Query psy17820
Match_columns 210
No_of_seqs 250 out of 2067
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 23:52:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17820.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17820hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0930|consensus 100.0 1E-34 2.3E-39 221.4 11.0 162 48-209 198-373 (395)
2 cd01252 PH_cytohesin Cytohesin 99.9 1.3E-23 2.8E-28 148.6 13.3 110 100-209 1-111 (125)
3 cd01233 Unc104 Unc-104 pleckst 99.9 2E-23 4.4E-28 141.8 12.3 91 99-209 2-96 (100)
4 cd01260 PH_CNK Connector enhan 99.9 4.2E-23 9.1E-28 139.5 12.3 92 100-210 1-96 (96)
5 cd01251 PH_centaurin_alpha Cen 99.9 1.4E-22 3E-27 138.3 11.6 90 101-210 1-99 (103)
6 cd01247 PH_GPBP Goodpasture an 99.9 3.4E-22 7.3E-27 133.1 12.0 89 101-210 1-91 (91)
7 cd01264 PH_melted Melted pleck 99.9 4.2E-22 9.1E-27 133.6 11.2 90 101-210 2-100 (101)
8 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 1E-21 2.2E-26 132.1 11.2 88 101-209 1-92 (95)
9 cd01238 PH_Tec Tec pleckstrin 99.9 1.5E-21 3.1E-26 133.9 11.9 91 100-210 1-106 (106)
10 cd01245 PH_RasGAP_CG5898 RAS G 99.9 3.2E-21 7E-26 128.9 10.2 90 101-209 1-97 (98)
11 cd01235 PH_SETbf Set binding f 99.9 1.3E-20 2.8E-25 128.5 12.1 90 101-210 1-100 (101)
12 cd01257 PH_IRS Insulin recepto 99.9 1.7E-20 3.6E-25 126.6 12.1 88 99-210 2-101 (101)
13 cd01236 PH_outspread Outspread 99.8 2.7E-20 5.7E-25 126.1 11.4 89 101-209 1-102 (104)
14 cd01266 PH_Gab Gab (Grb2-assoc 99.8 7E-20 1.5E-24 126.2 10.7 90 101-210 1-107 (108)
15 cd01246 PH_oxysterol_bp Oxyste 99.8 2.2E-19 4.8E-24 119.9 12.6 89 101-210 1-91 (91)
16 cd01250 PH_centaurin Centaurin 99.8 3.1E-19 6.8E-24 119.9 12.1 90 101-210 1-94 (94)
17 cd01241 PH_Akt Akt pleckstrin 99.8 4.3E-18 9.4E-23 115.9 11.4 95 100-210 2-101 (102)
18 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 1.2E-17 2.7E-22 112.1 12.0 77 113-210 19-98 (98)
19 PF00169 PH: PH domain; Inter 99.8 2.1E-17 4.5E-22 112.3 12.3 91 100-209 2-101 (104)
20 cd01263 PH_anillin Anillin Ple 99.7 1.7E-17 3.6E-22 115.3 10.6 104 100-210 2-122 (122)
21 cd01256 PH_dynamin Dynamin ple 99.7 2.9E-17 6.3E-22 106.8 10.5 97 100-208 2-102 (110)
22 cd01253 PH_beta_spectrin Beta- 99.7 4.7E-16 1E-20 106.5 11.2 91 101-210 1-104 (104)
23 cd01219 PH_FGD FGD (faciogenit 99.7 1.7E-15 3.7E-20 102.9 11.5 91 99-209 2-97 (101)
24 PF15409 PH_8: Pleckstrin homo 99.7 2.6E-15 5.6E-20 98.0 11.0 85 103-210 1-88 (89)
25 cd01233 Unc104 Unc-104 pleckst 99.6 2.8E-15 6.1E-20 101.7 8.4 73 7-79 2-96 (100)
26 cd01230 PH_EFA6 EFA6 Pleckstri 99.6 1.1E-14 2.3E-19 100.8 11.3 90 101-209 2-109 (117)
27 cd01237 Unc112 Unc-112 pleckst 99.6 1E-14 2.2E-19 97.7 9.5 82 112-209 17-101 (106)
28 cd01254 PH_PLD Phospholipase D 99.6 2.8E-14 6.1E-19 100.0 11.4 77 114-210 32-121 (121)
29 cd01251 PH_centaurin_alpha Cen 99.6 4.4E-15 9.5E-20 101.2 6.9 72 9-80 1-99 (103)
30 KOG0930|consensus 99.6 1.8E-15 3.8E-20 116.4 5.3 52 2-53 255-308 (395)
31 PF15413 PH_11: Pleckstrin hom 99.6 1.9E-14 4.2E-19 99.5 10.1 103 101-210 1-112 (112)
32 smart00233 PH Pleckstrin homol 99.6 1.3E-13 2.9E-18 92.4 12.5 92 100-210 2-100 (102)
33 cd01247 PH_GPBP Goodpasture an 99.6 2.2E-14 4.8E-19 95.4 8.3 71 9-79 1-90 (91)
34 cd01220 PH_CDEP Chondrocyte-de 99.5 1.1E-13 2.4E-18 93.2 11.2 89 100-209 3-95 (99)
35 cd01238 PH_Tec Tec pleckstrin 99.5 3.2E-14 7E-19 97.5 7.8 37 8-44 1-42 (106)
36 cd01264 PH_melted Melted pleck 99.5 5.3E-14 1.1E-18 94.5 7.8 72 9-80 2-100 (101)
37 cd01235 PH_SETbf Set binding f 99.5 8.6E-14 1.9E-18 94.7 7.8 38 9-46 1-40 (101)
38 cd00821 PH Pleckstrin homology 99.5 4.5E-13 9.8E-18 88.9 10.5 91 101-210 1-96 (96)
39 cd01265 PH_PARIS-1 PARIS-1 ple 99.5 1.4E-13 3.1E-18 92.5 7.5 72 9-80 1-93 (95)
40 cd01257 PH_IRS Insulin recepto 99.5 2E-13 4.3E-18 92.2 7.9 69 6-78 1-99 (101)
41 cd01260 PH_CNK Connector enhan 99.5 2.7E-13 5.7E-18 91.4 8.6 73 8-80 1-96 (96)
42 cd01252 PH_cytohesin Cytohesin 99.5 2.4E-13 5.1E-18 96.1 8.0 39 8-46 1-39 (125)
43 PF15410 PH_9: Pleckstrin homo 99.5 1.8E-12 4E-17 90.6 12.0 90 101-209 2-116 (119)
44 cd00900 PH-like Pleckstrin hom 99.4 6E-12 1.3E-16 84.0 12.5 93 101-210 1-99 (99)
45 cd01236 PH_outspread Outspread 99.4 7.9E-13 1.7E-17 89.6 7.6 71 9-79 1-102 (104)
46 cd01266 PH_Gab Gab (Grb2-assoc 99.4 8.8E-13 1.9E-17 90.8 7.0 71 9-79 1-106 (108)
47 cd01234 PH_CADPS CADPS (Ca2+-d 99.4 6.6E-13 1.4E-17 87.3 5.9 100 100-208 3-107 (117)
48 cd01241 PH_Akt Akt pleckstrin 99.4 5.5E-12 1.2E-16 85.8 8.9 36 7-42 1-37 (102)
49 cd01245 PH_RasGAP_CG5898 RAS G 99.3 4E-12 8.6E-17 85.1 6.6 71 9-79 1-97 (98)
50 cd01246 PH_oxysterol_bp Oxyste 99.3 1.8E-11 3.9E-16 81.4 7.9 36 9-44 1-36 (91)
51 PF15413 PH_11: Pleckstrin hom 99.3 1.8E-11 3.9E-16 84.6 7.6 34 9-42 1-36 (112)
52 cd01244 PH_RasGAP_CG9209 RAS_G 99.2 5.2E-11 1.1E-15 80.0 7.5 69 11-79 5-97 (98)
53 cd01250 PH_centaurin Centaurin 99.2 9E-11 2E-15 78.5 8.2 35 9-43 1-36 (94)
54 KOG0248|consensus 99.2 7.9E-12 1.7E-16 106.6 3.5 181 7-208 249-462 (936)
55 cd01249 PH_oligophrenin Oligop 99.2 3.3E-10 7.1E-15 75.9 9.9 90 101-208 1-102 (104)
56 cd01259 PH_Apbb1ip Apbb1ip (Am 99.2 2.4E-10 5.3E-15 76.8 7.9 95 101-208 2-105 (114)
57 PF15409 PH_8: Pleckstrin homo 99.1 2.5E-10 5.4E-15 74.6 6.4 70 11-80 1-88 (89)
58 cd01242 PH_ROK Rok (Rho- assoc 99.1 2.5E-09 5.4E-14 71.9 10.9 91 101-209 2-108 (112)
59 KOG1117|consensus 99.1 6.6E-10 1.4E-14 97.2 8.6 173 4-209 84-277 (1186)
60 cd01239 PH_PKD Protein kinase 99.0 4E-09 8.7E-14 71.3 10.4 68 100-167 1-74 (117)
61 cd01243 PH_MRCK MRCK (myotonic 99.0 6.7E-09 1.4E-13 70.9 10.9 97 100-209 3-117 (122)
62 PF00169 PH: PH domain; Inter 99.0 1.2E-09 2.5E-14 73.8 7.4 37 7-43 1-37 (104)
63 cd01218 PH_phafin2 Phafin2 Pl 99.0 5.5E-09 1.2E-13 70.8 10.5 88 100-209 5-96 (104)
64 cd01263 PH_anillin Anillin Ple 99.0 1.8E-09 4E-14 75.2 7.9 37 7-43 1-39 (122)
65 KOG0690|consensus 99.0 7.8E-10 1.7E-14 88.2 5.6 98 97-210 13-115 (516)
66 cd01261 PH_SOS Son of Sevenles 99.0 1.3E-08 2.8E-13 69.8 10.5 93 98-209 3-107 (112)
67 KOG1090|consensus 98.9 2.5E-10 5.5E-15 101.1 1.8 93 97-209 1632-1729(1732)
68 KOG3640|consensus 98.9 1.4E-09 3E-14 96.0 5.5 106 98-209 989-1104(1116)
69 cd01254 PH_PLD Phospholipase D 98.9 6.6E-09 1.4E-13 72.8 7.1 37 9-45 1-55 (121)
70 cd01256 PH_dynamin Dynamin ple 98.8 1.4E-08 3.1E-13 66.5 5.9 40 7-46 1-42 (110)
71 KOG2059|consensus 98.7 2.8E-08 6.1E-13 85.7 5.6 90 99-209 565-662 (800)
72 cd01253 PH_beta_spectrin Beta- 98.6 2E-07 4.4E-12 63.5 7.5 35 9-43 1-43 (104)
73 KOG3751|consensus 98.6 1.4E-07 3E-12 79.0 7.5 97 97-208 315-421 (622)
74 cd01237 Unc112 Unc-112 pleckst 98.6 1.4E-07 3.1E-12 63.5 5.9 26 19-44 16-41 (106)
75 cd01219 PH_FGD FGD (faciogenit 98.6 3.4E-07 7.4E-12 62.1 7.5 35 7-41 2-36 (101)
76 PF14593 PH_3: PH domain; PDB: 98.6 1E-06 2.2E-11 59.6 9.2 85 97-209 11-97 (104)
77 cd01234 PH_CADPS CADPS (Ca2+-d 98.5 7.5E-08 1.6E-12 63.7 2.7 27 7-33 2-29 (117)
78 KOG0521|consensus 98.5 8.4E-08 1.8E-12 86.0 3.4 91 99-209 274-366 (785)
79 smart00233 PH Pleckstrin homol 98.5 1.2E-06 2.7E-11 58.0 8.4 37 7-43 1-38 (102)
80 KOG0932|consensus 98.5 1.4E-08 2.9E-13 85.6 -1.9 166 21-209 379-615 (774)
81 cd01224 PH_Collybistin Collybi 98.4 1.1E-05 2.3E-10 54.8 11.9 91 100-208 3-104 (109)
82 cd01259 PH_Apbb1ip Apbb1ip (Am 98.4 1.3E-06 2.9E-11 58.9 6.1 37 9-45 2-38 (114)
83 PTZ00267 NIMA-related protein 98.4 1.8E-06 3.8E-11 74.5 8.5 94 97-210 375-475 (478)
84 cd01258 PH_syntrophin Syntroph 98.3 5.4E-06 1.2E-10 56.3 8.1 90 102-209 2-107 (108)
85 cd01240 PH_beta-ARK Beta adren 98.3 6.3E-07 1.4E-11 59.9 3.1 92 98-209 2-96 (116)
86 cd01230 PH_EFA6 EFA6 Pleckstri 98.2 5.7E-06 1.2E-10 57.4 7.2 35 9-43 2-46 (117)
87 KOG1090|consensus 98.2 1.2E-06 2.6E-11 78.5 3.9 50 5-54 1632-1684(1732)
88 cd01222 PH_clg Clg (common-sit 98.2 3.9E-05 8.5E-10 51.3 10.1 89 99-209 4-93 (97)
89 PLN00188 enhanced disease resi 98.2 8.9E-06 1.9E-10 71.4 8.8 95 98-209 3-107 (719)
90 cd00900 PH-like Pleckstrin hom 98.1 2.5E-05 5.5E-10 51.4 8.1 39 9-47 1-43 (99)
91 cd00821 PH Pleckstrin homology 98.1 1.4E-05 3.1E-10 52.2 6.5 35 9-43 1-36 (96)
92 cd01225 PH_Cool_Pix Cool (clon 98.0 0.00014 2.9E-09 49.3 10.1 77 114-209 27-107 (111)
93 cd01220 PH_CDEP Chondrocyte-de 98.0 5.5E-05 1.2E-09 51.0 7.5 36 8-44 3-38 (99)
94 KOG3531|consensus 98.0 2.2E-06 4.9E-11 75.5 0.8 90 100-209 925-1017(1036)
95 KOG1451|consensus 97.9 4.4E-05 9.5E-10 65.3 8.0 124 58-208 233-364 (812)
96 cd01221 PH_ephexin Ephexin Ple 97.9 0.00023 5.1E-09 49.6 10.3 81 114-208 26-119 (125)
97 PF14593 PH_3: PH domain; PDB: 97.9 8.5E-05 1.8E-09 50.3 7.2 45 5-51 11-56 (104)
98 KOG0690|consensus 97.8 1.1E-05 2.3E-10 65.0 2.8 50 5-54 13-66 (516)
99 PLN02866 phospholipase D 97.8 0.00019 4.1E-09 65.8 10.9 109 94-209 177-305 (1068)
100 KOG1117|consensus 97.8 5E-05 1.1E-09 67.5 7.0 90 102-210 495-600 (1186)
101 KOG0248|consensus 97.8 1E-05 2.2E-10 70.1 2.0 89 98-208 248-338 (936)
102 cd01228 PH_BCR-related BCR (br 97.8 0.00012 2.6E-09 48.1 6.5 82 100-209 4-92 (96)
103 cd01226 PH_exo84 Exocyst compl 97.8 0.00055 1.2E-08 45.8 9.8 89 101-209 4-96 (100)
104 KOG3751|consensus 97.8 5.9E-05 1.3E-09 63.7 5.9 42 5-46 315-356 (622)
105 KOG1739|consensus 97.7 4E-05 8.7E-10 64.0 4.5 89 99-209 24-114 (611)
106 PF12814 Mcp5_PH: Meiotic cell 97.7 0.0012 2.7E-08 46.2 11.4 97 101-209 11-119 (123)
107 KOG3723|consensus 97.7 1.5E-05 3.4E-10 67.8 1.0 92 97-208 733-833 (851)
108 cd01223 PH_Vav Vav pleckstrin 97.6 0.00069 1.5E-08 46.5 8.2 92 99-208 4-108 (116)
109 cd01262 PH_PDK1 3-Phosphoinosi 97.6 0.0009 1.9E-08 43.6 8.3 84 100-209 2-86 (89)
110 KOG4424|consensus 97.6 0.00017 3.7E-09 61.7 5.8 100 90-209 263-367 (623)
111 cd01239 PH_PKD Protein kinase 97.5 0.00018 3.8E-09 49.0 4.5 39 8-46 1-39 (117)
112 KOG3543|consensus 97.5 2.3E-05 5E-10 67.6 -0.2 92 98-209 463-563 (1218)
113 PF15406 PH_6: Pleckstrin homo 97.4 0.00068 1.5E-08 45.6 6.2 64 123-209 47-111 (112)
114 PTZ00283 serine/threonine prot 97.4 0.00074 1.6E-08 58.6 8.3 92 99-210 373-488 (496)
115 PF15408 PH_7: Pleckstrin homo 97.4 0.00011 2.4E-09 47.0 2.0 86 102-209 1-95 (104)
116 cd01240 PH_beta-ARK Beta adren 97.3 5.5E-05 1.2E-09 50.7 0.1 43 6-48 2-45 (116)
117 cd01243 PH_MRCK MRCK (myotonic 97.3 0.00054 1.2E-08 47.1 4.6 38 8-45 3-42 (122)
118 PF15404 PH_4: Pleckstrin homo 97.3 0.0079 1.7E-07 45.0 11.1 34 9-42 1-34 (185)
119 KOG0705|consensus 97.3 5.5E-05 1.2E-09 64.5 -0.4 38 6-43 301-341 (749)
120 KOG4424|consensus 97.2 0.00042 9E-09 59.4 4.4 77 112-208 510-592 (623)
121 KOG2059|consensus 96.9 0.001 2.2E-08 58.3 4.2 74 7-80 565-663 (800)
122 PF15410 PH_9: Pleckstrin homo 96.8 0.0072 1.6E-07 42.1 7.2 34 9-42 2-45 (119)
123 cd01242 PH_ROK Rok (Rho- assoc 96.7 0.0039 8.5E-08 42.2 5.0 37 9-45 2-42 (112)
124 cd01231 PH_Lnk LNK-family Plec 96.7 0.013 2.8E-07 39.0 7.1 77 112-209 18-106 (107)
125 cd01232 PH_TRIO Trio pleckstri 96.7 0.062 1.3E-06 37.1 10.7 78 116-209 25-110 (114)
126 PLN00188 enhanced disease resi 96.4 0.0063 1.4E-07 54.1 5.5 37 5-41 2-41 (719)
127 PLN02866 phospholipase D 96.4 0.016 3.4E-07 53.8 8.0 43 3-45 178-240 (1068)
128 KOG1739|consensus 96.4 0.0031 6.7E-08 53.1 3.1 40 7-46 24-63 (611)
129 KOG3640|consensus 96.1 0.0027 5.9E-08 57.4 1.4 41 5-45 988-1030(1116)
130 KOG3551|consensus 96.0 0.0033 7.1E-08 51.6 1.4 123 70-208 260-398 (506)
131 KOG4236|consensus 95.7 0.016 3.5E-07 50.1 4.6 90 99-209 413-521 (888)
132 cd01227 PH_Dbs Dbs (DBL's big 95.5 0.19 4.2E-06 35.6 8.6 75 116-209 30-113 (133)
133 KOG1737|consensus 95.2 0.015 3.3E-07 52.5 2.8 38 7-44 77-114 (799)
134 cd01218 PH_phafin2 Phafin2 Pl 95.0 0.16 3.4E-06 34.5 6.8 30 8-39 5-34 (104)
135 KOG1737|consensus 95.0 0.015 3.2E-07 52.6 2.3 87 99-208 77-165 (799)
136 PF15411 PH_10: Pleckstrin hom 94.8 0.87 1.9E-05 31.5 10.6 79 113-207 19-116 (116)
137 KOG3549|consensus 94.5 0.02 4.2E-07 46.6 1.6 121 70-209 249-384 (505)
138 KOG1738|consensus 94.2 0.0055 1.2E-07 53.2 -2.3 57 98-154 561-620 (638)
139 cd01248 PH_PLC Phospholipase C 94.1 0.8 1.7E-05 31.5 8.8 22 188-209 93-114 (115)
140 cd01249 PH_oligophrenin Oligop 94.1 0.37 8E-06 32.6 6.7 25 9-33 1-27 (104)
141 PF15404 PH_4: Pleckstrin homo 93.8 0.13 2.8E-06 38.6 4.7 49 101-149 1-60 (185)
142 PF15405 PH_5: Pleckstrin homo 93.6 0.66 1.4E-05 33.0 7.8 110 100-209 2-133 (135)
143 PF15408 PH_7: Pleckstrin homo 93.5 0.037 8E-07 35.6 1.1 34 10-45 1-34 (104)
144 cd01261 PH_SOS Son of Sevenles 93.2 0.22 4.8E-06 34.2 4.7 39 5-43 2-40 (112)
145 cd01262 PH_PDK1 3-Phosphoinosi 93.2 0.71 1.5E-05 30.2 6.7 41 7-49 1-42 (89)
146 KOG4807|consensus 92.6 0.00031 6.8E-09 57.4 -11.6 77 113-209 33-112 (593)
147 cd01255 PH_TIAM TIAM Pleckstri 92.5 1.3 2.9E-05 31.5 7.8 80 118-209 52-152 (160)
148 cd01258 PH_syntrophin Syntroph 92.5 0.17 3.7E-06 34.5 3.3 33 11-43 3-39 (108)
149 KOG3523|consensus 90.0 0.64 1.4E-05 40.8 5.0 81 114-208 498-591 (695)
150 PTZ00267 NIMA-related protein 89.2 0.46 1E-05 41.1 3.8 34 5-39 375-408 (478)
151 KOG3727|consensus 89.2 0.043 9.4E-07 47.3 -2.5 78 112-208 372-455 (664)
152 KOG1738|consensus 88.9 0.075 1.6E-06 46.5 -1.3 46 7-52 562-611 (638)
153 KOG2070|consensus 88.4 0.75 1.6E-05 39.5 4.3 75 116-209 326-404 (661)
154 KOG0521|consensus 88.1 0.17 3.6E-06 46.4 0.3 74 5-78 272-365 (785)
155 KOG3723|consensus 87.3 0.45 9.8E-06 41.5 2.4 48 7-54 735-787 (851)
156 KOG3531|consensus 85.7 0.25 5.3E-06 44.9 0.0 40 7-46 924-963 (1036)
157 KOG3543|consensus 85.5 0.18 3.9E-06 44.4 -0.9 27 6-32 463-490 (1218)
158 KOG4407|consensus 85.2 0.039 8.5E-07 52.0 -5.2 96 95-209 919-1039(1973)
159 PF08458 PH_2: Plant pleckstri 82.3 4 8.6E-05 27.9 4.7 22 188-209 80-101 (110)
160 KOG1170|consensus 80.7 0.042 9.2E-07 49.4 -6.5 88 102-209 5-92 (1099)
161 KOG1264|consensus 78.4 3 6.5E-05 38.3 3.9 37 5-41 473-509 (1267)
