Query psy17819
Match_columns 272
No_of_seqs 107 out of 1180
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 23:49:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 2.1E-52 7.2E-57 357.0 26.4 258 13-271 3-274 (276)
2 1f89_A 32.5 kDa protein YLR351 100.0 1.9E-52 6.5E-57 359.9 25.7 261 10-270 7-289 (291)
3 3p8k_A Hydrolase, carbon-nitro 100.0 8.1E-52 2.8E-56 354.0 26.3 251 12-267 19-281 (281)
4 3hkx_A Amidase; alpha-beta-BET 100.0 1.7E-51 5.9E-56 352.3 18.9 253 10-269 17-282 (283)
5 3ivz_A Nitrilase; alpha-beta s 100.0 1.9E-50 6.6E-55 342.4 23.7 249 14-268 2-262 (262)
6 2e11_A Hydrolase; dimethylarse 100.0 4.5E-49 1.6E-53 334.7 21.5 248 13-267 3-265 (266)
7 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.7E-49 9.3E-54 358.5 19.8 262 7-270 9-289 (440)
8 2vhh_A CG3027-PA; hydrolase; 2 100.0 5.3E-48 1.8E-52 345.2 23.8 262 8-270 67-370 (405)
9 1uf5_A N-carbamyl-D-amino acid 100.0 5.6E-47 1.9E-51 327.6 23.9 257 13-272 3-303 (303)
10 3ilv_A Glutamine-dependent NAD 100.0 1.2E-43 4E-48 332.9 23.0 244 8-256 1-276 (634)
11 4f4h_A Glutamine dependent NAD 100.0 4.3E-43 1.5E-47 324.7 25.1 230 13-246 6-266 (565)
12 3n05_A NH(3)-dependent NAD(+) 100.0 3E-43 1E-47 328.6 23.3 235 10-248 1-263 (590)
13 2uxy_A Aliphatic amidase; nitr 100.0 7.4E-43 2.5E-47 305.9 24.4 237 12-257 11-272 (341)
14 2dyu_A Formamidase; AMIF, CEK, 100.0 1.6E-42 5.3E-47 303.1 26.1 238 13-259 13-274 (334)
15 3sdb_A Glutamine-dependent NAD 100.0 4.2E-41 1.4E-45 317.2 22.5 253 7-262 7-294 (680)
16 3hkx_A Amidase; alpha-beta-BET 84.1 5 0.00017 33.1 8.7 72 158-231 45-128 (283)
17 2vhh_A CG3027-PA; hydrolase; 2 80.9 6.8 0.00023 34.2 8.6 73 158-230 104-193 (405)
18 3p8k_A Hydrolase, carbon-nitro 80.5 3.7 0.00013 33.8 6.5 70 159-230 46-126 (281)
19 3obe_A Sugar phosphate isomera 77.9 9.1 0.00031 31.7 8.2 73 14-93 90-168 (305)
20 1f89_A 32.5 kDa protein YLR351 76.7 6.6 0.00023 32.3 7.0 73 158-231 35-125 (291)
21 3ivz_A Nitrilase; alpha-beta s 75.7 6.1 0.00021 32.0 6.4 70 158-231 26-110 (262)
22 2w1v_A Nitrilase-2, nitrilase 74.1 7.7 0.00026 31.7 6.6 71 158-230 27-108 (276)
23 1ems_A Nitfhit, NIT-fragIle hi 73.9 11 0.00038 33.1 8.0 74 158-231 38-124 (440)
24 2dyu_A Formamidase; AMIF, CEK, 72.6 15 0.0005 31.1 8.2 66 165-231 51-130 (334)
25 3ngf_A AP endonuclease, family 70.6 33 0.0011 27.4 9.7 76 14-94 62-150 (269)
26 1k77_A EC1530, hypothetical pr 69.0 40 0.0014 26.5 9.9 63 27-94 80-143 (260)
27 2uxy_A Aliphatic amidase; nitr 68.6 19 0.00064 30.5 8.0 66 165-231 50-131 (341)
28 1uf5_A N-carbamyl-D-amino acid 67.7 11 0.00038 31.1 6.3 72 158-230 30-122 (303)
29 2e11_A Hydrolase; dimethylarse 63.3 12 0.0004 30.3 5.5 63 164-229 33-105 (266)
30 3cqj_A L-ribulose-5-phosphate 62.3 20 0.00067 29.2 6.8 63 28-94 104-166 (295)
31 3tva_A Xylose isomerase domain 59.4 24 0.00083 28.5 6.8 62 27-94 97-158 (290)
32 3dx5_A Uncharacterized protein 58.2 53 0.0018 26.3 8.7 77 13-94 61-142 (286)
33 3l23_A Sugar phosphate isomera 57.7 62 0.0021 26.5 9.1 59 28-93 104-164 (303)
34 3p94_A GDSL-like lipase; serin 57.4 39 0.0013 25.2 7.4 77 14-92 75-159 (204)
35 3ayv_A Putative uncharacterize 54.4 37 0.0013 26.8 7.0 65 28-94 72-136 (254)
36 1nmo_A Hypothetical protein YB 53.2 46 0.0016 26.7 7.3 57 146-203 37-96 (247)
37 3rjt_A Lipolytic protein G-D-S 53.2 35 0.0012 25.6 6.5 59 27-91 112-171 (216)
38 3teb_A Endonuclease/exonucleas 52.3 20 0.00069 28.3 5.1 41 12-55 2-44 (266)
39 1vli_A Spore coat polysacchari 51.6 32 0.0011 29.8 6.4 68 26-94 38-120 (385)
40 4f1h_A Tyrosyl-DNA phosphodies 51.4 23 0.00078 27.1 5.2 39 13-54 3-43 (250)
41 2j6v_A UV endonuclease, UVDE; 48.8 45 0.0015 27.7 6.8 64 28-94 57-122 (301)
42 2wqp_A Polysialic acid capsule 48.1 12 0.00042 31.9 3.2 67 26-94 29-110 (349)
43 2yyb_A Hypothetical protein TT 47.5 56 0.0019 26.1 6.9 56 146-203 38-96 (242)
44 2hk0_A D-psicose 3-epimerase; 47.3 58 0.002 26.5 7.3 65 28-94 103-170 (309)
45 1iuq_A Glycerol-3-phosphate ac 46.8 33 0.0011 29.4 5.6 60 28-90 206-267 (367)
46 4fva_A 5'-tyrosyl-DNA phosphod 46.5 30 0.001 26.8 5.2 40 13-55 13-54 (256)
47 2ei9_A Non-LTR retrotransposon 45.9 22 0.00074 28.3 4.2 37 13-55 7-43 (240)
48 1vyb_A ORF2 contains A reverse 45.6 37 0.0013 26.0 5.6 41 13-57 7-47 (238)
49 1i60_A IOLI protein; beta barr 44.9 47 0.0016 26.3 6.3 76 14-94 60-142 (278)
50 4h41_A Putative alpha-L-fucosi 43.6 76 0.0026 26.9 7.4 66 31-96 53-121 (340)
51 3hp4_A GDSL-esterase; psychrot 42.8 76 0.0026 23.2 6.8 70 14-92 67-141 (185)
52 2qw5_A Xylose isomerase-like T 42.7 94 0.0032 25.6 8.0 65 28-94 105-183 (335)
53 4gz1_A Tyrosyl-DNA phosphodies 42.6 34 0.0012 26.4 5.0 39 13-54 9-49 (256)
54 3u0h_A Xylose isomerase domain 41.0 53 0.0018 26.1 6.0 76 14-94 61-141 (281)
55 2fyw_A Conserved hypothetical 40.9 1E+02 0.0035 24.9 7.6 57 146-203 40-100 (267)
56 2gx8_A NIF3-related protein; s 40.7 83 0.0028 27.3 7.3 57 146-203 66-126 (397)
57 2v2f_A Penicillin binding prot 40.7 16 0.00056 17.9 1.8 17 217-233 5-21 (26)
58 3cny_A Inositol catabolism pro 40.7 63 0.0022 26.0 6.5 65 27-93 85-159 (301)
59 3g91_A MTH0212, exodeoxyribonu 40.6 29 0.00098 27.6 4.2 42 10-57 1-42 (265)
60 3qc0_A Sugar isomerase; TIM ba 39.6 72 0.0025 25.2 6.6 64 28-94 79-142 (275)
61 3kws_A Putative sugar isomeras 39.5 94 0.0032 24.8 7.3 79 13-94 77-165 (287)
62 4hf7_A Putative acylhydrolase; 39.2 75 0.0026 24.1 6.4 76 15-92 80-164 (209)
63 2him_A L-asparaginase 1; hydro 37.9 1.5E+02 0.005 25.3 8.4 66 142-208 229-295 (358)
64 1k7c_A Rhamnogalacturonan acet 36.9 82 0.0028 24.5 6.4 58 30-92 110-167 (233)
65 2wlt_A L-asparaginase; hydrola 36.5 1.4E+02 0.0047 25.1 7.9 65 142-208 218-282 (332)
66 1wsa_A Asparaginase, asparagin 35.8 1.4E+02 0.0047 25.1 7.9 65 142-208 215-279 (330)
67 1o7j_A L-asparaginase; atomic 35.8 1.5E+02 0.0051 24.8 8.1 65 142-208 217-281 (327)
68 1ivn_A Thioesterase I; hydrola 35.4 1.1E+02 0.0039 22.4 6.8 70 14-92 63-137 (190)
69 2q02_A Putative cytoplasmic pr 34.4 1.6E+02 0.0054 23.1 7.9 72 14-94 65-139 (272)
70 1nns_A L-asparaginase II; amid 33.8 1.6E+02 0.0054 24.7 7.9 65 142-208 211-275 (326)
71 2zds_A Putative DNA-binding pr 33.6 93 0.0032 25.5 6.5 66 28-94 107-179 (340)
72 2nyd_A UPF0135 protein SA1388; 33.3 1.1E+02 0.0037 26.3 6.8 56 146-203 42-101 (370)
73 3nxk_A Cytoplasmic L-asparagin 33.0 1.4E+02 0.0047 25.2 7.4 65 142-208 220-285 (334)
74 3p6l_A Sugar phosphate isomera 31.4 1.1E+02 0.0037 24.0 6.4 58 14-94 77-134 (262)
75 3bdk_A D-mannonate dehydratase 31.2 1E+02 0.0034 26.6 6.3 41 14-54 78-126 (386)
76 3qxb_A Putative xylose isomera 30.5 85 0.0029 25.6 5.7 65 28-93 110-177 (316)
77 3vni_A Xylose isomerase domain 30.5 1.3E+02 0.0045 24.0 6.8 65 28-94 84-151 (294)
78 3ff4_A Uncharacterized protein 30.4 82 0.0028 22.1 4.8 43 31-94 68-110 (122)
79 3mil_A Isoamyl acetate-hydroly 30.2 1.1E+02 0.0038 23.2 6.1 75 13-92 72-167 (240)
80 2yv1_A Succinyl-COA ligase [AD 30.0 1E+02 0.0035 25.4 6.0 45 32-93 81-126 (294)
81 1agx_A Glutaminase-asparaginas 29.5 1.8E+02 0.0061 24.4 7.5 65 142-208 215-280 (331)
82 3lmz_A Putative sugar isomeras 29.3 84 0.0029 24.7 5.3 58 14-94 75-132 (257)
83 3g8r_A Probable spore coat pol 29.0 1.5E+02 0.0051 25.2 6.9 71 23-94 12-97 (350)
84 1xla_A D-xylose isomerase; iso 29.0 1.7E+02 0.0059 24.9 7.6 64 28-94 112-180 (394)
85 4e38_A Keto-hydroxyglutarate-a 28.8 63 0.0022 25.7 4.3 36 37-94 98-133 (232)
86 4h08_A Putative hydrolase; GDS 28.6 90 0.0031 23.2 5.2 77 14-92 75-157 (200)
87 1zq1_A Glutamyl-tRNA(Gln) amid 27.7 2.3E+02 0.0077 24.9 8.0 65 142-208 304-368 (438)
88 1oi7_A Succinyl-COA synthetase 26.6 1.3E+02 0.0046 24.5 6.1 46 32-94 75-121 (288)
89 2x7v_A Probable endonuclease 4 26.2 1.3E+02 0.0043 23.9 5.9 25 28-52 85-109 (287)
90 1geq_A Tryptophan synthase alp 26.0 1.2E+02 0.004 23.9 5.6 30 147-176 194-223 (248)
91 3rxy_A NIF3 protein; structura 25.9 1.6E+02 0.0055 24.0 6.2 40 36-96 211-250 (278)
92 3nav_A Tryptophan synthase alp 25.8 93 0.0032 25.4 4.9 32 146-177 210-241 (271)
93 3ewb_X 2-isopropylmalate synth 25.7 1.3E+02 0.0045 24.7 5.9 31 24-54 113-143 (293)
94 4a1f_A DNAB helicase, replicat 25.5 42 0.0014 28.4 2.9 66 31-99 140-207 (338)
95 1tz9_A Mannonate dehydratase; 25.5 2.9E+02 0.0099 23.1 8.3 39 14-52 69-115 (367)
96 3cpr_A Dihydrodipicolinate syn 25.4 1.1E+02 0.0039 25.2 5.5 57 30-99 96-153 (304)
97 2qul_A D-tagatose 3-epimerase; 25.2 57 0.0019 26.1 3.6 65 28-94 84-152 (290)
98 3mpr_A Putative endonuclease/e 25.1 1E+02 0.0034 24.9 5.1 21 35-55 33-53 (298)
99 3nvt_A 3-deoxy-D-arabino-heptu 25.1 1.6E+02 0.0054 25.4 6.5 57 30-94 154-212 (385)
100 4pga_A Glutaminase-asparaginas 24.3 2.4E+02 0.0081 23.7 7.3 64 142-208 221-286 (337)
101 2vc6_A MOSA, dihydrodipicolina 24.3 1.2E+02 0.0042 24.7 5.5 51 30-93 80-131 (292)
102 2d6f_A Glutamyl-tRNA(Gln) amid 24.1 2.3E+02 0.0079 24.8 7.4 65 142-208 301-365 (435)
103 2q0q_A ARYL esterase; SGNH hyd 23.7 2.1E+02 0.0071 21.2 6.6 73 14-91 84-179 (216)
104 1ass_A Thermosome; chaperonin, 23.7 1E+02 0.0034 22.8 4.4 81 13-94 21-120 (159)
105 2r91_A 2-keto-3-deoxy-(6-phosp 23.6 98 0.0034 25.3 4.7 51 30-93 75-127 (286)
106 1xky_A Dihydrodipicolinate syn 23.5 1.1E+02 0.0039 25.1 5.1 51 30-93 92-143 (301)
107 4gew_A 5'-tyrosyl-DNA phosphod 23.3 1E+02 0.0035 26.0 5.0 40 13-55 119-160 (362)
108 2voa_A AF_EXO, XTHA, exodeoxyr 23.2 84 0.0029 24.4 4.2 37 14-56 2-38 (257)
109 3daq_A DHDPS, dihydrodipicolin 23.1 88 0.003 25.7 4.4 55 30-98 82-138 (292)
110 2cvh_A DNA repair and recombin 22.9 1E+02 0.0035 23.2 4.6 50 45-96 105-154 (220)
111 2o14_A Hypothetical protein YX 22.8 2.4E+02 0.0084 23.8 7.3 74 15-92 232-313 (375)
112 3tn4_A Phosphotriesterase; lac 22.6 3.1E+02 0.011 23.2 7.8 53 27-95 78-130 (360)
113 3vnd_A TSA, tryptophan synthas 22.6 1.1E+02 0.0037 24.9 4.7 31 146-176 208-238 (267)
114 4a74_A DNA repair and recombin 22.5 1.2E+02 0.004 23.1 4.8 67 31-100 109-182 (231)
115 1wdu_A TRAS1 ORF2P; four-layer 22.3 95 0.0033 24.1 4.3 37 16-56 20-56 (245)
116 2r6a_A DNAB helicase, replicat 22.2 94 0.0032 27.2 4.6 66 32-99 299-365 (454)
117 3lab_A Putative KDPG (2-keto-3 22.1 94 0.0032 24.5 4.1 35 38-94 78-118 (217)
118 2yxg_A DHDPS, dihydrodipicolin 21.8 1.1E+02 0.0039 24.9 4.8 51 30-93 80-131 (289)
119 3d0c_A Dihydrodipicolinate syn 21.8 1.4E+02 0.0048 24.8 5.4 51 30-93 91-142 (314)
120 1vr6_A Phospho-2-dehydro-3-deo 21.6 1.8E+02 0.0062 24.7 6.0 61 28-99 116-180 (350)
121 2o3h_A DNA-(apurinic or apyrim 21.5 1.4E+02 0.0047 23.6 5.2 39 13-57 28-67 (285)
122 2yv2_A Succinyl-COA synthetase 21.4 1.4E+02 0.0047 24.6 5.2 44 33-93 83-127 (297)
123 3flu_A DHDPS, dihydrodipicolin 21.3 1.5E+02 0.0051 24.3 5.4 56 30-99 87-144 (297)
124 1rtt_A Conserved hypothetical 21.3 68 0.0023 24.1 3.1 42 8-51 1-42 (193)
125 3dmy_A Protein FDRA; predicted 21.2 1.5E+02 0.0052 26.4 5.7 46 32-94 47-92 (480)
126 3dci_A Arylesterase; SGNH_hydr 21.2 2.7E+02 0.0094 21.1 6.9 74 14-92 102-194 (232)
127 2nuw_A 2-keto-3-deoxygluconate 21.0 1.1E+02 0.0037 25.1 4.5 51 30-93 76-128 (288)
128 3tha_A Tryptophan synthase alp 21.0 1.2E+02 0.004 24.5 4.5 32 145-177 200-231 (252)
129 3fdb_A Beta C-S lyase, putativ 20.9 1.7E+02 0.0059 24.0 5.9 45 39-94 144-189 (377)
130 2q6t_A DNAB replication FORK h 20.8 97 0.0033 27.0 4.4 54 43-98 308-363 (444)
131 1zco_A 2-dehydro-3-deoxyphosph 20.8 3E+02 0.01 22.1 7.0 61 29-98 34-96 (262)
132 2eja_A URO-D, UPD, uroporphyri 20.8 1.6E+02 0.0056 24.4 5.7 33 37-69 184-216 (338)
133 2jc4_A Exodeoxyribonuclease II 20.6 1.1E+02 0.0038 23.5 4.4 22 36-57 17-38 (256)
134 1c7n_A Cystalysin; transferase 20.5 1.4E+02 0.0048 24.9 5.3 40 44-94 163-203 (399)
135 2rfg_A Dihydrodipicolinate syn 20.3 1.2E+02 0.0042 24.8 4.7 51 30-93 80-131 (297)
136 1qtw_A Endonuclease IV; DNA re 20.3 3.1E+02 0.011 21.4 7.9 25 28-52 85-109 (285)
137 3ign_A Diguanylate cyclase; gg 20.2 1.9E+02 0.0066 20.7 5.5 40 13-52 129-169 (177)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=2.1e-52 Score=357.03 Aligned_cols=258 Identities=58% Similarity=1.053 Sum_probs=232.4
Q ss_pred ccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEE
Q psy17819 13 SFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLV 92 (272)
Q Consensus 13 ~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv 92 (272)
+||||++|+++.++.+.|++++.+++++|++.++|||||||++++||.++++...++.++ ++..+.|.++|++++++++
T Consensus 3 ~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~-~~~~~~l~~~a~~~~~~iv 81 (276)
T 2w1v_A 3 TFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIP-GESTQKLSEVAKESSIYLI 81 (276)
T ss_dssp EEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSS-SHHHHHHHHHHHHHTSEEE
T ss_pred ccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCC-CHHHHHHHHHHHHcCeEEE
Confidence 699999999977999999999999999999999999999999999998877766666666 8899999999999999999
Q ss_pred EeeeeeccCCeeEEEEEE---------EcccCCC-----CCCccccccccccCCCCceEEeeCCceEEEEeecCCCChHH
Q psy17819 93 GGSIPELDNDKVYNAATV---------HLFDIAI-----PGGITFKESDVLSPGNSFSMFNNGICNIGLGICYDMRFPEL 158 (272)
Q Consensus 93 ~Gs~~~~~~~~~yns~~v---------~~~~~~~-----p~~~~~~e~~~~~~G~~~~v~~~~~~~igv~IC~D~~~pe~ 158 (272)
+|++++++++++||++++ ++.|.++ |.+..+.|..+|.||++..+|+++++|+|++||||++||++
T Consensus 82 ~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD~~fpe~ 161 (276)
T 2w1v_A 82 GGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAEL 161 (276)
T ss_dssp CCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCCCEEECSSCEEEECCGGGGGCHHH
T ss_pred ecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCceeEEeCCceEEEEEEeccccHHH
Confidence 997777778899999998 2234333 54444678899999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCceeeeCCCCceE
Q psy17819 159 AQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANILATSQFEETI 238 (272)
Q Consensus 159 ~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~~~~~~~~~~ 238 (272)
.+.++++|||++++|++|+...+..+|..++++||+||++|++.||++|....+..|.|.|+|++|+|+++++.+.++++
T Consensus 162 ~r~~~~~ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~v~~~~~~~e~~ 241 (276)
T 2w1v_A 162 AQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAGTEETI 241 (276)
T ss_dssp HHHHHHTTEEEEEEECCCCTTHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTSCEEEECCSSSEE
T ss_pred HHHHHHcCCCEEEECCcCCCcCCHHHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECCCCCEeEEcCCCCeE
Confidence 99999999999999999877655688999999999999999999999998666788999999999999999998779999
Q ss_pred EEEEechhHHHHhhhcCCCCCCcccchhhhhhc
Q psy17819 239 VYADIDLNTLNKVRDQIPTGKQKRYDLYDVTAK 271 (272)
Q Consensus 239 ~~~~id~~~~~~~r~~~~~~~~~~~~~y~~~~~ 271 (272)
+++++|++.++..|..+++++++||++|.+..|
T Consensus 242 l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~~~ 274 (276)
T 2w1v_A 242 LYSDIDLKKLAEIRQQIPILKQKRADLYTVESK 274 (276)
T ss_dssp EEEEEEHHHHHHHHHHSCGGGSCCTTTEEEEEC
T ss_pred EEEEEcHHHHHHHHHhCChhHhCCHHHhhcccc
Confidence 999999999999999999999999999986543
No 2
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.9e-52 Score=359.95 Aligned_cols=261 Identities=50% Similarity=0.874 Sum_probs=222.9
Q ss_pred cccccEEEEEeec-cCCCHHHHHHHHHHHHHHH--HHCCCcEEEeCCCCCCCCCcchhhhhhhhc-CC--ChHHHHHHHH
Q psy17819 10 TAKSFKIALVQMT-VGKDKNKNLENAVRFIRKA--ADNGASLIVLPECFNCPYGTKYFREYSEEI-GS--GITSKTLSNV 83 (272)
Q Consensus 10 m~~~iria~~Q~~-~~~~~~~n~~~~~~~i~~A--~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~-~~--~~~~~~l~~~ 83 (272)
|+++||||++|++ ...+.+.|++++.+++++| .+.++|||||||++++||..+++..+++.+ ++ ++..+.|+++
T Consensus 7 m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (291)
T 1f89_A 7 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNL 86 (291)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHH
T ss_pred ccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHH
Confidence 6667999999999 7799999999999999999 889999999999999999887766666655 33 6789999999
Q ss_pred HHHcCcEEEEeeeeeccC--CeeEEEEEE--------------EcccCCCCCCccccccccccCCCCceEEeeCCceEEE
Q psy17819 84 AKEKEIFLVGGSIPELDN--DKVYNAATV--------------HLFDIAIPGGITFKESDVLSPGNSFSMFNNGICNIGL 147 (272)
Q Consensus 84 a~~~~~~iv~Gs~~~~~~--~~~yns~~v--------------~~~~~~~p~~~~~~e~~~~~~G~~~~v~~~~~~~igv 147 (272)
|++++++|++|+++++++ +++||++++ |+|+.++|.+..+.|..+|.||++..+|+++++|+|+
T Consensus 87 a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~~~~ig~ 166 (291)
T 1f89_A 87 ANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGKFGV 166 (291)
T ss_dssp HHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEEEEE
T ss_pred HHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCCceEecCCeeEEE
Confidence 999999999997777765 789999988 3344334555556788999999999999999999999
Q ss_pred EeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCc
Q psy17819 148 GICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWAN 227 (272)
Q Consensus 148 ~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~ 227 (272)
+||||++|||+.+.++.+|||++++|++|+...+..+|..++++||+||++|++.||++|..+++..|.|.|+|++|+|+
T Consensus 167 ~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~ 246 (291)
T 1f89_A 167 GICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPRGK 246 (291)
T ss_dssp CCGGGGGCHHHHHHHHHTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTTSC
T ss_pred EEecccCchHHHHHHHhhCCCEEEECCcCCCCCcHHHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCCCC
Confidence 99999999999999999999999999998776567889999999999999999999999976778899999999999999
Q ss_pred eeeeCCCCceEEEEEechhHHHHhhhcCCCCCCcccchhhhhh
Q psy17819 228 ILATSQFEETIVYADIDLNTLNKVRDQIPTGKQKRYDLYDVTA 270 (272)
Q Consensus 228 ~~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~y~~~~ 270 (272)
++++.+.+++++++++|++.++..|..+++++++||++|..++
T Consensus 247 vl~~~~~~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~~ 289 (291)
T 1f89_A 247 IVAEAGEGEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDVN 289 (291)
T ss_dssp EEEECCSSSEEEEEEECHHHHHHHHHHSCCCCCCCC-------
T ss_pred EEEecCCCCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhhc
Confidence 9999877899999999999999999999999999999998764
No 3
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.1e-52 Score=354.02 Aligned_cols=251 Identities=24% Similarity=0.444 Sum_probs=226.0
Q ss_pred cccEEEEEeecc-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcE
Q psy17819 12 KSFKIALVQMTV-GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIF 90 (272)
Q Consensus 12 ~~iria~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 90 (272)
++||||++|++. .++++.|++++.+++++|+++++|||||||++++||.++++...+++.+ ++..+.|+++|++++++
T Consensus 19 ~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~-~~~~~~l~~la~~~~i~ 97 (281)
T 3p8k_A 19 SHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL-GQSFSFIKHLAEKYKVD 97 (281)
T ss_dssp SEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETT-HHHHHHHHHHHHHHTCE
T ss_pred CCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccC-cHHHHHHHHHHhhCCeE
Confidence 379999999995 6999999999999999999999999999999999999887777777776 78999999999999999
Q ss_pred EEEeeeeeccCCeeEEEEEE---------EcccCCCCCCccccccccccCCCCc-eEEee-CCceEEEEeecCCCChHHH
Q psy17819 91 LVGGSIPELDNDKVYNAATV---------HLFDIAIPGGITFKESDVLSPGNSF-SMFNN-GICNIGLGICYDMRFPELA 159 (272)
Q Consensus 91 iv~Gs~~~~~~~~~yns~~v---------~~~~~~~p~~~~~~e~~~~~~G~~~-~v~~~-~~~~igv~IC~D~~~pe~~ 159 (272)
|++|+..+++++++||++++ .+.|.++. ..|.|..+|+||++. .+|++ +++|+|++||||++|||+.
