCHHHHHHHHHHHHhccccCCHHHHhccCCCCCCCCCh
Confidence 3445677899999999999999995 11100 3568899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHH
Q psy17816 98 SHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFI 177 (235)
Q Consensus 98 gHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~ 177 (235)
||++++++++.+....+..++ +.....+..+++.++++||+|+|+|||+||++|.++|.+++.+.+.
T Consensus 162 GHa~~a~~~~l~~~~ll~~~~-------------~~~~~~~~~~wa~~v~~SRvyLGvH~psDVlaG~llG~~~~~l~~~ 228 (244)
T PRK10699 162 GHTMFAASWALLAVGLLWPRR-------------RYKTVALLMLWATGVMGSRLLLGMHWPRDLVVATLISWLLVTVATW 228 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999976544333222222111 1123355677899999999999999999999999999999998888
Q ss_pred HHHHhhcch
Q psy17816 178 VTQLFLSPL 186 (235)
Q Consensus 178 l~~~~~~~~ 186 (235)
+.++...|+
T Consensus 229 l~~~~~~~~ 237 (244)
T PRK10699 229 LAQRICGPL 237 (244)
T ss_pred HHHHHhccc
Confidence 877666554
No 7
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.91 E-value=5.9e-23 Score=169.57 Aligned_cols=119 Identities=23% Similarity=0.340 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC-----CCc-------------------cCCCCCCCChhHHHHHHHHHHHH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH-----IDK-------------------VSVPYGMPSSHAQFMWFFSTYIL 111 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~-----~~~-------------------~~~~~sfPSgHa~~~~~~a~~~~ 111 (235)
+.++.+.+++.+++.++|..++|+||+... ..+ .+..+||||||++.+++.++++.
T Consensus 49 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~ 128 (193)
T cd03390 49 LGLLLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLS 128 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHH
Confidence 344566777889999999999999997421 100 12347999999998755555555
Q ss_pred HHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHH
Q psy17816 112 CFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFI 177 (235)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~ 177 (235)
+++..+.+... ..++.++..+..+.+++++++|+||+|+|.||++||++|+++|++++.+.+.
T Consensus 129 l~l~~~~~~~~---~~~~~~~~~~~~~~~~~a~~v~~SRi~~g~H~~sDVlaG~~lG~~~a~~~~~ 191 (193)
T cd03390 129 LYLAGKLHIFD---PRGSSWRLLLALLPLLLAILVAVSRTRDYRHHFSDVIAGSLIGLIIAYLSYR 191 (193)
T ss_pred HHHHHHhhccc---ccchHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHheeE
Confidence 44333322100 0234566666777888999999999999999999999999999988887653
No 8
>PLN02715 lipid phosphate phosphatase
Probab=99.90 E-value=1.7e-22 Score=177.55 Aligned_cols=160 Identities=23% Similarity=0.341 Sum_probs=106.0
Q ss_pred ceeeeecCCCCh-hHH--HHHHHHHHHHHHHHHHHHHHHHhhhHHH-----HHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Q psy17816 13 TITYVEYPKGDL-VGK--FLALLSLTPFGVLIGFVTLILFRRDLHT-----VTFFVGLILNEMINMTLKYIIQEPRPARD 84 (235)
Q Consensus 13 ~lt~v~y~~~d~-~~~--~~a~~~l~p~~i~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~l~~~lK~~i~rpRP~~~ 84 (235)
|+|.+.||..+. +.. +..+..++|+.++ +...+.+|+... +.++.+.+++.+++.++|+.++||||+..
T Consensus 78 ~~~~i~yP~~~~tVp~~~l~vi~~liPii~i---~~~~~~r~~~~~~~~~~l~l~~al~~t~lit~~lK~~vGRpRPdfl 154 (327)
T PLN02715 78 MMTDLKYPFKDNTVPIWSVPVYAVLLPIILF---VCFYLKRRCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFY 154 (327)
T ss_pred cchhccCCCCCCcccHHHHHHHHHHHHHHHH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCch
Confidence 466677876542 221 1222234565332 222223333221 45566777888999999999999999742
Q ss_pred C-----C----C-------------ccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHH
Q psy17816 85 H-----I----D-------------KVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLL 142 (235)
Q Consensus 85 ~-----~----~-------------~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 142 (235)
. . + -.++..||||||++++++.++|+.+++..+.+..+. ....+|..+..+.+++
T Consensus 155 ~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~~kl~~~~~---~~~~~k~~l~~lpll~ 231 (327)
T PLN02715 155 WRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNG---EGHVAKLCLVIFPLLA 231 (327)
T ss_pred hhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhhccccc---cchHHHHHHHHHHHHH
Confidence 1 0 0 014568999999998866666665555443332111 2345777777888999
Q ss_pred HHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 143 TCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 143 a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
+++|++||++++.|+++||++|+++|++++++.|..
T Consensus 232 A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~~ 267 (327)
T PLN02715 232 ACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYRQ 267 (327)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888766543
No 9
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.90 E-value=2.5e-22 Score=158.37 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC----CCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH----IDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYW 131 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~----~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 131 (235)
.....+.+++.+++.++|..++||||...+ ..+.+.++||||||++.+.+++ ..+.. +.+ +
T Consensus 36 ~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgH~~~~~~~~--~~l~~--~~~---------~-- 100 (144)
T cd03385 36 LFATIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPSDHTTLFFSIA--FSLLL--RRR---------K-- 100 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCcHHHHHHHHHH--HHHHH--Hhh---------H--
Confidence 444566677888999999999999997532 1123467999999999764333 22221 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHH
Q psy17816 132 KGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWF 176 (235)
Q Consensus 132 r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~ 176 (235)
....+..++++++++||+|+|+|||+||++|+++|++++.+.+
T Consensus 101 --~~~~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 101 --WAGWILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 1234566788999999999999999999999999988876643
No 10
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.90 E-value=4.1e-22 Score=177.20 Aligned_cols=150 Identities=21% Similarity=0.289 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC---------ccCCCCCC
Q psy17816 25 VGKFLALLSLTPFGVLIGFVTLILFRRDLHTVTFFVGLILNEMINMTLKYIIQEPRPARDHID---------KVSVPYGM 95 (235)
Q Consensus 25 ~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~---------~~~~~~sf 95 (235)
++...+.+...+++++++.+ .++.++......+....+.+..++..+|..+++|||...+.+ ....+|||
T Consensus 8 ~f~~~~~l~~~~Fyi~~Lp~-l~w~~~~~~~~~lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsF 86 (352)
T PLN02525 8 FFSGLSCVVSVPFYTAFLPL-LFWSGHGKLARQMTLLMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGL 86 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHccHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCC
Confidence 55555666666665554332 233333333344445566677889999999999999864311 23468999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHH
Q psy17816 96 PSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGW 175 (235)
Q Consensus 96 PSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~ 175 (235)
|||||+++++++.++...+..+.+. ..+.++.....+..++++++++||+|+|+|+++||++|+++|++++.++
T Consensus 87 PSgHt~nA~av~~~ll~~l~~~~~~------~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~ 160 (352)
T PLN02525 87 PSSHTLNTVCLSGYLLHYVLSYLQN------VDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFW 160 (352)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccc------cchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHH
Confidence 9999998866665554433322110 1222333334566778999999999999999999999999999999988
Q ss_pred HHHHHH
Q psy17816 176 FIVTQL 181 (235)
Q Consensus 176 ~~l~~~ 181 (235)
+.+...
T Consensus 161 ~~~~~~ 166 (352)
T PLN02525 161 LTVDEY 166 (352)
T ss_pred HHHHHH
Confidence 877764
No 11
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.90 E-value=2e-22 Score=177.10 Aligned_cols=160 Identities=19% Similarity=0.317 Sum_probs=108.2
Q ss_pred ceeeeecC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-----HHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Q psy17816 13 TITYVEYP---KGDLVGKFLALLSLTPFGVLIGFVTLILFRRDLHT-----VTFFVGLILNEMINMTLKYIIQEPRPARD 84 (235)
Q Consensus 13 ~lt~v~y~---~~d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~l~~~lK~~i~rpRP~~~ 84 (235)
|++.+.|| .......+..+..++|+++++++ ...+|+... +.++.+.+++.+++.++|+.++||||+..
T Consensus 72 ~~~~isyP~~~etVp~~~l~ii~~liPi~iii~~---~~~~r~~~~l~~~ilgll~s~~~t~liT~ilK~~vGRpRPdfl 148 (333)
T PLN02731 72 MMTDLSYPLKSNTVPIWSVPVYAMLLPLVIFIFI---YFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFF 148 (333)
T ss_pred ccccccCCCCCCcccHHHHHHHHHHHHHHheeee---eeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCch
Confidence 34545555 33344445555566777655332 223344321 34556778899999999999999999742
Q ss_pred CC---------C-------------ccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHH
Q psy17816 85 HI---------D-------------KVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLL 142 (235)
Q Consensus 85 ~~---------~-------------~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 142 (235)
.. + -.++..|||||||+++++.++|+.+++..+.+..+. ....+|..+..+.+++
T Consensus 149 ~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~~kl~~~~~---~~~~~rl~l~~lpll~ 225 (333)
T PLN02731 149 WRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDG---KGHVAKLCIVILPLLF 225 (333)
T ss_pred hhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHHHhhhhhcc---cchhHHHHHHHHHHHH
Confidence 10 0 013457999999998866666666555433321111 2345677777888999
Q ss_pred HHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 143 TCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 143 a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
+++||+||+++++|+++||++|+++|++++++.|..