162 cd01224 PH_Collybistin Collybi 71.3 12 0.00026 25.6 4.6 35 7-41 2-36 (109)
163 PF12814 Mcp5_PH: Meiotic cell 70.9 10 0.00022 26.4 4.5 32 10-41 12-50 (123)
164 KOG3551|consensus 66.2 9.2 0.0002 32.1 3.8 53 139-209 215-269 (506)
165 KOG0705|consensus 64.6 1.6 3.5E-05 38.3 -0.8 37 97-133 300-339 (749)
166 PF04714 BCL_N: BCL7, N-termin 64.2 5.8 0.00012 22.9 1.7 20 20-39 27-46 (52)
167 KOG2996|consensus 62.0 25 0.00054 31.3 5.8 94 97-208 404-508 (865)
168 KOG0517|consensus 61.0 0.28 6.1E-06 48.1 -6.3 90 100-208 2300-2406(2473)
169 KOG1264|consensus 60.8 14 0.00031 34.2 4.3 53 140-209 854-908 (1267)
170 PF15277 Sec3-PIP2_bind: Exocy 55.1 57 0.0012 21.4 5.6 49 140-209 37-86 (91)
171 cd05135 RasGAP_RASAL Ras GTPas 52.3 12 0.00027 30.9 2.4 25 99-123 303-333 (333)
172 cd05128 RasGAP_GAP1_like The G 51.8 8.3 0.00018 31.6 1.3 27 97-123 284-315 (315)
173 cd05394 RasGAP_RASA2 RASA2 (or 49.4 3.7 8.1E-05 33.5 -1.0 26 98-123 282-312 (313)
174 KOG3520|consensus 46.6 16 0.00035 35.0 2.5 22 188-209 698-719 (1167)
175 cd05134 RasGAP_RASA3 RASA3 (or 44.0 6.3 0.00014 32.2 -0.4 27 98-124 279-310 (310)
176 KOG0592|consensus 43.6 27 0.00058 30.9 3.2 82 101-209 453-535 (604)
177 PF06017 Myosin_TH1: Myosin ta 42.7 1.5E+02 0.0032 22.4 7.7 54 98-152 49-107 (199)
178 KOG4095|consensus 40.4 15 0.00032 26.5 1.0 20 20-39 28-47 (165)
179 PTZ00283 serine/threonine prot 39.4 28 0.00061 30.4 2.8 25 7-32 373-397 (496)
180 KOG4047|consensus 36.8 30 0.00066 29.6 2.5 93 97-209 6-115 (429)
181 PF14844 PH_BEACH: PH domain a 33.3 1.5E+02 0.0031 19.6 6.6 51 137-206 53-104 (106)
182 KOG1451|consensus 32.7 37 0.00081 30.3 2.4 30 4-33 262-293 (812)
183 PF06627 DUF1153: Protein of u 32.5 31 0.00067 22.5 1.5 17 194-210 60-76 (90)
184 PHA03001 putative virion core 27.4 75 0.0016 22.3 2.7 18 27-44 55-72 (132)
185 PF10453 NUFIP1: Nuclear fragi 21.6 1.3E+02 0.0028 17.8 2.7 17 188-206 13-29 (56)
186 KOG3521|consensus 21.1 67 0.0014 29.2 1.9 94 100-209 428-524 (846)
No 1
>KOG0930|consensus
Probab=100.00 E-value=1e-34 Score=221.37 Aligned_cols=162 Identities=61% Similarity=1.120 Sum_probs=154.8
Q ss_pred cccCCcceecccceeEEEechh-----------HHHHHHhhhcCCccccCCCCCCccccccCCcceeeEEeecC-ccCCe
Q psy17820 48 LIENSSGRYKSWKRRWFILNDK-----------CLYYFEYTTDKPFKIPEDDGNDLMHTFFNPDKEGWLWKQGG-RYKSW 115 (210)
Q Consensus 48 ~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~~~-~~~~w 115 (210)
.+++++|+|.++.+.||.+|++ +.+.|++|+..++.+|.+++.++.+.+.+|+.+|||.|.++ +.++|
T Consensus 198 sLHNpNVrDkP~lErfi~MNrgineggdlpee~LrnlyeSi~~epFkIPeddgndlthtffnpdREGWLlKlgg~rvktW 277 (395)
T KOG0930|consen 198 SLHNPNVKDKPTLERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGNRVKTW 277 (395)
T ss_pred cccCCCCCCCccHHHHHHHhhccccCCCCcHHHHHHHHHHhcCCCCCCCcccCCcchhhccCccccceeeeecCCcccch
Confidence 3789999999999999999887 89999999999999999999999999999999999999986 77899
Q ss_pred eEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCC--ceeeeeeecCCCCceeeecceEEEEE
Q psy17820 116 KRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSG--FEFIKACKTDSEGKVVEGKHTVYRMS 193 (210)
Q Consensus 116 k~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~--~~~~~~~~~~~~~~~~~~~~r~~~l~ 193 (210)
|||||+|.+++||||.-..+++|+|.|+|.+.+|..++++.+|+||+|+.+. ++.+++|+.+.+|.+|.+.+..|.++
T Consensus 278 KrRWFiLtdNCLYYFe~tTDKEPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIs 357 (395)
T KOG0930|consen 278 KRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRIS 357 (395)
T ss_pred hheeEEeecceeeeeeeccCCCCCcceeccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEee
Confidence 9999999999999999999999999999999999999999999999999886 49999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhc
Q psy17820 194 AATAEEKDEWIKCLSL 209 (210)
Q Consensus 194 a~s~~e~~~Wi~al~~ 209 (210)
|.+.+|+++||.+|++
T Consensus 358 A~~~Ee~~~Wi~sI~a 373 (395)
T KOG0930|consen 358 APTPEEKDEWIKSIKA 373 (395)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999999975
No 2
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.91 E-value=1.3e-23 Score=148.65 Aligned_cols=110 Identities=71% Similarity=1.304 Sum_probs=98.8
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCc-eeeeeeecCC
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGF-EFIKACKTDS 178 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~-~~~~~~~~~~ 178 (210)
+++|||.|+++..+.|++|||+|.++.|+||+++.+..|.+.|+|.++.|...++..++++|+|..++. +.+..|....
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~ 80 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKTES 80 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCceEEEECCCcEEEEcccCCCCeeEEEECCccccccccccccc
Confidence 478999999988899999999999999999999988999999999998888776667889999998875 5677788777
Q ss_pred CCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 179 EGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 179 ~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.|.++.+..+.|+|+|+|++|+.+||.||++
T Consensus 81 ~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~ 111 (125)
T cd01252 81 DGRVVEGNHSVYRISAANDEEMDEWIKSIKA 111 (125)
T ss_pred cccccccCceEEEEECCCHHHHHHHHHHHHH
Confidence 7888888889999999999999999999985
No 3
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.91 E-value=2e-23 Score=141.81 Aligned_cols=91 Identities=24% Similarity=0.448 Sum_probs=81.3
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCC----CCcceEEEEeCCceeeeee
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDR----HKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~----~~~~~f~i~~~~~~~~~~~ 174 (210)
++++|||.|+++..+.|++|||+|+++.|+||+++.+..|.+.|+|.++.+...++. +++++|.|.+++
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~------- 74 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAVCTKH------- 74 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEEECCC-------
Confidence 358999999999889999999999999999999998899999999998887766543 367899998764
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|+|+|+|+|++|+++||.||++
T Consensus 75 -------------rt~~~~A~s~~e~~~Wi~ai~~ 96 (100)
T cd01233 75 -------------RGYLFQALSDKEMIDWLYALNP 96 (100)
T ss_pred -------------CEEEEEcCCHHHHHHHHHHhhh
Confidence 7999999999999999999986
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.90 E-value=4.2e-23 Score=139.52 Aligned_cols=92 Identities=26% Similarity=0.675 Sum_probs=81.1
Q ss_pred cceeeEEeecCc----cCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeee
Q psy17820 100 DKEGWLWKQGGR----YKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 100 ~~~G~L~k~~~~----~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~ 175 (210)
+++|||.|++.. .+.|++|||+|.++.|+||+++++..|.+.|+|.++++....+..++++|.|.+++.
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~------- 73 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEVKKKYAFKVCHPVY------- 73 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhcCCceEEEECCCCC-------
Confidence 479999999754 349999999999999999999999999999999999887765666889999987642
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
++|+|+|+|++|+++||.||+++
T Consensus 74 ------------~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 74 ------------KSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred ------------cEEEEEeCCHHHHHHHHHHHHhC
Confidence 79999999999999999999864
No 5
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.89 E-value=1.4e-22 Score=138.26 Aligned_cols=90 Identities=29% Similarity=0.517 Sum_probs=74.3
Q ss_pred ceeeEEeecCc-cCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCe----EEEEe-cC--C-CCcceEEEEeCCceee
Q psy17820 101 KEGWLWKQGGR-YKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENI----QVREV-HD--R-HKPHCFELFTSGFEFI 171 (210)
Q Consensus 101 ~~G~L~k~~~~-~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~----~v~~~-~~--~-~~~~~f~i~~~~~~~~ 171 (210)
++|||.|+|+. .++|++|||+|+++.|+||+++.+..|.|.|+|..+ +|... ++ . ...++|.|.++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~----- 75 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTP----- 75 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeC-----
Confidence 58999999986 689999999999999999999988999999999753 34321 11 1 22348888776
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+|+|+|+|+|++|+++||.||+.+
T Consensus 76 ---------------~Rty~l~a~s~~e~~~Wi~ai~~v 99 (103)
T cd01251 76 ---------------ERKFLFACETEQDRREWIAAFQNV 99 (103)
T ss_pred ---------------CeEEEEECCCHHHHHHHHHHHHHH
Confidence 489999999999999999999864
No 6
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=3.4e-22 Score=133.11 Aligned_cols=89 Identities=19% Similarity=0.404 Sum_probs=76.4
Q ss_pred ceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCC
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDS 178 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 178 (210)
++|||.|.++..++|++|||||+++.|.||+++.+ ..|+|.|+|..+.+... ..++..|+|....
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~--~~~~~~F~i~~~~----------- 67 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKAIIAAH--EFDENRFDISVNE----------- 67 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECcccEEEcC--CCCCCEEEEEeCC-----------
Confidence 37999999999999999999999999999999776 34799999999876643 3346789987553
Q ss_pred CCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 179 EGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 179 ~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
.++|+|.|+|++|+++||.||+++
T Consensus 68 --------~r~~~L~A~s~~e~~~Wi~al~~~ 91 (91)
T cd01247 68 --------NVVWYLRAENSQSRLLWMDSVVRE 91 (91)
T ss_pred --------CeEEEEEeCCHHHHHHHHHHHhhC
Confidence 279999999999999999999975
No 7
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.88 E-value=4.2e-22 Score=133.64 Aligned_cols=90 Identities=29% Similarity=0.588 Sum_probs=76.1
Q ss_pred ceeeEEeecC---ccCCeeEEEEEEeCCEEEEeccCCCCCce-eEEEeCCeEEEEecCC-----CCcceEEEEeCCceee
Q psy17820 101 KEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTDKEPR-GIIPLENIQVREVHDR-----HKPHCFELFTSGFEFI 171 (210)
Q Consensus 101 ~~G~L~k~~~---~~~~wk~r~fvL~~~~L~yy~~~~~~~~~-~~i~L~~~~v~~~~~~-----~~~~~f~i~~~~~~~~ 171 (210)
.+|||.++++ ..++|++|||+|+++.|+||++.....|. +.|+|..+..+...+. ..+++|+|.+++
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~---- 77 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD---- 77 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCC----
Confidence 5899999998 78999999999999999999988655555 9999999865443332 236899998885
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
|+|+|+|+|++++++||.+|+.+
T Consensus 78 ----------------rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 78 ----------------KTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred ----------------ceEEEEeCCHHHHHHHHHHHHhh
Confidence 79999999999999999999864
No 8
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.88 E-value=1e-21 Score=132.14 Aligned_cols=88 Identities=25% Similarity=0.514 Sum_probs=74.8
Q ss_pred ceeeEEeecC--ccCCeeEEEEEEeC--CEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeec
Q psy17820 101 KEGWLWKQGG--RYKSWKRRWFILND--KCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 101 ~~G~L~k~~~--~~~~wk~r~fvL~~--~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
.+|||.|.++ ..++|++|||||.+ +.|+||+++.+..|.|.|+|.++.+...++. .+++|+|.+++
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~~-~~~~F~i~t~~--------- 70 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPRE-EKGRFEIHSNN--------- 70 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCCC-CCCEEEEEcCC---------
Confidence 3699999986 36899999999974 5899999999999999999999766543332 47889988763
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|+|+|+|+|++|+++||.||+.
T Consensus 71 -----------r~y~l~A~s~~e~~~Wi~al~~ 92 (95)
T cd01265 71 -----------EVIALKASSDKQMNYWLQALQS 92 (95)
T ss_pred -----------cEEEEECCCHHHHHHHHHHHHh
Confidence 7999999999999999999985
No 9
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.87 E-value=1.5e-21 Score=133.92 Aligned_cols=91 Identities=26% Similarity=0.344 Sum_probs=74.7
Q ss_pred cceeeEEeecCcc-----CCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCCeEEEE-ecCC-------CCcceEEEE
Q psy17820 100 DKEGWLWKQGGRY-----KSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLENIQVRE-VHDR-------HKPHCFELF 164 (210)
Q Consensus 100 ~~~G~L~k~~~~~-----~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~~~v~~-~~~~-------~~~~~f~i~ 164 (210)
+++|+|.|++.+. ++|++|||||.++.|+||+++.+ ..++|.|+|.++.+.. +.+. .+.++|+|+
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~ 80 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVV 80 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEEEE
Confidence 4799999997432 39999999999999999998876 4799999999876544 2222 246788888
Q ss_pred eCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 165 TSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+++ ++||+.|+|++|+++||.||+++
T Consensus 81 t~~--------------------r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 81 HDE--------------------GTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred eCC--------------------CeEEEEcCCHHHHHHHHHHHHhC
Confidence 764 69999999999999999999975
No 10
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.86 E-value=3.2e-21 Score=128.92 Aligned_cols=90 Identities=31% Similarity=0.562 Sum_probs=80.3
Q ss_pred ceeeEEeecCc-cCCeeEEEEEEeC----CEEEEeccCCCCCceeEEEeCCeEEEEecCC--CCcceEEEEeCCceeeee
Q psy17820 101 KEGWLWKQGGR-YKSWKRRWFILND----KCLYYFEYTTDKEPRGIIPLENIQVREVHDR--HKPHCFELFTSGFEFIKA 173 (210)
Q Consensus 101 ~~G~L~k~~~~-~~~wk~r~fvL~~----~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~--~~~~~f~i~~~~~~~~~~ 173 (210)
+.|||.|+++. .+.||+|||+|.+ +.|+||+++.+..|+|.|+|+.+.|.++.+. ++++||+|+.+..