T Consensus 98 iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~--~~f~E~~~f~~G~~~~~v~~~~~~~~ig~~IC~D~~fpe~~ 175 (281)
T 3p8k_A 98 IVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLV--PMLREHEFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELL 175 (281)
T ss_dssp EEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCC--TTTTGGGTCCCCSSCCCCEECTTCCEEEEEEGGGGGCTHHH
T ss_pred EEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECC--CCcCccccCcCCCCCceeEEeCCCcEEEEEEecCCCCcHHH
Confidence 99996667788999999998 12233322 125899999999998 99999 9999999999999999999
Q ss_pred HHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCceeeeCCCCceEE
Q psy17819 160 QVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANILATSQFEETIV 239 (272)
Q Consensus 160 ~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~~~~~~~~~~~ 239 (272)
+.++.+|||+|++|++|+... ..+|..++++||+||++|++.||.+|. +++..|.|.|+|++|+|+++++..++++++
T Consensus 176 r~~~~~Gadli~~psa~~~~~-~~~~~~~~~arA~en~~~vv~~n~~G~-~~~~~~~G~S~ii~p~G~vl~~~~~~e~~l 253 (281)
T 3p8k_A 176 RYPARSGAKIAFYVAQWPMSR-LQHWHSLLKARAIENNMFVIGTNSTGF-DGNTEYAGHSIVINPNGDLVGELNESADIL 253 (281)
T ss_dssp HHHHHTTCCEEEEEECCBGGG-HHHHHHHHHHHHHHHTSEEEEEECEEE-CSSCEEECCCEEECTTSCEEEECCSSCEEE
T ss_pred HHHHHCCCCEEEECCCCCCcc-HHHHHHHHHHHHHHcCCEEEEEccCcC-CCCcEEeeeEEEECCCCCEEEecCCCCeEE
Confidence 999999999999999987643 578899999999999999999999997 567889999999999999999944689999
Q ss_pred EEEechhHHHHhhhcCCCCCCcccchhh
Q psy17819 240 YADIDLNTLNKVRDQIPTGKQKRYDLYD 267 (272)
Q Consensus 240 ~~~id~~~~~~~r~~~~~~~~~~~~~y~ 267 (272)
+++||++.+++.|..+++++++||++|+
T Consensus 254 ~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 254 TVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp EEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred EEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 9999999999999999999999999994
No 4
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.7e-51 Score=352.33 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=213.1
Q ss_pred cccccEEEEEeecc-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhh-hhhhhcCCChHHHHHHHHHHHc
Q psy17819 10 TAKSFKIALVQMTV-GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFR-EYSEEIGSGITSKTLSNVAKEK 87 (272)
Q Consensus 10 m~~~iria~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~a~~~ 87 (272)
+.++||||++|++. .+|++.|++++.+++++|+++++|||||||++++||.+.++. .++++.. +++.+.++++|+++
T Consensus 17 ~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~-~~~~~~l~~~a~~~ 95 (283)
T 3hkx_A 17 RGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQV-DAARSRLRGIARDR 95 (283)
T ss_dssp TTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHH-HHHHHHHHHHHHHT
T ss_pred cCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccC-CHHHHHHHHHHHHh
Confidence 44479999999995 579999999999999999999999999999999999987644 4555555 78999999999999
Q ss_pred CcEEEEeeeeeccC-CeeEEEEEE---------EcccCCCCCCccccccccccCCCC-ceEEeeCCceEEEEeecCCCCh
Q psy17819 88 EIFLVGGSIPELDN-DKVYNAATV---------HLFDIAIPGGITFKESDVLSPGNS-FSMFNNGICNIGLGICYDMRFP 156 (272)
Q Consensus 88 ~~~iv~Gs~~~~~~-~~~yns~~v---------~~~~~~~p~~~~~~e~~~~~~G~~-~~v~~~~~~~igv~IC~D~~~p 156 (272)
+++|++| ++++.+ +++||++++ .+.|.++.+ ..|..+|.||+. ..+|+++++|+|++||||++||
T Consensus 96 ~i~iv~G-~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~---~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~fp 171 (283)
T 3hkx_A 96 GIALVWS-LPGPEGPEQRGITAELADEHGEVLASYQKVQLYG---PEEKAAFVPGEQPPPVLSWGGRQLSLLVCYDVEFP 171 (283)
T ss_dssp TSEEEEC-CBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCH---HHHHHHSCCCCSCCCEEEETTEEEEECCGGGGGSH
T ss_pred CCEEEEE-EEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCC---cCchhhccCCCCCceEEEECCEEEEEEEecCcCCH
Confidence 9999999 677765 789999999 122222211 147889999997 6899999999999999999999
Q ss_pred HHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCceeeeCCCCc
Q psy17819 157 ELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANILATSQFEE 236 (272)
Q Consensus 157 e~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~~~~~~~~ 236 (272)
|+.+.++.+|||++++|++|+...+ .+|..++++||+||++|+++||.+|. +++..+.|.|+|++|+|+++++.+.++
T Consensus 172 e~~r~l~~~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~-~~~~~~~G~S~ii~p~G~vl~~~~~~e 249 (283)
T 3hkx_A 172 EMVRAAAARGAQLVLVPTALAGDET-SVPGILLPARAVENGITLAYANHCGP-EGGLVFDGGSVVVGPAGQPLGELGVEP 249 (283)
T ss_dssp HHHHHHHHTTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHTCEEEEECBEEE-ETTEEEECCCEEECTTSCEEEECCSSC
T ss_pred HHHHHHHHCCCCEEEECCCCCCccc-HHHHHHHHHHHHHhCCEEEEEccccC-CCCeEEeeEEEEECCCCCEEEecCCCC
Confidence 9999999999999999999876543 67889999999999999999999997 567889999999999999999988889
Q ss_pred eEEEEEechhHHHHhhhcCCCCCCcccchhhhh
Q psy17819 237 TIVYADIDLNTLNKVRDQIPTGKQKRYDLYDVT 269 (272)
Q Consensus 237 ~~~~~~id~~~~~~~r~~~~~~~~~~~~~y~~~ 269 (272)
+++++++|++.+++.|..+++++++||++|+.+
T Consensus 250 ~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l 282 (283)
T 3hkx_A 250 GLLVVDLPDQSQDAGSDSADYLQDRRAELHRNW 282 (283)
T ss_dssp EEEEEEEEC----------CHHHHSCHHHHHHH
T ss_pred eEEEEEECHHHHHHHHHhCChhHhcCHhhhhhc
Confidence 999999999999999999999999999999875
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=1.9e-50 Score=342.40 Aligned_cols=249 Identities=30% Similarity=0.457 Sum_probs=219.0
Q ss_pred cEEEEEeecc-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcch---hhhhhhhcCCChHHHHHHHHHHHcCc
Q psy17819 14 FKIALVQMTV-GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKY---FREYSEEIGSGITSKTLSNVAKEKEI 89 (272)
Q Consensus 14 iria~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~---~~~~~~~~~~~~~~~~l~~~a~~~~~ 89 (272)
||||++|++. .+|++.|++++.+++++|+++++|||||||++++||.... +.+.+++...++..+.+.++|+++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~ 81 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGV 81 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCc
Confidence 7999999995 5999999999999999999999999999999999998753 34445533337899999999999999
Q ss_pred EEEEeeeeeccCCeeEEEEEEE----cccCCCCCCccccccccccCCC-CceEEeeCCceEEEEeecCCCChHHHHHHHH
Q psy17819 90 FLVGGSIPELDNDKVYNAATVH----LFDIAIPGGITFKESDVLSPGN-SFSMFNNGICNIGLGICYDMRFPELAQVYRK 164 (272)
Q Consensus 90 ~iv~Gs~~~~~~~~~yns~~v~----~~~~~~p~~~~~~e~~~~~~G~-~~~v~~~~~~~igv~IC~D~~~pe~~~~~~~ 164 (272)
+|++| +++++++++||++++. ....+.+.++.+.|..+|+||+ ...+|+++++|+|++||||++||++.+.++.
T Consensus 82 ~iv~G-~~~~~~~~~yNs~~~i~~~G~~~~y~K~hL~~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~fpe~~r~~~~ 160 (262)
T 3ivz_A 82 YIVAG-TAEKDGDVLYNSAVVVGPRGFIGKYRKIHLFYREKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESARTLAL 160 (262)
T ss_dssp EEEEE-EEEEETTEEEEEEEEEETTEEEEEEECSSCCGGGGGTCBCCCSCSCEEECSSCEEEECCGGGGGSHHHHHHHHH
T ss_pred EEEEe-EEEeeCCcEEEEEEEEcCCeeEEEEeecccCCchhceEeCCCCCceEEEECCEEEEEEEecCCCchHHHHHHHH
Confidence 99999 8899899999999981 0011122234578999999999 8999999999999999999999999999999
Q ss_pred cCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCceeeeCCC-CceEEEEEe
Q psy17819 165 KGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANILATSQF-EETIVYADI 243 (272)
Q Consensus 165 ~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~~~~~~-~~~~~~~~i 243 (272)
+|||++++|++|+.+ +|..++++||+||++|+++||.+|. +++..+.|.|+|++|+|+++++.+. +++++++++
T Consensus 161 ~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv~~n~~G~-~~~~~~~G~S~ii~p~G~il~~~~~~~~~~~~~~i 235 (262)
T 3ivz_A 161 KGADVIAHPANLVMP----YAPRAMPIRALENKVYTVTADRVGE-ERGLKFIGKSLIASPKAEVLSMASETEEEVGVAEI 235 (262)
T ss_dssp TTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEEEEECCSE-ETTEECCCCCEEECTTSCEEEECCSSCCEEEEEEC
T ss_pred CCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEEEECCCCc-CCCceEeeeEEEECCCCCEeecCCCCCceEEEEEE
Confidence 999999999998652 6889999999999999999999987 4577899999999999999999874 677999999
Q ss_pred chhHHHHhhhc--CCCCCCcccchhhh
Q psy17819 244 DLNTLNKVRDQ--IPTGKQKRYDLYDV 268 (272)
Q Consensus 244 d~~~~~~~r~~--~~~~~~~~~~~y~~ 268 (272)
|++.+++.|.+ +|+++++||++|.|
T Consensus 236 d~~~~~~~R~~~~~p~l~~rr~~lY~~ 262 (262)
T 3ivz_A 236 DLSLVRNKRINDLNDIFKDRREEYYFR 262 (262)
T ss_dssp CHHHHHCCEEETTEEHHHHCCGGGSCC
T ss_pred cHHHHHHHhhcccCchhhhcCHhhhCC
Confidence 99999999987 79999999999975
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.5e-49 Score=334.70 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=215.8
Q ss_pred ccEEEEEeecc-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEE
Q psy17819 13 SFKIALVQMTV-GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFL 91 (272)
Q Consensus 13 ~iria~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 91 (272)
+||||++|++. ..+.+.|++++.+++++| +.++|||||||++++||.... ...++... ++..+.++++|++++++|
T Consensus 3 ~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~-~~~a~~~~-~~~~~~l~~~a~~~~~~i 79 (266)
T 2e11_A 3 DLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEA-IDKAEDMD-GPTVAWIRTQAARLGAAI 79 (266)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGG-GGGCEETT-SHHHHHHHHHHHHHTSEE
T ss_pred ccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhH-HHhhccCC-CHHHHHHHHHHHHhCCEE
Confidence 68999999995 589999999999999999 889999999999999996433 33444555 889999999999999999
Q ss_pred EEeeeeeccCCeeEEEEEE--------EcccCCCCCCccccccccccCCCCceEEeeCCceEEEEeecCCCChHHHHHHH
Q psy17819 92 VGGSIPELDNDKVYNAATV--------HLFDIAIPGGITFKESDVLSPGNSFSMFNNGICNIGLGICYDMRFPELAQVYR 163 (272)
Q Consensus 92 v~Gs~~~~~~~~~yns~~v--------~~~~~~~p~~~~~~e~~~~~~G~~~~v~~~~~~~igv~IC~D~~~pe~~~~~~ 163 (272)
++| .++++++++||++++ ++.|.++.. .++|..+|.||++..+|+++++|+|++||||++||++.+.++
T Consensus 80 v~G-~~~~~~~~~yNs~~~i~~~G~i~~y~K~hL~~--~~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD~~fpe~~r~~~ 156 (266)
T 2e11_A 80 TGS-VQLRTEHGVFNRLLWATPDGALQYYDKRHLFR--FGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRF 156 (266)
T ss_dssp EEE-EEEEETTEEEEEEEEECTTSCEEEEECSSCCG--GGTTTTTSBCCCSCCCEEETTEEEEEEEGGGGGCTTTTCCCB
T ss_pred EEe-eeEccCCcEEEEEEEECCCCCEEEEeeeccCC--CcChhhhccCCCCceEEEECCEEEEEEEEeccCCHHHHHHHH
Confidence 999 667778899999998 111222211 146889999999999999999999999999999999998864
Q ss_pred ---Hc---CCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCceeeeCCCCce
Q psy17819 164 ---KK---GCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANILATSQFEET 237 (272)
Q Consensus 164 ---~~---ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~~~~~~~~~ 237 (272)
++ |||++++|++|+.. ...+|..++++||+||++|+++||.+|...++..+.|.|+|++|+|+++++.+++++
T Consensus 157 ~~~~~~~~ga~~i~~~s~w~~~-~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~~~~~~~e~ 235 (266)
T 2e11_A 157 DVERPGQLDFDLQLFVANWPSA-RAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQ 235 (266)
T ss_dssp SSSSTTSBSCSEEEEEECCCGG-GHHHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEEEEEESSCE
T ss_pred hhhhccCCCCcEEEEeCCCCCC-chHHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCceeeecCCCCe
Confidence 44 99999999998654 346799999999999999999999999865567899999999999999998887899
Q ss_pred EEEEEechhHHHHhhhcCCCCCCcccchhh
Q psy17819 238 IVYADIDLNTLNKVRDQIPTGKQKRYDLYD 267 (272)
Q Consensus 238 ~~~~~id~~~~~~~r~~~~~~~~~~~~~y~ 267 (272)
++++++|++.++..|..+++++++||++|+
T Consensus 236 ~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 236 VVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp EEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred EEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 999999999999999999999999999996
No 7
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=2.7e-49 Score=358.49 Aligned_cols=262 Identities=32% Similarity=0.571 Sum_probs=227.8
Q ss_pred ccccccccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcc-hhhhhhhhcCCChHHHHHHHHHH
Q psy17819 7 KMSTAKSFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTK-YFREYSEEIGSGITSKTLSNVAK 85 (272)
Q Consensus 7 ~~~m~~~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~-~~~~~~~~~~~~~~~~~l~~~a~ 85 (272)
.|+|. ++|||++|++...+.+.|++++.+++++|+++++|||||||++++|+... .....+...+ ++..+.|.++|+
T Consensus 9 ~m~~~-~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~-~~~~~~l~~~A~ 86 (440)
T 1ems_A 9 TMATG-RHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-CEYMEKYRELAR 86 (440)
T ss_dssp -CCCS-EEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hcccC-CceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCC-CHHHHHHHHHHH
Confidence 47775 89999999997789999999999999999999999999999999887653 2233344555 788999999999
Q ss_pred HcCcEEEEeeee--ec-cCCeeEEEEEE---------EcccCC-----CCCCccccccccccCCCCceE-EeeCCceEEE
Q psy17819 86 EKEIFLVGGSIP--EL-DNDKVYNAATV---------HLFDIA-----IPGGITFKESDVLSPGNSFSM-FNNGICNIGL 147 (272)
Q Consensus 86 ~~~~~iv~Gs~~--~~-~~~~~yns~~v---------~~~~~~-----~p~~~~~~e~~~~~~G~~~~v-~~~~~~~igv 147 (272)
+++++|++|+.. ++ +++++||++++ .+.|.+ +|.+..+.|..+|.||++..+ |+++++|+|+
T Consensus 87 ~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~~~iG~ 166 (440)
T 1ems_A 87 KHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGL 166 (440)
T ss_dssp HTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEECC
T ss_pred HcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCceeEECCCeeEEE
Confidence 999999999665 55 45789999988 222333 355556788999999999888 9999999999
Q ss_pred EeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCc
Q psy17819 148 GICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWAN 227 (272)
Q Consensus 148 ~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~ 227 (272)
+||||.+||++.+.++.+||+++++|++|+...+..+|..++++||+||++|++.||++|...++..|.|.|+|++|+|+
T Consensus 167 ~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~~~~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~G~ 246 (440)
T 1ems_A 167 SICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGA 246 (440)
T ss_dssp CCGGGGGCHHHHHHHHHTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTTSC
T ss_pred EEeccccChHHHHHHHHcCCcEEEECCcCCCCCcHHHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCCCC
Confidence 99999999999999999999999999998765556789999999999999999999999975556889999999999999
Q ss_pred eeeeCCCCceEEEEEechhHHHHhhhcCCCCCCcccchhhhhh
Q psy17819 228 ILATSQFEETIVYADIDLNTLNKVRDQIPTGKQKRYDLYDVTA 270 (272)
Q Consensus 228 ~~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~y~~~~ 270 (272)
++++.+.+++++++++|++.++..|..+++++++||++|.++.
T Consensus 247 vla~~~~~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~ 289 (440)
T 1ems_A 247 VVAQCSERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHI 289 (440)
T ss_dssp EEEECCSSSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCC
T ss_pred eeccCCCCCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhccc
Confidence 9999887899999999999999999999999999999997653
No 8
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=5.3e-48 Score=345.19 Aligned_cols=262 Identities=21% Similarity=0.333 Sum_probs=214.2
Q ss_pred cccccccEEEEEeeccC--------CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcc-----hhhhhhhhcCCC
Q psy17819 8 MSTAKSFKIALVQMTVG--------KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTK-----YFREYSEEIGSG 74 (272)
Q Consensus 8 ~~m~~~iria~~Q~~~~--------~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~-----~~~~~~~~~~~~ 74 (272)
+.++++||||++|+++. .+.+.|++++.+++++|++.++|||||||++++||... .+..+++....+
T Consensus 67 ~~~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~ 146 (405)
T 2vhh_A 67 TRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENG 146 (405)
T ss_dssp SSCCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTS
T ss_pred hcCCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCC
Confidence 33566799999999853 36789999999999999999999999999999998531 122344444237
Q ss_pred hHHHHHHHHHHHcCcEEEEeeeeecc---CCeeEEEEEE---------EcccCCCCCCccccccccccCCCC-ceEEeeC
Q psy17819 75 ITSKTLSNVAKEKEIFLVGGSIPELD---NDKVYNAATV---------HLFDIAIPGGITFKESDVLSPGNS-FSMFNNG 141 (272)
Q Consensus 75 ~~~~~l~~~a~~~~~~iv~Gs~~~~~---~~~~yns~~v---------~~~~~~~p~~~~~~e~~~~~~G~~-~~v~~~~ 141 (272)
+..+.|+++|++++++|++| +.+++ ++++||++++ .+.|.+++.+..|.|..+|.+|+. ..+|+++
T Consensus 147 ~~~~~l~~lA~~~~i~Iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~ 225 (405)
T 2vhh_A 147 PTTKMLAELAKAYNMVIIHS-ILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETE 225 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEET
T ss_pred HHHHHHHHHHHHCCEEEEEe-ceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEEC
Confidence 89999999999999999999 66765 5789999998 334556665556789999999985 8999999
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCC-----------
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKN----------- 210 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~----------- 210 (272)
++|+|++||||++||+..+.++.+||++|++|++|....+..+|..++++||+||++||+++|.+|.+.