T Consensus 226 A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~~ 261 (333)
T PLN02731 226 AALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQ 261 (333)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776543
No 12
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.90 E-value=3.7e-22 Score=159.96 Aligned_cols=141 Identities=21% Similarity=0.188 Sum_probs=94.0
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHH--HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC----CccCC
Q psy17816 19 YPKGDLVGKFLALLSLTPFGVLIGFVTLIL-FRRDLHT--VTFFVGLILNEMINMTLKYIIQEPRPARDHI----DKVSV 91 (235)
Q Consensus 19 y~~~d~~~~~~a~~~l~p~~i~~~~~~~~~-~~r~~~~--~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~----~~~~~ 91 (235)
|.+-|.+.+.++.++.....+.+..+.++. .+++.+. ..++.+.+++.+++.++|..++||||+.... ....+
T Consensus 10 ~~~~~~~~~~~t~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~ 89 (159)
T cd03391 10 WGPVRPLVKLLELSGHGIPWLAGTISCLWISSSPAGQEVLVNLLLGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVD 89 (159)
T ss_pred chhhHHHHHHHHHhcCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCC
Confidence 455677788888776654433332222222 2333332 3445666678888999999999999986421 12235
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHH
Q psy17816 92 PYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSIL 171 (235)
Q Consensus 92 ~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~ 171 (235)
++||||||++.++++ +..+....+++ .......+.+++++++||+|+|+|||+||++|+++|+++
T Consensus 90 ~~SFPSGHa~~a~a~--a~~l~~~~~~~-------------~~~~~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~ 154 (159)
T cd03391 90 KYSFPSGHASRAAFV--ARFLLNHLVLA-------------VPLRVLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLE 154 (159)
T ss_pred CCCCCchhHHHHHHH--HHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHH
Confidence 789999999976444 33333332211 113345667899999999999999999999999999887
Q ss_pred HHH
Q psy17816 172 GTG 174 (235)
Q Consensus 172 ~~~ 174 (235)
+..
T Consensus 155 ~~~ 157 (159)
T cd03391 155 ALL 157 (159)
T ss_pred HHh
Confidence 754
No 13
>PLN02250 lipid phosphate phosphatase
Probab=99.89 E-value=4.7e-22 Score=174.17 Aligned_cols=160 Identities=21% Similarity=0.388 Sum_probs=104.8
Q ss_pred ceeeeecCCC-ChhHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHH-----HHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Q psy17816 13 TITYVEYPKG-DLVGKF--LALLSLTPFGVLIGFVTLILFRRDLHT-----VTFFVGLILNEMINMTLKYIIQEPRPARD 84 (235)
Q Consensus 13 ~lt~v~y~~~-d~~~~~--~a~~~l~p~~i~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~l~~~lK~~i~rpRP~~~ 84 (235)
+++.+.||.. +.+... ..+...+|+++++++ .+.+|+... +.++++.+++.+++.++|+.++||||+..
T Consensus 53 ~~~~i~yP~~~~tVp~~~l~ii~~~iP~~vilv~---~~~r~~~~~l~~~~l~ll~sv~~t~lit~~lK~~vGRpRPdfl 129 (314)
T PLN02250 53 MLTDLSYPLQDNTIPFWAVPLIAILLPFAVILVY---YFIRRDVYDLHHAILGLLFSVLITGVITDAIKDAVGRPRPDFF 129 (314)
T ss_pred chhhccCCCCCCeecHHHHHHHHHHHHHHHHHHH---HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCChh
Confidence 3456777743 332222 223344566544322 223333211 34556777788999999999999999752
Q ss_pred CC---C------------c--------cCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHH
Q psy17816 85 HI---D------------K--------VSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLL 141 (235)
Q Consensus 85 ~~---~------------~--------~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 141 (235)
.. + . .++..||||||++.+++.++|+.+++..+.+..+ .....+|..+..+.++
T Consensus 130 ~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLslyL~~kl~~~~---~~~~~~r~~l~~lpll 206 (314)
T PLN02250 130 WRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFD---RRGHVAKLCIVFLPLL 206 (314)
T ss_pred hhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHH
Confidence 10 0 0 1345899999999876665555554443322111 1234567777788889
Q ss_pred HHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 142 LTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 142 ~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
++++||+||++++.|+++||++|+++|++++.+.|..
T Consensus 207 ~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y~~ 243 (314)
T PLN02250 207 VAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCYLQ 243 (314)
T ss_pred HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888776544
No 14
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.89 E-value=1.5e-22 Score=160.77 Aligned_cols=114 Identities=23% Similarity=0.394 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC-----CCc-----------------------cCCCCCCCChhHHHHHHHH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH-----IDK-----------------------VSVPYGMPSSHAQFMWFFS 107 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~-----~~~-----------------------~~~~~sfPSgHa~~~~~~a 107 (235)
..++++.+++.+++.++|..++||||+... ... .+.++||||||++++++.+
T Consensus 7 ~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~~ 86 (150)
T cd03384 7 GVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYAA 86 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHHH
Confidence 456788888999999999999999997521 000 2457999999999887667
Q ss_pred HHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 108 TYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 108 ~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
+++.+++..+.+.. ..+.+|.++..+.+++++++++||||+|+||++||++|+++|++++.+
T Consensus 87 ~~l~l~l~~~~~~~-----~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 87 VFLALYLQARLKLR-----GSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 66665554433210 234567777788899999999999999999999999999999888764
No 15
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.89 E-value=2e-22 Score=151.29 Aligned_cols=100 Identities=27% Similarity=0.395 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHH
Q psy17816 54 HTVTFFVGLILNEMINMTLKYIIQEPRPARDHIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKG 133 (235)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~ 133 (235)
..-..+.+.+++.+++.++|..++||||+. .||||||++.+++++. .+....+. .
T Consensus 9 ~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~---------~sFPSgHt~~a~a~a~--~l~~~~~~--------------~ 63 (109)
T cd03383 9 PPHVTFVSLLIVIIVVVILKAYFGRGTPLE---------GGMPSGHAAIAFSIAT--AISLITNN--------------P 63 (109)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCCC---------CCCChHHHHHHHHHHH--HHHHHHhh--------------H
Confidence 334455677778899999999999999963 4899999997744443 33322211 1
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 134 FIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 134 ~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
....+.+++++++++||+|+|+|+++||++|+++|.+++.+.+.+
T Consensus 64 ~~~~~~~~~a~lv~~SRvylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 64 IISILSVLLAVMVAHSRVEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 134566778899999999999999999999999999988877654
No 16
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.89 E-value=3.2e-21 Score=160.11 Aligned_cols=106 Identities=18% Similarity=0.263 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC----CCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH----IDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYW 131 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~----~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 131 (235)
+.++++.+++.+++.++|..++||||+... ......++||||||++.+.++++. +....+.
T Consensus 62 ~~~~~~~~~~~~~~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~--~l~~~~~------------- 126 (202)
T PRK11837 62 IKIAIALAISLLVSWTIGHLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALA--FLFWHRL------------- 126 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHH--HHHHHHH-------------
Confidence 444556677888999999999999997532 112356799999999966443322 2111110
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 132 KGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 132 r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
....+.+.++++|++||||+|+|||+||++|+++|++.+.+.-.+
T Consensus 127 --~~~~~~~~~a~lva~SRVylGvHypsDVlgG~~lG~~~~~~~~~~ 171 (202)
T PRK11837 127 --WSGSLLMAIAVAIAWSRVYLGVHWPLDMLGALLVGMIGCLSAQII 171 (202)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 123455677899999999999999999999999998887665433
No 17
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.89 E-value=1.4e-21 Score=160.56 Aligned_cols=105 Identities=17% Similarity=0.266 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC---------CccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy17816 55 TVTFFVGLILNEMINMTLKYIIQEPRPARDHI---------DKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTY 125 (235)
Q Consensus 55 ~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~---------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~ 125 (235)
.+.+..+++.+.+++..+|..++||||..... .....++||||||++.++++ +..+....+.
T Consensus 71 ~~~l~~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~--~~~l~~~~~~------- 141 (186)
T cd03389 71 GLFLFATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAA--AAALALLFPR------- 141 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHH--HHHHHHHHHH-------
Confidence 34555666777888999999999999975321 11245689999999977444 4333333221
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHH
Q psy17816 126 KYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFI 177 (235)
Q Consensus 126 ~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~ 177 (235)
++ .....++.++++||+|+|+||++||++|+++|++++.+.+.