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~----- 75 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERAL----- 75 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccccccCCCeEEEEecCCC-----
Confidence 36999999987 8999999999987 9999999999999999999999988888776 8899999987742
Q ss_pred eecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 174 CKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+..|+++|++ +|+++||.+|++
T Consensus 76 -------------~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 76 -------------PTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred -------------CeEEEEeCCH-HHHHHHHHHHhc
Confidence 2488999988 999999999986
No 11
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.85 E-value=1.3e-20 Score=128.54 Aligned_cols=90 Identities=29% Similarity=0.598 Sum_probs=73.3
Q ss_pred ceeeEEeecCccCCeeEEEEEEe--CCEEEEeccCCCCCceeEEEeCCeEEEEe-cCC-------CCcceEEEEeCCcee
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILN--DKCLYYFEYTTDKEPRGIIPLENIQVREV-HDR-------HKPHCFELFTSGFEF 170 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~--~~~L~yy~~~~~~~~~~~i~L~~~~v~~~-~~~-------~~~~~f~i~~~~~~~ 170 (210)
++|||.|+|+..+.|++|||+|. ++.|.||+++.+..|.|.|+|..++.... .+. ...++|.|.++
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~---- 76 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTS---- 76 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeC----
Confidence 58999999998999999999998 45999999998899999999998654432 111 23345665544
Q ss_pred eeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 171 IKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
.|+|+|+|+|++|+++||.||+++
T Consensus 77 ----------------~r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 77 ----------------KRTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred ----------------CceEEEECCCHHHHHHHHHHHHhh
Confidence 479999999999999999999863
No 12
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.85 E-value=1.7e-20 Score=126.65 Aligned_cols=88 Identities=31% Similarity=0.537 Sum_probs=74.6
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCC------EEEEeccCCC-----CCceeEEEeCCeEEEE-ecCCCCcceEEEEeC
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDK------CLYYFEYTTD-----KEPRGIIPLENIQVRE-VHDRHKPHCFELFTS 166 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~------~L~yy~~~~~-----~~~~~~i~L~~~~v~~-~~~~~~~~~f~i~~~ 166 (210)
+.++|||.|+ ++|+||||||+++ .|.||+++.. ..|.++|+|.+|.... .++..++++|.|.++
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~ 77 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYTR 77 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEeC
Confidence 5689999996 8999999999987 8999999864 6799999999986543 334455789999887
Q ss_pred CceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 167 GFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+ ++|+|.|+|++|+++|+.+|..+
T Consensus 78 d--------------------r~f~l~aese~E~~~Wi~~i~~~ 101 (101)
T cd01257 78 D--------------------EYFAVAAENEAEQDSWYQALLEL 101 (101)
T ss_pred C--------------------ceEEEEeCCHHHHHHHHHHHhhC
Confidence 5 69999999999999999999753
No 13
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.84 E-value=2.7e-20 Score=126.10 Aligned_cols=89 Identities=26% Similarity=0.391 Sum_probs=71.0
Q ss_pred ceeeEEeecCc---------cCCeeEEEEEEe-CCEEEEeccC-CCCCceeEEEeCCeEEEEec-C-CCCcceEEEEeCC
Q psy17820 101 KEGWLWKQGGR---------YKSWKRRWFILN-DKCLYYFEYT-TDKEPRGIIPLENIQVREVH-D-RHKPHCFELFTSG 167 (210)
Q Consensus 101 ~~G~L~k~~~~---------~~~wk~r~fvL~-~~~L~yy~~~-~~~~~~~~i~L~~~~v~~~~-~-~~~~~~f~i~~~~ 167 (210)
++|||.|.+++ .++|+||||||. ++.|+||++. .+..|.|.|+|..|..+... + .+.+++|.|.+++
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~ 80 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPD 80 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEEECCC
Confidence 47999998642 569999999997 5677777665 46789999999987654422 2 2456899988774
Q ss_pred ceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|+|+|.|+|++|+++||.+|..
T Consensus 81 --------------------R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 81 --------------------KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred --------------------ceEEEEeCCHHHHHHHHHHHHh
Confidence 7999999999999999999974
No 14
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.83 E-value=7e-20 Score=126.21 Aligned_cols=90 Identities=24% Similarity=0.354 Sum_probs=72.2
Q ss_pred ceeeEEeecCc----cCCeeEEEEEEeCCE-------EEEeccCCCCCceeEEEeCCeEEEEec----CC--CCcceEEE
Q psy17820 101 KEGWLWKQGGR----YKSWKRRWFILNDKC-------LYYFEYTTDKEPRGIIPLENIQVREVH----DR--HKPHCFEL 163 (210)
Q Consensus 101 ~~G~L~k~~~~----~~~wk~r~fvL~~~~-------L~yy~~~~~~~~~~~i~L~~~~v~~~~----~~--~~~~~f~i 163 (210)
++|||.|+++. .+.|++|||+|.++. |.||+++.+..|.|.|+|..+.+.... .. ...+.|.|
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i 80 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDI 80 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEEEE
Confidence 48999999873 349999999999876 599999988999999999997654321 11 22355776
Q ss_pred EeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 164 FTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
.++ .|+|+|+|+|++|+++||.+|+++
T Consensus 81 ~t~--------------------~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 81 ETI--------------------VRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EeC--------------------CccEEEEECCHHHHHHHHHHHHhh
Confidence 654 489999999999999999999864
No 15
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.83 E-value=2.2e-19 Score=119.91 Aligned_cols=89 Identities=33% Similarity=0.707 Sum_probs=77.5
Q ss_pred ceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCC--CceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCC
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK--EPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDS 178 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~--~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 178 (210)
++|||.|+++..+.|++|||+|.++.|.||+++.+. .|.+.|+|.++.+... ...+++|.|.++++
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~--~~~~~~F~i~~~~~---------- 68 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGAVISED--DSDDKCFTIDTGGD---------- 68 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCCCCceEEEEeceEEEEEC--CCCCcEEEEEcCCC----------
Confidence 489999999888999999999999999999999877 8999999999876542 33478999987643
Q ss_pred CCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 179 EGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 179 ~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+.++|+|+|.+|+.+||.||+.+
T Consensus 69 ---------~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 69 ---------KTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred ---------CEEEEECCCHHHHHHHHHHHHhC
Confidence 79999999999999999999864
No 16
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=3.1e-19 Score=119.92 Aligned_cols=90 Identities=30% Similarity=0.662 Sum_probs=77.5
Q ss_pred ceeeEEeecCc-cCCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCCeEEEEecCCC-CcceEEEEeCCceeeeeeec
Q psy17820 101 KEGWLWKQGGR-YKSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLENIQVREVHDRH-KPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 101 ~~G~L~k~~~~-~~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~~~v~~~~~~~-~~~~f~i~~~~~~~~~~~~~ 176 (210)
++|||.|+++. .+.|++|||+|.++.|.||+++.+ ..+.+.|+|..+++...+... ++++|.|.+++
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~--------- 71 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVISPT--------- 71 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccceEEecCccccCCceEEEEEcCC---------
Confidence 58999999865 789999999999999999998876 567889999988877665543 78999998764
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
++|+|+|+|++++++|+.||+.+
T Consensus 72 -----------~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 72 -----------KTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred -----------cEEEEECCCHHHHHHHHHHHhcC
Confidence 69999999999999999999863
No 17
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.78 E-value=4.3e-18 Score=115.92 Aligned_cols=95 Identities=27% Similarity=0.556 Sum_probs=69.6
Q ss_pred cceeeEEeecCccCCeeEEEEEEe-CCEEEEeccCCCCCceeEEEeCCeEEEEe----cCCCCcceEEEEeCCceeeeee
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILN-DKCLYYFEYTTDKEPRGIIPLENIQVREV----HDRHKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~-~~~L~yy~~~~~~~~~~~i~L~~~~v~~~----~~~~~~~~f~i~~~~~~~~~~~ 174 (210)
+++|||.|+++..+.|++|||+|+ ++.|.||++.....+.+.++|.+..+... .+..++++|.|...+.
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~------ 75 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQW------ 75 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccC------
Confidence 589999999999999999999999 78888888765544457788877665322 2335668899873210
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
..+..| +|+|+|++|+++||.||+.+
T Consensus 76 --------~~~~~r--~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 76 --------TTVIER--TFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred --------CcccCE--EEEeCCHHHHHHHHHHHHhh
Confidence 001124 34689999999999999875
No 18
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.77 E-value=1.2e-17 Score=112.07 Aligned_cols=77 Identities=17% Similarity=0.338 Sum_probs=65.5
Q ss_pred CCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEE-ecCC--CCcceEEEEeCCceeeeeeecCCCCceeeecceE
Q psy17820 113 KSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVRE-VHDR--HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTV 189 (210)
Q Consensus 113 ~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~-~~~~--~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~ 189 (210)
.+||+|||+|.+..|+||+++. ..|.|.|+|..+..+. +.+. +.+++|+|++++ ++
T Consensus 19 ~n~KkRwF~Lt~~~L~Y~k~~~-~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~--------------------r~ 77 (98)
T cd01244 19 LHFKKRYFQLTTTHLSWAKDVQ-CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCED--------------------DT 77 (98)
T ss_pred cCCceeEEEECCCEEEEECCCC-CceeeeEEccceEEEEEcCCcccCCCceEEEEeCC--------------------Ce
Confidence 5899999999999999999875 6899999999876544 3332 456899998874 69
Q ss_pred EEEEcCCHHHHHHHHHHHhcC
Q psy17820 190 YRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 190 ~~l~a~s~~e~~~Wi~al~~~ 210 (210)
|||+|+|++|+++||.||+.+
T Consensus 78 ~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 78 MQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred EEEECCCHHHHHHHHHHHhcC
Confidence 999999999999999999874
No 19
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.76 E-value=2.1e-17 Score=112.35 Aligned_cols=91 Identities=37% Similarity=0.779 Sum_probs=81.5
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCC---CCCceeEEEeCCeEEEEecCC------CCcceEEEEeCCcee
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTT---DKEPRGIIPLENIQVREVHDR------HKPHCFELFTSGFEF 170 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~---~~~~~~~i~L~~~~v~~~~~~------~~~~~f~i~~~~~~~ 170 (210)
.++|||.+++...+.|++|||+|.++.|++|+++. ...+.+.|+|.++.|....+. ..+++|.|..+.+
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~-- 79 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNG-- 79 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTS--
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCC--
Confidence 47999999998788999999999999999999987 578999999999988876554 5789999988863
Q ss_pred eeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 171 IKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.++|+|+|++++..|+.+|+.
T Consensus 80 -----------------~~~~~~~~s~~~~~~W~~~i~~ 101 (104)
T PF00169_consen 80 -----------------KSYLFSAESEEERKRWIQAIQK 101 (104)
T ss_dssp -----------------EEEEEEESSHHHHHHHHHHHHH
T ss_pred -----------------cEEEEEcCCHHHHHHHHHHHHH
Confidence 6999999999999999999985
No 20
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=1.7e-17 Score=115.33 Aligned_cols=104 Identities=26% Similarity=0.471 Sum_probs=76.4
Q ss_pred cceeeEEee--cCccCCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEec-----CCCCcceEEEEeCCc-
Q psy17820 100 DKEGWLWKQ--GGRYKSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVH-----DRHKPHCFELFTSGF- 168 (210)
Q Consensus 100 ~~~G~L~k~--~~~~~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~-----~~~~~~~f~i~~~~~- 168 (210)
...|||... .++.++|++|||+|.|+.|+||+.+.+ ..|.|.|+|.+|.+..+. ...++++|.|.....
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~ 81 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPK 81 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEeccc
Confidence 468999863 267889999999999999999997766 679999999998876663 337889999864311
Q ss_pred ------eeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 169 ------EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
..+-.|+. +.. ..-++|+|||.+|+++|+.||++.
T Consensus 82 ~~~~~~~~~~~~~~------~~~-r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 82 METDDETLVSQCRR------GIE-RLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ccccccceeeccCC------cee-EEEEEEecCCHHHHHHHHHHHhcC
Confidence 11111111 001 123689999999999999999863
No 21
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.74 E-value=2.9e-17 Score=106.77 Aligned_cols=97 Identities=26% Similarity=0.514 Sum_probs=83.7
Q ss_pred cceeeEEeec-CccC-CeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecC--CCCcceEEEEeCCceeeeeee
Q psy17820 100 DKEGWLWKQG-GRYK-SWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHD--RHKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 100 ~~~G~L~k~~-~~~~-~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~--~~~~~~f~i~~~~~~~~~~~~ 175 (210)
++.|||...+ +.++ +-|+|||||+..+|+||++.++++|++.|+|.+..+..+++ .+++++|+|..+++
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~------- 74 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDG------- 74 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeeccccEEEeecccccCCCcEEEEEcCcc-------
Confidence 5789998876 3333 57999999999999999999999999999999999999887 58889999998764
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
..+....+++.|+|+|+++++.|...+-
T Consensus 75 -----rnvykd~k~lel~~~~~e~vdswkasfl 102 (110)
T cd01256 75 -----RNVYKDYKQLELGCETLEEVDSWKASFL 102 (110)
T ss_pred -----cccccchheeeecCCCHHHHHHHHHHHH
Confidence 4456667899999999999999988764
No 22
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.69 E-value=4.7e-16 Score=106.50 Aligned_cols=91 Identities=22% Similarity=0.364 Sum_probs=70.7
Q ss_pred ceeeEEeec--------CccCCeeEEEEEEeCCEEEEeccCCCC--Ccee--EEEeCCeEEEEecC-CCCcceEEEEeCC
Q psy17820 101 KEGWLWKQG--------GRYKSWKRRWFILNDKCLYYFEYTTDK--EPRG--IIPLENIQVREVHD-RHKPHCFELFTSG 167 (210)
Q Consensus 101 ~~G~L~k~~--------~~~~~wk~r~fvL~~~~L~yy~~~~~~--~~~~--~i~L~~~~v~~~~~-~~~~~~f~i~~~~ 167 (210)
++|+|..+. ...+.|++|||+|.++.|++|+++... ...+ .|+|.++.+...++ .+++++|.|..++
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~ 80 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPD 80 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEecC
Confidence 368887541 135689999999999999999987543 2333 67777777766554 4678999998665
Q ss_pred ceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+ +.|+|+|+|++++.+|+.||+.|
T Consensus 81 ~-------------------~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 81 G-------------------AEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred C-------------------CEEEEECCCHHHHHHHHHHHhcC
Confidence 3 69999999999999999999876
No 23
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.66 E-value=1.7e-15 Score=102.93 Aligned_cols=91 Identities=23% Similarity=0.337 Sum_probs=76.4
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCC-----CCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeee
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTT-----DKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKA 173 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~-----~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~ 173 (210)
.+++|||.|.++..+.|+.|||.|-++.|.|++... ...+.+.|+|.++.|....+...+++|.|..+.
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~~~~~~~F~I~~~~------ 75 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDNLERPHSFLVSGKQ------ 75 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCCCCcCceEEEecCC------
Confidence 368999999998888999999999988999998532 234567899999988776555678999987653
Q ss_pred eecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 174 CKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
++++|+|+|++|+++||.||+.
T Consensus 76 --------------rsf~l~A~s~eEk~~W~~ai~~ 97 (101)
T cd01219 76 --------------RCLELQARTQKEKNDWVQAIFS 97 (101)
T ss_pred --------------cEEEEEcCCHHHHHHHHHHHHH
Confidence 7999999999999999999985
No 24
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.66 E-value=2.6e-15 Score=98.01 Aligned_cols=85 Identities=21% Similarity=0.531 Sum_probs=70.1
Q ss_pred eeEEeec-CccCCeeEEEEEE--eCCEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCC
Q psy17820 103 GWLWKQG-GRYKSWKRRWFIL--NDKCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSE 179 (210)
Q Consensus 103 G~L~k~~-~~~~~wk~r~fvL--~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 179 (210)
|||.|+. ...++|++|||+| ..+.|.||.++++....|.|+|..+.+... . ....+.|.+.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~-~--~~~~I~idsg------------- 64 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISAN-K--KSRRIDIDSG------------- 64 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEec-C--CCCEEEEEcC-------------
Confidence 8988886 4678999999999 999999999998888899999998766443 2 2345666543
Q ss_pred CceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 180 GKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 180 ~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
...|+|.|.|+++.+.|+.||+.+
T Consensus 65 -------~~i~hLKa~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 65 -------DEIWHLKAKSQEDFQRWVSALQKA 88 (89)
T ss_pred -------CeEEEEEcCCHHHHHHHHHHHHhc
Confidence 369999999999999999999875
No 25
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.62 E-value=2.8e-15 Score=101.74 Aligned_cols=73 Identities=14% Similarity=0.223 Sum_probs=53.7
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc-ccc--cCCcce-----------------ecccceeEEEe
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA-CLI--ENSSGR-----------------YKSWKRRWFIL 66 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~-~~i--~~~~~~-----------------~~~~~~~~~~~ 66 (210)
+.|+|||.|+|+..++|+||||||+++.|.||+++++..+ +.| ..+.+. ..+.+.+++.+
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A 81 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQA 81 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEc
Confidence 5799999999999999999999999999999999887653 222 222221 12334455666
Q ss_pred chh--HHHHHHhhhc
Q psy17820 67 NDK--CLYYFEYTTD 79 (210)
Q Consensus 67 ~~~--~~~~~~~i~~ 79 (210)
+++ +..|+.+|+.