T Consensus 226 ~~riG~~ICyD~~fPe~~r~la~~GAdill~psa~~~~~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~ 305 (405)
T 2vhh_A 226 FGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGN 305 (405)
T ss_dssp TEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBCTTTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC---------
T ss_pred CEEEEEEEeccccChHHHHHHHHcCCCEEEEcccCCCCCCHHHHHHHHHHHHHHcCceEEEeccccccccccccccccCc
Confidence 999999999999999999999999999999999987655567899999999999999999999998742
Q ss_pred ----CCccceeeeEEECCCCceeeeCC-CCceEEEEEechhHHHHhhhcCCCCCCcccchhhhhh
Q psy17819 211 ----SDYIAWGHSTVVDPWANILATSQ-FEETIVYADIDLNTLNKVRDQIPTGKQKRYDLYDVTA 270 (272)
Q Consensus 211 ----~~~~~~G~S~i~~p~G~~~~~~~-~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~y~~~~ 270 (272)
+...|.|.|+|++|+|+++++.+ ++++++++++|++.+++.|..+++++++||++|..+.
T Consensus 306 ~~~~~~~~f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~ 370 (405)
T 2vhh_A 306 KAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESF 370 (405)
T ss_dssp --------EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHH
T ss_pred cccccCceeccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHH
Confidence 12468999999999999999886 6899999999999999999999999999999998764
No 9
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=5.6e-47 Score=327.63 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=215.1
Q ss_pred ccEEEEEeecc-C--CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchh-------hhhhhh-cCCChHHHHHH
Q psy17819 13 SFKIALVQMTV-G--KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYF-------REYSEE-IGSGITSKTLS 81 (272)
Q Consensus 13 ~iria~~Q~~~-~--~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~-------~~~~~~-~~~~~~~~~l~ 81 (272)
+||||++|++. . ++.+.|++++.+++++|+++++|||||||++++||.+.++ ..+.+. .. ++..+.|.
T Consensus 3 ~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 81 (303)
T 1uf5_A 3 QMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMP-GPVVRPLF 81 (303)
T ss_dssp EEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSS-CTTTHHHH
T ss_pred cEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCC-CHHHHHHH
Confidence 58999999994 4 7999999999999999999999999999999999975431 111111 13 67889999
Q ss_pred HHHHHcCcEEEEeeeeecc-CC---eeEEEEEE---------EcccCCCCCCc------cc--cccccccCCC-CceEEe
Q psy17819 82 NVAKEKEIFLVGGSIPELD-ND---KVYNAATV---------HLFDIAIPGGI------TF--KESDVLSPGN-SFSMFN 139 (272)
Q Consensus 82 ~~a~~~~~~iv~Gs~~~~~-~~---~~yns~~v---------~~~~~~~p~~~------~~--~e~~~~~~G~-~~~v~~ 139 (272)
++|++++++|++| ++++. ++ ++||++++ ++.|.++|+.. .| .|..+|.||+ +..+|+
T Consensus 82 ~~a~~~~~~iv~G-~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~~ 160 (303)
T 1uf5_A 82 EKAAELGIGFNLG-YAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYD 160 (303)
T ss_dssp HHHHHHTCEEEEE-EEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEE
T ss_pred HHHHHhCeEEEEe-eeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCceEe
Confidence 9999999999999 66653 45 79999998 33455554211 22 5888999999 899999
Q ss_pred eCCceEEEEeecCCCChHHHHHHHHcCCcEEEeccc---cCCCC------CchhHHHHHHHHhhhCceEEEEEcCCcCCC
Q psy17819 140 NGICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGA---FNMTT------GPLHWELLVRSRANDNQVYVAACSPAQDKN 210 (272)
Q Consensus 140 ~~~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~---~~~~~------~~~~~~~~~~~ra~en~~~vv~~n~~g~~~ 210 (272)
++++|+|++||||++||++.+.++++|||++++|++ ++... ...+|..++++||+||++|++.||++|. +
T Consensus 161 ~~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~-~ 239 (303)
T 1uf5_A 161 VDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGM-E 239 (303)
T ss_dssp ETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEE-E
T ss_pred cCCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECcccc-c
Confidence 999999999999999999999999999999966544 43332 2355778899999999999999999997 4
Q ss_pred CCccceeeeEEECCCCceeeeCC-CCceEEEEEechhHHHHhhhc-CCCCCCcccchhhhhhcC
Q psy17819 211 SDYIAWGHSTVVDPWANILATSQ-FEETIVYADIDLNTLNKVRDQ-IPTGKQKRYDLYDVTAKL 272 (272)
Q Consensus 211 ~~~~~~G~S~i~~p~G~~~~~~~-~~~~~~~~~id~~~~~~~r~~-~~~~~~~~~~~y~~~~~~ 272 (272)
++..|.|+|+|++|+|+++++.+ ++++++++++|++.++..|.. +++++++||++|.++..|
T Consensus 240 ~~~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~~ 303 (303)
T 1uf5_A 240 ENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAEL 303 (303)
T ss_dssp TTEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGCC
T ss_pred CCccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhcC
Confidence 56789999999999999999987 478999999999999999999 999999999999988764
No 10
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.2e-43 Score=332.94 Aligned_cols=244 Identities=16% Similarity=0.193 Sum_probs=198.2
Q ss_pred cccccccEEEEEeec-cCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHH
Q psy17819 8 MSTAKSFKIALVQMT-VGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKE 86 (272)
Q Consensus 8 ~~m~~~iria~~Q~~-~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 86 (272)
|.|+ +||||++|++ ..+|++.|++++.+++++|+++++|||||||++++||.++++. ...... ++..+.+.++|++
T Consensus 1 m~M~-~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~-~~~~~~-~~~~~~l~~la~~ 77 (634)
T 3ilv_A 1 MSLS-TIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLF-LTDWVA-ETAIEYCFEIAAS 77 (634)
T ss_dssp ---C-EEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGG-GSHHHH-HHHHHHHHHHHTT
T ss_pred CCCC-CeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHh-hChhhh-HHHHHHHHHHHHh
Confidence 5576 7999999999 4689999999999999999999999999999999999998765 333344 6788999999999
Q ss_pred c-CcEEEEeeeeeccCCeeEEEEEE--------EcccCCCCCCccccccccccCCCCc----------------eEEeeC
Q psy17819 87 K-EIFLVGGSIPELDNDKVYNAATV--------HLFDIAIPGGITFKESDVLSPGNSF----------------SMFNNG 141 (272)
Q Consensus 87 ~-~~~iv~Gs~~~~~~~~~yns~~v--------~~~~~~~p~~~~~~e~~~~~~G~~~----------------~v~~~~ 141 (272)
+ ++++++| ++++.++++||++++ .+.|.++|.+..|.|.++|.||+.. .+|+++
T Consensus 78 ~~~i~ivvG-~p~~~~~~lyNsa~vi~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~~ 156 (634)
T 3ilv_A 78 CTDITVSLG-LPMRIAGITYNCVCLVENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVK 156 (634)
T ss_dssp CTTSEEEEE-EEEEETTEEEEEEEEEETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEET
T ss_pred CCCCEEEEe-eeEeeCCCccEEEEEEECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccCCeEEEEC
Confidence 6 9999999 888889999999988 4568888988889999999999875 689999
Q ss_pred CceEEEEeecCCCChH-HHHHHHHcCCcEEEeccccCCCCCc-hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeee
Q psy17819 142 ICNIGLGICYDMRFPE-LAQVYRKKGCDLLIYPGAFNMTTGP-LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHS 219 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe-~~~~~~~~ga~lil~p~~~~~~~~~-~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S 219 (272)
++++|+.||||+|||+ ..+.++.+||++|++|++|++..++ .+|..++++||.||+++++++|.+|.+.++..|.|.|
T Consensus 157 g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S 236 (634)
T 3ilv_A 157 DARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEV 236 (634)
T ss_dssp TEEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCE
T ss_pred CEEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceE
Confidence 9999999999999998 8899999999999999999887654 6788999999999999999999999866789999999
Q ss_pred EEECCCCceeeeCC----CCceEEEEEechhHHHHhhhcCC
Q psy17819 220 TVVDPWANILATSQ----FEETIVYADIDLNTLNKVRDQIP 256 (272)
Q Consensus 220 ~i~~p~G~~~~~~~----~~~~~~~~~id~~~~~~~r~~~~ 256 (272)
.|. |+|+++++.+ .+++++++++|++.++..|..++
T Consensus 237 ~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~ 276 (634)
T 3ilv_A 237 LIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLT 276 (634)
T ss_dssp EEE-ETTEEEEECCSSCSSSEEEEEEEEEC-----------
T ss_pred EEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCC
Confidence 888 9999999986 24689999999999998887764
No 11
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=4.3e-43 Score=324.70 Aligned_cols=230 Identities=20% Similarity=0.247 Sum_probs=202.5
Q ss_pred ccEEEEEeec-cCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHH----c
Q psy17819 13 SFKIALVQMT-VGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKE----K 87 (272)
Q Consensus 13 ~iria~~Q~~-~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~----~ 87 (272)
+||||++|++ +.+|++.|++++.+++++|+++|||||||||+++|||.++++....... ....+.+.+++++ .
T Consensus 6 kmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~--~~~~~~l~~la~~~~~~~ 83 (565)
T 4f4h_A 6 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFY--AASDAALAELAAQLKPFA 83 (565)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHH--HHHHHHHHHHHHHHTTST
T ss_pred ceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHH--HHHHHHHHHHHHHhhhcC
Confidence 4899999999 6799999999999999999999999999999999999998765433333 3444555555544 4
Q ss_pred CcEEEEeeeeeccC----------------CeeEEEEEE--------EcccCCCCCCccccccccccCCCCceEEeeCCc
Q psy17819 88 EIFLVGGSIPELDN----------------DKVYNAATV--------HLFDIAIPGGITFKESDVLSPGNSFSMFNNGIC 143 (272)
Q Consensus 88 ~~~iv~Gs~~~~~~----------------~~~yns~~v--------~~~~~~~p~~~~~~e~~~~~~G~~~~v~~~~~~ 143 (272)
++.+++| ++.+.+ +++||++++ ++.|.++|++..|.|.++|.+|+...+|+++++
T Consensus 84 ~i~ivvG-~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~~~v~~~~g~ 162 (565)
T 4f4h_A 84 GLAVLVG-HPLRAPSADGNANRAIERGVPPVDTYNAASLIVGGEVAGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGV 162 (565)
T ss_dssp TCEEEEE-EEEECC-----CCCCCCTTSCCCSEEEEEEEEETTEEEEEEECCSCCCSTTCCGGGTCCCCCCCCEEEETTE
T ss_pred CcEEEEe-eeeeecccccccccceecccCCCceEEEEEEEECCEEEEEEeeeecCCCcccceeccccCCCcceeEEecCc
Confidence 8999999 666532 359999988 567889999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCc-hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEE
Q psy17819 144 NIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGP-LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVV 222 (272)
Q Consensus 144 ~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~-~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~ 222 (272)
|+|+.||||+||||..+.++.+||+++++|+++++..++ ++|..++++||.+|+++++++|.+|. +++.+|+|+|+|+
T Consensus 163 ~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~-~~~~~f~G~S~ii 241 (565)
T 4f4h_A 163 KFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGG-QDELVFDGGSFVL 241 (565)
T ss_dssp EEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEECEEE-ETTEEEEBCCEEE
T ss_pred EEEEEEeehhcccchhHHHHhCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeeeecC-CCCeEEECCccee
Confidence 999999999999999999999999999999999888775 67889999999999999999999998 6789999999999
Q ss_pred CCCCceeeeCC-CCceEEEEEechh
Q psy17819 223 DPWANILATSQ-FEETIVYADIDLN 246 (272)
Q Consensus 223 ~p~G~~~~~~~-~~~~~~~~~id~~ 246 (272)
+|+|+++++.+ .+++++++++|..
T Consensus 242 dp~G~vla~~~~f~e~~~~~d~d~~ 266 (565)
T 4f4h_A 242 DGAGELVAKMPQFEEGNAIVEFDGA 266 (565)
T ss_dssp CTTSCEEEECCBSCCEEEEEEEETT
T ss_pred cCCCcEEEEccccccceEEEEeccc
Confidence 99999999997 5899999999844
No 12
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=3e-43 Score=328.57 Aligned_cols=235 Identities=24% Similarity=0.280 Sum_probs=209.3
Q ss_pred cccccEEEEEeec-cCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHc-
Q psy17819 10 TAKSFKIALVQMT-VGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEK- 87 (272)
Q Consensus 10 m~~~iria~~Q~~-~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~- 87 (272)
|+++||||++|++ ..+|++.|++++.+++++|+++++|||||||++++||.++++....... .+..+.|.++|+++
T Consensus 1 M~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~--~~~~~~l~~la~~~~ 78 (590)
T 3n05_A 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV--EASRTALRELAARLA 78 (590)
T ss_dssp -CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH--HHHHHHHHHHHHHHH
T ss_pred CCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH--HHHHHHHHHHHHhhh
Confidence 5567999999999 5699999999999999999999999999999999999998766444433 67889999999998
Q ss_pred -C----cEEEEeeeeecc-C---------CeeEEEEEE--------EcccCCCCCCccccccccccCCCCceEEeeCCce
Q psy17819 88 -E----IFLVGGSIPELD-N---------DKVYNAATV--------HLFDIAIPGGITFKESDVLSPGNSFSMFNNGICN 144 (272)
Q Consensus 88 -~----~~iv~Gs~~~~~-~---------~~~yns~~v--------~~~~~~~p~~~~~~e~~~~~~G~~~~v~~~~~~~ 144 (272)
+ ++|++| .+++. + +++||++++ .+.|.++|.+..|.|.++|.||+...+|+++++|
T Consensus 79 ~~~~~~i~ivvG-~~~~~~~~~~~~~~~~~~lyNsa~vi~~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~~~v~~~~g~~ 157 (590)
T 3n05_A 79 EEGFGELPVLVG-YLDRSESAQPKYGQPAGAPRNAAAVLHRGRVALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVD 157 (590)
T ss_dssp HTTCTTSCEEEE-EEEECSSCBTTTTBCTTCEEEEEEEEETTEEEEEEECCCCCSSSSCCHHHHCCCCCEEEEEEETTEE
T ss_pred hccCCceEEEEe-eEEEEcCcccccccccCCeeEEEEEEeCCEEEEEEeCccCCCCCccCccccccCCCcceEEEECCEE
Confidence 6 999999 55654 2 379999988 4567788888889999999999999999999999
Q ss_pred EEEEeecCCCC-hHHHHHHHHcCCcEEEeccccCCCCCc-hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEE
Q psy17819 145 IGLGICYDMRF-PELAQVYRKKGCDLLIYPGAFNMTTGP-LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVV 222 (272)
Q Consensus 145 igv~IC~D~~~-pe~~~~~~~~ga~lil~p~~~~~~~~~-~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~ 222 (272)
+|+.||+|+|| |+..+.++.+||+++++|++|++..+. .+|..++++||.||++++++||.+|. +++..|.|.|+|+
T Consensus 158 iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~~G~-~~~~~f~G~S~ii 236 (590)
T 3n05_A 158 IALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGG-QDELVFDGDSIVV 236 (590)
T ss_dssp EEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEECEEE-ETTEEEEBCCEEE
T ss_pred EEEEeehhhccCChHHHHHHHcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEecccC-CCCeEEeCcEEEE
Confidence 99999999999 999999999999999999999876554 66889999999999999999999998 5789999999999
Q ss_pred CCCCceeeeCC-CCceEEEEEechhHH
Q psy17819 223 DPWANILATSQ-FEETIVYADIDLNTL 248 (272)
Q Consensus 223 ~p~G~~~~~~~-~~~~~~~~~id~~~~ 248 (272)
+|+|+++++.+ ++++++++++|++.+
T Consensus 237 dp~G~vla~~~~~~e~~~~~didl~~~ 263 (590)
T 3n05_A 237 DRDGEVVARAPQFSEGCVVLDLDLPAA 263 (590)
T ss_dssp CTTSCEEEECCBTSCEEEEEEEEECCC
T ss_pred CCCCcEEEEcCCCCCcEEEEEEccccc
Confidence 99999999997 589999999998765
No 13
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=7.4e-43 Score=305.87 Aligned_cols=237 Identities=19% Similarity=0.238 Sum_probs=204.1
Q ss_pred cccEEEEEeecc-----CCCHHHHHHHHHHHHHHHHH--CCCcEEEeCCCCCCCCCc--chhhhhhhhcCCChHHHHHHH
Q psy17819 12 KSFKIALVQMTV-----GKDKNKNLENAVRFIRKAAD--NGASLIVLPECFNCPYGT--KYFREYSEEIGSGITSKTLSN 82 (272)
Q Consensus 12 ~~iria~~Q~~~-----~~~~~~n~~~~~~~i~~A~~--~~~dlvvfPE~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~ 82 (272)
++||||++|+++ .++++.|++++.+++++|++ .++|||||||++++||.. +++...+..++ ++..+.|++
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~-~~~~~~l~~ 89 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVAIP-GEETEIFSR 89 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSHHHHHHHCBCSS-SHHHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCHHHHHHHhccCC-CHHHHHHHH
Confidence 369999999984 25789999999999999987 799999999999999643 44555666666 889999999
Q ss_pred HHHHcCcEEEEeeee-eccC----CeeEEEEEE---------EcccCCCCCCccccccccccCCCCceEEee-CCceEEE
Q psy17819 83 VAKEKEIFLVGGSIP-ELDN----DKVYNAATV---------HLFDIAIPGGITFKESDVLSPGNSFSMFNN-GICNIGL 147 (272)
Q Consensus 83 ~a~~~~~~iv~Gs~~-~~~~----~~~yns~~v---------~~~~~~~p~~~~~~e~~~~~~G~~~~v~~~-~~~~igv 147 (272)
+|+++++++++| ++ ++.+ +.+||++++ ++.|.+ .|.|..+|.||+...+|++ .|.|+|+
T Consensus 90 ~a~~~~i~iv~G-~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~h-----lf~e~~~f~pG~~~~v~~~~~G~riG~ 163 (341)
T 2uxy_A 90 ACRKANVWGVFS-LTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKII-----PWCPIEGWYPGGQTYVSEGPKGMKISL 163 (341)
T ss_dssp HHHHHTCEEEEE-EEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSS-----CCTTTCCCBCCCCCCCEECGGGCEEEE
T ss_pred HHHHhCcEEEEE-eeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeec-----cCCCccceeCCCCceEEECCCCCEEEE
Confidence 999999999999 55 6542 349999998 122222 1456678999999899999 5779999
Q ss_pred EeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCc
Q psy17819 148 GICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWAN 227 (272)
Q Consensus 148 ~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~ 227 (272)
+||||++|||+.+.++.+||++|++|++|+.. ...+|..++++||+||++|+++||.+|. +++..|.|.|+|++|+|+
T Consensus 164 ~ICyD~~fpe~~r~l~~~Gadlll~psa~~~~-~~~~~~~l~~arA~En~~~vv~an~~G~-~~~~~~~G~S~Iidp~G~ 241 (341)
T 2uxy_A 164 IIXDDGNYPEIWRDCAMKGAELIVRCQGYMYP-AKDQQVMMAKAMAWANNCYVAVANAAGF-DGVYSYFGHSAIIGFDGR 241 (341)
T ss_dssp EEGGGGGSHHHHHHHHHTTCSEEEEEECCBTT-CHHHHHHHHHHHHHHHTCEEEEEECEEE-CSSCEEECCCEEECTTSC
T ss_pred EEccCCcCcHHHHHHHHcCCCEEEEcCCCCCC-cHHHHHHHHHHHHHhCCcEEEEECCCCC-CCCceeeeEEEEECCCCC
Confidence 99999999999999999999999999998653 4578999999999999999999999997 467889999999999999
Q ss_pred eeeeCC-CCceEEEEEechhHHHHhhhcCCC
Q psy17819 228 ILATSQ-FEETIVYADIDLNTLNKVRDQIPT 257 (272)
Q Consensus 228 ~~~~~~-~~~~~~~~~id~~~~~~~r~~~~~ 257 (272)
++++.+ ++++++++++|++.++..|..++.