T Consensus 142 -----~~----~~~~~~~~lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 142 -----YR----WAFILLALLIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred -----HH----HHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 11 23356778999999999999999999999999988877653
No 18
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.88 E-value=8.1e-22 Score=151.88 Aligned_cols=105 Identities=26% Similarity=0.344 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC-----CccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccc
Q psy17816 54 HTVTFFVGLILNEMINMTLKYIIQEPRPARDHI-----DKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYE 128 (235)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~-----~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 128 (235)
....+..+.+++..++.++|..++||||+..+. +..+.++||||||++.++ +.+..+....++
T Consensus 14 ~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~--~~~~~~~~~~~~---------- 81 (125)
T cd03393 14 LGRYLGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSA--TFWGSLMLHVRK---------- 81 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHH--HHHHHHHHHHHH----------
Confidence 455666777888899999999999999976431 134578999999999764 333333222221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 129 SYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 129 ~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
.....+...+++++++||+|+|+||++||++|+++|..++++
T Consensus 82 ----~~~~~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 123 (125)
T cd03393 82 ----KWFTLIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVL 123 (125)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 112345566788999999999999999999999999877765
No 19
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.87 E-value=4.1e-21 Score=155.81 Aligned_cols=114 Identities=20% Similarity=0.259 Sum_probs=78.1
Q ss_pred HHHHhhhHHH-HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC--CccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcC
Q psy17816 46 LILFRRDLHT-VTFFVGLILNEMINMTLKYIIQEPRPARDHI--DKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNN 122 (235)
Q Consensus 46 ~~~~~r~~~~-~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~--~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~ 122 (235)
..+.+|+++. ..++.+.+.+.+++..+|..++|+||..... .....++|||||||+.++++ +.. +..+..
T Consensus 69 ~~l~~~d~~g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~--a~~--l~~~~~--- 141 (190)
T PRK09597 69 IPLIQRDAIGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLA--VAF--LMRRYS--- 141 (190)
T ss_pred HHHHhccHhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHH--HHH--HHHHHc---
Confidence 3345556665 4555678889999999999999987754321 12234599999999976333 222 121111
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHH
Q psy17816 123 STYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWF 176 (235)
Q Consensus 123 ~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~ 176 (235)
++.. ...+.++++|++||||+|+|||+||++|+++|++++.++.
T Consensus 142 --------~~~~--~~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~lf~ 185 (190)
T PRK09597 142 --------FKKY--WWLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSLFT 185 (190)
T ss_pred --------hhHH--HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111 1223566789999999999999999999999998887654
No 20
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.87 E-value=2.7e-21 Score=163.31 Aligned_cols=126 Identities=19% Similarity=0.226 Sum_probs=85.6
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC-------------C----CccCCCCCCCChhHHHHHHHHHHH
Q psy17816 48 LFRRDLHTVTFFVGLILNEMINMTLKYIIQEPRPARDH-------------I----DKVSVPYGMPSSHAQFMWFFSTYI 110 (235)
Q Consensus 48 ~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~-------------~----~~~~~~~sfPSgHa~~~~~~a~~~ 110 (235)
..+|+.... ++...+++..+|.++|.+++|+||+... . ..|++++||||||++.+ ++++.
T Consensus 11 ~~~~~~g~~-l~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a--~a~~~ 87 (235)
T cd03381 11 HLSQSVGIK-LLWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGT--TAVLL 87 (235)
T ss_pred hcchHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHH--HHHHH
Confidence 345554433 3444445555899999999999997520 0 13578999999999854 55555
Q ss_pred HHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 111 LCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
++......... .+..++..|.....+...+.++|++||+|+|+|||+||++|+++|+.++......
T Consensus 88 ~l~~~l~~~~~--~r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~~ 153 (235)
T cd03381 88 VMVTALLSHLA--GRKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSHI 153 (235)
T ss_pred HHHHHHHHHhh--ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 54433211110 0001334566667777788899999999999999999999999999887755443
No 21
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.86 E-value=2.3e-21 Score=145.22 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDHIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFI 135 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~ 135 (235)
..++.+.+++..++..+|..++||||+... ..++||||||++.+++++.+ +....+ .+ ..
T Consensus 6 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~----~~~~sfPSgHa~~a~~~~~~--~~~~~~----------~~----~~ 65 (106)
T cd03394 6 LILAEAAALTAAVTEGLKFAVGRARPDGSN----NGYRSFPSGHTASAFAAATF--LQYRYG----------WR----WY 65 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCccCcHHHHHHHHHHHH--HHHHHc----------ch----HH
Confidence 455667788889999999999999998643 47899999999976444333 221111 11 12
Q ss_pred HHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 136 VLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 136 ~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
......+++++++||+|+|+||++||++|+++|.+++.+
T Consensus 66 ~~~~~~~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~ 104 (106)
T cd03394 66 GIPAYALASLVGASRVVANRHWLSDVLAGAAIGILVGYL 104 (106)
T ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHheee
Confidence 344566788999999999999999999999999887654
No 22
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.84 E-value=1.8e-19 Score=149.26 Aligned_cols=112 Identities=17% Similarity=0.232 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC---------------CCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhh
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH---------------IDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRY 120 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~---------------~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~ 120 (235)
+.+..++.++.+++.++|..++|+||.... ...++.++||||||++.+ ++.+...++..++
T Consensus 70 ~~~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~a--f~~~~~~~~~~~~-- 145 (197)
T cd03396 70 LLLILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAG--FALLALYFLFRRR-- 145 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHH--HHHHHHHHHHHHh--
Confidence 455566667888899999999999997521 123457899999999976 4433333333221
Q ss_pred cCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 121 NNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 121 ~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
++.+|.....+.+.+++++++||+|.|.|++|||++|+++|.+++.+.|.+
T Consensus 146 -------~~~~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~~ 196 (197)
T cd03396 146 -------RPRLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYRL 196 (197)
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 123455556667788999999999999999999999999999888877653
No 23
>KOG3030|consensus
Probab=99.83 E-value=2.8e-19 Score=156.50 Aligned_cols=119 Identities=20% Similarity=0.360 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC-----CC---------------cc---------CCCCCCCChhHHHHHHH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH-----ID---------------KV---------SVPYGMPSSHAQFMWFF 106 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~-----~~---------------~~---------~~~~sfPSgHa~~~~~~ 106 (235)
..+++|.+++.+++.++|..+||+||+... .. .| +...|||||||+++++.
T Consensus 113 ~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~ 192 (317)
T KOG3030|consen 113 GVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYA 192 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHH
Confidence 566778889999999999999999996521 10 11 22359999999988888
Q ss_pred HHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHH
Q psy17816 107 STYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 107 a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l 178 (235)
+.|+.+++..+..... ..+.+|..+.++.+.+|++||+|||-++.|+++||++|+++|+++|+..+..
T Consensus 193 ~~flalyl~~~~~~~~----~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~ 260 (317)
T KOG3030|consen 193 MGFLALYLQARLFWFG----RGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRY 260 (317)
T ss_pred HHHHHHHHHHHHhcCC----CchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhh
Confidence 8787766665544321 3678899999999999999999999999999999999999999888775544
No 24
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.81 E-value=3.8e-19 Score=134.89 Aligned_cols=104 Identities=23% Similarity=0.454 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC----------CCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccch
Q psy17816 60 VGLILNEMINMTLKYIIQEPRPARDH----------IDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYES 129 (235)
Q Consensus 60 ~~~~~~~~l~~~lK~~i~rpRP~~~~----------~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 129 (235)
.+.+.+..++.++|..++|+||+... ......++||||||++.+++++.++. ...+.+. .
T Consensus 2 ~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~--~~~~~~~-------~- 71 (116)
T smart00014 2 LLAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLL--LYLPARA-------A- 71 (116)
T ss_pred hHHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHH--HHHHHHh-------h-
Confidence 35677889999999999999997521 12346789999999997755554433 3332221 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHH
Q psy17816 130 YWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGW 175 (235)
Q Consensus 130 ~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~ 175 (235)
+.......+.++.+++.||+|+|.|+++||++|+++|..++..+
T Consensus 72 --~~~~~~~~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~~ 115 (116)
T smart00014 72 --RKLLIILLLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAVL 115 (116)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHc
Confidence 22245567788999999999999999999999999998887653
No 25
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.74 E-value=9.8e-17 Score=132.29 Aligned_cols=118 Identities=23% Similarity=0.308 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhCCCCCCCCC-CCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhH
Q psy17816 55 TVTFFVGLILNEMINMTLKY--IIQEPRPARDH-IDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYW 131 (235)
Q Consensus 55 ~~~~~~~~~~~~~l~~~lK~--~i~rpRP~~~~-~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 131 (235)
..............+..+|. .+.+|||.... ......++||||||++.+++++.++......+.. .. .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfPSgHt~~~~~~~~~l~~~~~~~~~--------~~-~ 163 (232)
T COG0671 93 ALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVALVLGASGYSFPSGHAAGAAAAALLLALLLPLRRA--------LL-R 163 (232)
T ss_pred HHHHHHHhHHHHHHHHHHhccccccCCCCcchhccccCcccCCCCChhHHHHHHHHHHHHHHHHHHHh--------hh-h
Confidence 34555566667788889997 89999996532 1122478999999999775555444433332221 01 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy17816 132 KGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQL 181 (235)
Q Consensus 132 r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~~ 181 (235)
+.....++..++.++++||+|+|+||++||++|.++|.+++.++......
T Consensus 164 ~~~~~~~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~ 213 (232)
T COG0671 164 RVLLLILLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRP 213 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhc
Confidence 55566788899999999999999999999999999999888887766654
No 26
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.73 E-value=1.4e-16 Score=120.20 Aligned_cols=105 Identities=27% Similarity=0.396 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCC--------CccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchh
Q psy17816 59 FVGLILNEMINMTLKYIIQEPRPARDHI--------DKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESY 130 (235)
Q Consensus 59 ~~~~~~~~~l~~~lK~~i~rpRP~~~~~--------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 130 (235)
......+..++..+|..++++||..... ..+..++||||||++.+.+++.+ +....+.+ .