T Consensus 82 ~s~~e~~~Wi~ai~~ 96 (100)
T cd01233 82 LSDKEMIDWLYALNP 96 (100)
T ss_pred CCHHHHHHHHHHhhh
Confidence 554 8899998864
No 26
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.62 E-value=1.1e-14 Score=100.83 Aligned_cols=90 Identities=23% Similarity=0.396 Sum_probs=72.5
Q ss_pred ceeeEEeec-----C-----ccCCeeEEEEEEeCCEEEEeccCCC-------CCceeEEEeCCeEEEE-ecCCCCcceEE
Q psy17820 101 KEGWLWKQG-----G-----RYKSWKRRWFILNDKCLYYFEYTTD-------KEPRGIIPLENIQVRE-VHDRHKPHCFE 162 (210)
Q Consensus 101 ~~G~L~k~~-----~-----~~~~wk~r~fvL~~~~L~yy~~~~~-------~~~~~~i~L~~~~v~~-~~~~~~~~~f~ 162 (210)
++|+|..+- + +...|+++||||+++.|++|+++.. ......|.|.++.+.. .+..++++.|.
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~ 81 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHVFR 81 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcEEE
Confidence 578887651 1 2458999999999999999999854 3345678888877544 34568899999
Q ss_pred EEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 163 LFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|.++++ +.|.|+|.+.+||+.||.+|+.
T Consensus 82 L~~~~g-------------------~~~lfqA~~~ee~~~Wi~~I~~ 109 (117)
T cd01230 82 LRTADW-------------------REFLFQTSSLKELQSWIERINV 109 (117)
T ss_pred EEcCCC-------------------CEEEEECCCHHHHHHHHHHHHH
Confidence 998864 6999999999999999999985
No 27
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.60 E-value=1e-14 Score=97.72 Aligned_cols=82 Identities=17% Similarity=0.374 Sum_probs=63.4
Q ss_pred cCCeeEEEEEEeCCEEEEeccCCCCC--ceeEEEeCCeEEEEec-CCCCcceEEEEeCCceeeeeeecCCCCceeeecce
Q psy17820 112 YKSWKRRWFILNDKCLYYFEYTTDKE--PRGIIPLENIQVREVH-DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHT 188 (210)
Q Consensus 112 ~~~wk~r~fvL~~~~L~yy~~~~~~~--~~~~i~L~~~~v~~~~-~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r 188 (210)
.++||+|||+|+++.|+||++..+.. |.+.|.|.+|.|..-. -..++++|.+..+.. .+++
T Consensus 17 ~K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~----------------~~~r 80 (106)
T cd01237 17 LKGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTA----------------EGMN 80 (106)
T ss_pred hhhheeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCc----------------cCCe
Confidence 56899999999999999999876644 5555666677665432 135678888876632 2358
Q ss_pred EEEEEcCCHHHHHHHHHHHhc
Q psy17820 189 VYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 189 ~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+|+|.|+|++++.+||.|++.
T Consensus 81 ~y~l~cdsEeqya~Wmaa~rl 101 (106)
T cd01237 81 EVWLRCDNEKQYAKWMAACRL 101 (106)
T ss_pred EEEEECCCHHHHHHHHHHHHH
Confidence 999999999999999999974
No 28
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.59 E-value=2.8e-14 Score=100.03 Aligned_cols=77 Identities=14% Similarity=0.440 Sum_probs=60.8
Q ss_pred CeeEEEEEEeCCEEEEeccCCCCCceeEEEeCC-eEEEEecC------------CCCcceEEEEeCCceeeeeeecCCCC
Q psy17820 114 SWKRRWFILNDKCLYYFEYTTDKEPRGIIPLEN-IQVREVHD------------RHKPHCFELFTSGFEFIKACKTDSEG 180 (210)
Q Consensus 114 ~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~-~~v~~~~~------------~~~~~~f~i~~~~~~~~~~~~~~~~~ 180 (210)
.|++|||+|+++.|.||+++.+..++++|.|.. ..|..... .+..++|.|
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i----------------- 94 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPSSAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKI----------------- 94 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCCCCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEE-----------------
Confidence 699999999999999999999989999999964 34443222 123344554
Q ss_pred ceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 181 KVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 181 ~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
.+++|+|.|.|+|+.++++|+.+|+.+
T Consensus 95 ---~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 95 ---TNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred ---EcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 444699999999999999999999853
No 29
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.58 E-value=4.4e-15 Score=101.24 Aligned_cols=72 Identities=24% Similarity=0.353 Sum_probs=51.4
Q ss_pred eeeEEEeeCCC-CCCceeEEEEEeCCEEEEEeecCCccc-ccccCC------cc-----------------eecccceeE
Q psy17820 9 KEGWLWKQGGR-YKSWKRRWFILNDKCLYYFEYTTDKSA-CLIENS------SG-----------------RYKSWKRRW 63 (210)
Q Consensus 9 ~~G~L~K~g~~-~~~wkrRwfvL~~~~L~Yy~~~~~~~~-~~i~~~------~~-----------------~~~~~~~~~ 63 (210)
|+|||.|+|+. .++||||||||+++.|+||+++.+..+ +.|... ++ ...+.+.++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~ 80 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFL 80 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeEEE
Confidence 68999999995 699999999999999999999877543 333211 11 011234455
Q ss_pred EEechh--HHHHHHhhhcC
Q psy17820 64 FILNDK--CLYYFEYTTDK 80 (210)
Q Consensus 64 ~~~~~~--~~~~~~~i~~~ 80 (210)
+.+++. +..|+++|...
T Consensus 81 l~a~s~~e~~~Wi~ai~~v 99 (103)
T cd01251 81 FACETEQDRREWIAAFQNV 99 (103)
T ss_pred EECCCHHHHHHHHHHHHHH
Confidence 666554 88999988754
No 30
>KOG0930|consensus
Probab=99.58 E-value=1.8e-15 Score=116.44 Aligned_cols=52 Identities=71% Similarity=1.404 Sum_probs=45.8
Q ss_pred CCCCCCCeeeEEEeeCC-CCCCceeEEEEEeCCEEEEEeecCCccc-ccccCCc
Q psy17820 2 HTFFNPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKSA-CLIENSS 53 (210)
Q Consensus 2 ~~~~~~~~~G~L~K~g~-~~~~wkrRwfvL~~~~L~Yy~~~~~~~~-~~i~~~~ 53 (210)
|||.++..+|||.|+|+ ..++||||||+|+++||+||.-.+|++| ++|...+
T Consensus 255 htffnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDKEPrGIIpLeN 308 (395)
T KOG0930|consen 255 HTFFNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLEN 308 (395)
T ss_pred hhccCccccceeeeecCCcccchhheeEEeecceeeeeeeccCCCCCcceeccc
Confidence 78999999999999999 7899999999999999999999999886 4544443
No 31
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.58 E-value=1.9e-14 Score=99.46 Aligned_cols=103 Identities=25% Similarity=0.375 Sum_probs=49.9
Q ss_pred ceeeEEeecCc-cCCeeEEEEEEe-CCEEEEeccCCCCCceeEEEeCCe-------EEEEecCCCCcceEEEEeCCceee
Q psy17820 101 KEGWLWKQGGR-YKSWKRRWFILN-DKCLYYFEYTTDKEPRGIIPLENI-------QVREVHDRHKPHCFELFTSGFEFI 171 (210)
Q Consensus 101 ~~G~L~k~~~~-~~~wk~r~fvL~-~~~L~yy~~~~~~~~~~~i~L~~~-------~v~~~~~~~~~~~f~i~~~~~~~~ 171 (210)
++|||+|++.. .++|++|||+|. ++.|.||+.+.+.. .+.|..+.. .+...... ......... ..
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~ 74 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKK-DVRIIGEESSRVIRKGDWSISRRS---SRIQGIKDK--NP 74 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS--------------TT-SB-SEEEE---GG---GT-EEEES---T-
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccc-cccccccchhceEeecccCccccc---ccccccccC--Cc
Confidence 58999999987 889999999999 99999999943211 111111100 00000000 000000000 00
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+.+.+. ....+.++.++|+|.|++.+|+.+||+||++|
T Consensus 75 ~~~~~~-~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 75 FGEIHL-KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -SS-SS-EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred ccCcCC-CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 111110 11123455689999999999999999999975
No 32
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.56 E-value=1.3e-13 Score=92.45 Aligned_cols=92 Identities=42% Similarity=0.848 Sum_probs=77.9
Q ss_pred cceeeEEeecC-ccCCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEecCC---CCcceEEEEeCCceeee
Q psy17820 100 DKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVHDR---HKPHCFELFTSGFEFIK 172 (210)
Q Consensus 100 ~~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~~~---~~~~~f~i~~~~~~~~~ 172 (210)
.++|||.++.. ....|+++||+|.++.|.+|++... ..+.+.|+|.++.+....+. ..+++|.|....+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~---- 77 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADR---- 77 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCC----
Confidence 57999999886 6679999999999999999998765 56789999999987776554 4678999887642
Q ss_pred eeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 173 ACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
..++|+|+|++++..|+.+|+.+
T Consensus 78 ---------------~~~~f~~~s~~~~~~W~~~i~~~ 100 (102)
T smart00233 78 ---------------RSYLLQAESEEEREEWVDALRKA 100 (102)
T ss_pred ---------------ceEEEEcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999853
No 33
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.56 E-value=2.2e-14 Score=95.44 Aligned_cols=71 Identities=18% Similarity=0.270 Sum_probs=50.0
Q ss_pred eeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCcc---cccccCCc--cee------------cccceeEEEechh--
Q psy17820 9 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKS---ACLIENSS--GRY------------KSWKRRWFILNDK-- 69 (210)
Q Consensus 9 ~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~---~~~i~~~~--~~~------------~~~~~~~~~~~~~-- 69 (210)
.+|||.|+|...++|++|||||+++.|+||+++.+.. .+.|+... +.. ...+..++.+++.
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e 80 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQS 80 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHH
Confidence 4799999999999999999999999999999987743 23333222 111 1113344555444
Q ss_pred HHHHHHhhhc
Q psy17820 70 CLYYFEYTTD 79 (210)
Q Consensus 70 ~~~~~~~i~~ 79 (210)
...|+++|..
T Consensus 81 ~~~Wi~al~~ 90 (91)
T cd01247 81 RLLWMDSVVR 90 (91)
T ss_pred HHHHHHHHhh
Confidence 8889988864
No 34
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.55 E-value=1.1e-13 Score=93.24 Aligned_cols=89 Identities=29% Similarity=0.512 Sum_probs=70.0
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCC---CceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeee
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK---EPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~---~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~ 175 (210)
+++|+|.|.++. +.|+|+||.+.+..||+.....+. .+.+.|+|.++.|..+++. +.+++|+|..+.
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~I~~~~-------- 73 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHEWGVPHCFTIFGGQ-------- 73 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEeeccCCcCCceeEEEEcCC--------
Confidence 589999998864 466766666666666655544333 4789999999999887663 568999998663
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+++.|+|+|++|+.+|+.+|+.
T Consensus 74 ------------ks~~l~A~s~~Ek~~Wi~~i~~ 95 (99)
T cd01220 74 ------------CAITVAASTRAEKEKWLADLSK 95 (99)
T ss_pred ------------eEEEEECCCHHHHHHHHHHHHH
Confidence 7999999999999999999985
No 35
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.54 E-value=3.2e-14 Score=97.49 Aligned_cols=37 Identities=30% Similarity=0.383 Sum_probs=32.4
Q ss_pred CeeeEEEeeCCCC-----CCceeEEEEEeCCEEEEEeecCCc
Q psy17820 8 DKEGWLWKQGGRY-----KSWKRRWFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 8 ~~~G~L~K~g~~~-----~~wkrRwfvL~~~~L~Yy~~~~~~ 44 (210)
+++|||+|++++. ++||+|||||++++|+||+++.+.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~ 42 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK 42 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc
Confidence 4799999998654 499999999999999999988763
No 36
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=5.3e-14 Score=94.52 Aligned_cols=72 Identities=22% Similarity=0.307 Sum_probs=52.8
Q ss_pred eeeEEEeeCC---CCCCceeEEEEEeCCEEEEEeecCCc-cc-ccccCCcc--------------------eecccceeE
Q psy17820 9 KEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTDK-SA-CLIENSSG--------------------RYKSWKRRW 63 (210)
Q Consensus 9 ~~G~L~K~g~---~~~~wkrRwfvL~~~~L~Yy~~~~~~-~~-~~i~~~~~--------------------~~~~~~~~~ 63 (210)
.+|||.|+|| ..|+|+||||+|++++|+||++..+. .+ ++|+...+ ...+++.++
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~ 81 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYI 81 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCCceEE
Confidence 5899999999 88999999999999999999987543 22 44433322 112334456
Q ss_pred EEechh--HHHHHHhhhcC
Q psy17820 64 FILNDK--CLYYFEYTTDK 80 (210)
Q Consensus 64 ~~~~~~--~~~~~~~i~~~ 80 (210)
+.++++ .++|+.+|..+
T Consensus 82 l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 82 LKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred EEeCCHHHHHHHHHHHHhh
Confidence 777766 88999988653
No 37
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.50 E-value=8.6e-14 Score=94.67 Aligned_cols=38 Identities=39% Similarity=0.893 Sum_probs=33.7
Q ss_pred eeeEEEeeCCCCCCceeEEEEEe--CCEEEEEeecCCccc
Q psy17820 9 KEGWLWKQGGRYKSWKRRWFILN--DKCLYYFEYTTDKSA 46 (210)
Q Consensus 9 ~~G~L~K~g~~~~~wkrRwfvL~--~~~L~Yy~~~~~~~~ 46 (210)
++|||.|+|+..++|++|||||+ ++.|.||+++++..+
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~ 40 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAE 40 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCcc
Confidence 58999999999999999999998 459999998877553
No 38
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.49 E-value=4.5e-13 Score=88.89 Aligned_cols=91 Identities=40% Similarity=0.805 Sum_probs=76.4
Q ss_pred ceeeEEeecCcc-CCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeee
Q psy17820 101 KEGWLWKQGGRY-KSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 101 ~~G~L~k~~~~~-~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~ 175 (210)
++|||.++.... ..|+++||+|.++.|.+|+...+ ..+.+.|+|.++.+...... +.+++|.|....+
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~------- 73 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTPDG------- 73 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecCCC-------
Confidence 479999887655 79999999999999999998766 67899999999877766554 3578999987642
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+.++|+|+|++|+..|+.+|+.+
T Consensus 74 ------------~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 74 ------------RSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred ------------cEEEEEeCCHHHHHHHHHHHhcC
Confidence 69999999999999999999864
No 39
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.48 E-value=1.4e-13 Score=92.45 Aligned_cols=72 Identities=22% Similarity=0.387 Sum_probs=49.3
Q ss_pred eeeEEEeeCC--CCCCceeEEEEEeC--CEEEEEeecCCccc-ccccCCcc--e------------ecccceeEEEechh
Q psy17820 9 KEGWLWKQGG--RYKSWKRRWFILND--KCLYYFEYTTDKSA-CLIENSSG--R------------YKSWKRRWFILNDK 69 (210)
Q Consensus 9 ~~G~L~K~g~--~~~~wkrRwfvL~~--~~L~Yy~~~~~~~~-~~i~~~~~--~------------~~~~~~~~~~~~~~ 69 (210)
.+|||.|+|+ ..++|++|||||++ +.|+||+++.+..| +.|+...+ . ..+++.+++.++++
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~ 80 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKASSD 80 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCH
Confidence 3799999987 47999999999984 58999999887654 34433321 1 11223344555554
Q ss_pred --HHHHHHhhhcC
Q psy17820 70 --CLYYFEYTTDK 80 (210)
Q Consensus 70 --~~~~~~~i~~~ 80 (210)
+..|+++|...
T Consensus 81 ~e~~~Wi~al~~~ 93 (95)
T cd01265 81 KQMNYWLQALQSK 93 (95)
T ss_pred HHHHHHHHHHHhh
Confidence 88899888653
No 40
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.48 E-value=2e-13 Score=92.21 Aligned_cols=69 Identities=23% Similarity=0.297 Sum_probs=49.0
Q ss_pred CCCeeeEEEeeCCCCCCceeEEEEEeCC------EEEEEeecCC-----c-ccccccCCcce----------------ec
Q psy17820 6 NPDKEGWLWKQGGRYKSWKRRWFILNDK------CLYYFEYTTD-----K-SACLIENSSGR----------------YK 57 (210)
Q Consensus 6 ~~~~~G~L~K~g~~~~~wkrRwfvL~~~------~L~Yy~~~~~-----~-~~~~i~~~~~~----------------~~ 57 (210)
++.++|||.|+ +.|+||||||+++ .|.||+++++ . +.++|...++. ..
T Consensus 1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t 76 (101)
T cd01257 1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYT 76 (101)
T ss_pred CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEe
Confidence 47899999998 7999999999977 8999999864 2 33444433321 12
Q ss_pred ccceeEEEechh--HHHHHHhhh
Q psy17820 58 SWKRRWFILNDK--CLYYFEYTT 78 (210)
Q Consensus 58 ~~~~~~~~~~~~--~~~~~~~i~ 78 (210)
+.+.+++.++++ ++.|+.+|.