T Consensus 242 vla~~~~~~e~il~a~id~~~~~~~R~~~~~ 272 (341)
T 2uxy_A 242 TLGECGEEEMGIQYAQLSLSQIRDARANDQS 272 (341)
T ss_dssp EEEECCSCTTCEEEEEEEHHHHHHHHHHCCT
T ss_pred EEEECCCCCCEEEEEEEcHHHHHHHHhhcch
Confidence 999987 578999999999999999998876
No 14
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=1.6e-42 Score=303.14 Aligned_cols=238 Identities=22% Similarity=0.320 Sum_probs=202.1
Q ss_pred ccEEEEEeeccC-----CCHHHHHHHHHHHHHHHHH--CCCcEEEeCCCCCCCCCcc--hhhhhhhhcCCChHHHHHHHH
Q psy17819 13 SFKIALVQMTVG-----KDKNKNLENAVRFIRKAAD--NGASLIVLPECFNCPYGTK--YFREYSEEIGSGITSKTLSNV 83 (272)
Q Consensus 13 ~iria~~Q~~~~-----~~~~~n~~~~~~~i~~A~~--~~~dlvvfPE~~~~g~~~~--~~~~~~~~~~~~~~~~~l~~~ 83 (272)
++|||++|++++ ++++.|++++.+++++|++ .++|||||||++++||... .+...+...+ ++..+.|.++
T Consensus 13 ~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~-~~~~~~l~~~ 91 (334)
T 2dyu_A 13 GFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVP-GKETELYAKA 91 (334)
T ss_dssp CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTTTSGGGCBCSS-SHHHHHHHHH
T ss_pred ccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChhHHHHhhccCC-CHHHHHHHHH
Confidence 599999999843 5788999999999999987 7999999999999997543 2344455555 7899999999
Q ss_pred HHHcCcEEEEeeeeecc-CCe--eEEEEEE---------EcccCCCCCCccccccccccCCCCce-EEee-CCceEEEEe
Q psy17819 84 AKEKEIFLVGGSIPELD-NDK--VYNAATV---------HLFDIAIPGGITFKESDVLSPGNSFS-MFNN-GICNIGLGI 149 (272)
Q Consensus 84 a~~~~~~iv~Gs~~~~~-~~~--~yns~~v---------~~~~~~~p~~~~~~e~~~~~~G~~~~-v~~~-~~~~igv~I 149 (272)
|+++++++++| +++++ ++. +||++++ .+.|.+ .|.|...|.||+... +|++ .|.|+|++|
T Consensus 92 a~~~~i~iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~h-----lf~e~~~f~~G~~~~~v~~~~~g~~iG~~I 165 (334)
T 2dyu_A 92 CKEAKVYGVFS-IMERNPDSNKNPYNTAIIIDPQGEIILKYRKLF-----PWNPIEPWYPGDLGMPVCEGPGGSKLAVCI 165 (334)
T ss_dssp HHHHTCEEEEE-EEECCSSTTSCCEEEEEEECTTSCEEEEEECSS-----CCTTTCCCCCCCSCCCCEECGGGCEEEEEE
T ss_pred HHHhCeEEEEe-eEEECCCCCceeEEEEEEECCCCCEEEEEeecc-----CCCCcccCcCCCCCceeEECCCCCEEEEEE
Confidence 99999999999 66764 344 9999998 112222 234566799999754 8998 577999999
Q ss_pred ecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCcee
Q psy17819 150 CYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANIL 229 (272)
Q Consensus 150 C~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~ 229 (272)
|||++|||+.+.++.+|||+|++|++|+.. ...+|..++++||+||++|+++||++|. +++..|.|.|+|++|+|+++
T Consensus 166 CyD~~fpe~~r~~~~~Gadlil~psaw~~~-~~~~~~~~~~arA~En~~~vv~an~~G~-~~~~~~~G~S~Iidp~G~vl 243 (334)
T 2dyu_A 166 CHDGMIPELAREAAYKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNLAGY-DNVFYYFGEGQICNFDGTTL 243 (334)
T ss_dssp GGGGGCHHHHHHHHHTTCSEEEEEESSCTT-SHHHHHHHHHHHHHHHTCEEEEEECSBS-SSSCCCCCEEEEECTTSCEE
T ss_pred ECCCCchHHHHHHHHcCCCEEEEeCCCCCC-cHHHHHHHHHHHHHhCCCEEEEECCCcC-CCCeeeeeEEEEECCCCCEe
Confidence 999999999999999999999999998654 4578999999999999999999999997 46788999999999999999
Q ss_pred eeCC-CCceEEEEEechhHHHHhhhcCCCCC
Q psy17819 230 ATSQ-FEETIVYADIDLNTLNKVRDQIPTGK 259 (272)
Q Consensus 230 ~~~~-~~~~~~~~~id~~~~~~~r~~~~~~~ 259 (272)
++.+ ++++++++++|++.+++.|..+++..
T Consensus 244 a~~~~~~e~il~a~idl~~~~~~R~~~~~~~ 274 (334)
T 2dyu_A 244 VQGHRNPWEIVTGEIYPKMADNARLSWGLEN 274 (334)
T ss_dssp EECCCCTTCEEEEEECHHHHHHHHHHCSTTC
T ss_pred eecCCCCCeEEEEEEcHHHHHHHHhhCchhh
Confidence 9987 57899999999999999999987643
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=4.2e-41 Score=317.17 Aligned_cols=253 Identities=22% Similarity=0.220 Sum_probs=211.5
Q ss_pred ccccccccEEEEEeecc-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcC-CChHHHHHHHHH
Q psy17819 7 KMSTAKSFKIALVQMTV-GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIG-SGITSKTLSNVA 84 (272)
Q Consensus 7 ~~~m~~~iria~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~-~~~~~~~l~~~a 84 (272)
+|+|. .||||++|++. .+|++.|++++.+++++|+++++|||||||++++||.++++........ ..+.++.|.++|
T Consensus 7 ~~~~g-~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~~~~~l~~l~~~a 85 (680)
T 3sdb_A 7 AYQHG-FVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTES 85 (680)
T ss_dssp TGGGT-EEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HhhCC-CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHhhHHHHHHHHHHh
Confidence 46664 89999999995 6999999999999999999999999999999999999876543222110 156788999999
Q ss_pred HHcCcEEEEeeeeeccCCeeEEEEEE--------EcccCCCCCCccccccccccCCCCce----------------EE--
Q psy17819 85 KEKEIFLVGGSIPELDNDKVYNAATV--------HLFDIAIPGGITFKESDVLSPGNSFS----------------MF-- 138 (272)
Q Consensus 85 ~~~~~~iv~Gs~~~~~~~~~yns~~v--------~~~~~~~p~~~~~~e~~~~~~G~~~~----------------v~-- 138 (272)
++++++|++| ++++.++++||++++ .+.|.++|.+..|.|.++|.||+... +|
T Consensus 86 ~~~~i~ivvG-~p~~~~~~lyNsa~vi~~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~ 164 (680)
T 3sdb_A 86 ADLLPVLVVG-APLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAA 164 (680)
T ss_dssp TTCSSEEEEE-EEEEETTEEEEEEEEEETTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEE
T ss_pred hcCCcEEEEe-ceEEeCCCceEEEEEEeCCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEee
Confidence 9999999999 788889999999988 45677888888889999999998752 45
Q ss_pred -eeCCceEEEEeecCCCChHHH-HHHHHcCCcEEEeccccCCCCCchh-HHHHHHHHhhhCc-eEEEEEcCCcCCCCCcc
Q psy17819 139 -NNGICNIGLGICYDMRFPELA-QVYRKKGCDLLIYPGAFNMTTGPLH-WELLVRSRANDNQ-VYVAACSPAQDKNSDYI 214 (272)
Q Consensus 139 -~~~~~~igv~IC~D~~~pe~~-~~~~~~ga~lil~p~~~~~~~~~~~-~~~~~~~ra~en~-~~vv~~n~~g~~~~~~~ 214 (272)
++++++||+.||||++||+.. +.++.+||++|++|++|+...++.+ |..+++.++.+.+ ++|+.+|..|.+.+++.
T Consensus 165 ~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~~~~l~ 244 (680)
T 3sdb_A 165 SDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLA 244 (680)
T ss_dssp TTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSCCSSCC
T ss_pred eccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCcccCCCCeE
Confidence 688999999999999999996 8899999999999999988766644 4567777766654 55554555665557889
Q ss_pred ceeeeEEECCCCceeeeCC-C--CceEEEEEechhHHHHhhhcCCCCCCcc
Q psy17819 215 AWGHSTVVDPWANILATSQ-F--EETIVYADIDLNTLNKVRDQIPTGKQKR 262 (272)
Q Consensus 215 ~~G~S~i~~p~G~~~~~~~-~--~~~~~~~~id~~~~~~~r~~~~~~~~~~ 262 (272)
|.|.|+|+ |+|+++++.+ . ++++++++||++.+++.|..++++++++
T Consensus 245 f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~ 294 (680)
T 3sdb_A 245 WDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNR 294 (680)
T ss_dssp CCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_pred EeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhh
Confidence 99999999 9999999986 3 8999999999999999998888776655
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=84.14 E-value=5 Score=33.08 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=43.5
Q ss_pred HHHHHHHcCCcEEEeccccCCCCCch------------hHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCC
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNMTTGPL------------HWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPW 225 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~~~~~~------------~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~ 225 (272)
+.+.++.+|||+|+.|-.+....... .+....+..|.+++++++.-... . ..+-.++-.+.+++|+
T Consensus 45 ~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~-~~~~~~yNs~~~i~~~ 122 (283)
T 3hkx_A 45 AAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPG-P-EGPEQRGITAELADEH 122 (283)
T ss_dssp HHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCBC-S-SCTTTCCBEEEEECTT
T ss_pred HHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEEE-E-cCCCCEEEEEEEEcCC
Confidence 34455677999999997643211111 22344556788899988854321 1 1112345578888999
Q ss_pred Cceeee
Q psy17819 226 ANILAT 231 (272)
Q Consensus 226 G~~~~~ 231 (272)
|+++..
T Consensus 123 G~i~~~ 128 (283)
T 3hkx_A 123 GEVLAS 128 (283)
T ss_dssp SCEEEE
T ss_pred CcEEEE
Confidence 998743
No 17
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=80.85 E-value=6.8 Score=34.23 Aligned_cols=73 Identities=12% Similarity=0.212 Sum_probs=43.0
Q ss_pred HHHHHHHcCCcEEEeccccCCCCC-----------------chhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeE
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNMTTG-----------------PLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHST 220 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~~~~-----------------~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~ 220 (272)
+.+.++.+|||+|+.|-.+..... ...+....+..|.+++++++.....-....+-.++-.+.
T Consensus 104 li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~ 183 (405)
T 2vhh_A 104 MIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAV 183 (405)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEE
T ss_pred HHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEE
Confidence 445556789999999976432110 011234456678899998885321100001223556778
Q ss_pred EECCCCceee
Q psy17819 221 VVDPWANILA 230 (272)
Q Consensus 221 i~~p~G~~~~ 230 (272)
+++|+|+++.
T Consensus 184 vi~p~G~i~~ 193 (405)
T 2vhh_A 184 VISNSGRYLG 193 (405)
T ss_dssp EECTTSCEEE
T ss_pred EECCCCeEEE
Confidence 8899998764
No 18
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=80.55 E-value=3.7 Score=33.84 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=42.1
Q ss_pred HHHHHHcCCcEEEeccccCCCCCc-----------hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCc
Q psy17819 159 AQVYRKKGCDLLIYPGAFNMTTGP-----------LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWAN 227 (272)
Q Consensus 159 ~~~~~~~ga~lil~p~~~~~~~~~-----------~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~ 227 (272)
.+.++.+|||+|+.|-.+...... ..+....+..|.+++++++.-...-. .++ .++-.+.+++|+|+
T Consensus 46 i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G~~~~~-~~~-~~yNs~~~i~~~G~ 123 (281)
T 3p8k_A 46 FEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNI-RNN-QIFNTAFSVNKSGQ 123 (281)
T ss_dssp HHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEEEEEEE-ETT-EEEEEEEEECTTSC
T ss_pred HHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEeeeEEc-cCC-cEEEEEEEEcCCCe
Confidence 344456799999999764331111 22344556678888988775421111 112 34567888899999
Q ss_pred eee
Q psy17819 228 ILA 230 (272)
Q Consensus 228 ~~~ 230 (272)
++.
T Consensus 124 i~~ 126 (281)
T 3p8k_A 124 LIN 126 (281)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 19
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=77.88 E-value=9.1 Score=31.74 Aligned_cols=73 Identities=15% Similarity=0.044 Sum_probs=47.2
Q ss_pred cEEEEEeeccC------CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHc
Q psy17819 14 FKIALVQMTVG------KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEK 87 (272)
Q Consensus 14 iria~~Q~~~~------~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 87 (272)
++|..++.... ...+...+.+.+.++.|.+-|++.|++|-.. .....+.+.. . .+.+..+.+.|+++
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~-~~~~~~~~~~----~--~~~l~~l~~~a~~~ 162 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLP-RIENEDDAKV----V--SEIFNRAGEITKKA 162 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CCSSHHHHHH----H--HHHHHHHHHHHHTT
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCC-CCCCHHHHHH----H--HHHHHHHHHHHHHc
Confidence 67776665531 2346678889999999999999999998321 1111111111 1 34567777888889
Q ss_pred CcEEEE
Q psy17819 88 EIFLVG 93 (272)
Q Consensus 88 ~~~iv~ 93 (272)
++.+.+
T Consensus 163 Gv~l~l 168 (305)
T 3obe_A 163 GILWGY 168 (305)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 988765
No 20
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=76.71 E-value=6.6 Score=32.31 Aligned_cols=73 Identities=10% Similarity=0.156 Sum_probs=42.8
Q ss_pred HHHHH--HHcCCcEEEeccccCCCCCc---------------hhHHHHHHHHhhhCceEEEEEcCCcCCCC-Cccceeee
Q psy17819 158 LAQVY--RKKGCDLLIYPGAFNMTTGP---------------LHWELLVRSRANDNQVYVAACSPAQDKNS-DYIAWGHS 219 (272)
Q Consensus 158 ~~~~~--~~~ga~lil~p~~~~~~~~~---------------~~~~~~~~~ra~en~~~vv~~n~~g~~~~-~~~~~G~S 219 (272)
+.+.+ +.+|+|+|+.|-.+...... ..+....+..|.+++++++.-.. ....+ +-.++-.+
T Consensus 35 ~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~-~~~~~~~~~~yNs~ 113 (291)
T 1f89_A 35 FIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTI-PELDPKTDKIYNTS 113 (291)
T ss_dssp HHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEECCCE-EEECTTTCCEEEEE
T ss_pred HHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEecee-ecccCCCCceEEEE
Confidence 33444 56799999999764421111 22344556678899988874321 11111 12345677
Q ss_pred EEECCCCceeee
Q psy17819 220 TVVDPWANILAT 231 (272)
Q Consensus 220 ~i~~p~G~~~~~ 231 (272)
.+++|+|+++..
T Consensus 114 ~~i~~~G~i~~~ 125 (291)
T 1f89_A 114 IIFNEDGKLIDK 125 (291)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCcEEeE
Confidence 888999997643
No 21
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=75.74 E-value=6.1 Score=32.02 Aligned_cols=70 Identities=21% Similarity=0.375 Sum_probs=41.5
Q ss_pred HHHHHHHcCCcEEEeccccCC--CCC-c------------hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEE
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNM--TTG-P------------LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVV 222 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~--~~~-~------------~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~ 222 (272)
+.+.++.+|+|+++.|-.+.. ... . ..+....+..|.+++++++.... ... +-.++-.+.++
T Consensus 26 ~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G~~--~~~-~~~~yNs~~~i 102 (262)
T 3ivz_A 26 LIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAGTA--EKD-GDVLYNSAVVV 102 (262)
T ss_dssp HHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEEEE--EEE-TTEEEEEEEEE
T ss_pred HHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEeEE--Eee-CCcEEEEEEEE
Confidence 344456789999999975432 111 0 12334556678888888875421 111 22345667888
Q ss_pred CCCCceeee
Q psy17819 223 DPWANILAT 231 (272)
Q Consensus 223 ~p~G~~~~~ 231 (272)
+|+| ++..
T Consensus 103 ~~~G-~~~~ 110 (262)
T 3ivz_A 103 GPRG-FIGK 110 (262)
T ss_dssp ETTE-EEEE
T ss_pred cCCe-eEEE
Confidence 8999 6543
No 22
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=74.07 E-value=7.7 Score=31.65 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=41.7
Q ss_pred HHHHHHHcCCcEEEeccccCCCCCc-----------hhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCC
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNMTTGP-----------LHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWA 226 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~~~~~-----------~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G 226 (272)
+.+.++.+|+|+|+.|-.+...... ..+....+..|.+++++++.-.. .... +-.++-.+.+++|+|
T Consensus 27 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~-~~~~-~~~~yNs~~~i~~~G 104 (276)
T 2w1v_A 27 LVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLIGGSI-PEED-AGKLYNTCSVFGPDG 104 (276)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEECCCE-EEEE-TTEEEEEEEEECTTS
T ss_pred HHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEEecce-eecC-CCcEEEEEEEECCCC
Confidence 3444567899999999764321111 12334555678888888874211 1101 123456678889999
Q ss_pred ceee
Q psy17819 227 NILA 230 (272)
Q Consensus 227 ~~~~ 230 (272)
+++.
T Consensus 105 ~i~~ 108 (276)
T 2w1v_A 105 SLLV 108 (276)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 8764
No 23
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=73.91 E-value=11 Score=33.10 Aligned_cols=74 Identities=14% Similarity=0.261 Sum_probs=43.2
Q ss_pred HHHHHHHcCCcEEEeccccCCCCC-ch-----------hHHHHHHHHhhhCceEEEEEcCCc-CCCCCccceeeeEEECC
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNMTTG-PL-----------HWELLVRSRANDNQVYVAACSPAQ-DKNSDYIAWGHSTVVDP 224 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~~~~-~~-----------~~~~~~~~ra~en~~~vv~~n~~g-~~~~~~~~~G~S~i~~p 224 (272)
+.+.++.+|||+|+.|-.+..... .. .+....+..|.+++++++.-.... ....+-.++-.+.+++|
T Consensus 38 li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~ 117 (440)
T 1ems_A 38 MIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDS 117 (440)
T ss_dssp HHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred HHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEeccccccccCCCCcEEEEEEEECC
Confidence 444556789999999977543211 11 122344556889999887542210 10111234556788899
Q ss_pred CCceeee
Q psy17819 225 WANILAT 231 (272)
Q Consensus 225 ~G~~~~~ 231 (272)
+|+++..
T Consensus 118 ~G~i~~~ 124 (440)
T 1ems_A 118 DGVTRAE 124 (440)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9987653
No 24
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=72.65 E-value=15 Score=31.07 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=39.2
Q ss_pred cCCcEEEeccccCCC--CC-----------chhHHHHHHHHhhhCceEEEEEcCCcCCCCCc-cceeeeEEECCCCceee
Q psy17819 165 KGCDLLIYPGAFNMT--TG-----------PLHWELLVRSRANDNQVYVAACSPAQDKNSDY-IAWGHSTVVDPWANILA 230 (272)
Q Consensus 165 ~ga~lil~p~~~~~~--~~-----------~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~-~~~G~S~i~~p~G~~~~ 230 (272)
+|+|+|+.|-.+... .. ...+....+..|.+++++++.... ....++. .++-...+++|+|+++.
T Consensus 51 ~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~-e~~~~~~~~~yNsa~vi~p~G~i~~ 129 (334)
T 2dyu_A 51 PGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVFSIM-ERNPDSNKNPYNTAIIIDPQGEIIL 129 (334)
T ss_dssp TTEEEEECCTTTTTCCCTTTTTSGGGCBCSSSHHHHHHHHHHHHHTCEEEEEEE-ECCSSTTSCCEEEEEEECTTSCEEE
T ss_pred CCCcEEEcCCCccccCCCChhHHHHhhccCCCHHHHHHHHHHHHhCeEEEEeeE-EECCCCCceeEEEEEEECCCCCEEE
Confidence 699999999653321 11 012344556678888888876432 1111121 14567888899999764
Q ss_pred e
Q psy17819 231 T 231 (272)
Q Consensus 231 ~ 231 (272)
.
T Consensus 130 ~ 130 (334)
T 2dyu_A 130 K 130 (334)
T ss_dssp E
T ss_pred E
Confidence 3
No 25
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=70.58 E-value=33 Score=27.40 Aligned_cols=76 Identities=9% Similarity=-0.042 Sum_probs=46.7
Q ss_pred cEEEEEeecc-------------CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHH
Q psy17819 14 FKIALVQMTV-------------GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTL 80 (272)
Q Consensus 14 iria~~Q~~~-------------~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l 80 (272)
+++..++.+. +...+..++.+++.++.|.+-|++.|++.=....+...+... ... .+.++.+
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~---~~~--~~~l~~l 136 (269)
T 3ngf_A 62 LTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSGITEGLDRKACE---ETF--IENFRYA 136 (269)
T ss_dssp CEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHH---HHH--HHHHHHH
T ss_pred CcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHH---HHH--HHHHHHH
Confidence 6777766432 123467888999999999999999988732211111111111 111 3456677
Q ss_pred HHHHHHcCcEEEEe
Q psy17819 81 SNVAKEKEIFLVGG 94 (272)
Q Consensus 81 ~~~a~~~~~~iv~G 94 (272)
.+.|+++++.+.+=
T Consensus 137 ~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 137 ADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHGGGTCEEEEC
T ss_pred HHHHHHcCCEEEEe
Confidence 77888889876554
No 26
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=68.97 E-value=40 Score=26.53 Aligned_cols=63 Identities=3% Similarity=-0.097 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEeC-CCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 27 KNKNLENAVRFIRKAADNGASLIVLP-ECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 27 ~~~n~~~~~~~i~~A~~~~~dlvvfP-E~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
.+..++.+.+.++.|.+-|++.|++. -....++..+... ... .+.++.+.+.|+++++.+.+=
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~---~~~--~~~l~~l~~~a~~~gv~l~~E 143 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYR---AVF--IDNIRYAADRFAPHGKRILVE 143 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHH---HHH--HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHH---HHH--HHHHHHHHHHHHHcCCEEEEE
Confidence 46788899999999999999999873 2111111111111 111 345667777888888876553
No 27
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=68.55 E-value=19 Score=30.50 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=39.0
Q ss_pred cCCcEEEeccccCCC--CCc-----------hhHHHHHHHHhhhCceEEEEEcCCcCCCC---CccceeeeEEECCCCce
Q psy17819 165 KGCDLLIYPGAFNMT--TGP-----------LHWELLVRSRANDNQVYVAACSPAQDKNS---DYIAWGHSTVVDPWANI 228 (272)
Q Consensus 165 ~ga~lil~p~~~~~~--~~~-----------~~~~~~~~~ra~en~~~vv~~n~~g~~~~---~~~~~G~S~i~~p~G~~ 228 (272)
+|+|+|+.|-.+... ... ..+....+..|.+++++++... .|.... +..++-.+.+++|+|++
T Consensus 50 ~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~-~ge~~~~~~~~~~yNsa~vi~p~G~i 128 (341)
T 2uxy_A 50 PGMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSL-TGERHEEHPRKAPYNTLVLIDNNGEI 128 (341)
T ss_dssp TTEEEEECCTTTTTBCCCSHHHHHHHCBCSSSHHHHHHHHHHHHHTCEEEEEE-EEECCTTTTSSCCEEEEEEECTTSCE
T ss_pred CCCcEEEeCCCcccccCCCHHHHHHHhccCCCHHHHHHHHHHHHhCcEEEEEe-eeeEcCCCCCCceEEEEEEECCCCcE
Confidence 699999999764321 111 1223345566788888877532 222111 12256678889999997
Q ss_pred eee
Q psy17819 229 LAT 231 (272)
Q Consensus 229 ~~~ 231 (272)
+..
T Consensus 129 ~~~ 131 (341)
T 2uxy_A 129 VQK 131 (341)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 28
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=67.68 E-value=11 Score=31.07 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=41.4
Q ss_pred HHHHHHHcCCcEEEeccccCCC--CC-----------------chhHHHHHHHHhhhCceEEEEEcCCcCCCCC--ccce
Q psy17819 158 LAQVYRKKGCDLLIYPGAFNMT--TG-----------------PLHWELLVRSRANDNQVYVAACSPAQDKNSD--YIAW 216 (272)
Q Consensus 158 ~~~~~~~~ga~lil~p~~~~~~--~~-----------------~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~--~~~~ 216 (272)
+.+.++.+|||+|+.|-.+... .. ...+....+..|.+++++++.-... ...++ ..++
T Consensus 30 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~-~~~~~~~~~~y 108 (303)
T 1uf5_A 30 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAE-LVVEGGVKRRF 108 (303)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEEEEEE-EEEETTEEEEE
T ss_pred HHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEEeeeE-ecCCCCCccee
Confidence 3444556799999999653321 10 0122344556788888888754211 00111 1345
Q ss_pred eeeEEECCCCceee
Q psy17819 217 GHSTVVDPWANILA 230 (272)
Q Consensus 217 G~S~i~~p~G~~~~ 230 (272)
-.+.+++|+|+++.