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~--l~~~~~~~----------~ 76 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALF--LALLLPRR----------L 76 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHH--HHHHHHHH----------H
Confidence 3444455567899999999999986421 12457899999999977444433 33332211 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHH
Q psy17816 131 WKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGW 175 (235)
Q Consensus 131 ~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~ 175 (235)
.+.........++..+++||+++|.||++|+++|.++|..++..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 77 LRLLLGLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 223356678889999999999999999999999999998877653
No 27
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.71 E-value=9.2e-18 Score=128.68 Aligned_cols=114 Identities=25% Similarity=0.411 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC----c-----cCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDHID----K-----VSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYK 126 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~----~-----~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~ 126 (235)
+.++.+++++..++.++|..+++|||.....+ . ...++||||||++.+++++ ..+....+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~--~~l~~~~~~~~------ 74 (129)
T PF01569_consen 3 LALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFA--FFLAYYLGSRG------ 74 (129)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHH--HHHHHHCCCCH------
T ss_pred cccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHH--hhhhhhhhccc------
Confidence 44566777788889999999999999753210 0 0125799999999664443 33333322110
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 127 YESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 127 ~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
..+.........++.++++||+|+|.||++|+++|+++|..++.++.....
T Consensus 75 ---~~~~~~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~ 125 (129)
T PF01569_consen 75 ---WIRILLFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYK 125 (129)
T ss_dssp ---HHSEEHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCH
T ss_pred ---cccchhhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhc
Confidence 000124556778899999999999999999999999999888877655443
No 28
>KOG2822|consensus
Probab=99.65 E-value=1e-15 Score=134.05 Aligned_cols=159 Identities=20% Similarity=0.179 Sum_probs=109.6
Q ss_pred eecCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC------ccC
Q psy17816 17 VEYPKGDLVGKFLALLSLTPFGVLIGFVTLILFRRDLHTVTFFVGLILNEMINMTLKYIIQEPRPARDHID------KVS 90 (235)
Q Consensus 17 v~y~~~d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~~~------~~~ 90 (235)
++.+..|.++...+.++.-++++++ +..++|......+--+..-.+.+..+.+.+|..+.-|||...++. ...
T Consensus 76 ~rn~fld~yF~yts~lGsh~FYilf-LP~~~W~g~~~ltrdm~~i~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~ 154 (407)
T KOG2822|consen 76 VRNPFLDVYFSYTSLLGSHVFYILF-LPFPFWNGDPYLTRDMTYIWVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTT 154 (407)
T ss_pred hcCchHHhhhhhhhhhcchhhheee-hhhHHhcCChhHhhHHHHHHHHHHHHhhhhhheeecCCCCCCCeEEEEeccchh
Confidence 4456677777777777766666543 222333221111222223334456778899999999999877632 245
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHH
Q psy17816 91 VPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSI 170 (235)
Q Consensus 91 ~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~ 170 (235)
.+|||||.||+++++.+.+..+.+. .... .....+..+..+.+++..+++++|+|.|+|..-|+++|.++|++
T Consensus 155 ~EYG~PStHt~natais~~~~~~ls-~~d~------~s~p~~~lgl~lv~~y~~lv~lgRiY~GMHgvlDi~sG~ligvl 227 (407)
T KOG2822|consen 155 KEYGMPSTHTMNATAISFYFFLVLS-TMDR------ESYPIQYLGLSLVLLYYALVCLGRIYCGMHGVLDIVSGLLIGVL 227 (407)
T ss_pred hhhCCCcchhhhhhHHHHHHHHHHH-Hhch------hhhHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHhhhHHHHH
Confidence 7899999999999877777532222 2111 12222445666777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q psy17816 171 LGTGWFIVTQLFL 183 (235)
Q Consensus 171 ~~~~~~~l~~~~~ 183 (235)
+..+++.+..++-
T Consensus 228 ~~~~~~~~~~~~d 240 (407)
T KOG2822|consen 228 ILILRYPFVDFID 240 (407)
T ss_pred HhhhhhhHHHhcc
Confidence 9999998887665
No 29
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.62 E-value=6.6e-15 Score=122.94 Aligned_cols=91 Identities=20% Similarity=0.150 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhhCCCCCCCCC---C---C----ccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHH
Q psy17816 65 NEMINMTLKYIIQEPRPARDH---I---D----KVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGF 134 (235)
Q Consensus 65 ~~~l~~~lK~~i~rpRP~~~~---~---~----~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~ 134 (235)
+.+++..+|..++|+||.... . . .....+||||||+++++++ ..++..++..+
T Consensus 105 a~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~--a~~l~~~~~~~--------------- 167 (209)
T cd03380 105 AGIATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAA--ALVLAELFPER--------------- 167 (209)
T ss_pred HHHHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHH--HHHHHHHHHHH---------------
Confidence 455689999999999997643 1 1 2346789999999976444 44444443321
Q ss_pred HHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHH
Q psy17816 135 IVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGT 173 (235)
Q Consensus 135 ~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~ 173 (235)
...+..++..++.||||.|+||++||++|..+|..++.
T Consensus 168 -~~~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~ 205 (209)
T cd03380 168 -AAELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAA 205 (209)
T ss_pred -HHHHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHH
Confidence 11234678899999999999999999999999987764
No 30
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.60 E-value=1.7e-14 Score=122.40 Aligned_cols=87 Identities=20% Similarity=0.122 Sum_probs=62.4
Q ss_pred HHHHHHHhhCCCCCCCCCC-----C----ccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHH
Q psy17816 68 INMTLKYIIQEPRPARDHI-----D----KVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLS 138 (235)
Q Consensus 68 l~~~lK~~i~rpRP~~~~~-----~----~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~ 138 (235)
.+..+|..++|+||+.... . .....+||||||++.+++.+ .++..+.+.+. ..
T Consensus 116 ~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a--~~La~~~p~~~----------------~~ 177 (232)
T cd03397 116 ATYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWA--LILAELVPERA----------------DE 177 (232)
T ss_pred HHHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHH--HHHHHHHHHHH----------------HH
Confidence 3789999999999986320 0 13457899999999764443 33333333221 12
Q ss_pred HHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHH
Q psy17816 139 SLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILG 172 (235)
Q Consensus 139 ~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~ 172 (235)
++..+..+|.||||.|+||++||++|.++|..+.
T Consensus 178 l~~~a~~~g~SRv~~GvH~psDV~aG~~lG~~~~ 211 (232)
T cd03397 178 ILARGSEYGQSRIVCGVHWPSDVMGGRIMAAALV 211 (232)
T ss_pred HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 3455778999999999999999999999997553
No 31
>KOG4268|consensus
Probab=99.58 E-value=1.8e-14 Score=112.05 Aligned_cols=105 Identities=26% Similarity=0.363 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCC---CCc-cCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhH
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARDH---IDK-VSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYW 131 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~~---~~~-~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 131 (235)
+.+.+|...-.....+.|.+++|.||.... .+. .-+-|||||||++-++..+-+...-... .
T Consensus 67 v~llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~--------------a 132 (189)
T KOG4268|consen 67 VNLLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVL--------------A 132 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHh--------------c
Confidence 556678888888889999999999998642 111 1256999999999775444322111110 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 132 KGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 132 r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
-....+..+.|+.+||.|||-+|.|+.+||++|+.+|.+-+-+
T Consensus 133 ~Plyv~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl 175 (189)
T KOG4268|consen 133 VPLYVLLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARL 175 (189)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1113445788999999999999999999999999999655443
No 32
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.44 E-value=6.9e-13 Score=112.54 Aligned_cols=106 Identities=19% Similarity=0.144 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhCCCCCCCC-------------------CCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy17816 65 NEMINMTLKYIIQEPRPARD-------------------HIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTY 125 (235)
Q Consensus 65 ~~~l~~~lK~~i~rpRP~~~-------------------~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~ 125 (235)
+.++++..|..++++||... +........||||||++++ ++.+.++..++.........
T Consensus 98 a~ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a--~a~a~vL~~~~~~~~~~~~~ 175 (232)
T cd03398 98 AGIAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFA--GAAATVLKALFGSDKVPDTV 175 (232)
T ss_pred HHHHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHH--HHHHHHHHHHhCCCCCCCCc
Confidence 44668899999999999642 1112245789999999976 44444454443321100000
Q ss_pred -------ccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 126 -------KYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 126 -------~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
......+ ....+..++..++.||||.|+||++||++|..+|..++-.
T Consensus 176 ~~~~~~~~~~~~~~--~~~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~ 229 (232)
T cd03398 176 SEPDEGGPSTGVTR--VWAELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAA 229 (232)
T ss_pred cccccCCCCCCCcc--cHhHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHH
Confidence 0000011 1233455678999999999999999999999999877654
No 33
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.40 E-value=2.8e-11 Score=99.27 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=46.9
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHH
Q psy17816 91 VPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSI 170 (235)
Q Consensus 91 ~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~ 170 (235)
..++|||+|+..+ +.....+... . ++ ....+..++++++++||+|+|.|++.||++|.++|.+
T Consensus 115 ~~~~fPS~H~~~a--~~~~~~~~~~--~---------~~----~~~~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~~ 177 (186)
T cd03386 115 PFNAFPSLHVAWA--VLAALFLWRH--R---------RR----LLRWLAVLWPLLIWLSTLYLGNHYFIDLVGGIALALL 177 (186)
T ss_pred CcceeCcHHHHHH--HHHHHHHHHH--H---------HH----HHHHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHHH
Confidence 4679999999965 3322222111 1 01 1345667788899999999999999999999999965
Q ss_pred HHH
Q psy17816 171 LGT 173 (235)
Q Consensus 171 ~~~ 173 (235)
+..