T Consensus 77 ~dr~f~l~aese~E~~~Wi~~i~ 99 (101)
T cd01257 77 RDEYFAVAAENEAEQDSWYQALL 99 (101)
T ss_pred CCceEEEEeCCHHHHHHHHHHHh
Confidence 233445666655 889998875
No 41
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.48 E-value=2.7e-13 Score=91.43 Aligned_cols=73 Identities=27% Similarity=0.571 Sum_probs=50.2
Q ss_pred CeeeEEEeeCCC----CCCceeEEEEEeCCEEEEEeecCCccc-ccc--cCCcce-------------eccc-ceeEEEe
Q psy17820 8 DKEGWLWKQGGR----YKSWKRRWFILNDKCLYYFEYTTDKSA-CLI--ENSSGR-------------YKSW-KRRWFIL 66 (210)
Q Consensus 8 ~~~G~L~K~g~~----~~~wkrRwfvL~~~~L~Yy~~~~~~~~-~~i--~~~~~~-------------~~~~-~~~~~~~ 66 (210)
.++|||.|+++. .+.|++|||||+++.|+||+++++..+ +.| ....+. ..+. +.+++.+
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a 80 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAA 80 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEe
Confidence 379999999764 449999999999999999999887543 232 222221 1112 3345555
Q ss_pred chh--HHHHHHhhhcC
Q psy17820 67 NDK--CLYYFEYTTDK 80 (210)
Q Consensus 67 ~~~--~~~~~~~i~~~ 80 (210)
++. +..|+.+|+.+
T Consensus 81 ~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 81 ETLDDLSQWVNHLITA 96 (96)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 554 88999988753
No 42
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.47 E-value=2.4e-13 Score=96.12 Aligned_cols=39 Identities=79% Similarity=1.599 Sum_probs=35.4
Q ss_pred CeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 8 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 8 ~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
.++|||.|+|+..+.|++|||||+++.|+||+++++..+
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~ 39 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEP 39 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCc
Confidence 478999999999999999999999999999998876553
No 43
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.46 E-value=1.8e-12 Score=90.61 Aligned_cols=90 Identities=28% Similarity=0.536 Sum_probs=62.5
Q ss_pred ceeeEEeec-----C-----ccCCeeEEEEEEeCCEEEEeccCC--------------CCCceeEEEeCCeEEEEecC-C
Q psy17820 101 KEGWLWKQG-----G-----RYKSWKRRWFILNDKCLYYFEYTT--------------DKEPRGIIPLENIQVREVHD-R 155 (210)
Q Consensus 101 ~~G~L~k~~-----~-----~~~~wk~r~fvL~~~~L~yy~~~~--------------~~~~~~~i~L~~~~v~~~~~-~ 155 (210)
++|+|..+. + ...+|+..|+||+++.|++|+++. ...|.+.|.|.++.+....+ .
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~dY~ 81 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASDYT 81 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETTBT
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcccc
Confidence 689988751 1 244899999999999999999731 12245669999887766544 5
Q ss_pred CCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 156 HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 156 ~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+++++|.|.+.++ ..|.|+|.|++||.+||.+|+.
T Consensus 82 Kr~~VFrL~~~dg-------------------~e~Lfqa~~~~~m~~Wi~~IN~ 116 (119)
T PF15410_consen 82 KRKNVFRLRTADG-------------------SEYLFQASDEEEMNEWIDAINY 116 (119)
T ss_dssp TCSSEEEEE-TTS--------------------EEEEE-SSHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCC-------------------CEEEEECCCHHHHHHHHHHHhh
Confidence 7899999998865 6899999999999999999974
No 44
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.43 E-value=6e-12 Score=83.97 Aligned_cols=93 Identities=40% Similarity=0.735 Sum_probs=74.8
Q ss_pred ceeeEEeecCcc----CCeeEEEEEEeCCEEEEeccCCCCCce-eEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeee
Q psy17820 101 KEGWLWKQGGRY----KSWKRRWFILNDKCLYYFEYTTDKEPR-GIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 101 ~~G~L~k~~~~~----~~wk~r~fvL~~~~L~yy~~~~~~~~~-~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~ 174 (210)
.+|||.+++... ..|+++||+|.++.|.+|+.+....+. +.+++.+..+...++. +.+++|.|.....
T Consensus 1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~------ 74 (99)
T cd00900 1 KEGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDR------ 74 (99)
T ss_pred CccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceEEEECCCCCCCCceEEEECCCC------
Confidence 368999887653 699999999999999999998776655 6899988876554332 4678999987631
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
..+.++|+|+|+++++.|+.+|+.+
T Consensus 75 -----------~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 75 -----------GRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred -----------CcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 1379999999999999999999864
No 45
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.42 E-value=7.9e-13 Score=89.63 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=48.1
Q ss_pred eeeEEEeeCCC---------CCCceeEEEEEe-CCEEEEEeecC-C-cccccccCCcc-----------------eeccc
Q psy17820 9 KEGWLWKQGGR---------YKSWKRRWFILN-DKCLYYFEYTT-D-KSACLIENSSG-----------------RYKSW 59 (210)
Q Consensus 9 ~~G~L~K~g~~---------~~~wkrRwfvL~-~~~L~Yy~~~~-~-~~~~~i~~~~~-----------------~~~~~ 59 (210)
++|||.|.+++ .++||||||||+ ++.|+||++.. + ...+.|+...+ ...+.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~ 80 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPD 80 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEEECCC
Confidence 58999999874 579999999997 56888876552 3 33444432221 12234
Q ss_pred ceeEEEechh--HHHHHHhhhc
Q psy17820 60 KRRWFILNDK--CLYYFEYTTD 79 (210)
Q Consensus 60 ~~~~~~~~~~--~~~~~~~i~~ 79 (210)
+.+++.++++ ++.|++++..
T Consensus 81 R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 81 KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ceEEEEeCCHHHHHHHHHHHHh
Confidence 5566777665 9999998865
No 46
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.40 E-value=8.8e-13 Score=90.76 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=48.3
Q ss_pred eeeEEEeeCC----CCCCceeEEEEEeCCE-------EEEEeecCCccc-ccccCCcc--e-------------------
Q psy17820 9 KEGWLWKQGG----RYKSWKRRWFILNDKC-------LYYFEYTTDKSA-CLIENSSG--R------------------- 55 (210)
Q Consensus 9 ~~G~L~K~g~----~~~~wkrRwfvL~~~~-------L~Yy~~~~~~~~-~~i~~~~~--~------------------- 55 (210)
++|||.|+|+ ..++|+||||||+++. |.||+++.+..+ +.|....+ .
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i 80 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDI 80 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEEEE
Confidence 5899999998 3459999999999875 699998876543 33332221 1
Q ss_pred ecccceeEEEechh--HHHHHHhhhc
Q psy17820 56 YKSWKRRWFILNDK--CLYYFEYTTD 79 (210)
Q Consensus 56 ~~~~~~~~~~~~~~--~~~~~~~i~~ 79 (210)
..+.+.+++.+++. +..|+.+|..
T Consensus 81 ~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 81 ETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EeCCccEEEEECCHHHHHHHHHHHHh
Confidence 01223445555554 9999998853
No 47
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.40 E-value=6.6e-13 Score=87.33 Aligned_cols=100 Identities=21% Similarity=0.407 Sum_probs=70.7
Q ss_pred cceeeEEeecC-ccCCeeEEEEEEeCCEEEEec----cCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeee
Q psy17820 100 DKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFE----YTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 100 ~~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~----~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~ 174 (210)
.++|||.+.|+ ..+.||||||+|.+-.-+.|. .+....|...+.|++.+|.-.++......+.|...++.+.|..
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~a 82 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNA 82 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhhhhe
Confidence 47999999997 788999999999854333221 2335678889999999998776543333445544444333322
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
......+.|+++++.|+..|+.||=
T Consensus 83 ---------vkegd~~~fa~~de~~r~lwvqa~y 107 (117)
T cd01234 83 ---------VKEGDELKFATDDENERHLWVQAMY 107 (117)
T ss_pred ---------eccCcEEEEeccchHHHHHHHHHHH
Confidence 1123589999999999999999984
No 48
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.36 E-value=5.5e-12 Score=85.84 Aligned_cols=36 Identities=36% Similarity=0.768 Sum_probs=32.6
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEe-CCEEEEEeecC
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILN-DKCLYYFEYTT 42 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~-~~~L~Yy~~~~ 42 (210)
++++|||.|+|+..++|++|||+|+ ++.|.||++..
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~ 37 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKP 37 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCC
Confidence 4799999999999999999999999 78999888754
No 49
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.33 E-value=4e-12 Score=85.14 Aligned_cols=71 Identities=17% Similarity=0.089 Sum_probs=50.1
Q ss_pred eeeEEEeeCCC-CCCceeEEEEEeC----CEEEEEeecCCcccc-cc--cCCccee---------------cccc--eeE
Q psy17820 9 KEGWLWKQGGR-YKSWKRRWFILND----KCLYYFEYTTDKSAC-LI--ENSSGRY---------------KSWK--RRW 63 (210)
Q Consensus 9 ~~G~L~K~g~~-~~~wkrRwfvL~~----~~L~Yy~~~~~~~~~-~i--~~~~~~~---------------~~~~--~~~ 63 (210)
+.|||.|+|+. .|.||+|||+|.+ ++|+||++..+..|. +| .++.|.. .+.. .+|
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~ 80 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYY 80 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccccccCCCeEEEEecCCCCeEEE
Confidence 46999999997 9999999999986 999999999987652 32 2232221 1111 234
Q ss_pred EEechh-HHHHHHhhhc
Q psy17820 64 FILNDK-CLYYFEYTTD 79 (210)
Q Consensus 64 ~~~~~~-~~~~~~~i~~ 79 (210)
+.+.++ ...|+++|++
T Consensus 81 ~~a~~~er~~Wi~~l~~ 97 (98)
T cd01245 81 SCRSSEERDKWIESLQA 97 (98)
T ss_pred EeCCHHHHHHHHHHHhc
Confidence 554444 8899988864
No 50
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.29 E-value=1.8e-11 Score=81.40 Aligned_cols=36 Identities=36% Similarity=0.891 Sum_probs=33.7
Q ss_pred eeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCc
Q psy17820 9 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 9 ~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~ 44 (210)
++|||.|+++..+.|++|||||+++.|+||+++++.
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~ 36 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSM 36 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccC
Confidence 589999999988999999999999999999999765
No 51
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.28 E-value=1.8e-11 Score=84.63 Aligned_cols=34 Identities=50% Similarity=1.065 Sum_probs=25.9
Q ss_pred eeeEEEeeCCC-CCCceeEEEEEe-CCEEEEEeecC
Q psy17820 9 KEGWLWKQGGR-YKSWKRRWFILN-DKCLYYFEYTT 42 (210)
Q Consensus 9 ~~G~L~K~g~~-~~~wkrRwfvL~-~~~L~Yy~~~~ 42 (210)
++|||.|.+.. .++||+|||+|. ++.|+||+.+.
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~ 36 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPR 36 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS--
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeeccc
Confidence 68999999996 899999999999 99999999943
No 52
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.22 E-value=5.2e-11 Score=79.98 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=49.2
Q ss_pred eEEEeeCC----CCCCceeEEEEEeCCEEEEEeecCCcccccccCCcce------------------ecccceeEEEech
Q psy17820 11 GWLWKQGG----RYKSWKRRWFILNDKCLYYFEYTTDKSACLIENSSGR------------------YKSWKRRWFILND 68 (210)
Q Consensus 11 G~L~K~g~----~~~~wkrRwfvL~~~~L~Yy~~~~~~~~~~i~~~~~~------------------~~~~~~~~~~~~~ 68 (210)
|.|.|++. ..++||+|||+|++..|+||+++.+...+.|+...+. ..+.+.+|+.+++
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s 84 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQCKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEA 84 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCCCceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCC
Confidence 56677664 2479999999999999999999887665665544432 1223445777766
Q ss_pred h--HHHHHHhhhc
Q psy17820 69 K--CLYYFEYTTD 79 (210)
Q Consensus 69 ~--~~~~~~~i~~ 79 (210)
. ...|+.+++.
T Consensus 85 ~~E~~~Wi~al~k 97 (98)
T cd01244 85 PVEATDWLNALEK 97 (98)
T ss_pred HHHHHHHHHHHhc
Confidence 5 8899988864
No 53
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.21 E-value=9e-11 Score=78.46 Aligned_cols=35 Identities=40% Similarity=0.937 Sum_probs=32.2
Q ss_pred eeeEEEeeCCC-CCCceeEEEEEeCCEEEEEeecCC
Q psy17820 9 KEGWLWKQGGR-YKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 9 ~~G~L~K~g~~-~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
++|||.|+++. .+.|++|||||+++.|.||+++.+
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~ 36 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKD 36 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcc
Confidence 68999999875 899999999999999999998875
No 54
>KOG0248|consensus
Probab=99.21 E-value=7.9e-12 Score=106.57 Aligned_cols=181 Identities=17% Similarity=0.234 Sum_probs=108.6
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCcc---cccccCCcc--e-----------ecccceeEEEechh-
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKS---ACLIENSSG--R-----------YKSWKRRWFILNDK- 69 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~---~~~i~~~~~--~-----------~~~~~~~~~~~~~~- 69 (210)
..++||+.+.+...+.|+||||||+.++++||+..++.. ...++...+ . ...+..+++..++.
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~ 328 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESER 328 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccccccceeeccchhHHhhhhhhceeEEEeccChh
Confidence 367899999998889999999999999999999887743 122222221 0 11223334444333
Q ss_pred -HHHHHHhhhcCCccccCCCCCCccccccCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeE
Q psy17820 70 -CLYYFEYTTDKPFKIPEDDGNDLMHTFFNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQ 148 (210)
Q Consensus 70 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~ 148 (210)
..+|...+.+. +.+.+.-.......--.+..+|||.+.+.+.+ ++.||.|.+-.++||++..+..|.|..++....
T Consensus 329 lt~dw~~iL~~~-iKv~~~~~~a~~~~p~~~~~~GwlT~vk~g~s--kkv~~alv~~~~~~~k~~~d~rp~g~l~~~~~h 405 (936)
T KOG0248|consen 329 TTHDWVTILSAA-IKATTLREMASRVTPIDASISGWLTRVKCGLS--KKVFAALVNQKLMFFKNSNDLVPNGFLCLQEKH 405 (936)
T ss_pred hhhhhHHHHHHH-HHHHhccchhhhcCCCCCCcCcceeeeccccc--eeeeeeeeeeeeEEeecccccccccccchhhhh
Confidence 33333322111 11100000000011123446999999986555 899999999999999999999999998876432
Q ss_pred EEEecCC-----------CC----cceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 149 VREVHDR-----------HK----PHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 149 v~~~~~~-----------~~----~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
+..++.. ++ .++.-++ ..+++.++||.-.+.++.+.|+..+.
T Consensus 406 ~~ee~~s~~sde~~e~~~~r~l~~~~~~l~~------------------~~~~~~p~yLi~~t~e~k~~wly~l~ 462 (936)
T KOG0248|consen 406 NGTEEYSGSSDEQLETTKEHPQRKNNDSLCV------------------QIANEDPVYLILRTSEDKEKWLYYLK 462 (936)
T ss_pred cceeeccCCchhhhhhhcCccccccCceEEe------------------ccCCCCCEEEEeeeccccceeeeeeh
Confidence 2221111 11 1222222 23345688888888888888876654
No 55
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.19 E-value=3.3e-10 Score=75.86 Aligned_cols=90 Identities=20% Similarity=0.373 Sum_probs=64.8
Q ss_pred ceeeEEeecC--ccCCeeEEEEEEeCC--EEE--EeccC-----C-CCCceeEEEeCCeEEEEecCCCCcceEEEEeCCc
Q psy17820 101 KEGWLWKQGG--RYKSWKRRWFILNDK--CLY--YFEYT-----T-DKEPRGIIPLENIQVREVHDRHKPHCFELFTSGF 168 (210)
Q Consensus 101 ~~G~L~k~~~--~~~~wk~r~fvL~~~--~L~--yy~~~-----~-~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~ 168 (210)
++|||+.+.. ....|.+.||..+.. .+. .+... . .......|.|..|++...+..++++||+|..+..
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~r~~~~~dRRFCFei~~~~~ 80 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSRRKTESIDKRFCFDVEVEEK 80 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccccccCCccceeeEeeeecCC
Confidence 5799998863 333899999998653 322 12221 1 1122244777788888888889999999987753
Q ss_pred eeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 169 EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
..++.|+|+|+.++..||.||.
T Consensus 81 ------------------~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 81 ------------------PGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred ------------------CCeEEEEecCHHHHHHHHHhhc
Confidence 2479999999999999999985
No 56
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.15 E-value=2.4e-10 Score=76.81 Aligned_cols=95 Identities=25% Similarity=0.456 Sum_probs=68.4
Q ss_pred ceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCcee---EEEeCCeEEEEec------CCCCcceEEEEeCCceee
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRG---IIPLENIQVREVH------DRHKPHCFELFTSGFEFI 171 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~---~i~L~~~~v~~~~------~~~~~~~f~i~~~~~~~~ 171 (210)
.+|+|+.+..+.++||++||+|+...|+|.......++.. ...+++..|-... ....+++|.|.++..+.
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~- 80 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQS- 80 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCc-
Confidence 5899999988889999999999999999987665555443 2444554443322 12467899987764210
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
.+..-.-+|+||+++.+..|+.||+
T Consensus 81 ------------~~s~~ik~lCaeDe~t~~~W~ta~R 105 (114)
T cd01259 81 ------------KGSQSIKYLCAEDLPTLDRWLTAIR 105 (114)
T ss_pred ------------ccchhheeeccCCHHHHHHHHHHHH
Confidence 0112356899999999999999997
No 57
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.11 E-value=2.5e-10 Score=74.65 Aligned_cols=70 Identities=16% Similarity=0.287 Sum_probs=46.4
Q ss_pred eEEEeeCC-CCCCceeEEEEE--eCCEEEEEeecCCcc-cc--cccCCcceec-ccceeEEEe---------ch--hHHH
Q psy17820 11 GWLWKQGG-RYKSWKRRWFIL--NDKCLYYFEYTTDKS-AC--LIENSSGRYK-SWKRRWFIL---------ND--KCLY 72 (210)
Q Consensus 11 G~L~K~g~-~~~~wkrRwfvL--~~~~L~Yy~~~~~~~-~~--~i~~~~~~~~-~~~~~~~~~---------~~--~~~~ 72 (210)
|||.|+.. ..++|+|||||| +++.|+||.++++.. .+ .|..+.|..+ .++.+.|.+ .+ .-+.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~~~~~~I~idsg~~i~hLKa~s~~~f~~ 80 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISANKKSRRIDIDSGDEIWHLKAKSQEDFQR 80 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEecCCCCEEEEEcCCeEEEEEcCCHHHHHH
Confidence 89999866 689999999999 899999999887742 22 3444444322 223333322 22 2778
Q ss_pred HHHhhhcC
Q psy17820 73 YFEYTTDK 80 (210)
Q Consensus 73 ~~~~i~~~ 80 (210)
|..++..+
T Consensus 81 Wv~aL~~a 88 (89)
T PF15409_consen 81 WVSALQKA 88 (89)
T ss_pred HHHHHHhc
Confidence 88877654
No 58
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.10 E-value=2.5e-09 Score=71.86 Aligned_cols=91 Identities=20% Similarity=0.508 Sum_probs=68.3
Q ss_pred ceeeEEeecC-c---cCCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCC-eEEEEe--------cCCCCcceEEEE
Q psy17820 101 KEGWLWKQGG-R---YKSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLEN-IQVREV--------HDRHKPHCFELF 164 (210)
Q Consensus 101 ~~G~L~k~~~-~---~~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~-~~v~~~--------~~~~~~~~f~i~ 164 (210)
.+|||..... + .++|++.|+||.+..|++|..+++ ..|..+++|.. +.|..+ ...+-|..|+|.