T Consensus 109 Ns~~~i~~~G~i~~ 122 (303)
T 1uf5_A 109 NTSILVDKSGKIVG 122 (303)
T ss_dssp EEEEEECTTSCEEE
T ss_pred eEEEEECCCCCEee
Confidence 66788899998764
No 29
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=63.30 E-value=12 Score=30.32 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=38.3
Q ss_pred HcCCcEEEeccccCCC--CC--------chhHHHHHHHHhhhCceEEEEEcCCcCCCCCccceeeeEEECCCCcee
Q psy17819 164 KKGCDLLIYPGAFNMT--TG--------PLHWELLVRSRANDNQVYVAACSPAQDKNSDYIAWGHSTVVDPWANIL 229 (272)
Q Consensus 164 ~~ga~lil~p~~~~~~--~~--------~~~~~~~~~~ra~en~~~vv~~n~~g~~~~~~~~~G~S~i~~p~G~~~ 229 (272)
.+|+|+|+.|-.+... .. ...+....+..|.+++++++.....- .++ .++-.+.+++|+|+++
T Consensus 33 ~~gadlvv~PE~~~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~G~~~~--~~~-~~yNs~~~i~~~G~i~ 105 (266)
T 2e11_A 33 AGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGSVQLR--TEH-GVFNRLLWATPDGALQ 105 (266)
T ss_dssp TTTCSEEECCTTTTTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEEEEEEE--ETT-EEEEEEEEECTTSCEE
T ss_pred cCCCCEEECCCCccccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEEeeeEc--cCC-cEEEEEEEECCCCCEE
Confidence 4689999999754321 11 01233455666888898887543211 112 3456678889999876
No 30
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=62.33 E-value=20 Score=29.22 Aligned_cols=63 Identities=21% Similarity=0.107 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|++.|+++=... +......+..... .+.++.+.+.|+++++.+.+=
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~--~~~~~~~~~~~~~--~~~l~~l~~~a~~~Gv~l~lE 166 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGYDV--YYQEANNETRRRF--RDGLKESVEMASRAQVTLAME 166 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCSC--SSSCCCHHHHHHH--HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCC--CcCcCHHHHHHHH--HHHHHHHHHHHHHhCCEEEEe
Confidence 45678888999999999999999972211 1111001001111 345667777888889876554
No 31
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=59.39 E-value=24 Score=28.50 Aligned_cols=62 Identities=11% Similarity=-0.045 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 27 KNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 27 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
.+..++.+.+.++.|.+-|++.|++.- |+.+....+..... .+.++.+.+.|+++++.+.+=
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~----G~~~~~~~~~~~~~--~~~l~~l~~~a~~~Gv~l~lE 158 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHI----GFVPESSSPDYSEL--VRVTQDLLTHAANHGQAVHLE 158 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECC----CCCCCTTSHHHHHH--HHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC----CCCcccchHHHHHH--HHHHHHHHHHHHHcCCEEEEe
Confidence 467889999999999999999988742 22221100000111 345677777888889886665
No 32
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=58.20 E-value=53 Score=26.31 Aligned_cols=77 Identities=10% Similarity=0.065 Sum_probs=46.7
Q ss_pred ccEEEEEeecc----CCCHHHHHHHHHHHHHHHHHCCCcEEEe-CCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHc
Q psy17819 13 SFKIALVQMTV----GKDKNKNLENAVRFIRKAADNGASLIVL-PECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEK 87 (272)
Q Consensus 13 ~iria~~Q~~~----~~~~~~n~~~~~~~i~~A~~~~~dlvvf-PE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 87 (272)
.+++..+.... +...+..++.+.+.++.|.+-|++.|++ |-....+...+... ... .+.++.+.+.|+++
T Consensus 61 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~---~~~--~~~l~~l~~~a~~~ 135 (286)
T 3dx5_A 61 TLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQER---QEY--VNRIRMICELFAQH 135 (286)
T ss_dssp TCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHH---HHH--HHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHH---HHH--HHHHHHHHHHHHHh
Confidence 36676665432 3456788999999999999999998855 43221111111100 111 34567777888888
Q ss_pred CcEEEEe
Q psy17819 88 EIFLVGG 94 (272)
Q Consensus 88 ~~~iv~G 94 (272)
++.+.+=
T Consensus 136 Gv~l~lE 142 (286)
T 3dx5_A 136 NMYVLLE 142 (286)
T ss_dssp TCEEEEE
T ss_pred CCEEEEe
Confidence 9875544
No 33
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=57.68 E-value=62 Score=26.46 Aligned_cols=59 Identities=15% Similarity=-0.012 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcE--EEE
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIF--LVG 93 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~--iv~ 93 (272)
+...+.+.+.++.|.+-|++.|+.|-... ....+.+.. . .+.++.+.+.|+++++. +.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~-~~~~~~~~~----~--~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQPMMPT-ITTHDEAKL----V--CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCC-CCSHHHHHH----H--HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCC-CCCHHHHHH----H--HHHHHHHHHHHHHCCCcceEEE
Confidence 67788899999999999999999984211 111111111 1 34567778888899987 654
No 34
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=57.39 E-value=39 Score=25.21 Aligned_cols=77 Identities=12% Similarity=0.035 Sum_probs=45.5
Q ss_pred cEEEEEeecc---C-----CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHH
Q psy17819 14 FKIALVQMTV---G-----KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAK 85 (272)
Q Consensus 14 iria~~Q~~~---~-----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~ 85 (272)
..+.++++.+ . .+.+...+.+.++++.+.+.++.+++.--.................+ ..+-+.++++|+
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~--~~~n~~l~~~a~ 152 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKV--IQLNKWIKEYAD 152 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHH--HHHHHHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHH--HHHHHHHHHHHH
Confidence 5677777742 1 26677788888888888888999887732211111000000011112 456678889999
Q ss_pred HcCcEEE
Q psy17819 86 EKEIFLV 92 (272)
Q Consensus 86 ~~~~~iv 92 (272)
++++.++
T Consensus 153 ~~~v~~i 159 (204)
T 3p94_A 153 KNGLTYV 159 (204)
T ss_dssp HTTCEEE
T ss_pred HcCCcEE
Confidence 9887643
No 35
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=54.41 E-value=37 Score=26.79 Aligned_cols=65 Identities=14% Similarity=0.007 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|++.|++.-....+..+....+..... .+.++.+.+.|+++++.+.+=
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~gv~l~lE 136 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPL--AEALGLVVRRARTLGVRLLLE 136 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHH--HHHTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHH--HHHHHHHHHHHhhcCCEEEEc
Confidence 45678889999999999999887643222211100111101111 234456667777888875543
No 36
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=53.21 E-value=46 Score=26.72 Aligned_cols=57 Identities=9% Similarity=-0.085 Sum_probs=37.0
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEe--cccc-CCCCCchhHHHHHHHHhhhCceEEEEE
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIY--PGAF-NMTTGPLHWELLVRSRANDNQVYVAAC 203 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~--p~~~-~~~~~~~~~~~~~~~ra~en~~~vv~~ 203 (272)
.|++|-|.. +++...+..+|||+|+. |..| ........+......+.++|++.+..+
T Consensus 37 ~I~~~lD~t-~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTAS-QALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEECC-HHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHhCCCCEEEECCchhccCCCccccchHHHHHHHHHHCCCEEEEe
Confidence 677777764 56788888899999994 7766 332222223334445677888777653
No 37
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=53.17 E-value=35 Score=25.63 Aligned_cols=59 Identities=7% Similarity=0.122 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEe-CCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEE
Q psy17819 27 KNKNLENAVRFIRKAADNGASLIVL-PECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFL 91 (272)
Q Consensus 27 ~~~n~~~~~~~i~~A~~~~~dlvvf-PE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 91 (272)
.+...+.+.++++.+.+.++.++++ |=....... .. ....+ ..+.+.++++|+++++.+
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~~~~-~~---~~~~~--~~~n~~~~~~a~~~~~~~ 171 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEPNRS-DP---MRKTV--DAYIEAMRDVAASEHVPF 171 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCCCTT-SH---HHHHH--HHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCCCcc-hH---HHHHH--HHHHHHHHHHHHHcCCeE
Confidence 6677778888888887779999888 322111111 11 11222 456788889999987653
No 38
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=52.28 E-value=20 Score=28.27 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=27.6
Q ss_pred cccEEEEEeecc--CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCC
Q psy17819 12 KSFKIALVQMTV--GKDKNKNLENAVRFIRKAADNGASLIVLPECF 55 (272)
Q Consensus 12 ~~iria~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 55 (272)
++|||+.....- ..+....++++.+.+++ .++|+|+|.|..
T Consensus 2 ~~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~~---~~~DIi~LQEv~ 44 (266)
T 3teb_A 2 NAMKILTVNVHAWLEENQMEKIDILARTIAE---KQYDVIAMQEVN 44 (266)
T ss_dssp -CEEEEEEECCTTCSTTHHHHHHHHHHHHHH---HTCSEEEEEEEE
T ss_pred CceEEEEEecccccCcchhHHHHHHHHHHHh---cCCCEEEEEEcc
Confidence 357887777652 23455566666666654 589999999985
No 39
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=51.56 E-value=32 Score=29.77 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEe----CCCCCCCCC--cc-------hhhhhhh--hcCCChHHHHHHHHHHHcCcE
Q psy17819 26 DKNKNLENAVRFIRKAADNGASLIVL----PECFNCPYG--TK-------YFREYSE--EIGSGITSKTLSNVAKEKEIF 90 (272)
Q Consensus 26 ~~~~n~~~~~~~i~~A~~~~~dlvvf----PE~~~~g~~--~~-------~~~~~~~--~~~~~~~~~~l~~~a~~~~~~ 90 (272)
+-...+++..++++.|++.|||.|=| |+..++.+. .. .+.+.-. .++ .+.+..|.+.|++.|+.
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~-~e~~~~L~~~~~~~Gi~ 116 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMP-AEWILPLLDYCREKQVI 116 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSC-GGGHHHHHHHHHHTTCE
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCC-HHHHHHHHHHHHHcCCc
Confidence 45567889999999999999999988 444323332 10 1111111 245 78999999999999998
Q ss_pred EEEe
Q psy17819 91 LVGG 94 (272)
Q Consensus 91 iv~G 94 (272)
++.-
T Consensus 117 ~~st 120 (385)
T 1vli_A 117 FLST 120 (385)
T ss_dssp EECB
T ss_pred EEEc
Confidence 7766
No 40
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=51.40 E-value=23 Score=27.08 Aligned_cols=39 Identities=8% Similarity=0.139 Sum_probs=25.7
Q ss_pred ccEEEEEeec-cC-CCHHHHHHHHHHHHHHHHHCCCcEEEeCCC
Q psy17819 13 SFKIALVQMT-VG-KDKNKNLENAVRFIRKAADNGASLIVLPEC 54 (272)
Q Consensus 13 ~iria~~Q~~-~~-~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 54 (272)
+|||.....+ .. .+.....+.+.+.+++ .+||+|+|.|.
T Consensus 3 ~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~~---~~pDIi~LQEv 43 (250)
T 4f1h_A 3 KLSIISWNVDGLDTLNLADRARGLCSYLAL---YTPDVVFLQEL 43 (250)
T ss_dssp CEEEEEEECCTTCCTTHHHHHHHHHHHHHH---HCCSEEEEEEE
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHHH---cCCCEEEEEeC
Confidence 5777777665 22 3445555555555544 58999999995
No 41
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=48.79 E-value=45 Score=27.66 Aligned_cols=64 Identities=19% Similarity=0.122 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcc--hhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTK--YFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~--~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
..|++.+.+.++.+.+.|.+++=+.--.+.-|... .+. . .+.. .+..+.++++++++++.+++.
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~-~-~~~~-~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYD-W-EGAY-EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSC-H-HHHH-HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCC-c-CCCC-HHHHHHHHHHHHHcCCeEEEe
Confidence 67999999999999999988876632222222111 111 1 1122 356788899999999876554
No 42
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=48.09 E-value=12 Score=31.95 Aligned_cols=67 Identities=12% Similarity=0.172 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEeCCCC----CCCCC----cc-------hhhhhhhhcCCChHHHHHHHHHHHcCcE
Q psy17819 26 DKNKNLENAVRFIRKAADNGASLIVLPECF----NCPYG----TK-------YFREYSEEIGSGITSKTLSNVAKEKEIF 90 (272)
Q Consensus 26 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~----~~g~~----~~-------~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 90 (272)
+-.+.+++..++++.|++.|+|.|=|.-+- ++.+. .. ++.+.. .++ .+.+..|.+.|++.|+.
T Consensus 29 NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~-~l~-~e~~~~L~~~~~~~Gi~ 106 (349)
T 2wqp_A 29 NHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERC-ALN-EEDEIKLKEYVESKGMI 106 (349)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHH-CCC-HHHHHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHh-CCC-HHHHHHHHHHHHHhCCe
Confidence 345678899999999999999999884222 12211 10 111111 244 78999999999999998
Q ss_pred EEEe
Q psy17819 91 LVGG 94 (272)
Q Consensus 91 iv~G 94 (272)
++.-
T Consensus 107 ~~st 110 (349)
T 2wqp_A 107 FIST 110 (349)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7776
No 43
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=47.50 E-value=56 Score=26.12 Aligned_cols=56 Identities=11% Similarity=-0.025 Sum_probs=37.1
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEe--ccccCCCCC-chhHHHHHHHHhhhCceEEEEE
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIY--PGAFNMTTG-PLHWELLVRSRANDNQVYVAAC 203 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~--p~~~~~~~~-~~~~~~~~~~ra~en~~~vv~~ 203 (272)
.|++|-|.. +++...+..+|||+|+. |..| .... ...+......+.++|++.+..+
T Consensus 38 ~I~~alD~t-~~vi~eAi~~~adlIitHHp~~f-~~~~~~~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 38 KVGAAVDAG-EAIFRKALEEEVDFLIVHHGLFW-GKPFPIVGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp CEEEEEECS-HHHHHHHHHTTCSEEEEEECSCS-SCCCCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcCc-CcccccccHHHHHHHHHHHCCCeEEEe
Confidence 567777754 66778888899999994 7766 3322 2334444455677888777753
No 44
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=47.27 E-value=58 Score=26.53 Aligned_cols=65 Identities=11% Similarity=-0.145 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCc-c--hhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGT-K--YFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~-~--~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|+..|+.|=++..|..+ . ...+..... .+.++.+.+.|+++++.+.+=
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG--VEGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH--HHHHHHHHHHHHHcCCEEEEe
Confidence 5677889999999999999999865322112211 1 111111111 345667777888888875554
No 45
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=46.77 E-value=33 Score=29.45 Aligned_cols=60 Identities=5% Similarity=0.050 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCc--chhhhhhhhcCCChHHHHHHHHHHHcCcE
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGT--KYFREYSEEIGSGITSKTLSNVAKEKEIF 90 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 90 (272)
+.|.+.+.+.++...+.|..++||||..=+--.+ ..+ ...+.. ....+.+..+|.+.++.
T Consensus 206 r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l--~~~~Fk-~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 206 KANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEW--YPAPFD-ASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCB--CCCCCC-HHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcc--cccccc-chhhhHHHHHHHHcCCC
Confidence 4556666666666566688999999986331100 000 011122 44677888999998776
No 46
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=46.52 E-value=30 Score=26.82 Aligned_cols=40 Identities=8% Similarity=0.272 Sum_probs=24.8
Q ss_pred ccEEEEEeec-c-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCC
Q psy17819 13 SFKIALVQMT-V-GKDKNKNLENAVRFIRKAADNGASLIVLPECF 55 (272)
Q Consensus 13 ~iria~~Q~~-~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 55 (272)
+|||.....+ . ..+.....+.+.+++++ .+||||+|.|..
T Consensus 13 ~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~~---~~pDIi~LQEv~ 54 (256)
T 4fva_A 13 EVSVMSWNIDGLDGRSLLTRMKAVAHIVKN---VNPDILFLQEVV 54 (256)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHHH---HCCSEEEEEEEC
T ss_pred EEEEEEEecCCCCCcCHHHHHHHHHHHHHH---cCCCEEEEEecC
Confidence 3666666654 2 23444555555555544 589999999964
No 47
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=45.90 E-value=22 Score=28.31 Aligned_cols=37 Identities=14% Similarity=0.339 Sum_probs=21.6
Q ss_pred ccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCC
Q psy17819 13 SFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECF 55 (272)
Q Consensus 13 ~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 55 (272)
+|||+-+..+ +- ....+++.+.++ +.++|+|++.|.-
T Consensus 7 ~mki~s~Nvn--~~-r~~~~~l~~~l~---~~~~DIl~LQEt~ 43 (240)
T 2ei9_A 7 RLRIGQINLG--GA-EDATRELPSIAR---DLGLDIVLVQEQY 43 (240)
T ss_dssp EEEEEEEECT--TC-HHHHHTHHHHHH---HHTCSEEEEESCC
T ss_pred cceEEEEecC--cc-HHHHHHHHHHHH---HcCCCEEEeecce
Confidence 4565544444 32 223344444444 4699999999973
No 48
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=45.58 E-value=37 Score=26.01 Aligned_cols=41 Identities=10% Similarity=0.116 Sum_probs=23.8
Q ss_pred ccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCC
Q psy17819 13 SFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNC 57 (272)
Q Consensus 13 ~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~ 57 (272)
++||.....+-... ....+.+.+.++ +.++|+|++.|.-..
T Consensus 7 ~lri~t~Nv~g~~~-~~~~~~~~~~i~---~~~~DIv~LQE~~~~ 47 (238)
T 1vyb_A 7 HITILTLNINGLNS-AIKRHRLASWIK---SQDPSVCCIQETHLT 47 (238)
T ss_dssp CEEEEEEECSCCCS-HHHHHHHHHHHH---HHCCSEEEEECCCCC
T ss_pred cceEEEEecccCCc-hhhHHHHHHHHH---HcCCCEEEEecccCC
Confidence 57776666652222 122234444444 458999999998643
No 49
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=44.90 E-value=47 Score=26.32 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=44.2
Q ss_pred cEEEEEeecc--C-CCH---HHHHHHHHHHHHHHHHCCCcEEEe-CCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHH
Q psy17819 14 FKIALVQMTV--G-KDK---NKNLENAVRFIRKAADNGASLIVL-PECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKE 86 (272)
Q Consensus 14 iria~~Q~~~--~-~~~---~~n~~~~~~~i~~A~~~~~dlvvf-PE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 86 (272)
+++..++... . .+. +..++.+.+.++.|.+-|++.|++ |-....++..+... ... .+.++.+.+.|++
T Consensus 60 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~---~~~--~~~l~~l~~~a~~ 134 (278)
T 1i60_A 60 IKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIK---KSS--VDVLTELSDIAEP 134 (278)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHH---HHH--HHHHHHHHHHHGG
T ss_pred CCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHH---HHH--HHHHHHHHHHHHh
Confidence 6776665542 1 232 456788899999999999998877 22111111111111 111 3455677778888
Q ss_pred cCcEEEEe
Q psy17819 87 KEIFLVGG 94 (272)
Q Consensus 87 ~~~~iv~G 94 (272)
+++.+.+=
T Consensus 135 ~gv~l~lE 142 (278)
T 1i60_A 135 YGVKIALE 142 (278)
T ss_dssp GTCEEEEE
T ss_pred cCCEEEEE
Confidence 88876554
No 50
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=43.56 E-value=76 Score=26.91 Aligned_cols=66 Identities=9% Similarity=-0.056 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCCcEEEeCCCCCCCCCc---chhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeee
Q psy17819 31 LENAVRFIRKAADNGASLIVLPECFNCPYGT---KYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSI 96 (272)
Q Consensus 31 ~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~---~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~ 96 (272)
.++..+.++.+++.|++-||+-.-...|+.. ..........+....++.+.+.|+++|+.+.+|.+
T Consensus 53 ~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 53 EKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecC
Confidence 4455566777777899999997654444331 11111111112267899999999999999999943
No 51
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=42.76 E-value=76 Score=23.16 Aligned_cols=70 Identities=13% Similarity=0.218 Sum_probs=43.3
Q ss_pred cEEEEEeecc-----CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcC
Q psy17819 14 FKIALVQMTV-----GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKE 88 (272)
Q Consensus 14 iria~~Q~~~-----~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 88 (272)
..+.++++.. ..+.++..+.+.++++.+.+.++.++++-=...+.+. . ... ..+.+.++++|++++
T Consensus 67 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~~~p~~~~-~------~~~--~~~~~~~~~~a~~~~ 137 (185)
T 3hp4_A 67 PTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEIYIPPNYG-P------RYS--KMFTSSFTQISEDTN 137 (185)
T ss_dssp CSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSTTC-H------HHH--HHHHHHHHHHHHHHC
T ss_pred CCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeCCCCCccc-H------HHH--HHHHHHHHHHHHHcC
Confidence 4566677642 2456777778888888888889998776211111111 1 111 456788899999988
Q ss_pred cEEE
Q psy17819 89 IFLV 92 (272)
Q Consensus 89 ~~iv 92 (272)
+.++
T Consensus 138 ~~~v 141 (185)
T 3hp4_A 138 AHLM 141 (185)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 7744
No 52
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=42.68 E-value=94 Score=25.61 Aligned_cols=65 Identities=14% Similarity=0.080 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcc--h------------hhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTK--Y------------FREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~--~------------~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+..++.+.+.++.|.+-|++.|+-|=.+..|..+. . ..+..... .+.++.+.+.|+++++.+.+
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~Gv~l~l 182 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANA--QPILDKLGEYAEIKKVKLAI 182 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHH--HHHHHHHHHHHHHcCCEEEE
Confidence 45678889999999999999997664322222111 0 11111111 34556677778888887555
Q ss_pred e
Q psy17819 94 G 94 (272)
Q Consensus 94 G 94 (272)
=
T Consensus 183 E 183 (335)
T 2qw5_A 183 E 183 (335)
T ss_dssp C
T ss_pred e
Confidence 3
No 53
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=42.61 E-value=34 Score=26.42 Aligned_cols=39 Identities=8% Similarity=0.168 Sum_probs=25.3
Q ss_pred ccEEEEEeec-c-CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCC
Q psy17819 13 SFKIALVQMT-V-GKDKNKNLENAVRFIRKAADNGASLIVLPEC 54 (272)
Q Consensus 13 ~iria~~Q~~-~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 54 (272)
++||.....+ . ..+.....+.+.+.+++ .+||+|+|.|.