T Consensus 178 ~~~ 180 (186)
T cd03386 178 SFY 180 (186)
T ss_pred HHH
Confidence 543
No 34
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=98.90 E-value=3.1e-09 Score=82.70 Aligned_cols=97 Identities=21% Similarity=0.233 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHH
Q psy17816 60 VGLILNEMINMTLKYIIQEPRPARDHIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSS 139 (235)
Q Consensus 60 ~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~ 139 (235)
.+.+++.++.+++|.++..-+--..+....-..-||||+|++++.++++.+.+..- . ......++
T Consensus 8 ~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G----~-----------~S~~FAia 72 (141)
T PF02681_consen 8 IAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEG----F-----------DSPLFAIA 72 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhC----C-----------CCcHHHHH
Confidence 34445556666666665421111111112235679999999988776665443211 1 11144556
Q ss_pred HHHHHHHHH-------------------------------------HhhccCCCChhHHHHHHHHHHHHH
Q psy17816 140 LLLTCIVSY-------------------------------------SRIYLLYHTWNQILYGAIIGSILG 172 (235)
Q Consensus 140 ~~~a~lv~~-------------------------------------SRvylg~H~~sDVl~G~~iG~~~~ 172 (235)
+++++.|.+ -|-.+| |+|.||++|+++|++++
T Consensus 73 ~v~a~IVmyDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lG-Htp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 73 AVFALIVMYDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLG-HTPLEVFAGALLGIVVA 141 (141)
T ss_pred HHHHHhheeehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCC-CCHHHHHHHHHHHHhhC
Confidence 666666655 233455 99999999999998764
No 35
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.83 E-value=3.1e-08 Score=76.31 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccchhHHHHHHHHH
Q psy17816 60 VGLILNEMINMTLKYIIQEPRPARDHIDKVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYKYESYWKGFIVLSS 139 (235)
Q Consensus 60 ~~~~~~~~l~~~lK~~i~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~ 139 (235)
.+.+++.+..+++|..+.--|-...+..-....-||||+|++...++++.+.+-.- ++. -...++
T Consensus 14 lsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G-----------~dS----~lFaiA 78 (153)
T COG1963 14 LSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEG-----------LDS----PLFAIA 78 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhc-----------CCC----chHHHH
Confidence 34455556667777766432221111112335679999999977666554432111 111 133444
Q ss_pred HHHHHHHHH----------------------------------HhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 140 LLLTCIVSY----------------------------------SRIYLLYHTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 140 ~~~a~lv~~----------------------------------SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
.+.++.|.+ -|..+| |+|.+|++|.++|++++++.+.+.
T Consensus 79 ~vfaiIvm~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellG-H~p~eV~~G~~lGI~i~~i~~~~~ 151 (153)
T COG1963 79 AVFAIIVMYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLG-HTPLEVFAGLLLGILIAWIFYAFF 151 (153)
T ss_pred HHHHHHHhhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhC-CChHHHHHHHHHHHHHHHHHHHHh
Confidence 445555543 244556 999999999999999998877653
No 36
>PF14378 PAP2_3: PAP2 superfamily
Probab=98.44 E-value=1.3e-05 Score=65.83 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHH
Q psy17816 136 VLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSIL 171 (235)
Q Consensus 136 ~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~ 171 (235)
..+..++.+++.+|-++.|.|+.-|+++|.+++.++
T Consensus 153 ~~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 153 RALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLA 188 (191)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 446677889999999999999999999999999654
No 37
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=98.15 E-value=7.9e-05 Score=60.91 Aligned_cols=113 Identities=18% Similarity=0.133 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCC-------C----CC----ccCCCCCCCChhHHHHHHHHHHHHHHHHHHHhh
Q psy17816 56 VTFFVGLILNEMINMTLKYIIQEPRPARD-------H----ID----KVSVPYGMPSSHAQFMWFFSTYILCFVVVRLRY 120 (235)
Q Consensus 56 ~~~~~~~~~~~~l~~~lK~~i~rpRP~~~-------~----~~----~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~ 120 (235)
.+.+.++.++..+...+|.+.+...|-+. + .+ ....+..||-||++.. ++.....+.. +.
T Consensus 110 ayvf~~~~L~~s~i~~lKalta~~CPWdLv~yGG~~~~~~L~~~rpp~~~pGhCfPgGHASsG--fa~~aLfFa~-~~-- 184 (249)
T COG3907 110 AYVFVTLVLSTSLISLLKALTAMDCPWDLVRYGGGFPFIGLFESRPPLKAPGHCFPGGHASSG--FAWVALFFAA-WG-- 184 (249)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHhCCCCcceEeecCCCCCCCCCCcCCCCCcccc--HHHHHHHHHH-cc--
Confidence 56667778888899999999988888431 0 11 1235678999999954 4433322222 21
Q ss_pred cCCccccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 121 NNSTYKYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 121 ~~~~~~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
..+.++.....+.+....+.++||+-.|.|+.|.-+....+-.+++...|++.
T Consensus 185 ------~~Prla~l~l~~g~~~G~l~g~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l~ 237 (249)
T COG3907 185 ------VCPRLAWLGLMIGLVAGLLFGISQQLRGAHFLSHNLWSLTICWLVALGFFYLF 237 (249)
T ss_pred ------cChHHHHHHHHHHHHHHHHHhHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHh
Confidence 23556666677778889999999999999999999999888888888777665
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=96.47 E-value=0.016 Score=40.34 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHH
Q psy17816 131 WKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSIL 171 (235)
Q Consensus 131 ~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~ 171 (235)
.|.......+....++-.+| .|+--||+.|..+...+
T Consensus 32 ~~~~~~~~~~~~~~~ii~sr----~HYTvDV~~a~~it~~~ 68 (74)
T PF14360_consen 32 LKVIMWLLAIIGSFLIIASR----KHYTVDVVLAYYITSLV 68 (74)
T ss_pred HHHHHHHHHHHHHHHHHHcC----CCceeehhhHHHHHHHH
Confidence 34444444444455555555 89999999999988543
No 39
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=83.37 E-value=4.4 Score=34.51 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=21.1
Q ss_pred HHHHHHHHhhccCCCChhHHHHHHHHHHHHHH
Q psy17816 142 LTCIVSYSRIYLLYHTWNQILYGAIIGSILGT 173 (235)
Q Consensus 142 ~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~ 173 (235)
+-.....+-+| .|++.+=+.|.++|.++.+
T Consensus 206 W~~mll~T~iy--FHT~~EKl~Gl~~g~~~~~ 235 (238)
T PF10261_consen 206 WWWMLLMTSIY--FHTILEKLSGLLFGYLGWY 235 (238)
T ss_pred HHHHHHHHHHH--HCCHHHHHHHHHHHHHhhe
Confidence 33334445554 8999999999999976543
No 40
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=77.61 E-value=31 Score=26.84 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCC---CCccCCCCCCCChhHH
Q psy17816 62 LILNEMINMTLKYIIQEPRPARDH---IDKVSVPYGMPSSHAQ 101 (235)
Q Consensus 62 ~~~~~~l~~~lK~~i~rpRP~~~~---~~~~~~~~sfPSgHa~ 101 (235)
.+++..+...-|++ .+||.+.+ +++...++||-|-||-
T Consensus 49 ~mig~yl~~~~rr~--~~rPED~~daEI~dgAGe~GfFsP~Sw 89 (137)
T PF12270_consen 49 LMIGFYLRFTARRI--GPRPEDREDAEIADGAGELGFFSPHSW 89 (137)
T ss_pred HHHHHHHHHHHhhC--CCCCccccccccccCCCCcCcCCCccH
Confidence 34455555555555 68997654 4455678999999986
No 41
>TIGR03546 conserved hypothetical protein TIGR03546. Members of this family are uncharacterized proteins, usually encoded by a gene adjacent to a member of family TIGR03545, which is also uncharacterized.