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~ 81 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQIL 81 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEEE
Confidence 5899976543 2 359999999999999999998765 34777788864 333332 223567788887
Q ss_pred eCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 165 TSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
..+. .++++|-|+++.|.+.|+.||.+
T Consensus 82 ~~~~------------------~~~lllLA~s~~ek~kWV~~L~~ 108 (112)
T cd01242 82 YANE------------------ARDLLLLAPQTDEQNKWVSRLVK 108 (112)
T ss_pred eCCc------------------cceEEEEeCCchHHHHHHHHHHH
Confidence 6532 37899999999999999999964
No 59
>KOG1117|consensus
Probab=99.06 E-value=6.6e-10 Score=97.15 Aligned_cols=173 Identities=17% Similarity=0.249 Sum_probs=111.6
Q ss_pred CCCCCeeeEEEeeCC-CCCCceeEEEEEeCCEEEEEeecCCcc-cccccCCcc------eecc-----cceeEEE-echh
Q psy17820 4 FFNPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKS-ACLIENSSG------RYKS-----WKRRWFI-LNDK 69 (210)
Q Consensus 4 ~~~~~~~G~L~K~g~-~~~~wkrRwfvL~~~~L~Yy~~~~~~~-~~~i~~~~~------~~~~-----~~~~~~~-~~~~ 69 (210)
..++.++|||.|.+. +...++|||..+.+..|.||.+.++.- +++|....+ +|.. ..+.|+. .++.
T Consensus 84 isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~py~k~~i~va~is~v~~~gd~kfevitn~r~fvfr~e~~ 163 (1186)
T KOG1117|consen 84 ISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKDPYSKGPIPVAAISAVRNFGDNKFEVITNQRTFVFRQESE 163 (1186)
T ss_pred cCchhhcchhhccCcCcccccCccceecCCCCccccCCCCCCCCCCceeeehhhhhhhccCceEEEEecceEEEEecCCc
Confidence 467899999999987 678899999999999999999998864 234433332 1111 1112221 1221
Q ss_pred --HHHHHHhhhcC--CccccCCCCCCccccccCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCC---ceeEE
Q psy17820 70 --CLYYFEYTTDK--PFKIPEDDGNDLMHTFFNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKE---PRGII 142 (210)
Q Consensus 70 --~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~---~~~~i 142 (210)
-..|....... +..+.+ .......|.+.|||...|.+ .+-|.+|.++.+..|++.++-. ....|
T Consensus 164 ~~r~~w~s~l~s~~~~Q~l~~-----ap~pp~pP~raG~lelrg~k----ak~f~~vsp~~vqL~knlq~f~lgigit~I 234 (1186)
T KOG1117|consen 164 GERFIWVSPLQSALKEQRLRS-----APPPPVPPPRAGWLELRGFK----AKLFVAVSPERVQLYKNLQSFPLGIGITFI 234 (1186)
T ss_pred ccceeeechhhhcchhhhhcc-----CCCCCCCCCCccchhccccc----cceeEEecCceeeeecccccccCCceeEEE
Confidence 11222221111 000100 00111237899999988754 4588999999999999987643 23335
Q ss_pred EeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 143 PLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 143 ~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+++.++|..+.. -.|.+.++ .|.+-|.|+++.+++.|+.|++.
T Consensus 235 ~m~~~nvk~vdr----~sfdl~Tp--------------------~r~fsftaese~erq~w~ea~q~ 277 (1186)
T KOG1117|consen 235 YMEVSNVKEVDR----RSFDLNTP--------------------YREFSFTAESETERQIWGEAPQP 277 (1186)
T ss_pred eccccccccccc----ceeccCCc--------------------eeeeeeeeccchhhhhhhhccCc
Confidence 666666555433 36777766 47999999999999999999875
No 60
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.05 E-value=4e-09 Score=71.30 Aligned_cols=68 Identities=28% Similarity=0.513 Sum_probs=55.8
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCe-EEEEe-----cCCCCcceEEEEeCC
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENI-QVREV-----HDRHKPHCFELFTSG 167 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~-~v~~~-----~~~~~~~~f~i~~~~ 167 (210)
.++|||-.-...-+.|||+|++|....|.+|++++...+...|+|..+ .|... +....++||+|.+..
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~ 74 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTT 74 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecC
Confidence 379999887766689999999999999999999999999999999875 34322 123578999999864
No 61
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.03 E-value=6.7e-09 Score=70.88 Aligned_cols=97 Identities=25% Similarity=0.396 Sum_probs=68.6
Q ss_pred cceeeEEeec--CccCCeeEEEEEEeCCEEEEeccCCCC------CceeEEEeC--CeEEEEec--------CCCCcceE
Q psy17820 100 DKEGWLWKQG--GRYKSWKRRWFILNDKCLYYFEYTTDK------EPRGIIPLE--NIQVREVH--------DRHKPHCF 161 (210)
Q Consensus 100 ~~~G~L~k~~--~~~~~wk~r~fvL~~~~L~yy~~~~~~------~~~~~i~L~--~~~v~~~~--------~~~~~~~f 161 (210)
..+|||.... +..++|+++|+||.+..|++|..+++. .+...++|+ .++|..+. ..+-|..|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 3699997543 344699999999999999999976642 345667884 35555442 22567788
Q ss_pred EEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 162 ELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+|....- ....+..+.+|-|+|+.|++.|+.||..
T Consensus 83 ~I~~~~~-------------~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 83 RVTTSQI-------------SASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred EEEEecc-------------cCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 8875420 0112346889999999999999999863
No 62
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.03 E-value=1.2e-09 Score=73.77 Aligned_cols=37 Identities=43% Similarity=0.908 Sum_probs=34.4
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
+.++|||.|++...+.|++|||||+++.|.||+++.+
T Consensus 1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~ 37 (104)
T PF00169_consen 1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKD 37 (104)
T ss_dssp EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTT
T ss_pred CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCcc
Confidence 3689999999998999999999999999999999884
No 63
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.03 E-value=5.5e-09 Score=70.82 Aligned_cols=88 Identities=30% Similarity=0.374 Sum_probs=69.2
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccC---CCCCceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeee
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYT---TDKEPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~---~~~~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~ 175 (210)
+++|-|.|... +.-+.|+|.|=++.|.|-+.. ..-...+.++|.++.|..+.+. ..+++|.|.++.
T Consensus 5 i~eG~L~K~~r--k~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~~~~-------- 74 (104)
T cd01218 5 VGEGVLTKMCR--KKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDGIERNGWIIKTPT-------- 74 (104)
T ss_pred EecCcEEEeec--CCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEEEecCCcccccceEEEecCC--------
Confidence 57899998874 344778999999999885431 1123467899999998887664 457899988764
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+++.++|+|++|+.+|+.+|+.
T Consensus 75 ------------kSf~v~A~s~~eK~eWl~~i~~ 96 (104)
T cd01218 75 ------------KSFAVYAATETEKREWMLHINK 96 (104)
T ss_pred ------------eEEEEEcCCHHHHHHHHHHHHH
Confidence 7999999999999999999975
No 64
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.01 E-value=1.8e-09 Score=75.17 Aligned_cols=37 Identities=27% Similarity=0.696 Sum_probs=31.7
Q ss_pred CCeeeEEEe-e-CCCCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 7 PDKEGWLWK-Q-GGRYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 7 ~~~~G~L~K-~-g~~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
+...|||.- + .++.++|+||||||+++.|.||+.+.+
T Consensus 1 ~~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d 39 (122)
T cd01263 1 VEYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDD 39 (122)
T ss_pred CccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCc
Confidence 467899985 3 457899999999999999999997776
No 65
>KOG0690|consensus
Probab=98.98 E-value=7.8e-10 Score=88.20 Aligned_cols=98 Identities=29% Similarity=0.511 Sum_probs=66.6
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEe-CCEEEEeccCCCCCceeEEEeCCeEEEE----ecCCCCcceEEEEeCCceee
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILN-DKCLYYFEYTTDKEPRGIIPLENIQVRE----VHDRHKPHCFELFTSGFEFI 171 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~-~~~L~yy~~~~~~~~~~~i~L~~~~v~~----~~~~~~~~~f~i~~~~~~~~ 171 (210)
.++.++|||+|+|...+.|+.|||+|. ++.|.-|+...........+|.+..|.. ..+..+|+.|.|.+..---
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTT- 91 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTT- 91 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhccCCCCceEEEEeeeeee-
Confidence 456799999999999999999999994 6778877754332212224444433322 2244678899887653210
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
--+| .|.++|.+++++|+.||+.+
T Consensus 92 -------------VIER--TF~ves~~eRq~W~~AIq~v 115 (516)
T KOG0690|consen 92 -------------VIER--TFYVESAEERQEWIEAIQAV 115 (516)
T ss_pred -------------eeee--eeecCCHHHHHHHHHHHHHH
Confidence 0123 46789999999999999864
No 66
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.97 E-value=1.3e-08 Score=69.78 Aligned_cols=93 Identities=20% Similarity=0.232 Sum_probs=73.3
Q ss_pred CCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC-----------CCceeEEEeCCeEEEEecCCC-CcceEEEEe
Q psy17820 98 NPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD-----------KEPRGIIPLENIQVREVHDRH-KPHCFELFT 165 (210)
Q Consensus 98 ~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~-----------~~~~~~i~L~~~~v~~~~~~~-~~~~f~i~~ 165 (210)
+.+++|-|.|.....+..+.|+|.|=++.|.|.+.... -..++.++|+.+.|...++.. -++.|.|.+
T Consensus 3 elI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~~ 82 (112)
T cd01261 3 EFIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEIIL 82 (112)
T ss_pred cccccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEEc
Confidence 34689999998866677899999999999998875332 123456888888888776653 589999987
Q ss_pred CCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 166 SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.++ +.+.|+|.|++|..+||.+|..
T Consensus 83 ~~~-------------------~s~~l~Akt~eeK~~Wm~~l~~ 107 (112)
T cd01261 83 KDG-------------------NSVIFSAKNAEEKNNWMAALIS 107 (112)
T ss_pred CCC-------------------CEEEEEECCHHHHHHHHHHHHH
Confidence 532 6899999999999999999864
No 67
>KOG1090|consensus
Probab=98.95 E-value=2.5e-10 Score=101.07 Aligned_cols=93 Identities=30% Similarity=0.671 Sum_probs=74.5
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEe--CCEEEEeccCCCCCceeEEEeCCeEEEE-ecC--CCCcceEEEEeCCceee
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILN--DKCLYYFEYTTDKEPRGIIPLENIQVRE-VHD--RHKPHCFELFTSGFEFI 171 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~--~~~L~yy~~~~~~~~~~~i~L~~~~v~~-~~~--~~~~~~f~i~~~~~~~~ 171 (210)
.+-+.+|+|+|+|..+|.||.|||||. ...|+||.+..+..|+|+|+|....... +.+ .+.+--|.+.+.
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaevesv~~~~~k~vdekgffdlktt----- 1706 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTT----- 1706 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeecccccccccchhhhhhhhhhcccCccccCccceeeeehh-----
Confidence 445679999999999999999999995 4689999999999999999998753322 222 133444666554
Q ss_pred eeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.|.|.|+|.+-...++|++.|++
T Consensus 1707 ---------------~rvynf~a~nin~AqqWve~iqs 1729 (1732)
T KOG1090|consen 1707 ---------------NRVYNFCAQNINLAQQWVECIQS 1729 (1732)
T ss_pred ---------------hHHHHHHhccchHHHHHHHHHHH
Confidence 47999999999999999999986
No 68
>KOG3640|consensus
Probab=98.92 E-value=1.4e-09 Score=95.96 Aligned_cols=106 Identities=24% Similarity=0.444 Sum_probs=75.8
Q ss_pred CCcceeeEEee--cCccCCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEecC-----CCCcceEEEEeCC
Q psy17820 98 NPDKEGWLWKQ--GGRYKSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVHD-----RHKPHCFELFTSG 167 (210)
Q Consensus 98 ~~~~~G~L~k~--~~~~~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~~-----~~~~~~f~i~~~~ 167 (210)
++...|||+.- +.+++.|.||||+|.++.+.|++.+.+ +.|.+.|+|..|+-..+++ .++++.|.|..-.
T Consensus 989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~r 1068 (1116)
T KOG3640|consen 989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWR 1068 (1116)
T ss_pred ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEeec
Confidence 45568998875 356778999999999999999997765 5699999999987655443 2688999987321
Q ss_pred ceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
... .+.+-.++. ..-...|+||+.++++.|+.+|++
T Consensus 1069 Pl~-----~Dqep~~ie-~r~Rv~LaADTkeel~~Wls~iN~ 1104 (1116)
T KOG3640|consen 1069 PLE-----DDQEPLLIE-KRLRVMLAADTKEELQSWLSAIND 1104 (1116)
T ss_pred ccc-----cccCcchhh-hcceeeeecccHHHHHHHHHHHHH
Confidence 100 011111111 112678999999999999999975
No 69
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.89 E-value=6.6e-09 Score=72.81 Aligned_cols=37 Identities=32% Similarity=0.818 Sum_probs=31.8
Q ss_pred eeeEEEeeCCCC------C------------CceeEEEEEeCCEEEEEeecCCcc
Q psy17820 9 KEGWLWKQGGRY------K------------SWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 9 ~~G~L~K~g~~~------~------------~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
|+||+.|++++. . +|++|||||+++.|.||+++.+..
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~~ 55 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSAQ 55 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCCc
Confidence 689999998841 2 699999999999999999998843
No 70
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.81 E-value=1.4e-08 Score=66.46 Aligned_cols=40 Identities=23% Similarity=0.458 Sum_probs=33.6
Q ss_pred CCeeeEEEeeCCC--CCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 7 PDKEGWLWKQGGR--YKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 7 ~~~~G~L~K~g~~--~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
+++.|||.-...+ .++=|+|||||++++|+||++..|+++
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~ 42 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEK 42 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccccc
Confidence 4678999887663 345799999999999999999999876
No 71
>KOG2059|consensus
Probab=98.68 E-value=2.8e-08 Score=85.67 Aligned_cols=90 Identities=26% Similarity=0.455 Sum_probs=71.9
Q ss_pred CcceeeEEeecC-----ccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEE-EecCC--CCcceEEEEeCCcee
Q psy17820 99 PDKEGWLWKQGG-----RYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVR-EVHDR--HKPHCFELFTSGFEF 170 (210)
Q Consensus 99 ~~~~G~L~k~~~-----~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~-~~~~~--~~~~~f~i~~~~~~~ 170 (210)
+.+.|.|.++.. +.+.+|+|||.|.+..|.|-|++. ..|.+.|+|.++..+ .+++. +.+++|+|+.++
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~-~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~d--- 640 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG-KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD--- 640 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCc-cCcccceeHHHHHHHHHhhhhccCCCceEEEEecC---
Confidence 345666776542 235899999999999999999884 578999999987543 34443 788999998874
Q ss_pred eeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 171 IKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|+.|++|.+-.|..+|+++|.+
T Consensus 641 -----------------rtly~Q~~n~vEandWldaL~k 662 (800)
T KOG2059|consen 641 -----------------RTLYVQAKNCVEANDWLDALRK 662 (800)
T ss_pred -----------------cceeEecCCchHHHHHHHHHHH
Confidence 6999999999999999999975
No 72
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.62 E-value=2e-07 Score=63.50 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=27.9
Q ss_pred eeeEEEee-C----C---CCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 9 KEGWLWKQ-G----G---RYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 9 ~~G~L~K~-g----~---~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
++|+|..+ . + ..+.|++|||||+++.|+||++++.
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~ 43 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKM 43 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcc
Confidence 37888832 2 1 4679999999999999999998754
No 73
>KOG3751|consensus
Probab=98.61 E-value=1.4e-07 Score=79.03 Aligned_cols=97 Identities=24% Similarity=0.426 Sum_probs=69.4
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEE---EeCCeEEEEec--C----CCCcceEEEEeCC
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGII---PLENIQVREVH--D----RHKPHCFELFTSG 167 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i---~L~~~~v~~~~--~----~~~~~~f~i~~~~ 167 (210)
..|.++|+|+.+..+.|+|||.||+|+...|||+......+|+..- ++.+..|-... . ....++|.|....
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~ 394 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNK 394 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeecc
Confidence 4578899999999889999999999999999999877666665443 33333333221 1 1346788876654
Q ss_pred ceeeeeeecCCCCceeeecceE-EEEEcCCHHHHHHHHHHHh
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~-~~l~a~s~~e~~~Wi~al~ 208 (210)
.+ ...|. -+|+||++..+..|+.||+
T Consensus 395 ~~---------------~~~r~lk~lCAEDe~t~~~WltAiR 421 (622)
T KOG3751|consen 395 LR---------------NKRRFLKMLCAEDEQTRTCWLTAIR 421 (622)
T ss_pred cc---------------CcccceeeeecccchhHHHHHHHHH
Confidence 21 01133 3799999999999999997
No 74
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.59 E-value=1.4e-07 Score=63.46 Aligned_cols=26 Identities=27% Similarity=0.719 Sum_probs=23.1
Q ss_pred CCCCceeEEEEEeCCEEEEEeecCCc
Q psy17820 19 RYKSWKRRWFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 19 ~~~~wkrRwfvL~~~~L~Yy~~~~~~ 44 (210)
..++||||||+|+|+.|+||+++.+.