T Consensus 9 ~l~v~swNi~g~~~~~~~~r~~~i~~~i~~---~~pDIi~LQEv 49 (256)
T 4gz1_A 9 TISFITWNIDGLDGCNLPERARGVCSCLAL---YSPDVVFLQEV 49 (256)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHHH---HCCSEEEEEEE
T ss_pred cEEEEEEEcCCCcCcCHHHHHHHHHHHHHH---cCCCEEEEEcC
Confidence 5777777665 2 23444555555555544 58999999995
No 54
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=41.02 E-value=53 Score=26.10 Aligned_cols=76 Identities=9% Similarity=-0.080 Sum_probs=43.5
Q ss_pred cEEEEEeecc--CC---CHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcC
Q psy17819 14 FKIALVQMTV--GK---DKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKE 88 (272)
Q Consensus 14 iria~~Q~~~--~~---~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 88 (272)
+++..+.... .. ..+..++.+++.++.|.+-|++.|+++= .++..... .+..... .+.+..+.+.|++++
T Consensus 61 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~p~~~~~~-~~~~~~~--~~~l~~l~~~a~~~G 135 (281)
T 3u0h_A 61 LVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAFL--WPSMDEEP-VRYISQL--ARRIRQVAVELLPLG 135 (281)
T ss_dssp CEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEEC--CSEESSCH-HHHHHHH--HHHHHHHHHHHGGGT
T ss_pred CceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee--cCCCCCcc-hhhHHHH--HHHHHHHHHHHHHcC
Confidence 6666555542 11 2345667788899999999999998541 11111000 0001111 345566777778889
Q ss_pred cEEEEe
Q psy17819 89 IFLVGG 94 (272)
Q Consensus 89 ~~iv~G 94 (272)
+.+.+=
T Consensus 136 v~l~lE 141 (281)
T 3u0h_A 136 MRVGLE 141 (281)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 886654
No 55
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=40.95 E-value=1e+02 Score=24.95 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=38.2
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEe--ccccCCCCC--chhHHHHHHHHhhhCceEEEEE
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIY--PGAFNMTTG--PLHWELLVRSRANDNQVYVAAC 203 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~--p~~~~~~~~--~~~~~~~~~~ra~en~~~vv~~ 203 (272)
.|++|-|.. +++...+..+|||+|+. |..|..... ...+......+.+++++.+..+
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHHHHHHHCCCeEEEe
Confidence 678888865 66778888899999995 666543221 2333444456678888877754
No 56
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=40.73 E-value=83 Score=27.31 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=40.5
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEe--ccccCCCCC--chhHHHHHHHHhhhCceEEEEE
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIY--PGAFNMTTG--PLHWELLVRSRANDNQVYVAAC 203 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~--p~~~~~~~~--~~~~~~~~~~ra~en~~~vv~~ 203 (272)
+|++|-|.. +++..++..+|||+|+. |..|..... ...+......++++|++.+..+
T Consensus 66 ~Vl~alD~t-~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDVT-EEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSCC-HHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHHHHHHHCCCeEEEe
Confidence 788898864 67888888899999995 666543221 2445555567788888888764
No 57
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=40.73 E-value=16 Score=17.94 Aligned_cols=17 Identities=18% Similarity=0.171 Sum_probs=14.5
Q ss_pred eeeEEECCCCceeeeCC
Q psy17819 217 GHSTVVDPWANILATSQ 233 (272)
Q Consensus 217 G~S~i~~p~G~~~~~~~ 233 (272)
..|.|+|.+|+++.+..
T Consensus 5 ~ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADLG 21 (26)
T ss_pred CCCEEEeCCCCEeeecc
Confidence 56999999999998763
No 58
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=40.68 E-value=63 Score=25.97 Aligned_cols=65 Identities=12% Similarity=-0.029 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEeCCC--CCCCCCcch--------hhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 27 KNKNLENAVRFIRKAADNGASLIVLPEC--FNCPYGTKY--------FREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 27 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~--~~~g~~~~~--------~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
.+..++.+.+.++.|.+-|++.|+++.. +..|..... ..+..... .+.++.+.+.|+++++.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV--CKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH--HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH--HHHHHHHHHHHHHcCCEEEE
Confidence 3456788899999999999999887642 111221000 00001111 34567777888889987554
No 59
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=40.58 E-value=29 Score=27.58 Aligned_cols=42 Identities=14% Similarity=0.156 Sum_probs=23.1
Q ss_pred cccccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCC
Q psy17819 10 TAKSFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNC 57 (272)
Q Consensus 10 m~~~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~ 57 (272)
|+ .|||.....+ ......++ .+++...+.++|+|++.|.-..
T Consensus 1 m~-~l~i~s~Nv~---g~~~~~~~--~l~~~i~~~~~DIv~LQEt~~~ 42 (265)
T 3g91_A 1 MA-VLKIISWNVN---GLRAVHRK--GFLKWFMEEKPDILCLQEIKAA 42 (265)
T ss_dssp -C-EEEEEEEECS---CHHHHHHH--THHHHHHHHCCSEEEEECCCSC
T ss_pred CC-ccEEEEEEcC---Cchhhhhh--hHHHHHHhcCCCEEEEEecccc
Confidence 44 5666665544 22222222 2333334469999999998543
No 60
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=39.63 E-value=72 Score=25.16 Aligned_cols=64 Identities=17% Similarity=0.053 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|++.|+++=...+... ....+..... .+.++.+.+.|+++++.+.+=
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~-~~~~~~~~~~--~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGGS-KNIDAARRMV--VEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTC-CCHHHHHHHH--HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCC-cCHHHHHHHH--HHHHHHHHHHHHHcCCEEEEe
Confidence 567788899999999999998877632221100 0111111111 345677777888888875554
No 61
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=39.52 E-value=94 Score=24.84 Aligned_cols=79 Identities=11% Similarity=0.140 Sum_probs=45.7
Q ss_pred ccEEEEEeeccC-----CC---HHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCc--chhhhhhhhcCCChHHHHHHH
Q psy17819 13 SFKIALVQMTVG-----KD---KNKNLENAVRFIRKAADNGASLIVLPECFNCPYGT--KYFREYSEEIGSGITSKTLSN 82 (272)
Q Consensus 13 ~iria~~Q~~~~-----~~---~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~ 82 (272)
.++|..+..... .+ .+..++.+.+.++.|.+-|++.|+++-.... +.. +...+..... .+.++.+.+
T Consensus 77 gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~--~~~l~~l~~ 153 (287)
T 3kws_A 77 NIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFL--CEQFNEMGT 153 (287)
T ss_dssp SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHH--HHHHHHHHH
T ss_pred CCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHH--HHHHHHHHH
Confidence 367765554321 22 2467788899999999999998887522111 110 0011111111 345677788
Q ss_pred HHHHcCcEEEEe
Q psy17819 83 VAKEKEIFLVGG 94 (272)
Q Consensus 83 ~a~~~~~~iv~G 94 (272)
.|+++++.+.+=
T Consensus 154 ~a~~~Gv~l~lE 165 (287)
T 3kws_A 154 FAAQHGTSVIFE 165 (287)
T ss_dssp HHHHTTCCEEEC
T ss_pred HHHHcCCEEEEE
Confidence 888999876554
No 62
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=39.15 E-value=75 Score=24.10 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=41.8
Q ss_pred EEEEEeecc--------CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCC-cchhhhhhhhcCCChHHHHHHHHHH
Q psy17819 15 KIALVQMTV--------GKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYG-TKYFREYSEEIGSGITSKTLSNVAK 85 (272)
Q Consensus 15 ria~~Q~~~--------~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~-~~~~~~~~~~~~~~~~~~~l~~~a~ 85 (272)
++.+++..+ ..+.+...+.+.++++.+.+.++.+++.-=.-...+. ..........+ ..+-+.++++|+
T Consensus 80 d~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i--~~~n~~i~~~a~ 157 (209)
T 4hf7_A 80 ALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKI--QSLNARIEAYAK 157 (209)
T ss_dssp SEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHH--HHHHHHHHHHHH
T ss_pred CEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHH--HHHHHHHHHHHH
Confidence 566666532 1345667777888888888888988764211000000 00111111122 345677889999
Q ss_pred HcCcEEE
Q psy17819 86 EKEIFLV 92 (272)
Q Consensus 86 ~~~~~iv 92 (272)
++++.++
T Consensus 158 ~~~v~~i 164 (209)
T 4hf7_A 158 ANKIPFV 164 (209)
T ss_dssp HTTCCEE
T ss_pred hcCCeEe
Confidence 9887643
No 63
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=37.94 E-value=1.5e+02 Score=25.29 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=47.5
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccc-cCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGA-FNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~-~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++-|+.-.. .+..+ .+.+..-.-.++.+.+++|+.++.+..
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p-~~~~~~~~l~~a~~~Gi~VV~~Src~~ 295 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAP-QNKAFLQELQEASDRGIVVVNLTQCMS 295 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTSSSCSEEEEEEBTTTBCC-CCHHHHHHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecCCCCCCC-CcHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 4689999999999999999888788998776544 22211 112333334567889999999998864
No 64
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=36.86 E-value=82 Score=24.49 Aligned_cols=58 Identities=14% Similarity=0.041 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEE
Q psy17819 30 NLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLV 92 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv 92 (272)
..+.+.++++.+.+.++.+|+.-=.....+... .... .. ..+.+.++++|+++++.++
T Consensus 110 ~~~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~---~~~~-~~-~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 110 FPAYLENAAKLFTAKGAKVILSSQTPNNPWETG---TFVN-SP-TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCCCTTTTS---SCCC-CC-CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCccccCCC---cccc-ch-HHHHHHHHHHHHHhCCeEE
Confidence 344455666666667887765411111001000 0011 12 5778999999999988743
No 65
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=36.52 E-value=1.4e+02 Score=25.14 Aligned_cols=65 Identities=14% Similarity=0.004 Sum_probs=47.0
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-..-.-. -+. +..-.-.++.+.+++|+.++.+..
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p~-~~~~~l~~a~~~Gi~VV~~Sr~~~ 282 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGN-VSA-GFLKAMQEASQMGVVIVRSSRVGS 282 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTB-CCH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCH-HHHHHHHHHHHCCCEEEEECCCCC
Confidence 46899999999999999998888899987765442111 123 333333567889999999998864
No 66
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=35.85 E-value=1.4e+02 Score=25.07 Aligned_cols=65 Identities=15% Similarity=0.004 Sum_probs=46.8
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-..-.-. -+. +..-.-.++.+.+++|+.++.+..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p~-~~~~~l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGNGN-PFP-LTQNALEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBTTTB-CCH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCH-HHHHHHHHHHHCCCEEEEECCCCC
Confidence 36899999999999999998888899987765442111 123 333333567889999999998864
No 67
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=35.80 E-value=1.5e+02 Score=24.81 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=46.9
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-..-.-. -+..+. -.-.++.+.+++|+.++.+..
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p~~~~-~~l~~a~~~Gi~VV~~Sr~~~ 281 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGS-VSVRGI-AGMRKALEKGVVVMRSTRTGN 281 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTB-CCHHHH-HHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCHHHH-HHHHHHHHCCceEEEECCCCC
Confidence 46899999999999999998888899987765442111 123333 333567889999999998864
No 68
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=35.40 E-value=1.1e+02 Score=22.36 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=42.6
Q ss_pred cEEEEEeeccC-----CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcC
Q psy17819 14 FKIALVQMTVG-----KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKE 88 (272)
Q Consensus 14 iria~~Q~~~~-----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 88 (272)
..+.++++... .+.++..+.+.++++.+.+.++.+++.--.....+. . ... ....+.++++|++++
T Consensus 63 pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p~~~~-~------~~~--~~~n~~~~~~a~~~~ 133 (190)
T 1ivn_A 63 PRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYG-R------RYN--EAFSAIYPKLAKEFD 133 (190)
T ss_dssp CSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCGGGC-H------HHH--HHHHHHHHHHHHHTT
T ss_pred CCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCCcchh-H------HHH--HHHHHHHHHHHHHcC
Confidence 46677776432 356777777888888877778888876321111000 0 111 445678889999987
Q ss_pred cEEE
Q psy17819 89 IFLV 92 (272)
Q Consensus 89 ~~iv 92 (272)
+.++
T Consensus 134 v~~i 137 (190)
T 1ivn_A 134 VPLL 137 (190)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 7644
No 69
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=34.42 E-value=1.6e+02 Score=23.06 Aligned_cols=72 Identities=21% Similarity=0.166 Sum_probs=41.9
Q ss_pred cEEEEEeecc--CCCHHHHHHHHHHHHHHHHHCCCcEEEe-CCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcE
Q psy17819 14 FKIALVQMTV--GKDKNKNLENAVRFIRKAADNGASLIVL-PECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIF 90 (272)
Q Consensus 14 iria~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvf-PE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 90 (272)
++|..++... ....++..+.+++.++.|.+-|++.|++ |-.. ..+.+... . .+.++.+.+.|+++++.
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~----~~~~~~~~----~-~~~l~~l~~~a~~~gv~ 135 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLCPLND----GTIVPPEV----T-VEAIKRLSDLFARYDIQ 135 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCS----SBCCCHHH----H-HHHHHHHHHHHHTTTCE
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCC----chhHHHHH----H-HHHHHHHHHHHHHcCCE
Confidence 6776666432 1122456788889999999999998875 3321 01111111 0 12346666777888887
Q ss_pred EEEe
Q psy17819 91 LVGG 94 (272)
Q Consensus 91 iv~G 94 (272)
+.+=
T Consensus 136 l~~E 139 (272)
T 2q02_A 136 GLVE 139 (272)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5553
No 70
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=33.84 E-value=1.6e+02 Score=24.69 Aligned_cols=65 Identities=15% Similarity=0.025 Sum_probs=46.9
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-..-.-. -+. +..-.-.++.+.+++|+.++.+..
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn-~p~-~~~~~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGN-LYK-SVFDTLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTB-CCH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCH-HHHHHHHHHHHCCCEEEEECCCCC
Confidence 46899999999999999998888899977765542111 122 333333567889999999998864
No 71
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=33.61 E-value=93 Score=25.50 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCC-----CCCc--chhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNC-----PYGT--KYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~-----g~~~--~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|++.|+++=.... ++.. ....+...... .+.++.+.+.|+++++.+.+=
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~a~~~Gv~l~lE 179 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDF-ADRWNPILDVFDAEGVRFAHE 179 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHH-HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHH-HHHHHHHHHHHHHcCCEEEEE
Confidence 456788888999999999999887522211 0110 00011111111 345666777888888875543
No 72
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=33.27 E-value=1.1e+02 Score=26.31 Aligned_cols=56 Identities=20% Similarity=0.221 Sum_probs=39.8
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEe--ccccCCCCC--chhHHHHHHHHhhhCceEEEEE
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIY--PGAFNMTTG--PLHWELLVRSRANDNQVYVAAC 203 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~--p~~~~~~~~--~~~~~~~~~~ra~en~~~vv~~ 203 (272)
+|++|-|.. +++...+..+|||+|+. |..|..... .+.+ .....++++|++.+..+
T Consensus 42 ~Vl~alD~t-~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDCT-LEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSCC-HHHHHHHHHHTCCEEEESSCSSCSCCSCCCSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcccCCccccCcCCH-HHHHHHHHHCCCeEEEe
Confidence 688888864 67888888899999995 666543221 2344 55557788999888764
No 73
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=33.01 E-value=1.4e+02 Score=25.17 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=46.8
Q ss_pred CceEEEEeecCC-CChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDM-RFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~-~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|-. ..+++.+.+...|++=|+.-..-.-. -+. +..-.-.++.+.+++|+.++.+..
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G~Gn-~p~-~~~~~l~~a~~~Gi~VV~~Src~~ 285 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGS-IHK-NQKDVLKELLKKGLKVVVSSRVVA 285 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBTTTB-CCH-HHHHHHHHHHTTTCEEEEEESSSB
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CcH-HHHHHHHHHHHCCCEEEEeCCCCC
Confidence 457999999998 89999998888899987765542111 123 333333567789999999998864
No 74
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=31.43 E-value=1.1e+02 Score=24.03 Aligned_cols=58 Identities=12% Similarity=0.044 Sum_probs=40.1
Q ss_pred cEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 14 FKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 14 iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++..+...... ..+.+.+.++.|.+-|++.|+++- | .+..+.+.+.|+++++.+.+
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~----~---------------~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP----A---------------LSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC----C---------------GGGHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC----C---------------HHHHHHHHHHHHHhCCEEEE
Confidence 677766665322 345677888889999999988862 1 12346778889999987654
Q ss_pred e
Q psy17819 94 G 94 (272)
Q Consensus 94 G 94 (272)
=
T Consensus 134 E 134 (262)
T 3p6l_A 134 H 134 (262)
T ss_dssp E
T ss_pred E
Confidence 4
No 75
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=31.22 E-value=1e+02 Score=26.60 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=31.2
Q ss_pred cEEEEEee-cc-------CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCC
Q psy17819 14 FKIALVQM-TV-------GKDKNKNLENAVRFIRKAADNGASLIVLPEC 54 (272)
Q Consensus 14 iria~~Q~-~~-------~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 54 (272)
++|.+++. +. ..+.++.++.+.+.++.|.+.|+.+|+...+
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 67777642 11 2457889999999999999999999996433
No 76
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=30.49 E-value=85 Score=25.63 Aligned_cols=65 Identities=17% Similarity=-0.037 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCC-C-CCcchhhhhhhhcCCChHHHHHHHHHHHcCcE-EEE
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNC-P-YGTKYFREYSEEIGSGITSKTLSNVAKEKEIF-LVG 93 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~-g-~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~-iv~ 93 (272)
+..++.+++.++.|.+-|+..|+.|=.... + +......+...... .+.+..+.+.|+++++. +.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIA-RDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHH-HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHH-HHHHHHHHHHHHhcCCeEEEE
Confidence 456788899999999999999998754321 1 01110010011111 34566677778888887 543
No 77
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=30.46 E-value=1.3e+02 Score=23.98 Aligned_cols=65 Identities=11% Similarity=-0.029 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCC--CCc-chhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCP--YGT-KYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g--~~~-~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+++.++.|.+-|++.|+.+=....+ +.. ....+..... .+.++.+.+.|+++++.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERS--VESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHH--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHH--HHHHHHHHHHHHHcCCEEEEE
Confidence 4577888899999999999999742111100 110 0111111111 345677777888889875544
No 78
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=30.44 E-value=82 Score=22.14 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 31 LENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 31 ~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
.+...++++++.+.|+.-|+|-..+ ..+.+.+.|+++++.++ |
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~--------------------~~~e~~~~a~~~Girvv-~ 110 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGT--------------------ENEELEEILSENGIEPV-I 110 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTC--------------------CCHHHHHHHHHTTCEEE-E
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCC--------------------ChHHHHHHHHHcCCeEE-C
Confidence 4555667777777788876664322 12578899999999977 5
No 79
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=30.24 E-value=1.1e+02 Score=23.22 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=43.8
Q ss_pred ccEEEEEeeccC---------CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhh------------hhhhc
Q psy17819 13 SFKIALVQMTVG---------KDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFRE------------YSEEI 71 (272)
Q Consensus 13 ~iria~~Q~~~~---------~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~------------~~~~~ 71 (272)
...+.++++... .+.++..+.+.++++.+.+.++.+++.-= +......+.. ....+
T Consensus 72 ~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (240)
T 3mil_A 72 NIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIGP---GLVDREKWEKEKSEEIALGYFRTNENF 148 (240)
T ss_dssp CEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEECC---CCCCHHHHHHHCHHHHHTTCCCCHHHH
T ss_pred CCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEcC---CCCCchhhhhhccccccccccchHHHH
Confidence 356677776421 24566777778888888888998887541 1111111100 01111
Q ss_pred CCChHHHHHHHHHHHcCcEEE
Q psy17819 72 GSGITSKTLSNVAKEKEIFLV 92 (272)
Q Consensus 72 ~~~~~~~~l~~~a~~~~~~iv 92 (272)
..+.+.++++|+++++.++
T Consensus 149 --~~~n~~~~~~a~~~~v~~v 167 (240)
T 3mil_A 149 --AIYSDALAKLANEEKVPFV 167 (240)
T ss_dssp --HHHHHHHHHHHHHTTCCEE
T ss_pred --HHHHHHHHHHHHHhCCeEE
Confidence 3566788899998877643
No 80
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=29.99 E-value=1e+02 Score=25.36 Aligned_cols=45 Identities=20% Similarity=0.267 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 32 ENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 32 ~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+...+.+++|.+.|+. +|++++.+ . .+..+.+.+.|+++++.++.
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~G~----~-------------~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITEHI----P-------------VHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCC----C-------------HHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCC----C-------------HHHHHHHHHHHHHcCCEEEc
Confidence 4456678888888999 66666643 1 22357889999999997553
No 81
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=29.50 E-value=1.8e+02 Score=24.40 Aligned_cols=65 Identities=14% Similarity=0.119 Sum_probs=46.1
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhh-hCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRAN-DNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~-en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-..-.-. -+..+... -.++. +.+++|+.++.+..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p~~~~~~-l~~a~~~~gi~VV~~Sr~~~ 280 (331)
T 1agx_A 215 LPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGTGNGS-MANYLVPE-VRKLHDEQGLQIVRSSRVAQ 280 (331)
T ss_dssp CCCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEBTTTB-CCTTHHHH-HHHHHHTTCCEEEEEESSCS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCHHHHHH-HHHHHHcCCCEEEEECCCCC
Confidence 46899999999999999998888889977765431111 12333333 34566 88999999998864
No 82
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.35 E-value=84 Score=24.69 Aligned_cols=58 Identities=19% Similarity=-0.045 Sum_probs=40.1
Q ss_pred cEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 14 FKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 14 iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++..+..... ..++.+.+.++.|.+-|++.|+++- + .+.++.+.+.|+++++.+.+
T Consensus 75 l~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v~~~p----~---------------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 75 VTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLIVGVP----N---------------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp CEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEEEEEE----C---------------GGGHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEecccc----CCHHHHHHHHHHHHHhCCCEEEecC----C---------------HHHHHHHHHHHHHcCCEEEE
Confidence 56666655432 3467778888888888998888741 1 23457788889999987654
Q ss_pred e
Q psy17819 94 G 94 (272)
Q Consensus 94 G 94 (272)
=
T Consensus 132 E 132 (257)
T 3lmz_A 132 H 132 (257)
T ss_dssp E
T ss_pred e
Confidence 4
No 83
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=29.05 E-value=1.5e+02 Score=25.21 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=44.3
Q ss_pred cCCCHHHHHHHHHHHHHHHHHCCCc-----EEEeCCCC----CCC-C---Cc-chhhhhh-hhcCCChHHHHHHHHHHHc
Q psy17819 23 VGKDKNKNLENAVRFIRKAADNGAS-----LIVLPECF----NCP-Y---GT-KYFREYS-EEIGSGITSKTLSNVAKEK 87 (272)
Q Consensus 23 ~~~~~~~n~~~~~~~i~~A~~~~~d-----lvvfPE~~----~~g-~---~~-~~~~~~~-~~~~~~~~~~~l~~~a~~~ 87 (272)
+..|-...+++..++|+.|++.|+| -|=|.=+. .+. + .. ..+..+. ..++ .+.+..|.+.|++.