Probab=58.58 E-value=17 Score=28.91 Aligned_cols=39 Identities=15% Similarity=0.447 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----chhhhhhhhhhhhhh
Q psy17816 161 ILYGAIIGSILGTGWFIVTQLFLS----PLFPLITQWRISEML 199 (235)
Q Consensus 161 Vl~G~~iG~~~~~~~~~l~~~~~~----~~~~~~~~w~~~~~~ 199 (235)
+++|.++|++.+...|.++..+.+ ...+|+-++++.+.+
T Consensus 110 ~~Gg~l~Gli~~~~~Y~ls~~lI~~Yr~~~~~~~~~~~~~~~l 152 (154)
T TIGR03546 110 VMGSFVVGLILLPPAFAISKVIIAKYRKRIVAWVNKFKIVKLL 152 (154)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 889999999999998888876644 345555555555543
No 42
>PF12084 DUF3561: Protein of unknown function (DUF3561); InterPro: IPR022721 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=57.66 E-value=76 Score=23.51 Aligned_cols=85 Identities=14% Similarity=0.281 Sum_probs=46.9
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc-cchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHH
Q psy17816 90 SVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTYK-YESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIG 168 (235)
Q Consensus 90 ~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG 168 (235)
+..+|+|-|-+-+......+.+-++.+.. |.-. .-..|...+....+.+.+-++.+...-|.-..+-...|..+|
T Consensus 20 e~t~sl~G~v~GF~~~wLAlaiPfl~YG~----nTLfFfLYTWPFFLALmPvsVl~Gi~l~~ll~g~l~~s~~~t~l~V~ 95 (107)
T PF12084_consen 20 EPTWSLPGGVVGFVFWWLALAIPFLVYGS----NTLFFFLYTWPFFLALMPVSVLIGIALSSLLRGKLLWSLLATGLAVG 95 (107)
T ss_pred CCcccccchhHHHHHHHHHHhhHHhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEeeehhhHHHHHH
Confidence 46789998888765444433332322211 1000 112344444455555556667777777766666667777777
Q ss_pred HHHHHHHHHH
Q psy17816 169 SILGTGWFIV 178 (235)
Q Consensus 169 ~~~~~~~~~l 178 (235)
.+...++.++
T Consensus 96 ~lFwllF~~L 105 (107)
T PF12084_consen 96 CLFWLLFSWL 105 (107)
T ss_pred HHHHHHHHHH
Confidence 6665554433
No 43
>KOG3750|consensus
Probab=52.25 E-value=48 Score=28.73 Aligned_cols=26 Identities=27% Similarity=0.710 Sum_probs=18.4
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy17816 153 LLYHTWNQILYGAIIGSILGTGWFIVTQL 181 (235)
Q Consensus 153 lg~H~~sDVl~G~~iG~~~~~~~~~l~~~ 181 (235)
..+|...+=+.|.+.|++ .|+..+..
T Consensus 219 iYyH~~~ekVig~l~g~l---~W~~tY~~ 244 (270)
T KOG3750|consen 219 IYYHTLLEKVIGALTGLL---TWYFTYRF 244 (270)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHhheee
Confidence 457999999999999973 34444433
No 44
>KOG3058|consensus
Probab=48.42 E-value=23 Score=31.92 Aligned_cols=22 Identities=9% Similarity=-0.058 Sum_probs=15.7
Q ss_pred HHHhhccCCCChhHHHHHHHHH
Q psy17816 147 SYSRIYLLYHTWNQILYGAIIG 168 (235)
Q Consensus 147 ~~SRvylg~H~~sDVl~G~~iG 168 (235)
.+.=+.-+.||--||+.++-+-
T Consensus 249 i~~il~sr~HYTIDVvvAyyit 270 (351)
T KOG3058|consen 249 IFLILASRKHYTIDVVVAYYIT 270 (351)
T ss_pred HHHHHHhCCceeEEEEEehhhH
Confidence 3334445579999999998774
No 45
>PRK12848 ubiA 4-hydroxybenzoate octaprenyltransferase; Reviewed
Probab=46.32 E-value=1.9e+02 Score=24.90 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=21.7
Q ss_pred HHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 145 IVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 145 lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
...++ .-..++...+++.|...|...-..|....
T Consensus 124 ~~~Y~-~~Kr~~~~~~~~~g~~~g~~~~~g~~a~~ 157 (282)
T PRK12848 124 AWIYP-FMKRYTHLPQVVLGAAFGWGIPMAFAAVQ 157 (282)
T ss_pred HHHHH-hHHhcCcccHHHHHHHHHHHHHHHHHHHh
Confidence 34443 34556777899999988865545555444
No 46
>PRK10726 hypothetical protein; Provisional
Probab=45.20 E-value=1.2e+02 Score=22.31 Aligned_cols=85 Identities=9% Similarity=0.181 Sum_probs=45.4
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCcc-ccchhHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHH
Q psy17816 90 SVPYGMPSSHAQFMWFFSTYILCFVVVRLRYNNSTY-KYESYWKGFIVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIG 168 (235)
Q Consensus 90 ~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG 168 (235)
+..+|+|-|-+-+......+.+-++.... |.- ..-..|...+....+.+.+-|+++...-|.--.+=.+.|..++
T Consensus 17 e~s~sl~Gav~GFv~ywlA~aiPfl~YG~----nTlfF~LYTWPFFLALmPvsVlvGi~l~~Ll~g~l~~s~l~t~l~V~ 92 (105)
T PRK10726 17 ETTWSLPGAVVGFVSWLLALAIPFLIYGS----NTLFFFLYTWPFFLALMPVSVLVGIALHSLLRGKLLYSILFTLLTVG 92 (105)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 46789998887765444433332322211 100 0112334344444444555566677777766677777777777
Q ss_pred HHHHHHHHHH
Q psy17816 169 SILGTGWFIV 178 (235)
Q Consensus 169 ~~~~~~~~~l 178 (235)
.+...++..+
T Consensus 93 ~lFwllF~~L 102 (105)
T PRK10726 93 CLFWLLFSWL 102 (105)
T ss_pred HHHHHHHHHH
Confidence 6655554433
No 47
>TIGR01474 ubiA_proteo 4-hydroxybenzoate polyprenyl transferase, proteobacterial. A fairly deep split by both clustering (UPGMA) and phylogenetics (NJ tree) separates this group (mostly Proteobacterial and mitochondrial), with several characterized members, from another group (mostly archaeal and Gram-positive bacterial) lacking characterized members.
Probab=43.15 E-value=2.2e+02 Score=24.59 Aligned_cols=40 Identities=25% Similarity=0.399 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 140 LLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 140 ~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
..+.+.+.++ .-.......+++.|...|......|+....
T Consensus 117 ~~~~~~~~Y~-~~Kr~~~~~~~~~g~~~~~~~~~g~~a~~g 156 (281)
T TIGR01474 117 ASLALVATYP-FMKRITYWPQLVLGLAFGWGALMGWAAVTG 156 (281)
T ss_pred HHHHHHHHhc-hhcccccccHHHHHHHHHHHHHHHHHHHcC
Confidence 3444466677 355566778898888777655445554443
No 48
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=42.07 E-value=28 Score=26.57 Aligned_cols=19 Identities=26% Similarity=0.336 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy17816 161 ILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 161 Vl~G~~iG~~~~~~~~~l~ 179 (235)
+++|+++|+++|++...+.
T Consensus 2 ~~i~lvvG~iiG~~~~r~~ 20 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLT 20 (128)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 5788899988888766554
No 49
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=40.56 E-value=36 Score=23.43 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=22.2
Q ss_pred eecCCCChhHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy17816 17 VEYPKGDLVGKFLALL-SLTPFGVLIGFVTLILF 49 (235)
Q Consensus 17 v~y~~~d~~~~~~a~~-~l~p~~i~~~~~~~~~~ 49 (235)
++|-..|+.+++...+ .+.|++++.++++|-+.
T Consensus 12 v~~vAkdP~~Fl~~vll~LtPlfiisa~lSwkLa 45 (74)
T PF15086_consen 12 VEWVAKDPYEFLTTVLLILTPLFIISAVLSWKLA 45 (74)
T ss_pred HHHHHcChHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4555556665555443 77899988888887654
No 50
>PRK12870 ubiA 4-hydroxybenzoate polyprenyltransferase; Reviewed
Probab=37.27 E-value=2.8e+02 Score=24.12 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=18.6
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 153 LLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 153 lg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
.......|++.|...|...-..|...+.
T Consensus 135 KR~t~~~~~~lg~~~~~~~l~g~~a~~g 162 (290)
T PRK12870 135 KRVFPVPQLVLAIAWGFAVLISWSAVTG 162 (290)
T ss_pred hhccccceeeehHHHHhHHHHHHHHHcC
Confidence 4555667888888888765555554443
No 51
>PLN02809 4-hydroxybenzoate nonaprenyltransferase
Probab=35.54 E-value=3e+02 Score=23.99 Aligned_cols=39 Identities=21% Similarity=0.316 Sum_probs=24.5
Q ss_pred HHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 141 LLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 141 ~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
.+.....++- .....++.+++.|...|......|.....
T Consensus 123 ~~~~~~~Y~~-~KR~t~~~~~~lg~~~~~~~l~g~~av~g 161 (289)
T PLN02809 123 SLLLVFTYPL-MKRFTFWPQAFLGLTFNWGALLGWAAVKG 161 (289)
T ss_pred HHHHHHHHhH-HHhcCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 3334456663 55556688999888877666555655544
No 52
>PRK12895 ubiA prenyltransferase; Reviewed
Probab=35.47 E-value=3e+02 Score=24.01 Aligned_cols=38 Identities=24% Similarity=0.449 Sum_probs=26.4
Q ss_pred HHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 143 TCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 143 a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
..++.+.-.-...+++.|++.|...|...-..|..+..