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~ 41 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDS 41 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhc
Confidence 46789999999999999999988763
No 75
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.57 E-value=3.4e-07 Score=62.08 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=32.2
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeec
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYT 41 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~ 41 (210)
-+++|||.|.++..+.|+.|||.|.++.|.|++..
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~ 36 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPR 36 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcc
Confidence 47899999999999999999999999999999954
No 76
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.55 E-value=1e-06 Score=59.65 Aligned_cols=85 Identities=22% Similarity=0.380 Sum_probs=60.1
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEeCC-EEEEeccCCCCCceeEEEeCC-eEEEEecCCCCcceEEEEeCCceeeeee
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILNDK-CLYYFEYTTDKEPRGIIPLEN-IQVREVHDRHKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~~~-~L~yy~~~~~~~~~~~i~L~~-~~v~~~~~~~~~~~f~i~~~~~~~~~~~ 174 (210)
...+++|.+.|+.+.. .++|+++|+++ .|+|+.... ...+|.|++.. .++... ....|.|.+++
T Consensus 11 e~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~-~~~KGeI~~~~~l~v~~k----~~~~F~I~tp~------- 76 (104)
T PF14593_consen 11 ELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK-MVLKGEIPWSKELSVEVK----SFKTFFIHTPK------- 76 (104)
T ss_dssp --EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT-TEEEEEE--STT-EEEEC----SSSEEEEEETT-------
T ss_pred CeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC-CeECcEEecCCceEEEEc----cCCEEEEECCC-------
Confidence 3457899999998765 79999999988 887777664 46789999985 344442 22378888774
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|+|+|.. .+.+...|+++|+.
T Consensus 77 -------------RtY~l~d-~~~~A~~W~~~I~~ 97 (104)
T PF14593_consen 77 -------------RTYYLED-PEGNAQQWVEAIEE 97 (104)
T ss_dssp -------------EEEEEE--TTS-HHHHHHHHHH
T ss_pred -------------cEEEEEC-CCCCHHHHHHHHHH
Confidence 8999875 56668889999974
No 77
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.51 E-value=7.5e-08 Score=63.68 Aligned_cols=27 Identities=33% Similarity=0.773 Sum_probs=24.2
Q ss_pred CCeeeEEEeeCC-CCCCceeEEEEEeCC
Q psy17820 7 PDKEGWLWKQGG-RYKSWKRRWFILNDK 33 (210)
Q Consensus 7 ~~~~G~L~K~g~-~~~~wkrRwfvL~~~ 33 (210)
..++|||+|+|+ ..+.||||||||.+-
T Consensus 2 mk~sGyL~k~Gg~~~KkWKKRwFvL~qv 29 (117)
T cd01234 2 MKHCGYLYAIGKNVWKKWKKRFFVLVQV 29 (117)
T ss_pred CceeEEEEeccchhhhhhheeEEEEEch
Confidence 458999999999 899999999999853
No 78
>KOG0521|consensus
Probab=98.49 E-value=8.4e-08 Score=86.02 Aligned_cols=91 Identities=30% Similarity=0.551 Sum_probs=75.7
Q ss_pred CcceeeEEeecC-ccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeeec
Q psy17820 99 PDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 99 ~~~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~~ 176 (210)
....|+|+++.. ..+.|+||||..+++.+.|...-.+.......+|..|+|..+++. .+.+||+|+++.
T Consensus 274 ~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~drr~CF~iiS~t--------- 344 (785)
T KOG0521|consen 274 YRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDLRTCSVKPDAEQRDRRFCFEIISPT--------- 344 (785)
T ss_pred hhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccchhccccCCcccccceeeEEEecCC---------
Confidence 345788887764 477999999999999998887765544466788889999887765 789999999864
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
++|.|+|+|+.+.++||.+|+.
T Consensus 345 -----------ks~~lQAes~~d~~~Wi~~i~n 366 (785)
T KOG0521|consen 345 -----------KSYLLQAESEKDCQDWISALQN 366 (785)
T ss_pred -----------cceEEecCchhHHHHHHHHHHH
Confidence 6999999999999999999974
No 79
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=98.49 E-value=1.2e-06 Score=58.03 Aligned_cols=37 Identities=43% Similarity=0.949 Sum_probs=33.4
Q ss_pred CCeeeEEEeeCC-CCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 7 PDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 7 ~~~~G~L~K~g~-~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
+.++|||.+++. ....|++|||+|.++.|.||++..+
T Consensus 1 ~~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~ 38 (102)
T smart00233 1 VIKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKA 38 (102)
T ss_pred CceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCc
Confidence 368999999998 7889999999999999999998765
No 80
>KOG0932|consensus
Probab=98.47 E-value=1.4e-08 Score=85.58 Aligned_cols=166 Identities=19% Similarity=0.287 Sum_probs=103.5
Q ss_pred CCceeEEEEEeCCEEEEEeecCCcc---ccc-------ccCCcceecccceeEEEechh-----------HHHHHHhhhc
Q psy17820 21 KSWKRRWFILNDKCLYYFEYTTDKS---ACL-------IENSSGRYKSWKRRWFILNDK-----------CLYYFEYTTD 79 (210)
Q Consensus 21 ~~wkrRwfvL~~~~L~Yy~~~~~~~---~~~-------i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~ 79 (210)
..|-+|||-..-+.+ +..|.. +|- ++..+|...++-+.||....+ +.++|.+|+.
T Consensus 379 ~hFS~Ry~~CNP~~~----~S~DgvHtLTCAlmLLNTDLHGhniGKkMtcqdFI~Nl~glndG~dF~kelLKaLy~SIKn 454 (774)
T KOG0932|consen 379 RHFSRRYFQCNPDIF----DSEDGVHTLTCALMLLNTDLHGHNIGKKMTCQDFITNLAGLNDGGDFPKELLKALYNSIKN 454 (774)
T ss_pred HHHHHHhhccCcccc----ccccchhHHHHHHHHHccccccccccccccHHHHHHHHhcccccCccHHHHHHHHHHHHhh
Confidence 456778777765554 222222 221 577888889998888866442 8899999977
Q ss_pred CCcccc----------------CC------------CCCCcccccc----CCcceeeEEeec----------CccCCeeE
Q psy17820 80 KPFKIP----------------ED------------DGNDLMHTFF----NPDKEGWLWKQG----------GRYKSWKR 117 (210)
Q Consensus 80 ~~~~~~----------------~~------------~~~~~~~~~~----~~~~~G~L~k~~----------~~~~~wk~ 117 (210)
..+... .. ....+..+.. ..-+.|+|..+- .+..+||.
T Consensus 455 eklewAideee~~ks~se~a~~~~~~~~~~~s~~g~~~~pfldv~~dpsa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~ 534 (774)
T KOG0932|consen 455 EKLEWAIDEEELAKSLSELADPSVNGHPKSTSRIGSGSNPFLDVPPDPSAATYKSGFLARKYHADMDGKKTPRGKRGWKM 534 (774)
T ss_pred hhhhhccChhhhccChHhhcCCcccCCccccccccCCCCccccCCCCCCchhhhhhhhhhhhhccccCCcCCccchhHHH
Confidence 644320 00 0001111111 123689987651 13458999
Q ss_pred EEEEEeCCEEEEeccCCC-CCceeEEEeCCe------EEEEe-cCCCCcceEEEEeCCceeeeeeecCCCCceeeecceE
Q psy17820 118 RWFILNDKCLYYFEYTTD-KEPRGIIPLENI------QVREV-HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTV 189 (210)
Q Consensus 118 r~fvL~~~~L~yy~~~~~-~~~~~~i~L~~~------~v~~~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~ 189 (210)
-|.+|+|-.||+-+++-. ...+..-+|.+. -.... +-.+++++|.|.+.+. |.
T Consensus 535 fya~LkG~vLYlqkDey~p~kalse~~lknavsvHHALAt~AtdY~KKp~Vf~lrtAdw-------------------rv 595 (774)
T KOG0932|consen 535 FYAVLKGMVLYLQKDEYKPGKALSESDLKNAVSVHHALATPATDYSKKPHVFKLRTADW-------------------RV 595 (774)
T ss_pred HHHHHhhheEEeeccccCcccchhhhhhhhhhhhhhhhcCCCcccccCCceEEEEeccc-------------------ee
Confidence 999999999988775432 112222233331 11122 2247899999988864 89
Q ss_pred EEEEcCCHHHHHHHHHHHhc
Q psy17820 190 YRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 190 ~~l~a~s~~e~~~Wi~al~~ 209 (210)
|.|+|.|.+||+.||..|+-
T Consensus 596 ~LFQaps~eEmqsWi~rIN~ 615 (774)
T KOG0932|consen 596 FLFQAPSQEEMQSWIERINL 615 (774)
T ss_pred EEEeCCCHHHHHHHHHHHHH
Confidence 99999999999999998864
No 81
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.44 E-value=1.1e-05 Score=54.81 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=69.6
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC----CCceeEEEeCCeEEEEecCCC-------CcceEEEEeCCc
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD----KEPRGIIPLENIQVREVHDRH-------KPHCFELFTSGF 168 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~----~~~~~~i~L~~~~v~~~~~~~-------~~~~f~i~~~~~ 168 (210)
+++|-|.+.+...+.-+.|.+.|=++.|.|.|...- -.-++.|+|..+.|..+++.. -.+.|.|+..+.
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~ 82 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSEST 82 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCC
Confidence 568888877642223368899999999999885322 346788999999998876651 267888887753
Q ss_pred eeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 169 EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
+..|.|+|.|+++...|++||.
T Consensus 83 ------------------~~~~~f~~Kt~e~K~~Wm~a~~ 104 (109)
T cd01224 83 ------------------DEWYLFSFKSAERKHRWLSAFA 104 (109)
T ss_pred ------------------CeEEEEEECCHHHHHHHHHHHH
Confidence 3589999999999999999985
No 82
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.37 E-value=1.3e-06 Score=58.92 Aligned_cols=37 Identities=38% Similarity=0.700 Sum_probs=33.6
Q ss_pred eeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 9 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 9 ~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
.+|+|+-+..+.++||||||+|+...|+|+...+-++
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~ 38 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKN 38 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCC
Confidence 5899999999999999999999999999998776665
No 83
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.36 E-value=1.8e-06 Score=74.47 Aligned_cols=94 Identities=22% Similarity=0.361 Sum_probs=62.8
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCC-C--CCceeEEEeCCe-EEEEe---cCCCCcceEEEEeCCce
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTT-D--KEPRGIIPLENI-QVREV---HDRHKPHCFELFTSGFE 169 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~-~--~~~~~~i~L~~~-~v~~~---~~~~~~~~f~i~~~~~~ 169 (210)
.+....||+.+.+... .|++|||.+.++.+......+ + ......+.+... .+.++ ....++++|.|.+..+
T Consensus 375 sDv~~~G~l~k~~~~~-~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~- 452 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDM-RWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNG- 452 (478)
T ss_pred CCcccceEEeccCCCc-chhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecCC-
Confidence 4567899999988655 499999999887777543211 1 121222333221 22223 2345689999866543
Q ss_pred eeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 170 FIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
+.++|.|+|++++++|+.+|+.+
T Consensus 453 ------------------~~~~~~~~~~~~~~~W~~~~~~~ 475 (478)
T PTZ00267 453 ------------------QKIIAYAKTAEDRDQWISKFQRA 475 (478)
T ss_pred ------------------cEEEEecCChHHHHHHHHHHHHH
Confidence 57888999999999999999864
No 84
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.31 E-value=5.4e-06 Score=56.27 Aligned_cols=90 Identities=18% Similarity=0.373 Sum_probs=63.4
Q ss_pred eeeEEeecC----ccCCeeEEEEEEeCCEEEEeccCCC-----CCceeEEEeC--CeEEEE---ec--CCCCcceEEEEe
Q psy17820 102 EGWLWKQGG----RYKSWKRRWFILNDKCLYYFEYTTD-----KEPRGIIPLE--NIQVRE---VH--DRHKPHCFELFT 165 (210)
Q Consensus 102 ~G~L~k~~~----~~~~wk~r~fvL~~~~L~yy~~~~~-----~~~~~~i~L~--~~~v~~---~~--~~~~~~~f~i~~ 165 (210)
-|||..+-. ..+.|+.+|++|++..|+.|+...- ..|....+|- -+.+.. .. ..++++||.+.+
T Consensus 2 mGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irt 81 (108)
T cd01258 2 IGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRT 81 (108)
T ss_pred ceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEc
Confidence 488877632 3469999999999999999997643 3344444443 122211 11 125678999876
Q ss_pred CCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 166 SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
... | .+++|+.|+..|+..|..||++
T Consensus 82 g~~--v----------------esh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 82 GTQ--V----------------ENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CCc--e----------------eeEEEEecCHHHHHHHHHHHhc
Confidence 642 1 5899999999999999999975
No 85
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.29 E-value=6.3e-07 Score=59.88 Aligned_cols=92 Identities=20% Similarity=0.316 Sum_probs=66.6
Q ss_pred CCcceeeEEeecC-ccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEec--CCCCcceEEEEeCCceeeeee
Q psy17820 98 NPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVH--DRHKPHCFELFTSGFEFIKAC 174 (210)
Q Consensus 98 ~~~~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~--~~~~~~~f~i~~~~~~~~~~~ 174 (210)
+.+..||+.|.|+ ....|++|||-|-.+.|-++....+ .....|.+..+.-+..+ ..+..+|..|...++
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~-~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~------ 74 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEA-NKPELITMDQIEDVSVEFQQIKEENCILLKIRDE------ 74 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccc-cCCcEEEeehhhhcchhheeeccCceEEEEEcCC------
Confidence 4567999999986 4569999999999999998654433 33445555543221211 125678888887654
Q ss_pred ecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 175 KTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 175 ~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.++|.++++-+..+|...|+.
T Consensus 75 -------------~k~vlt~~d~i~l~qW~~elr~ 96 (116)
T cd01240 75 -------------KKIVLTNSDEIELKQWKKELRD 96 (116)
T ss_pred -------------ceEEEecCCcHHHHHHHHHHHH
Confidence 6899999999999999988864
No 86
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.24 E-value=5.7e-06 Score=57.39 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=28.9
Q ss_pred eeeEEEeeC-----C-----CCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 9 KEGWLWKQG-----G-----RYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 9 ~~G~L~K~g-----~-----~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
|+|+|..+- + +.+.|+++||||+++.|+.|+++..
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~ 46 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHK 46 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcc
Confidence 688988752 1 2579999999999999999999864
No 87
>KOG1090|consensus
Probab=98.20 E-value=1.2e-06 Score=78.52 Aligned_cols=50 Identities=34% Similarity=0.656 Sum_probs=41.7
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEe--CCEEEEEeecCCcc-cccccCCcc
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILN--DKCLYYFEYTTDKS-ACLIENSSG 54 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~--~~~L~Yy~~~~~~~-~~~i~~~~~ 54 (210)
.|...+|||+|+|...|.|+.|||||. ..+|+||++..|.. .+.|+.+++
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaev 1684 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEV 1684 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeecccccccccchhhhhhh
Confidence 466779999999999999999999996 56999999877665 467776665
No 88
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.19 E-value=3.9e-05 Score=51.33 Aligned_cols=89 Identities=25% Similarity=0.341 Sum_probs=63.0
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC-CCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecC
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD-KEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTD 177 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~-~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 177 (210)
-+++|.|...+.+ +.|+..|=+..|.+.+...+ -.-+..|.+.+..+.+..+ +.+++|.|.+.+.
T Consensus 4 Llleg~l~~~~~~----~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~~-~d~~~F~v~~~~~--------- 69 (97)
T cd01222 4 LLLEGRFREHGGG----KPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKNLMLVEHLP-GEPLCFRVIPFDD--------- 69 (97)
T ss_pred eeeeceEEeecCC----CceEEEEecccEEEEEecCCeeEEEEEEEecceEEecCCC-CCCcEEEEEecCC---------
Confidence 4567777644432 45888887777777665433 3345667888777766444 3489999976642
Q ss_pred CCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 178 SEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 178 ~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.+.+.|+|.|.++.+.|+.+|+.
T Consensus 70 --------p~~~~~l~A~s~e~K~~W~~~i~~ 93 (97)
T cd01222 70 --------PKGALQLTARNREEKRIWTQQLKR 93 (97)
T ss_pred --------CceEEEEEecCHHHHHHHHHHHHH
Confidence 236899999999999999999975
No 89
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=98.18 E-value=8.9e-06 Score=71.44 Aligned_cols=95 Identities=18% Similarity=0.309 Sum_probs=67.2
Q ss_pred CCcceeeEEeecC---ccCCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCC-eEEEEecCC----CCcceEEEEeCC
Q psy17820 98 NPDKEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLEN-IQVREVHDR----HKPHCFELFTSG 167 (210)
Q Consensus 98 ~~~~~G~L~k~~~---~~~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~-~~v~~~~~~----~~~~~f~i~~~~ 167 (210)
.+.++|||+..|. +..-..+|||||.+..|.|||.... ..|.....+.+ +.|+..... .--+.|.|+...
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~ 82 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 82 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEecCC
Confidence 3468999999874 2346799999999999999997543 34555555554 455543221 223566666553
Q ss_pred ceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
. ..+...|.|.+.+|...|+.||+.
T Consensus 83 ~-----------------~~~~~~~~a~~~eea~~W~~a~~~ 107 (719)
T PLN00188 83 E-----------------KYHRITMAAFNIQEALIWKEKIES 107 (719)
T ss_pred C-----------------ccccEEEecCCHHHHHHHHHHHHH
Confidence 2 347899999999999999999975
No 90
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.11 E-value=2.5e-05 Score=51.38 Aligned_cols=39 Identities=44% Similarity=0.779 Sum_probs=33.7
Q ss_pred eeeEEEeeCCCC----CCceeEEEEEeCCEEEEEeecCCcccc
Q psy17820 9 KEGWLWKQGGRY----KSWKRRWFILNDKCLYYFEYTTDKSAC 47 (210)
Q Consensus 9 ~~G~L~K~g~~~----~~wkrRwfvL~~~~L~Yy~~~~~~~~~ 47 (210)
.+|||.+++... ..|++|||+|.++.|.||+.+.+....