T Consensus 12 ig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~-~e~~~~L~~~~~~~ 90 (350)
T 3g8r_A 12 MANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQ-PEQMQKLVAEMKAN 90 (350)
T ss_dssp CTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCC-HHHHHHHHHHHHHT
T ss_pred ECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCC-HHHHHHHHHHHHHc
Confidence 3344455678888899988887776 77674221 111 0 00 1111111 1255 78999999999999
Q ss_pred CcEEEEe
Q psy17819 88 EIFLVGG 94 (272)
Q Consensus 88 ~~~iv~G 94 (272)
|+.++.-
T Consensus 91 Gi~~~st 97 (350)
T 3g8r_A 91 GFKAICT 97 (350)
T ss_dssp TCEEEEE
T ss_pred CCcEEec
Confidence 9997776
No 84
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=29.03 E-value=1.7e+02 Score=24.85 Aligned_cols=64 Identities=17% Similarity=0.039 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCc---chhhhhhhhcCCChHHHHHHHHHHHcC--cEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPYGT---KYFREYSEEIGSGITSKTLSNVAKEKE--IFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~---~~~~~~~~~~~~~~~~~~l~~~a~~~~--~~iv~G 94 (272)
+..++++++.++.|.+-|++.|++.=.. .|+.. ....+....+ .+.++.+.+.|++++ +.+.+=
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~--~e~L~~l~~~A~~~G~~v~l~lE 180 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRM--REGVDTAAGYIKDKGYNLRIALE 180 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHH--HHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHH--HHHHHHHHHHHHhcCCCeEEEEe
Confidence 5678889999999999999988763111 11110 0111111111 345566777777888 775553
No 85
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=28.76 E-value=63 Score=25.73 Aligned_cols=36 Identities=25% Similarity=0.276 Sum_probs=25.9
Q ss_pred HHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 37 FIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 37 ~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
..+.|.+.|+|+||.|-+. ..+.+.++++++.++.|
T Consensus 98 ~a~~Ai~AGA~fIvsP~~~----------------------~~vi~~~~~~gi~~ipG 133 (232)
T 4e38_A 98 QALAAKEAGATFVVSPGFN----------------------PNTVRACQEIGIDIVPG 133 (232)
T ss_dssp HHHHHHHHTCSEEECSSCC----------------------HHHHHHHHHHTCEEECE
T ss_pred HHHHHHHcCCCEEEeCCCC----------------------HHHHHHHHHcCCCEEcC
Confidence 3456777899999988631 23455677889999899
No 86
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=28.56 E-value=90 Score=23.24 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=37.3
Q ss_pred cEEEEEeecc---CCCHHHHHHHHHHHHHHHHHCCC--cEEEeCCCCCCCCC-cchhhhhhhhcCCChHHHHHHHHHHHc
Q psy17819 14 FKIALVQMTV---GKDKNKNLENAVRFIRKAADNGA--SLIVLPECFNCPYG-TKYFREYSEEIGSGITSKTLSNVAKEK 87 (272)
Q Consensus 14 iria~~Q~~~---~~~~~~n~~~~~~~i~~A~~~~~--dlvvfPE~~~~g~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~ 87 (272)
..+.++++.. ..+.++..+.+.++++++.+.++ .+++.--....... ..........+ ..+-+.++++|+++
T Consensus 75 pd~Vvi~~G~ND~~~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~~~~~~~~~~~~~~~~--~~~n~~~~~~a~~~ 152 (200)
T 4h08_A 75 FDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERL--NVRNQIALKHINRA 152 (200)
T ss_dssp CSEEEECCCSSCTTSCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCEESGGGCEECTHHHHH--HHHHHHHHHHHHHT
T ss_pred CCeEEEEeeeCCCCCCHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCcccccccccchhHHHH--HHHHHHHHHHhhhc
Confidence 4455666543 23556666666677776665554 44432111000000 00001111222 34567788899998
Q ss_pred CcEEE
Q psy17819 88 EIFLV 92 (272)
Q Consensus 88 ~~~iv 92 (272)
++.++
T Consensus 153 ~v~~i 157 (200)
T 4h08_A 153 SIEVN 157 (200)
T ss_dssp TCEEE
T ss_pred ceEEE
Confidence 87644
No 87
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=27.75 E-value=2.3e+02 Score=24.91 Aligned_cols=65 Identities=18% Similarity=0.052 Sum_probs=47.2
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++-|+.-..-.-. -+..+.. .-.++.+.+++|+.++.+..
T Consensus 304 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn-~p~~~~~-~l~~a~~~Gi~VV~~Sqc~~ 368 (438)
T 1zq1_A 304 EEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGTGLGH-TPNDIIP-SIERAVEEGVAVCMTSQCIY 368 (438)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTB-CCGGGHH-HHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEeeECCCC-CCHHHHH-HHHHHHHCCCEEEEeCCCCC
Confidence 46899999999999999998888899987765542111 1233333 33567889999999998764
No 88
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=26.64 E-value=1.3e+02 Score=24.52 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 32 ENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 32 ~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+...+.+++|.+.++. +|++.+.+ . .+..+.+.+.|+++++.++.+
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~G~----~-------------~~~~~~l~~~a~~~gi~vigP 121 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITEGI----P-------------TLDMVRAVEEIKALGSRLIGG 121 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCC----C-------------HHHHHHHHHHHHHHTCEEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCC----C-------------HHHHHHHHHHHHHcCCEEEeC
Confidence 3455677788888888 66666643 1 223577899999999976644
No 89
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=26.20 E-value=1.3e+02 Score=23.87 Aligned_cols=25 Identities=12% Similarity=0.133 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeC
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLP 52 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfP 52 (272)
+..++.+.+.++.|.+-|++.|++.
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4678888899999999999998874
No 90
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=25.99 E-value=1.2e+02 Score=23.87 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=21.0
Q ss_pred EEeecCCCChHHHHHHHHcCCcEEEecccc
Q psy17819 147 LGICYDMRFPELAQVYRKKGCDLLIYPGAF 176 (272)
Q Consensus 147 v~IC~D~~~pe~~~~~~~~ga~lil~p~~~ 176 (272)
+....=+..++-...+...||+.+++-++.
T Consensus 194 i~~~GGI~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 194 VAVGFGVSKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EEEEeecCCHHHHHHHHHcCCCEEEEcHHH
Confidence 333444667688877777899999887763
No 91
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=25.85 E-value=1.6e+02 Score=24.04 Aligned_cols=40 Identities=13% Similarity=0.074 Sum_probs=27.9
Q ss_pred HHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeee
Q psy17819 36 RFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSI 96 (272)
Q Consensus 36 ~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~ 96 (272)
..+++|.+.|+|.+|.-|.. .+..+..|+++++.+++..+
T Consensus 211 ~~i~~a~~~GvDt~ITGe~~---------------------~~~~~~~A~E~ginVI~AGH 250 (278)
T 3rxy_A 211 AVARAYFDHGVRTVLYIHIA---------------------PEEAERLRREGGGNLIVTGH 250 (278)
T ss_dssp HHHHHHHHTTCCEEEESCCC---------------------HHHHHHHHHHCSSEEEECCH
T ss_pred HHHHHHHHcCCCEEEEecCc---------------------hHHHHHHHHHcCCeEEEecc
Confidence 46777888999999999964 23334667777776666533
No 92
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.85 E-value=93 Score=25.37 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=25.2
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEeccccC
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIYPGAFN 177 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~ 177 (272)
=+++++-+..|+..+.....|||-+++-|+..
T Consensus 210 Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 210 PALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp CEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 34456668899999977778999999988743
No 93
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=25.68 E-value=1.3e+02 Score=24.69 Aligned_cols=31 Identities=16% Similarity=0.076 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEeCCC
Q psy17819 24 GKDKNKNLENAVRFIRKAADNGASLIVLPEC 54 (272)
Q Consensus 24 ~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 54 (272)
..+.+++++++.+.++.|.+.+.++.+.||.
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d 143 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPED 143 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 4578899999999999999999988877774
No 94
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=25.50 E-value=42 Score=28.40 Aligned_cols=66 Identities=20% Similarity=0.134 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHH-HC-CCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeec
Q psy17819 31 LENAVRFIRKAA-DN-GASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPEL 99 (272)
Q Consensus 31 ~~~~~~~i~~A~-~~-~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~ 99 (272)
+..++..+++.. +. ++++||.=-+-+.... .........+ .++.+.|+.+|+++++.|++-+...+
T Consensus 140 i~~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~-~~~~~r~~ei--~~isr~LK~lAkel~vpVi~lsQl~R 207 (338)
T 4a1f_A 140 IEQIRLQLRKLKSQHKELGIAFIDYLQLMSGS-KATKERHEQI--AEISRELKTLARELEIPIIALVQLNR 207 (338)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEECCCTH-HHHHHCCCCH--HHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEechHHhcCC-CCCCChHHHH--HHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 444444444443 34 6888887555443111 0001111223 57889999999999999998866544
No 95
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=25.49 E-value=2.9e+02 Score=23.05 Aligned_cols=39 Identities=13% Similarity=0.308 Sum_probs=29.4
Q ss_pred cEEEEEeec-c-------CCCHHHHHHHHHHHHHHHHHCCCcEEEeC
Q psy17819 14 FKIALVQMT-V-------GKDKNKNLENAVRFIRKAADNGASLIVLP 52 (272)
Q Consensus 14 iria~~Q~~-~-------~~~~~~n~~~~~~~i~~A~~~~~dlvvfP 52 (272)
+++.+++.. . ....+..++.+.+.++.|.+.|+.+|+++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~n 115 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCYS 115 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 667665532 1 23467788999999999999999999983
No 96
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=25.43 E-value=1.1e+02 Score=25.19 Aligned_cols=57 Identities=19% Similarity=0.183 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHCCCcE-EEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeec
Q psy17819 30 NLENAVRFIRKAADNGASL-IVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPEL 99 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~dl-vvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~ 99 (272)
+++...++.+.|.+.|+|- +|.|=+... +.+ ....+.++.+|...++.|++=.+|-+
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~~------------~~~-~~l~~~f~~ia~a~~lPiilYn~P~~ 153 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYSK------------PSQ-EGLLAHFGAIAAATEVPICLYDIPGR 153 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSC------------CCH-HHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCC------------CCH-HHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 4666677888888889985 344433321 011 45678888888887777665434443
No 97
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=25.23 E-value=57 Score=26.09 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCC---Ccc-hhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLPECFNCPY---GTK-YFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~---~~~-~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+..++.+.+.++.|.+-|++.|+.|=....|. ... ...+..... .+.++.+.+.|+++++.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA--IESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH--HHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH--HHHHHHHHHHHHHcCCEEEEE
Confidence 45678889999999999999988542110121 000 000000111 234566677888888875554
No 98
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=25.07 E-value=1e+02 Score=24.87 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=14.5
Q ss_pred HHHHHHHHHCCCcEEEeCCCC
Q psy17819 35 VRFIRKAADNGASLIVLPECF 55 (272)
Q Consensus 35 ~~~i~~A~~~~~dlvvfPE~~ 55 (272)
..+++.-.+.++|||+|.|..
T Consensus 33 ~~i~~~i~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 33 PVIAQMVQYHDFDIFGTQECF 53 (298)
T ss_dssp HHHHHHHHHTTCSEEEEESBC
T ss_pred HHHHHHHHHcCCCEEEEeCCC
Confidence 334444445699999999974
No 99
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=25.05 E-value=1.6e+02 Score=25.36 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHCCCcEEEeCCCCC--CCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 30 NLENAVRFIRKAADNGASLIVLPECFN--CPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~dlvvfPE~~~--~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
..+...++++.+++.|+|+|.|--+-. +.+.. ..++ .+.+..|.+.+++.|+.++.-
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f-------~gl~-~egl~~L~~~~~~~Gl~~~te 212 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDF-------QGLG-LEGLKILKRVSDEYGLGVISE 212 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSC-------CCCT-HHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhh-------cCCC-HHHHHHHHHHHHHcCCEEEEe
Confidence 577788888888899999998865431 11111 1123 467889999999999997776
No 100
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=24.35 E-value=2.4e+02 Score=23.74 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=46.0
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccc-cCCCCCchhHHHHHHHHhhhCceEEEEEcCC-cC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGA-FNMTTGPLHWELLVRSRANDNQVYVAACSPA-QD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~-~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~-g~ 208 (272)
..++.++-+|=...+++.+.+...|++=|+.-.. .+.. +..+. -.-.++.+.+++|+.++.+ ..
T Consensus 221 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~--p~~~~-~~l~~a~~~Gi~VV~~Sr~~~~ 286 (337)
T 4pga_A 221 LPQVDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSV--SSRVV-PALQQLRKNGTQIIRSSHVNQG 286 (337)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBC--CTTTH-HHHHHHHHTTCEEEEEESCCSB
T ss_pred CCCEEEEEECCCCCHHHHHHHHhcCCCEEEEEEeCCCCC--CHHHH-HHHHHHHHCCCEEEEeccCCCC
Confidence 4579999999999999999888899997765443 2221 22333 2335677899999999988 53
No 101
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=24.31 E-value=1.2e+02 Score=24.73 Aligned_cols=51 Identities=16% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
++++..++.+.|.+.|+| ++|.|=+... .......+.++.+|...++.|++
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~-------------~s~~~l~~~f~~ia~a~~lPiil 131 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYNK-------------PTQEGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSC-------------CCHHHHHHHHHHHHHHCSSCEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCC-------------CCHHHHHHHHHHHHHhCCCCEEE
No 102
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=24.13 E-value=2.3e+02 Score=24.84 Aligned_cols=65 Identities=18% Similarity=0.066 Sum_probs=47.1
Q ss_pred CceEEEEeecCCCChHHHHHHHHcCCcEEEeccccCCCCCchhHHHHHHHHhhhCceEEEEEcCCcC
Q psy17819 142 ICNIGLGICYDMRFPELAQVYRKKGCDLLIYPGAFNMTTGPLHWELLVRSRANDNQVYVAACSPAQD 208 (272)
Q Consensus 142 ~~~igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~~~~~~~~~~~~~~~ra~en~~~vv~~n~~g~ 208 (272)
..++.++-+|=...+++.+.+...|++-|+.-..-.-. -+..+. -.-.++.+.+++|+.++.+..
T Consensus 301 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn-~p~~~~-~~l~~a~~~Gi~VV~~Sqc~~ 365 (435)
T 2d6f_A 301 EERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLGH-CPDTLI-PVIGEAHDMGVPVAMTSQCLN 365 (435)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHTTCSEEEEEEBTTTB-CCGGGH-HHHHHHHHTTCCEEEEETTCB
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEecCCCCC-cCHHHH-HHHHHHHhCCCEEEEeCCCCC
Confidence 46899999999999999998888899987765542111 123333 333567889999999998764
No 103
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=23.71 E-value=2.1e+02 Score=21.20 Aligned_cols=73 Identities=7% Similarity=0.142 Sum_probs=43.1
Q ss_pred cEEEEEeecc-------CCCHHHHHHHHHHHHHHHHHCC---------CcEEEeCCCCCCCCCc---chhh----hhhhh
Q psy17819 14 FKIALVQMTV-------GKDKNKNLENAVRFIRKAADNG---------ASLIVLPECFNCPYGT---KYFR----EYSEE 70 (272)
Q Consensus 14 iria~~Q~~~-------~~~~~~n~~~~~~~i~~A~~~~---------~dlvvfPE~~~~g~~~---~~~~----~~~~~ 70 (272)
..+.++++.. ..+.++..+.+.++++++.+.+ +.+++. ..+.... ..+. .....
T Consensus 84 ~d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~---~~p~~~~~~~~~~~~~~~~~~~~ 160 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVV---SPPPLAPMPHPWFQLIFEGGEQK 160 (216)
T ss_dssp CSEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEE---ECCCCCCCCSHHHHHHTTTHHHH
T ss_pred CCEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEE---eCCCcCcccCCcchhhhccHHHH
Confidence 4677777642 1356677778888888887777 777766 1111111 0110 01112
Q ss_pred cCCChHHHHHHHHHHHcCcEE
Q psy17819 71 IGSGITSKTLSNVAKEKEIFL 91 (272)
Q Consensus 71 ~~~~~~~~~l~~~a~~~~~~i 91 (272)
+ ..+.+.++++|+++++.+
T Consensus 161 ~--~~~n~~~~~~a~~~~v~~ 179 (216)
T 2q0q_A 161 T--TELARVYSALASFMKVPF 179 (216)
T ss_dssp H--TTHHHHHHHHHHHHTCCE
T ss_pred H--HHHHHHHHHHHHHcCCcE
Confidence 2 467788899999988654
No 104
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=23.70 E-value=1e+02 Score=22.80 Aligned_cols=81 Identities=16% Similarity=0.180 Sum_probs=42.5
Q ss_pred ccEEEEEeeccCCCH-------------------HHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCC
Q psy17819 13 SFKIALVQMTVGKDK-------------------NKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGS 73 (272)
Q Consensus 13 ~iria~~Q~~~~~~~-------------------~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~ 73 (272)
..||++++.+..... +.-.+.+.+.+++-.+.|+++|+ -+..+..+.-..+.+.....-.
T Consensus 21 nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl-~~k~I~d~a~~~l~k~gI~~v~ 99 (159)
T 1ass_A 21 NAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL-CQKGIDDVAQHYLAKEGIYAVR 99 (159)
T ss_dssp EEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEE-ESSCBCHHHHHHHHHTTCEEEC
T ss_pred CccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEE-ECCccCHHHHHHHHHCCCEEEc
Confidence 378999998743211 11122345566666788999764 4444332221222221111111
Q ss_pred ChHHHHHHHHHHHcCcEEEEe
Q psy17819 74 GITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 74 ~~~~~~l~~~a~~~~~~iv~G 94 (272)
.--...++++|+..|..++.-
T Consensus 100 ~v~~~dleria~atGa~iv~~ 120 (159)
T 1ass_A 100 RVKKSDMEKLAKATGAKIVTD 120 (159)
T ss_dssp SCCHHHHHHHHHHHTCCCBSS
T ss_pred cCCHHHHHHHHHHhCCeeeCc
Confidence 344677788888877775544
No 105
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=23.62 E-value=98 Score=25.26 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhh-hcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSE-EIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| ++|.|=+ |.. +.+ ....+.++.+|...++.|++
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~~P~------------y~~~~s~-~~l~~~f~~va~a~~lPiil 127 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASLPPY------------YFPRLSE-RQIAKYFRDLCSAVSIPVFL 127 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSC------------SSTTCCH-HHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCc------------CCCCCCH-HHHHHHHHHHHHhcCCCEEE
No 106
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=23.46 E-value=1.1e+02 Score=25.13 Aligned_cols=51 Identities=12% Similarity=0.234 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| ++|.|=+... .......+.++.+|...++.|++
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~-------------~s~~~l~~~f~~va~a~~lPiil 143 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNK-------------PSQEGMYQHFKAIAESTPLPVML 143 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSC-------------CCHHHHHHHHHHHHHTCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCC-------------CCHHHHHHHHHHHHHhcCCCEEE
No 107
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=23.30 E-value=1e+02 Score=26.04 Aligned_cols=40 Identities=5% Similarity=0.218 Sum_probs=24.9
Q ss_pred ccEEEEEeec-cC-CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCC
Q psy17819 13 SFKIALVQMT-VG-KDKNKNLENAVRFIRKAADNGASLIVLPECF 55 (272)
Q Consensus 13 ~iria~~Q~~-~~-~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 55 (272)
.|||.....+ .. .+.....+.+.++|++ .+||||+|.|..
T Consensus 119 ~lkVlSWNI~Gl~~~~~~~R~~~I~~~I~~---~~PDIV~LQEv~ 160 (362)
T 4gew_A 119 EVSVMSWNIDGLDGRSLLTRMKAVAHIVKN---VNPDILFLQEVV 160 (362)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHHH---HCCSEEEEEEEC
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHHH---cCCCEEEEEcCC
Confidence 3666666654 22 3445555555555544 589999999963
No 108
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=23.17 E-value=84 Score=24.36 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=22.2
Q ss_pred cEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCC
Q psy17819 14 FKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFN 56 (272)
Q Consensus 14 iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~ 56 (272)
|||.....+- .....+++.+.++ +.++|+|++.|...
T Consensus 2 lrv~t~Nv~g---~~~~~~~i~~~i~---~~~~Dii~lQE~~~ 38 (257)
T 2voa_A 2 LKIATFNVNS---IRSRLHIVIPWLK---ENKPDILCMQETKV 38 (257)
T ss_dssp EEEEEEECSC---GGGTHHHHHHHHH---HHCCSEEEEECCCC
T ss_pred eEEEEEecCC---hHHHHHHHHHHHh---hcCCCEEEEEEeec
Confidence 5666655541 1122344444444 45899999999864
No 109
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=23.11 E-value=88 Score=25.66 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHCCCcE--EEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeee
Q psy17819 30 NLENAVRFIRKAADNGASL--IVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPE 98 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~dl--vvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~ 98 (272)
+++...++.+.|.+.|+|- ++-|-+.-. .+ ....+.++.+|...++.|++=.+|.
T Consensus 82 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~-------------~~-~~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADAIMLITPYYNKT-------------NQ-RGLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSCC-------------CH-HHHHHHHHHHHHHHCSCEEEEECHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCCCCCC-------------CH-HHHHHHHHHHHHhCCCCEEEEeccc
Confidence 4566667778888888884 444544321 11 4566777888877777666543443
No 110
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=22.86 E-value=1e+02 Score=23.21 Aligned_cols=50 Identities=12% Similarity=0.034 Sum_probs=28.2
Q ss_pred CCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeee
Q psy17819 45 GASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSI 96 (272)
Q Consensus 45 ~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~ 96 (272)
++++||+=|....-............+ ....+.|+++++++++.+++-+.