T Consensus 116 ~~l~~~yp~~KR~t~~~~~~lG~~~g~~~l~g~~Av~g 153 (286)
T PRK12895 116 IFLFIIDPFLKRYTAWRHIYMGSIIGLGVLAGYLAVIP 153 (286)
T ss_pred HHHHHHHHHHHhCccccHHHHHHHHHhHHHHHHHHHcC
Confidence 33444555556678899999999999766666665543
No 53
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=33.41 E-value=1.7e+02 Score=22.55 Aligned_cols=40 Identities=5% Similarity=-0.029 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHH
Q psy17816 135 IVLSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTG 174 (235)
Q Consensus 135 ~~~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~ 174 (235)
+.+++.++++..+....+.+.....-|+.|.+.|++++++
T Consensus 87 vsv~~~~~~~~~~~~~~~~~~~~~~Rvllgl~~al~vlvA 126 (142)
T PF11712_consen 87 VSVFAVFFAGWYWAGYSFGGWSFPYRVLLGLFGALLVLVA 126 (142)
T ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Confidence 3334444444433333444566667777777777666554
No 54
>PF11808 DUF3329: Domain of unknown function (DUF3329); InterPro: IPR021766 This family of proteins are functionally uncharacterised. This family is only found in bacteria. ; GO: 0004673 protein histidine kinase activity
Probab=32.00 E-value=1.9e+02 Score=20.50 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=18.9
Q ss_pred hhhhhhhhcccCCcchh--hHHHH--HHhHHHHHhhhhh
Q psy17816 194 RISEMLMIRDTTLIPNI--LWFEY--THCRQETRARSRK 228 (235)
Q Consensus 194 ~~~~~~~~rd~~~~~~~--~~~~~--~~~~~~~~~~~~~ 228 (235)
+..+|+.-.+....|+. +|.|- +-+|.+.++|++|
T Consensus 50 rL~~WL~~~~~~~pP~~~G~W~~if~~Lyr~qrr~r~~~ 88 (90)
T PF11808_consen 50 RLERWLRNPRKDEPPEGSGIWGEIFDRLYRLQRRNRKRR 88 (90)
T ss_pred HHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHc
Confidence 45666666665556654 56554 3355555555444
No 55
>PRK14772 lipoprotein signal peptidase; Provisional
Probab=31.39 E-value=2.4e+02 Score=23.22 Aligned_cols=23 Identities=22% Similarity=0.465 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCC
Q psy17816 57 TFFVGLILNEMINMTLKYIIQEP 79 (235)
Q Consensus 57 ~~~~~~~~~~~l~~~lK~~i~rp 79 (235)
.+.++++++..+.+++-.+...|
T Consensus 109 ~~al~lIlgGAlGNliDRl~~~~ 131 (190)
T PRK14772 109 ALALGLLLGGALGNLTDRLFREP 131 (190)
T ss_pred HHHHHHHHHHHHHhHHHHHhccc
Confidence 34555666666666666655433
No 56
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=30.85 E-value=2.2e+02 Score=23.36 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 137 LSSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 137 ~~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
...+..+..+..-|+-.+ +.+.+++.|. +|..++...-..+
T Consensus 32 iaA~~~a~~~~v~RL~r~-~~~~~a~~gl-~gV~i~a~~A~~t 72 (187)
T PF11361_consen 32 IAALAVAVVIVVWRLVRR-ESVQPALSGL-FGVAISAAIAWRT 72 (187)
T ss_pred HHHHHHHHHHHHHHHHhc-CccHHHHHHH-HHHHHHHHHHHHH
Confidence 344455555566666665 4666664443 3555544443333
No 57
>cd00922 Cyt_c_Oxidase_IV Cytochrome c oxidase subunit IV. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit IV is the largest of the nuclear-encoded subunits. It binds ATP at the matrix side, leading to an allosteric inhibition of enzyme activity at high intramitochondrial ATP/ADP ratios. In mammals, subunit IV has a lung-specific isoform and a ubiquitously expressed isoform.
Probab=27.53 E-value=1e+02 Score=23.84 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=40.5
Q ss_pred HHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHhh-cchhh-hhhhhhhhhhhhhcccCCcc
Q psy17816 143 TCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQLFL-SPLFP-LITQWRISEMLMIRDTTLIP 208 (235)
Q Consensus 143 a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~~~~-~~~~~-~~~~w~~~~~~~~rd~~~~~ 208 (235)
++.--+.|.-.+.--..-|++|.++++.++.+.+.+.+... .+.-. .-.+|.-.+.-+++|....|
T Consensus 59 sfg~~~~e~~~~~~ewk~v~~~~~~~i~~s~~~~~~~r~~~~~~~P~T~t~Ewqea~~er~~~~~~NP 126 (136)
T cd00922 59 SFGETGPEMNAPTGEWKTVFGGVLAFIGITGVIFGLQRAFVYGPKPHTFTEEWQEAQLERMLDMKVNP 126 (136)
T ss_pred hhccccccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcCHHHHHHHHHHHHHhCCCC
Confidence 34445566654444567899999999988888877776554 32111 11366666666666654433
No 58
>PRK14783 lipoprotein signal peptidase; Provisional
Probab=27.15 E-value=3e+02 Score=22.46 Aligned_cols=20 Identities=10% Similarity=0.099 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy17816 57 TFFVGLILNEMINMTLKYII 76 (235)
Q Consensus 57 ~~~~~~~~~~~l~~~lK~~i 76 (235)
.+.++++++.++.+++-.++
T Consensus 97 ~~~l~lIlgGAlGNliDRi~ 116 (182)
T PRK14783 97 PWGWNLVMAGAFGNFLDKFF 116 (182)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 34455566666666666553
No 59
>PRK14788 lipoprotein signal peptidase; Provisional
Probab=26.99 E-value=1.7e+02 Score=24.32 Aligned_cols=10 Identities=40% Similarity=0.766 Sum_probs=7.3
Q ss_pred cceeeeecCC
Q psy17816 12 LTITYVEYPK 21 (235)
Q Consensus 12 ~~lt~v~y~~ 21 (235)
+++||++.+-
T Consensus 38 f~L~~v~N~G 47 (200)
T PRK14788 38 FKIHFVENPG 47 (200)
T ss_pred EEEEEEecCC
Confidence 8888887543
No 60
>KOG1519|consensus
Probab=26.76 E-value=38 Score=28.20 Aligned_cols=24 Identities=29% Similarity=0.652 Sum_probs=20.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 156 HTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 156 H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
|-..|-++|.++|+.++.++|-+.
T Consensus 210 hLv~DFiAG~LLGA~l~~~FFPi~ 233 (297)
T KOG1519|consen 210 HLVNDFIAGGLLGAMLGFLFFPIN 233 (297)
T ss_pred HHHHHHhhhhHHHHHHHHhhccHH
Confidence 556899999999999999887653
No 61
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.30 E-value=67 Score=24.04 Aligned_cols=16 Identities=19% Similarity=0.437 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHHHHH
Q psy17816 159 NQILYGAIIGSILGTG 174 (235)
Q Consensus 159 sDVl~G~~iG~~~~~~ 174 (235)
+|.++|.++|+.+|++
T Consensus 50 sefIsGilVGa~iG~l 65 (116)
T COG5336 50 SEFISGILVGAGIGWL 65 (116)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677777777666654
No 62
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=26.25 E-value=88 Score=24.40 Aligned_cols=22 Identities=23% Similarity=0.298 Sum_probs=18.8
Q ss_pred CCCChhHHHHHHHHHHHHHHHH
Q psy17816 154 LYHTWNQILYGAIIGSILGTGW 175 (235)
Q Consensus 154 g~H~~sDVl~G~~iG~~~~~~~ 175 (235)
..+...|.+.|+++|.++++..
T Consensus 85 ~~~~~~dlL~G~liGff~g~~~ 106 (140)
T PF13373_consen 85 NSGHNDDLLWGLLIGFFFGLFS 106 (140)
T ss_pred ccchHHHHHHHHHHHHHHHHHh
Confidence 4577899999999999888876
No 63
>PRK12847 ubiA 4-hydroxybenzoate polyprenyltransferase; Reviewed
Probab=26.09 E-value=4.2e+02 Score=22.75 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=21.0
Q ss_pred HHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy17816 144 CIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVT 179 (235)
Q Consensus 144 ~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~ 179 (235)
....++- ....+...++++|...|...-..|...+
T Consensus 126 ~~~~Y~~-~Kr~~~~~~~~~g~~~~~~~l~~~~a~~ 160 (285)
T PRK12847 126 LIVLYPL-MKRFFYWPQLFLGFTFNMGILMAFAAVQ 160 (285)
T ss_pred HHHhccc-cccCCcccHHHHHHHHHHHHHHHHHHHc
Confidence 3445552 4445667889988888865444444443
No 64
>PF01219 DAGK_prokar: Prokaryotic diacylglycerol kinase; InterPro: IPR000829 Diacylglycerol kinase (2.7.1.107 from EC) (DAGK) is an enzyme that catalyses the formation of phosphatidic acid from diacylglycerol and ATP, an important step in phospholipid biosynthesis. In bacteria DAGK is very small (13 to 15 kD) membrane protein which seems to contain three transmembrane domains []. The best conserved region, is a stretch of 12 residues which are located in a cytoplasmic loop between the second and third transmembrane domains.; GO: 0004143 diacylglycerol kinase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2KDC_B.