T Consensus 105 ~~~lliiD~~~~~l~~~~~~~~~~~~~--~~~~~~L~~l~~~~~~~vi~~~h 154 (220)
T 2cvh_A 105 NFALVVVDSITAHYRAEENRSGLIAEL--SRQLQVLLWIARKHNIPVIVINQ 154 (220)
T ss_dssp TEEEEEEECCCCCTTGGGGSSTTHHHH--HHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEcCcHHHhhhcCchHHHHHHH--HHHHHHHHHHHHHcCCEEEEEee
Confidence 699999988764311100000000111 34566789999988877666534
No 111
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=22.75 E-value=2.4e+02 Score=23.79 Aligned_cols=74 Identities=14% Similarity=0.250 Sum_probs=44.2
Q ss_pred EEEEEeecc---C----CCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCC-CCcchhhhhhhhcCCChHHHHHHHHHHH
Q psy17819 15 KIALVQMTV---G----KDKNKNLENAVRFIRKAADNGASLIVLPECFNCP-YGTKYFREYSEEIGSGITSKTLSNVAKE 86 (272)
Q Consensus 15 ria~~Q~~~---~----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g-~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 86 (272)
.+.++++.. . .+.++..+.+.++++++.+.++.+|+.-=..... +... . ...... ..+.+.++++|++
T Consensus 232 d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vilvtP~~~~~~~~~~--~-~~~~~~-~~~~~~i~~lA~~ 307 (375)
T 2o14_A 232 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILSTPQGRATDFTSE--G-IHSSVN-RWYRASILALAEE 307 (375)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEECCCCCTTCBCTT--S-CBCCTT-STTHHHHHHHHHH
T ss_pred CEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCcccccCcc--c-chhHHH-HHHHHHHHHHHHH
Confidence 677888742 1 2567777888888888887888887763110000 1000 0 001122 5677888999999
Q ss_pred cCcEEE
Q psy17819 87 KEIFLV 92 (272)
Q Consensus 87 ~~~~iv 92 (272)
+++.++
T Consensus 308 ~~v~~i 313 (375)
T 2o14_A 308 EKTYLI 313 (375)
T ss_dssp TTCEEE
T ss_pred cCCeEE
Confidence 887643
No 112
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=22.62 E-value=3.1e+02 Score=23.23 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEee
Q psy17819 27 KNKNLENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGS 95 (272)
Q Consensus 27 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs 95 (272)
.+++++...+.+++.++.|.+.||=+= ..|. +.-...++++|++.++.||+++
T Consensus 78 ~~~~~~~~~~~l~~~k~~Gg~tIVd~T--~~g~--------------GRd~~~l~~is~~tGv~IV~~T 130 (360)
T 3tn4_A 78 EDESLRVAVEAAEKMKRHGIQTVVDPT--PNDC--------------GRNPAFLRRVAEETGLNIICAT 130 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECC--CTTT--------------TCCHHHHHHHHHHHCCEEEEEE
T ss_pred hhhHHHHHHHHHHHHHhcCCCeEEECC--CCCc--------------CcCHHHHHHHHHHcCCCEEEeC
Confidence 456677777777788888999888432 2221 3335778999999999999995
No 113
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.55 E-value=1.1e+02 Score=24.92 Aligned_cols=31 Identities=19% Similarity=0.108 Sum_probs=24.5
Q ss_pred EEEeecCCCChHHHHHHHHcCCcEEEecccc
Q psy17819 146 GLGICYDMRFPELAQVYRKKGCDLLIYPGAF 176 (272)
Q Consensus 146 gv~IC~D~~~pe~~~~~~~~ga~lil~p~~~ 176 (272)
=+++++-+..|+..+.....|||.+++-|+.
T Consensus 208 pv~vGfGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 208 PPLLGFGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp CEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CEEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 3445666889999997777899999988774
No 114
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=22.50 E-value=1.2e+02 Score=23.08 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHH--HCCCcEEEeCCCCCCCCCc-----chhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeecc
Q psy17819 31 LENAVRFIRKAA--DNGASLIVLPECFNCPYGT-----KYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPELD 100 (272)
Q Consensus 31 ~~~~~~~i~~A~--~~~~dlvvfPE~~~~g~~~-----~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~~ 100 (272)
++++.+++.++. ..++++|++=|.... +.+ ....+..... ....+.+.++++++++.|++=++...+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~llilDe~~~~-l~~~~~~~~~~~~r~~~~--~~~~~~l~~~~~~~g~tvi~vtH~~~~ 182 (231)
T 4a74_A 109 VQQAEDKIKELLNTDRPVKLLIVDSLTSH-FRSEYIGRGALAERQQKL--AKHLADLHRLANLYDIAVFVTNQVQAN 182 (231)
T ss_dssp HHHHHHHHHHHTTSSSCEEEEEEETSSHH-HHHHSCSTTHHHHHHHHH--HHHHHHHHHHHHHHTCEEEEEEECC--
T ss_pred HHHHHHHHHHhcccCCceeEEEECChHHH-hccccCCCcchhHHHHHH--HHHHHHHHHHHHHCCCeEEEEeecccC
Confidence 344444444433 468999999886521 000 0000000001 256788888999888888887564443
No 115
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=22.27 E-value=95 Score=24.05 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=21.3
Q ss_pred EEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEeCCCCC
Q psy17819 16 IALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVLPECFN 56 (272)
Q Consensus 16 ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~~ 56 (272)
+-++|+|+..... ..+++.+ ...+.++|+|++.|.-.
T Consensus 20 lri~s~Nv~~~~~-~~~~l~~---~i~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 20 YRVLQANLQRKKL-ATAELAI---EAATRKAAIALIQEPYV 56 (245)
T ss_dssp EEEEEEECTTCHH-HHHHHHH---HHHHHTCSEEEEESCCC
T ss_pred eeeeeeeccccHH-HHHHHHH---HHhhcCCCEEEEEcccc
Confidence 3455555543322 2333333 34456899999999864
No 116
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=22.21 E-value=94 Score=27.19 Aligned_cols=66 Identities=17% Similarity=0.141 Sum_probs=38.2
Q ss_pred HHHHHHHHHHH-HCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeec
Q psy17819 32 ENAVRFIRKAA-DNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPEL 99 (272)
Q Consensus 32 ~~~~~~i~~A~-~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~ 99 (272)
..+...+++.+ +.++++||+=+.................+ ....+.|+.+|+++++.|++=+...+
T Consensus 299 ~~i~~~~~~l~~~~~~~livID~l~~~~~~~~~~~~~~~~i--~~i~~~Lk~lAke~~i~vi~~sql~r 365 (454)
T 2r6a_A 299 SDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEV--SEISRSLKALARELEVPVIALSQLSR 365 (454)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEECGGGSCCSCC----CHHHH--HHHHHHHHHHHHHHTCCEEEEECCCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEccHHHhccCCCCCCCHHHHH--HHHHHHHHHHHHHhCCeEEEEecCCc
Confidence 33344444333 46899999988775421110000011122 56788899999999988887755433
No 117
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.11 E-value=94 Score=24.46 Aligned_cols=35 Identities=34% Similarity=0.482 Sum_probs=26.0
Q ss_pred HHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCc------EEEEe
Q psy17819 38 IRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEI------FLVGG 94 (272)
Q Consensus 38 i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~------~iv~G 94 (272)
.++|.+.|++++|-|-+. ..+.+.|+++++ .++.|
T Consensus 78 a~~ai~AGA~fivsP~~~----------------------~evi~~~~~~~v~~~~~~~~~PG 118 (217)
T 3lab_A 78 FQKAIDAGAQFIVSPGLT----------------------PELIEKAKQVKLDGQWQGVFLPG 118 (217)
T ss_dssp HHHHHHHTCSEEEESSCC----------------------HHHHHHHHHHHHHCSCCCEEEEE
T ss_pred HHHHHHcCCCEEEeCCCc----------------------HHHHHHHHHcCCCccCCCeEeCC
Confidence 456777899999988642 335567888888 88999
No 118
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=21.83 E-value=1.1e+02 Score=24.90 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| +++.|=+... .......+.++.+|...++.|++
T Consensus 80 ~t~~ai~la~~a~~~Gadavlv~~P~y~~-------------~s~~~l~~~f~~ia~a~~lPiil 131 (289)
T 2yxg_A 80 CTEEAIELSVFAEDVGADAVLSITPYYNK-------------PTQEGLRKHFGKVAESINLPIVL 131 (289)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSC-------------CCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCC-------------CCHHHHHHHHHHHHHhcCCCEEE
No 119
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=21.78 E-value=1.4e+02 Score=24.75 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| +++.|=+... .......+.++.+|...++.|++
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~~-------------~s~~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPY-------------ITDAGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSC-------------CCHHHHHHHHHHHHHHSSSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCC-------------CCHHHHHHHHHHHHHhCCCCEEE
No 120
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=21.62 E-value=1.8e+02 Score=24.66 Aligned_cols=61 Identities=11% Similarity=0.099 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEe----CCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeec
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVL----PECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPEL 99 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvf----PE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~ 99 (272)
.+..+...++++.+++.++|++-| |..+..+|.. .. .+.++.+++.+++.|+.++.- ....
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~g---------lg-~egl~~l~~~~~e~Gl~~~te-~~d~ 180 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQG---------LG-EKGLEYLREAADKYGMYVVTE-ALGE 180 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCC---------CT-HHHHHHHHHHHHHHTCEEEEE-CSSG
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcC---------CC-HHHHHHHHHHHHHcCCcEEEE-eCCH
Confidence 345778888999999999999876 4443322211 12 467889999999999997776 4343
No 121
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=21.48 E-value=1.4e+02 Score=23.63 Aligned_cols=39 Identities=13% Similarity=0.252 Sum_probs=22.9
Q ss_pred ccEEEEEeeccCCCHHHHHHH-HHHHHHHHHHCCCcEEEeCCCCCC
Q psy17819 13 SFKIALVQMTVGKDKNKNLEN-AVRFIRKAADNGASLIVLPECFNC 57 (272)
Q Consensus 13 ~iria~~Q~~~~~~~~~n~~~-~~~~i~~A~~~~~dlvvfPE~~~~ 57 (272)
.+||...... + .....++ +.+++ .+.++|||++.|....
T Consensus 28 ~l~v~t~Ni~--~-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 28 TLKIASWNVD--G-LRAWIKKKGLDWV---KEEAPDILCLQETKCS 67 (285)
T ss_dssp CEEEEEEECS--S-HHHHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred ceEEEEEecc--c-ChhhhhhhHHHHH---HhcCCCEEEEEEeecc
Confidence 4666665554 2 2222222 34444 3458999999998754
No 122
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.39 E-value=1.4e+02 Score=24.60 Aligned_cols=44 Identities=23% Similarity=0.296 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 33 NAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 33 ~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
...+.+++|.+.|+. +|++.+.+ . .+..+.+.+.|+++++.++.
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~G~----~-------------~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITEGI----P-------------VHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCC----C-------------HHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC----C-------------HHHHHHHHHHHHHcCCEEEc
Confidence 334567777778888 56555543 1 22357788999999997553
No 123
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.32 E-value=1.5e+02 Score=24.32 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHCCCcEE--EeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeeec
Q psy17819 30 NLENAVRFIRKAADNGASLI--VLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPEL 99 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~dlv--vfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~~ 99 (272)
+++...++.+.|.+.|+|-+ +-|=+.-. .+ ....+.++.+|...++.|++=.+|.+
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~-------------~~-~~l~~~f~~va~a~~lPiilYn~P~~ 144 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSVVPYYNKP-------------SQ-EGIYQHFKTIAEATSIPMIIYNVPGR 144 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCC-------------CH-HHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCC-------------CH-HHHHHHHHHHHHhCCCCEEEEECCch
Confidence 46666778888888898863 33433311 11 45677888888887777665434433
No 124
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.29 E-value=68 Score=24.12 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=20.8
Q ss_pred cccccccEEEEEeeccCCCHHHHHHHHHHHHHHHHHCCCcEEEe
Q psy17819 8 MSTAKSFKIALVQMTVGKDKNKNLENAVRFIRKAADNGASLIVL 51 (272)
Q Consensus 8 ~~m~~~iria~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvf 51 (272)
|+|+..|||.++--....+ .|.+++.+.+.+..+.+.++-++
T Consensus 1 m~m~~~Mkilii~gS~r~~--g~t~~la~~i~~~l~~g~~v~~~ 42 (193)
T 1rtt_A 1 MSLSDDIKVLGISGSLRSG--SYNSAALQEAIGLVPPGMSIELA 42 (193)
T ss_dssp ------CEEEEEESCCSTT--CHHHHHHHHHHTTCCTTCEEEEC
T ss_pred CCCCCCceEEEEECCCCCC--ChHHHHHHHHHHhccCCCeEEEE
Confidence 5676678988877653322 46666666555443355666554
No 125
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=21.23 E-value=1.5e+02 Score=26.37 Aligned_cols=46 Identities=20% Similarity=0.307 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 32 ENAVRFIRKAADNGASLIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 32 ~~~~~~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+...+.+++|.+.|+.+||+.|.+- ....+.+.+.|+++++.++..
T Consensus 47 ~~v~~~v~e~~~~Gv~~viis~Gf~-----------------~~~~~~l~~~A~~~g~rliGP 92 (480)
T 3dmy_A 47 EYAAELANQALDRNLNVMMFSDNVT-----------------LEDEIQLKTRAREKGLLVMGP 92 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCC-----------------HHHHHHHHHHHHHTTCCEECS
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCC-----------------HHHHHHHHHHHHHcCCEEEec
Confidence 4556788888889999888876541 234577899999999876544
No 126
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=21.17 E-value=2.7e+02 Score=21.09 Aligned_cols=74 Identities=8% Similarity=0.043 Sum_probs=43.6
Q ss_pred cEEEEEeeccC-------CCHHHHHHHHHHHHHHHHHC-------CCcEEEeCCCCCCCCCcc---hhh-h-hhhhcCCC
Q psy17819 14 FKIALVQMTVG-------KDKNKNLENAVRFIRKAADN-------GASLIVLPECFNCPYGTK---YFR-E-YSEEIGSG 74 (272)
Q Consensus 14 iria~~Q~~~~-------~~~~~n~~~~~~~i~~A~~~-------~~dlvvfPE~~~~g~~~~---~~~-~-~~~~~~~~ 74 (272)
..+.++++.+. .+.++..+.+.++++++.+. ++.+++.- .+..... .+. . ....+ .
T Consensus 102 ~d~VvI~~GtND~~~~~~~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~---p~~~~~~~~~~~~~~~~~~~~--~ 176 (232)
T 3dci_A 102 LDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVA---PPPCVAGPGGEPAGGRDIEQS--M 176 (232)
T ss_dssp CSEEEEECCTTTTSGGGTSSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEE---CCCCCCCTTSSCGGGCCHHHH--T
T ss_pred CCEEEEEeccCCCccccCCCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEe---CCCcCcccCcccccccHHHHH--H
Confidence 46777777432 15677777788888887763 67877652 1111100 010 0 01122 5
Q ss_pred hHHHHHHHHHHHcCcEEE
Q psy17819 75 ITSKTLSNVAKEKEIFLV 92 (272)
Q Consensus 75 ~~~~~l~~~a~~~~~~iv 92 (272)
.+.+.++++|+++++.++
T Consensus 177 ~~~~~~~~~a~~~~v~~i 194 (232)
T 3dci_A 177 RLAPLYRKLAAELGHHFF 194 (232)
T ss_dssp THHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHhCCeEE
Confidence 677899999999988743
No 127
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=21.03 E-value=1.1e+02 Score=25.07 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhh-hcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSE-EIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| +++.|=+ |.. +.+ ....+.++.+|...++.|++
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~------------y~~~~s~-~~l~~~f~~va~a~~lPiil 128 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSHSPY------------YFPRLPE-KFLAKYYEEIARISSHSLYI 128 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEECCCC------------SSCSCCH-HHHHHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCc------------CCCCCCH-HHHHHHHHHHHHhcCCCEEE
No 128
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=21.02 E-value=1.2e+02 Score=24.52 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=24.6
Q ss_pred EEEEeecCCCChHHHHHHHHcCCcEEEeccccC
Q psy17819 145 IGLGICYDMRFPELAQVYRKKGCDLLIYPGAFN 177 (272)
Q Consensus 145 igv~IC~D~~~pe~~~~~~~~ga~lil~p~~~~ 177 (272)
+=+++++-+..|+..+.+. ++||-+++-|++.
T Consensus 200 ~Pv~vGfGIst~e~a~~~~-~~ADGVIVGSAiV 231 (252)
T 3tha_A 200 LPIFVGFGIQNNQDVKRMR-KVADGVIVGTSIV 231 (252)
T ss_dssp SCEEEESSCCSHHHHHHHT-TTSSEEEECHHHH
T ss_pred CcEEEEcCcCCHHHHHHHH-hcCCEEEECHHHH
Confidence 3455677788999998876 4799999988743
No 129
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=20.89 E-value=1.7e+02 Score=24.00 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=27.9
Q ss_pred HHHHHCCCcEEEeCCCCC-CCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 39 RKAADNGASLIVLPECFN-CPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 39 ~~A~~~~~dlvvfPE~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
+++.+.+..+++++.-.. +|.. .+ .+.++.+.++|+++++.+++-
T Consensus 144 ~~~l~~~~~~v~i~~p~nptG~~----------~~-~~~l~~l~~~~~~~~~~li~D 189 (377)
T 3fdb_A 144 EKGFQAGARSILLCNPYNPLGMV----------FA-PEWLNELCDLAHRYDARVLVD 189 (377)
T ss_dssp HHHHHTTCCEEEEESSBTTTTBC----------CC-HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhccCCCEEEEeCCCCCCCCC----------CC-HHHHHHHHHHHHHcCCEEEEE
Confidence 333444567777665432 2211 12 345788889999999998877
No 130
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=20.84 E-value=97 Score=26.99 Aligned_cols=54 Identities=22% Similarity=0.127 Sum_probs=33.6
Q ss_pred HCCCcEEEeCCCCCCCCC--cchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeee
Q psy17819 43 DNGASLIVLPECFNCPYG--TKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPE 98 (272)
Q Consensus 43 ~~~~dlvvfPE~~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~ 98 (272)
+.++++||.=.+.+.... ..........+ ....+.|+.+|+++++.|++-+...
T Consensus 308 ~~~~~lIvID~l~~~~~~~~~~~~~~r~~~i--~~i~~~Lk~lAke~~v~vi~lsql~ 363 (444)
T 2q6t_A 308 QNQVGLIIIDYLQLMSGPGSGKSGENRQQEI--AAISRGLKALARELGIPIIALSQLS 363 (444)
T ss_dssp HSCCCEEEEECGGGCBCC-------CHHHHH--HHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HcCCCEEEEcChhhcCCCcCCCCCCCHHHHH--HHHHHHHHHHHHHhCCeEEEEecCC
Confidence 468999998777654211 00001111223 5678899999999999888875533
No 131
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=20.82 E-value=3e+02 Score=22.10 Aligned_cols=61 Identities=15% Similarity=0.160 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCCCC--CCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEeeeee
Q psy17819 29 KNLENAVRFIRKAADNGASLIVLPECFN--CPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGGSIPE 98 (272)
Q Consensus 29 ~n~~~~~~~i~~A~~~~~dlvvfPE~~~--~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~Gs~~~ 98 (272)
+..+...++++++++.|+|+|-|--+-. +.|.... .. .+.++.+++.+++.++.++.- ...
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g-------~~-~egl~~l~~~~~~~Gl~~~te-~~d 96 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQG-------YG-EKALRWMREAADEYGLVTVTE-VMD 96 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCC-------CT-HHHHHHHHHHHHHHTCEEEEE-CCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccC-------cc-HHHHHHHHHHHHHcCCcEEEe-eCC
Confidence 3477788888888889999987743311 1111111 11 567889999999999997776 434
No 132
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=20.81 E-value=1.6e+02 Score=24.37 Aligned_cols=33 Identities=12% Similarity=0.342 Sum_probs=21.0
Q ss_pred HHHHHHHCCCcEEEeCCCCCCCCCcchhhhhhh
Q psy17819 37 FIRKAADNGASLIVLPECFNCPYGTKYFREYSE 69 (272)
Q Consensus 37 ~i~~A~~~~~dlvvfPE~~~~g~~~~~~~~~~~ 69 (272)
.++...+.|+|.|.+.+.+-+-.+++.+.++..
T Consensus 184 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~ 216 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVY 216 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTH
T ss_pred HHHHHHHhCCCEEEEecCccccCCHHHHHHHhH
Confidence 334445779999998887654345555555444
No 133
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}
Probab=20.58 E-value=1.1e+02 Score=23.52 Aligned_cols=22 Identities=27% Similarity=0.187 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCcEEEeCCCCCC
Q psy17819 36 RFIRKAADNGASLIVLPECFNC 57 (272)
Q Consensus 36 ~~i~~A~~~~~dlvvfPE~~~~ 57 (272)
++.+...+.++|||++.|....
T Consensus 17 ~i~~~i~~~~~DIv~LQE~~~~ 38 (256)
T 2jc4_A 17 QVQNLLADNPPDILVLQELKLD 38 (256)
T ss_dssp HHHHHHHSSCCSEEEEECCCSC
T ss_pred HHHHHHHhcCCCEEEEEeeccc
Confidence 3444444579999999998643
No 134
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=20.46 E-value=1.4e+02 Score=24.91 Aligned_cols=40 Identities=5% Similarity=0.060 Sum_probs=27.1
Q ss_pred CCCcEEEeCCCCC-CCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEEe
Q psy17819 44 NGASLIVLPECFN-CPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVGG 94 (272)
Q Consensus 44 ~~~dlvvfPE~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 94 (272)
.++.+|++|.... +|. ..+ .+.++.+.++|+++++.+++-
T Consensus 163 ~~~~~v~~~~~~nptG~----------~~~-~~~l~~i~~~~~~~~~~li~D 203 (399)
T 1c7n_A 163 KNNKALLFCSPHNPVGR----------VWK-KDELQKIKDIVLKSDLMLWSD 203 (399)
T ss_dssp TTEEEEEEESSBTTTTB----------CCC-HHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCcEEEEcCCCCCCCc----------CcC-HHHHHHHHHHHHHcCCEEEEE
Confidence 4678888765432 221 122 456888999999999998886
No 135
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=20.32 E-value=1.2e+02 Score=24.83 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCc-EEEeCCCCCCCCCcchhhhhhhhcCCChHHHHHHHHHHHcCcEEEE
Q psy17819 30 NLENAVRFIRKAADNGAS-LIVLPECFNCPYGTKYFREYSEEIGSGITSKTLSNVAKEKEIFLVG 93 (272)
Q Consensus 30 n~~~~~~~i~~A~~~~~d-lvvfPE~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (272)
+++...++.+.|.+.|+| ++|.|=+... .......+.++.+|...++.|++
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~-------------~s~~~l~~~f~~va~a~~lPiil 131 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCVAGYYNR-------------PSQEGLYQHFKMVHDAIDIPIIV 131 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTTTC-------------CCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCC-------------CCHHHHHHHHHHHHHhcCCCEEE
No 136
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=20.30 E-value=3.1e+02 Score=21.40 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEeC
Q psy17819 28 NKNLENAVRFIRKAADNGASLIVLP 52 (272)
Q Consensus 28 ~~n~~~~~~~i~~A~~~~~dlvvfP 52 (272)
+..++.+.+.++.|.+-|++.|++.
T Consensus 85 ~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (285)
T 1qtw_A 85 EKSRDAFIDEMQRCEQLGLSLLNFH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 4578888999999999999988763
No 137
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=20.20 E-value=1.9e+02 Score=20.70 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=31.9
Q ss_pred ccEEEEEeec-cCCCHHHHHHHHHHHHHHHHHCCCcEEEeC
Q psy17819 13 SFKIALVQMT-VGKDKNKNLENAVRFIRKAADNGASLIVLP 52 (272)
Q Consensus 13 ~iria~~Q~~-~~~~~~~n~~~~~~~i~~A~~~~~dlvvfP 52 (272)
++.+|++..+ ...+.++.+++....+.+|++.|-+-+++.
T Consensus 129 ~~siGi~~~~~~~~~~~~ll~~A~~Al~~Ak~~g~n~~~~~ 169 (177)
T 3ign_A 129 TVSMGIAQLTETPENYMQWMQKADEALYKAKESGRNKVVVS 169 (177)
T ss_dssp CEEEEEEECCSCCSSHHHHHHHHHHHHHHHHHTTSSSEEEC
T ss_pred EEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHcCCCcEeec
Confidence 5889999887 446888999999999999998876655554
Done!