Probab=25.73 E-value=2.6e+02 Score=20.48 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Q psy17816 60 VGLILNEMINMTLKYIIQEPRPARDH 85 (235)
Q Consensus 60 ~~~~~~~~l~~~lK~~i~rpRP~~~~ 85 (235)
...+..|++|..+....++--|..++
T Consensus 50 ~~Vl~~EllNTAIE~~vD~v~~~~~~ 75 (104)
T PF01219_consen 50 FLVLIAELLNTAIERLVDLVSPEYHP 75 (104)
T ss_dssp HHHHHHHTHHHHHHHHHTT----S-T
T ss_pred HHHHHHHHHHHHHHHHHhHcchhhcH
Confidence 34456999999999999988876543
No 65
>COG4129 Predicted membrane protein [Function unknown]
Probab=25.49 E-value=61 Score=29.10 Aligned_cols=10 Identities=40% Similarity=0.720 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q psy17816 161 ILYGAIIGSI 170 (235)
Q Consensus 161 Vl~G~~iG~~ 170 (235)
-+.|.++|++
T Consensus 60 r~~g~~iG~~ 69 (332)
T COG4129 60 RLLGNALGAI 69 (332)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 66
>PRK11677 hypothetical protein; Provisional
Probab=23.85 E-value=80 Score=24.48 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy17816 161 ILYGAIIGSILGTGWFIV 178 (235)
Q Consensus 161 Vl~G~~iG~~~~~~~~~l 178 (235)
+++|+++|+++|++...+
T Consensus 6 a~i~livG~iiG~~~~R~ 23 (134)
T PRK11677 6 ALIGLVVGIIIGAVAMRF 23 (134)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 457777777777765544
No 67
>PRK12874 ubiA prenyltransferase; Reviewed
Probab=23.75 E-value=4.9e+02 Score=22.64 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy17816 141 LLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQ 180 (235)
Q Consensus 141 ~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~ 180 (235)
.+.....++- -.+++.+.|+++|...|...-..|..+.+
T Consensus 125 ~~~~~~~Y~~-~KR~t~~~~~~~g~~~~~~~l~G~~av~g 163 (291)
T PRK12874 125 FLIVLGGYSY-FKRFSSLAHLVLGLSLGLAPIAGVVAVLG 163 (291)
T ss_pred HHHHHHHHhh-hcccccccHHHHHHHHHHHHHHHHHHHcC
Confidence 3344556773 56667778999999988776666666543
No 68
>PF02936 COX4: Cytochrome c oxidase subunit IV; InterPro: IPR004203 Cytochrome c oxidase, a 13 sub-unit complex (1.9.3.1 from EC) is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit IV. The Dictyostelium discoideum (Slime mould) member of this family is called COX VI. The Saccharomyces cerevisiae protein YGX6_YEAST appears to be the yeast COX IV subunit.; GO: 0004129 cytochrome-c oxidase activity; PDB: 3ABK_Q 3AG1_Q 3ASN_Q 1OCZ_D 2EIN_Q 2OCC_D 2YBB_O 3AG3_D 1OCO_Q 1V55_Q ....
Probab=23.60 E-value=2.5e+02 Score=21.89 Aligned_cols=71 Identities=15% Similarity=0.257 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcchhhh-h-hhhhhhhhhhhcccCCcc
Q psy17816 138 SSLLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQLFLSPLFPL-I-TQWRISEMLMIRDTTLIP 208 (235)
Q Consensus 138 ~~~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~~~~~~~~~~-~-~~w~~~~~~~~rd~~~~~ 208 (235)
.+.-+++.--+.|.-.+--...-|++|.++++.++.+.+.+.+....|-.|. + -+|.-.+.=+++|....|
T Consensus 54 alY~isFg~~g~r~~~~~gewk~v~~~~~~~i~~s~~l~~~~r~~~~~~~P~T~~~Ew~ea~~~~m~~~~~nP 126 (142)
T PF02936_consen 54 ALYRISFGQTGPRMKAPTGEWKKVFGGVFIFIGFSVLLFIWQRSYVYPPLPHTFSKEWQEAQNERMLDMKVNP 126 (142)
T ss_dssp HHHHHH-SS-HHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-----GGGSHHHHHHHHHHHHHTTSST
T ss_pred HHHHhhhcCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHHcCCCC
Confidence 3444556666788777777778899999999999888888776544321121 1 356555555555554333
No 69
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=23.55 E-value=3.7e+02 Score=21.26 Aligned_cols=65 Identities=15% Similarity=0.260 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhc---------chhhhhhhhhhhhhhhhcccC
Q psy17816 140 LLLTCIVSYSRIYLLYHTWNQILYGAIIGSILGTGWFIVTQLFLS---------PLFPLITQWRISEMLMIRDTT 205 (235)
Q Consensus 140 ~~~a~lv~~SRvylg~H~~sDVl~G~~iG~~~~~~~~~l~~~~~~---------~~~~~~~~w~~~~~~~~rd~~ 205 (235)
+..+++++.-|.-+|.=++ -..-|..+|.+++-+.|..+++..- .+.--++..|+..++.=++..
T Consensus 48 ~~~Af~~sliR~~lg~Gt~-lAfPGsm~GA~laGllyr~~~k~~~a~lGEviGTGiIGal~sypva~~~~g~~~~ 121 (150)
T PF09512_consen 48 VAMAFITSLIRNLLGTGTL-LAFPGSMFGALLAGLLYRKTKKLWAAALGEVIGTGIIGALLSYPVAKLFMGKEAA 121 (150)
T ss_pred HHHHHHHHHHHHHhCCCCH-HHhccchHHHHHHHHHHHHhCcchHHHHHHHHhhHHHHHHHHHHHHHHHhCCchh
Confidence 4556788888999987654 3556778888877777777665331 234455777888888877653
No 70
>PRK14776 lipoprotein signal peptidase; Provisional
Probab=22.57 E-value=2.7e+02 Score=22.38 Aligned_cols=9 Identities=0% Similarity=-0.193 Sum_probs=6.5
Q ss_pred cceeeeecC
Q psy17816 12 LTITYVEYP 20 (235)
Q Consensus 12 ~~lt~v~y~ 20 (235)
++++|++.+
T Consensus 47 ~~l~~v~N~ 55 (170)
T PRK14776 47 FNWVHLWNT 55 (170)
T ss_pred EEEEEEEec
Confidence 888887553
No 71
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.40 E-value=29 Score=30.53 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy17816 23 DLVGKFLALLSLTPFGVLIGFVTLILFRRDLH 54 (235)
Q Consensus 23 d~~~~~~a~~~l~p~~i~~~~~~~~~~~r~~~ 54 (235)
|+-......++...+++++++++.++|||++.
T Consensus 46 d~t~~a~~vl~sfAvvliiIIiIImlF~RrLL 77 (381)
T PF05297_consen 46 DLTQGALTVLYSFAVVLIIIIIIIMLFKRRLL 77 (381)
T ss_dssp --------------------------------
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333444444444444555555666777754
No 72
>KOG4580|consensus
Probab=22.39 E-value=3.1e+02 Score=20.45 Aligned_cols=16 Identities=31% Similarity=0.497 Sum_probs=8.8
Q ss_pred eecCCCChhHHHHHHH
Q psy17816 17 VEYPKGDLVGKFLALL 32 (235)
Q Consensus 17 v~y~~~d~~~~~~a~~ 32 (235)
-.|+.+|..+.+.++.
T Consensus 36 ~l~n~~~~~g~~~a~v 51 (112)
T KOG4580|consen 36 ALYNSGDRLGILSAYV 51 (112)
T ss_pred HHHhHHHHHHHHHHHH
Confidence 3455566555555544
No 73
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=21.47 E-value=5.1e+02 Score=22.40 Aligned_cols=8 Identities=13% Similarity=0.601 Sum_probs=4.3
Q ss_pred CCChhHHH
Q psy17816 95 MPSSHAQF 102 (235)
Q Consensus 95 fPSgHa~~ 102 (235)
.|+.|.-+
T Consensus 8 ~~~er~k~ 15 (301)
T PF14362_consen 8 SPAERNKY 15 (301)
T ss_pred ChHHHHHH
Confidence 45555553
No 74
>COG1970 MscL Large-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]
Probab=21.13 E-value=1.5e+02 Score=22.86 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=28.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q psy17816 157 TWNQILYGAIIGSILGTGWFIVTQLFLSPLFPLI 190 (235)
Q Consensus 157 ~~sDVl~G~~iG~~~~~~~~~l~~~~~~~~~~~~ 190 (235)
..-|..+|.++|...+-+.-.++..+..|+...+
T Consensus 15 NVvDLAVgVIIGaAFg~IV~SlV~diImPlIg~~ 48 (130)
T COG1970 15 NVVDLAVGVIIGAAFGKIVTSLVNDIIMPLIGLL 48 (130)
T ss_pred ChhhHHHHHHhHHHHHHHHHHHHHHHHHhhhhhh
Confidence 5568999999999999998888888888776544
No 75
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=20.65 E-value=50 Score=26.75 Aligned_cols=26 Identities=31% Similarity=0.841 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhhhh
Q psy17816 165 AIIGSILGTGWFIVTQLFLSPLFPLI 190 (235)
Q Consensus 165 ~~iG~~~~~~~~~l~~~~~~~~~~~~ 190 (235)
.-.|++-|++|+.+.-.+..|++|-+
T Consensus 98 ~W~Gi~YG~~~W~ivF~~lnP~fp~~ 123 (173)
T PF11085_consen 98 PWPGILYGLAWWAIVFFVLNPIFPMI 123 (173)
T ss_pred cchHHHHHHHHHHHHHHHhcccccCC
Confidence 34445555778777778888877644
Done!