T Consensus 1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~ 43 (99)
T cd00900 1 KEGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIK 43 (99)
T ss_pred CccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCC
Confidence 479999999864 799999999999999999988776543
No 91
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.08 E-value=1.4e-05 Score=52.20 Aligned_cols=35 Identities=46% Similarity=1.033 Sum_probs=31.3
Q ss_pred eeeEEEeeCCCC-CCceeEEEEEeCCEEEEEeecCC
Q psy17820 9 KEGWLWKQGGRY-KSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 9 ~~G~L~K~g~~~-~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
++|||.+++... ..|++|||+|.++.|.+|+...+
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~ 36 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSS 36 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCC
Confidence 479999998765 89999999999999999998765
No 92
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.03 E-value=0.00014 Score=49.27 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=60.1
Q ss_pred CeeEEEEEEeCCEEEEeccCC---CCCceeEEEeCCeEEEEecC-CCCcceEEEEeCCceeeeeeecCCCCceeeecceE
Q psy17820 114 SWKRRWFILNDKCLYYFEYTT---DKEPRGIIPLENIQVREVHD-RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTV 189 (210)
Q Consensus 114 ~wk~r~fvL~~~~L~yy~~~~---~~~~~~~i~L~~~~v~~~~~-~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~ 189 (210)
.-..||++|-...|.+.+... .-.-.|.++|.+.+|...++ .+.++.|+|.-+.- ..
T Consensus 27 e~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e~~~~aFeI~G~li-------------------~~ 87 (111)
T cd01225 27 EKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTEALKNAFEISGPLI-------------------ER 87 (111)
T ss_pred ccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEEechHhccCccceEEEeccCc-------------------Cc
Confidence 447899999999998877533 23457889999999887554 36689999975532 36
Q ss_pred EEEEcCCHHHHHHHHHHHhc
Q psy17820 190 YRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 190 ~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.+.|.+++|+.+|+..|++
T Consensus 88 i~v~C~~~~e~~~Wl~hL~~ 107 (111)
T cd01225 88 IVVVCNNPQDAQEWVELLNA 107 (111)
T ss_pred EEEEeCCHHHHHHHHHHHHh
Confidence 77889999999999999975
No 93
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.97 E-value=5.5e-05 Score=50.95 Aligned_cols=36 Identities=28% Similarity=0.367 Sum_probs=22.6
Q ss_pred CeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCc
Q psy17820 8 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 8 ~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~ 44 (210)
+++|+|.|.++ .+.|+|+||.++|-.|++.....++
T Consensus 3 ikEG~L~K~~~-k~~~~R~~FLFnD~LlY~~~~~~~~ 38 (99)
T cd01220 3 IRQGCLLKLSK-KGLQQRMFFLFSDLLLYTSKSPTDQ 38 (99)
T ss_pred eeEEEEEEEeC-CCCceEEEEEccceEEEEEeecCCC
Confidence 68999999987 3466655555555444444444433
No 94
>KOG3531|consensus
Probab=97.96 E-value=2.2e-06 Score=75.46 Aligned_cols=90 Identities=21% Similarity=0.488 Sum_probs=74.0
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecC---CCCcceEEEEeCCceeeeeeec
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHD---RHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~---~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
..+|+|..+-....+|+|-|.|..+-+|++||+-+|..|..+++|-|+++....+ ..+.+.|.|....
T Consensus 925 qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~--------- 995 (1036)
T KOG3531|consen 925 QLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKS--------- 995 (1036)
T ss_pred hhhHHHHHHhhccccceeeeeeecceeeEeecccccccccccccccccccCCCCCCCCcchhheeeeehhh---------
Confidence 3468887665555699999999999999999999999999999999988765332 2456777776553
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
-.|+|+|++.-..+.|++.|+.
T Consensus 996 -----------hvyffraes~yt~~rw~evi~~ 1017 (1036)
T KOG3531|consen 996 -----------HVYFFRAESYYTFERWMEVITD 1017 (1036)
T ss_pred -----------hHHHHhhhhhhhhhhHHHHhhc
Confidence 3899999999999999999985
No 95
>KOG1451|consensus
Probab=97.93 E-value=4.4e-05 Score=65.27 Aligned_cols=124 Identities=15% Similarity=0.244 Sum_probs=83.2
Q ss_pred ccceeEEEechhHHHHHHhhhcCCccccCCCCCCccccccCCcceeeEEeec--CccCCeeEEEEEEeCC--EEEEec--
Q psy17820 58 SWKRRWFILNDKCLYYFEYTTDKPFKIPEDDGNDLMHTFFNPDKEGWLWKQG--GRYKSWKRRWFILNDK--CLYYFE-- 131 (210)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~~--~~~~~wk~r~fvL~~~--~L~yy~-- 131 (210)
.+++-|-..+.+++.+...+..++..-. ....++++|||+.+. ...++|-+.||+.... .+..-.
T Consensus 233 nTrn~f~~Tr~E~EeLkKkmke~p~e~k---------~p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~ 303 (812)
T KOG1451|consen 233 NTRNNFNATRAEAEELKKKMKESPTEDK---------RPTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPAN 303 (812)
T ss_pred HhhhcccchHHHHHHHHHHHhhCccccc---------CCCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecc
Confidence 3555666666667777777766654221 113467999999875 3456999999999644 222211
Q ss_pred cCC--CCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 132 YTT--DKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 132 ~~~--~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
... +..+...+.|..|+-...+.-++.+||.|-.... .-++.++|-|++++..||+|+-
T Consensus 304 qk~g~k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~er------------------pgviTmQALSE~drrlWmeAMD 364 (812)
T KOG1451|consen 304 QKTGTKMGQTATFKLKSCSRRKTDSIDKRFCFDVEVEER------------------PGVITMQALSEKDRRLWMEAMD 364 (812)
T ss_pred cCCCCcCCCcceEEehhhccCcccccccceeeeeeeccc------------------CCeeehHhhhhhHHHHHHHHhc
Confidence 111 1224455777777766666667889999876542 2488999999999999999973
No 96
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.93 E-value=0.00023 Score=49.64 Aligned_cols=81 Identities=15% Similarity=0.263 Sum_probs=50.4
Q ss_pred CeeEEEEEEeCCEEEEeccCCCCC--ceeEEEeCCeEEEEecCC-----------CCcceEEEEeCCceeeeeeecCCCC
Q psy17820 114 SWKRRWFILNDKCLYYFEYTTDKE--PRGIIPLENIQVREVHDR-----------HKPHCFELFTSGFEFIKACKTDSEG 180 (210)
Q Consensus 114 ~wk~r~fvL~~~~L~yy~~~~~~~--~~~~i~L~~~~v~~~~~~-----------~~~~~f~i~~~~~~~~~~~~~~~~~ 180 (210)
+-+.+|+.|=++.|.|-+...+.. .....+...+.|..++.. ..++.|.|.....
T Consensus 26 ~~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N------------ 93 (125)
T cd01221 26 KARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRN------------ 93 (125)
T ss_pred cCCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeecc------------
Confidence 446789999999888876543211 111122334444443321 3467777753321
Q ss_pred ceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 181 KVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 181 ~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
-.+..+.+.|+|+|+.|+..||.||.
T Consensus 94 --~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 94 --ADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred --CCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 01234789999999999999999984
No 97
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=97.88 E-value=8.5e-05 Score=50.29 Aligned_cols=45 Identities=27% Similarity=0.257 Sum_probs=35.0
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEeCC-EEEEEeecCCcccccccC
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILNDK-CLYYFEYTTDKSACLIEN 51 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~~~-~L~Yy~~~~~~~~~~i~~ 51 (210)
+.+.++|+|.|+.|.. .|+|+|+|+++ .|.|++..+....+.|..
T Consensus 11 e~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~~~KGeI~~ 56 (104)
T PF14593_consen 11 ELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKMVLKGEIPW 56 (104)
T ss_dssp --EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTTEEEEEE--
T ss_pred CeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCCeECcEEec
Confidence 3478999999999866 79999999988 999999887765555543
No 98
>KOG0690|consensus
Probab=97.84 E-value=1.1e-05 Score=64.98 Aligned_cols=50 Identities=30% Similarity=0.517 Sum_probs=36.8
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEe-CCEEEEEee-cCCccc--ccccCCcc
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILN-DKCLYYFEY-TTDKSA--CLIENSSG 54 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~-~~~L~Yy~~-~~~~~~--~~i~~~~~ 54 (210)
..++++|||.|+|.-.++|+-|||+|. ||.|.=|++ +++..+ ..+.+-.|
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v 66 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMV 66 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhh
Confidence 357899999999999999999999994 777777764 444432 34444444
No 99
>PLN02866 phospholipase D
Probab=97.84 E-value=0.00019 Score=65.81 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=67.8
Q ss_pred ccccCCcceeeEEeec-----C------c---------cCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEec
Q psy17820 94 HTFFNPDKEGWLWKQG-----G------R---------YKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVH 153 (210)
Q Consensus 94 ~~~~~~~~~G~L~k~~-----~------~---------~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~ 153 (210)
+....-.++|++.|+. + . ...|.+||++|+++.|.|.+++.+..++.++.+.-.-
T Consensus 177 ~~~g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~----- 251 (1068)
T PLN02866 177 PEYGPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLP----- 251 (1068)
T ss_pred hhcCCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEeccc-----
Confidence 3344556899999881 1 0 2369999999999999999888887777776554210
Q ss_pred CCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 154 DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 154 ~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.....-.+++..... ++.-..-.++..+...+|++.|.|.|...+..|+.+|+.
T Consensus 252 ~~~~~~~~~~~~~~~--~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~ 305 (1068)
T PLN02866 252 ASNGNGEGQISLAKE--IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAIND 305 (1068)
T ss_pred ccccCCCcceeeccc--ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHH
Confidence 000000111110000 011111223444455568999999999999999999974
No 100
>KOG1117|consensus
Probab=97.84 E-value=5e-05 Score=67.50 Aligned_cols=90 Identities=27% Similarity=0.523 Sum_probs=71.0
Q ss_pred eeeEEeecCc----------cCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEec--CC----CCcceEEEEe
Q psy17820 102 EGWLWKQGGR----------YKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVH--DR----HKPHCFELFT 165 (210)
Q Consensus 102 ~G~L~k~~~~----------~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~--~~----~~~~~f~i~~ 165 (210)
.|+|++.... .....++||||-|+.|+||.++....|.+.|.+..+....+. +. +-.|.|+++.
T Consensus 495 ~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l 574 (1186)
T KOG1117|consen 495 CGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYL 574 (1186)
T ss_pred cceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcCCCCCCceeeccceEEEeecCCCCCCCcCceeEEEEee
Confidence 4999876321 124678999999999999999999999999999875443332 21 3457889888
Q ss_pred CCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 166 SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
++. |.+.|-+++.++...|..|+-+|
T Consensus 575 ~~e-------------------r~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 575 PGE-------------------RVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred ccc-------------------ceEEeecccHHHHHHHHHHHHHh
Confidence 764 89999999999999999998664
No 101
>KOG0248|consensus
Probab=97.79 E-value=1e-05 Score=70.14 Aligned_cols=89 Identities=21% Similarity=0.433 Sum_probs=66.2
Q ss_pred CCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeee
Q psy17820 98 NPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACK 175 (210)
Q Consensus 98 ~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~ 175 (210)
...++||+.+.+...+.|+|||++++.+.+.||+.+.+ ..|.+.+++....+.. ..+....|+++...
T Consensus 248 ~~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~--~~~~s~~fqli~~t-------- 317 (936)
T KOG0248|consen 248 TMEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSVTKLE--QQGAAYAFQLITST-------- 317 (936)
T ss_pred hhhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccccccceee--ccchhHHhhhhhhc--------
Confidence 34678999999988899999999999999999997765 5677878776533322 23345667776553
Q ss_pred cCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 176 TDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 176 ~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
..++|.++|+.-..+|+..|+
T Consensus 318 ------------~~~~~~~~s~~lt~dw~~iL~ 338 (936)
T KOG0248|consen 318 ------------DKMNFMTESERTTHDWVTILS 338 (936)
T ss_pred ------------eeEEEeccChhhhhhhHHHHH
Confidence 477788888877777777665
No 102
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.79 E-value=0.00012 Score=48.06 Aligned_cols=82 Identities=17% Similarity=0.279 Sum_probs=56.1
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccC-------CCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeee
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYT-------TDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIK 172 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~-------~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~ 172 (210)
..+|+|.+...+.. |.|-|.|-++.|.|-+-. +.-...-.|+|++..+...+ |.+...
T Consensus 4 v~eg~lvel~~~~r--K~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~-------~~~~~~------ 68 (96)
T cd01228 4 VKDSFLVELVEGSR--KLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEP-------FRIHNK------ 68 (96)
T ss_pred cccceeeeehhCCC--cceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecchh-------hhcccc------
Confidence 57899998764333 667777777777655421 12234567899887775542 333322
Q ss_pred eeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 173 ACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.++|.+.|.|..|+.+|+.+|+.
T Consensus 69 -------------~~KSf~~~asS~~Er~eW~~hI~~ 92 (96)
T cd01228 69 -------------NGKSYTFLLSSDYERSEWRESIQK 92 (96)
T ss_pred -------------CCceEEEEecCHHHHHHHHHHHHH
Confidence 237999999999999999999964
No 103
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.79 E-value=0.00055 Score=45.82 Aligned_cols=89 Identities=19% Similarity=0.147 Sum_probs=61.3
Q ss_pred ceeeEEeecC-ccCCeeEEEEEEeCCEEEEecc--CCCCCceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeeec
Q psy17820 101 KEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEY--TTDKEPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 101 ~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~~--~~~~~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~~ 176 (210)
.+|-|..-+. ..+.=++..+.|=++.|.|-.- ...-.....++|.+..|..+++. .-+++|.|.++.
T Consensus 4 ~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~t~~--------- 74 (100)
T cd01226 4 LYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAAGKYVMESTYSLNSVAVVNVKDRENAKKVLKLLIFP--------- 74 (100)
T ss_pred EcCcEEEechhhCCccceEEEEEeccEEEEEEecccceEEEEEEEehHHeEEEecCCCcCcCceEEEEeCC---------
Confidence 4555555543 2333355646666666665432 22233566789999988887765 457899998775
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+++.++|+|.++..+|++.|..
T Consensus 75 -----------~s~i~qaes~~~K~eWl~~le~ 96 (100)
T cd01226 75 -----------ESRIYQCESARIKTEWFEELEQ 96 (100)
T ss_pred -----------ccEEEEeCCHHHHHHHHHHHHH
Confidence 4888999999999999999975
No 104
>KOG3751|consensus
Probab=97.76 E-value=5.9e-05 Score=63.66 Aligned_cols=42 Identities=33% Similarity=0.657 Sum_probs=38.6
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
+.+.++|||+-++.+.|.|||-||||+...|+|+...+.+.+
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~~ 356 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKEP 356 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCCCCCc
Confidence 678999999999999999999999999999999998877664
No 105
>KOG1739|consensus
Probab=97.73 E-value=4e-05 Score=64.04 Aligned_cols=89 Identities=20% Similarity=0.413 Sum_probs=67.2
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCC--CceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeec
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK--EPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~--~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
....|+|.|.......|+-||++|+.+.|.||+++.+. -.+|.|.|....+..-+. ....|.|....
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahEf--De~rfdIsvn~--------- 92 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITAHEF--DECRFDISVND--------- 92 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCcccccc--hhheeeeEecc---------
Confidence 34678888777777799999999999999999987543 378889888755443222 23356665553
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
...++.+.+.+.++.|+++|..
T Consensus 93 -----------nv~~lra~~~~hr~~w~d~L~w 114 (611)
T KOG1739|consen 93 -----------NVWYLRAQDPDHRQQWIDALEW 114 (611)
T ss_pred -----------ceeeehhcCcHHHHHHHHHHHH
Confidence 4889999999999999999863
No 106
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.72 E-value=0.0012 Score=46.23 Aligned_cols=97 Identities=15% Similarity=0.328 Sum_probs=54.7
Q ss_pred ceeeEEeecCcc-----CCeeEEEEEEeC--CEEEEeccCCC-CC----ceeEEEeCCeEEEEecCCCCcceEEEEeCCc
Q psy17820 101 KEGWLWKQGGRY-----KSWKRRWFILND--KCLYYFEYTTD-KE----PRGIIPLENIQVREVHDRHKPHCFELFTSGF 168 (210)
Q Consensus 101 ~~G~L~k~~~~~-----~~wk~r~fvL~~--~~L~yy~~~~~-~~----~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~ 168 (210)
.-.||+|-.+.. ..-.+|||-|.. ..|++...... .. ....+.|..+..+..... .+... ..+.
T Consensus 11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~-~~~~~--~~~~- 86 (123)
T PF12814_consen 11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNP-SPPGL--KKPD- 86 (123)
T ss_pred cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCC-CCccc--cccc-
Confidence 456788866433 477899999975 56666654321 11 123456655433221111 11000 0000
Q ss_pred eeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 169 EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
...++++.++.|++.|.|++.++.+-|+.+|+-
T Consensus 87 --------~~~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~ 119 (123)
T PF12814_consen 87 --------HNKSIIIVTPDRSLDLTAPSRERHEIWFNALRY 119 (123)
T ss_pred --------cceEEEEEcCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 001123445569999999999999999999973
No 107
>KOG3723|consensus
Probab=97.65 E-value=1.5e-05 Score=67.81 Aligned_cols=92 Identities=32% Similarity=0.564 Sum_probs=65.7
Q ss_pred cCCcceeeEEeecC---ccCCeeEEEEEEeCCEEEEeccCCCC-CceeEEEeCCeEEEE-ec----CCCCcceEEEEeCC
Q psy17820 97 FNPDKEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTDK-EPRGIIPLENIQVRE-VH----DRHKPHCFELFTSG 167 (210)
Q Consensus 97 ~~~~~~G~L~k~~~---~~~~wk~r~fvL~~~~L~yy~~~~~~-~~~~~i~L~~~~v~~-~~----~~~~~~~f~i~~~~ 167 (210)
+.|..+|-|..+.| ..+.|+.|||.|.+..|.|-+..... .-...|+|..++-+. +. +..-+..|+|.+.+
T Consensus 733 gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD 812 (851)
T KOG3723|consen 733 GQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDDCPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD 812 (851)
T ss_pred CCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCCCCccHHHhhhHHHHHhhhhhcccchhhheeecC
Confidence 55677888875543 56799999999999999986643322 222457777543222 22 12345689999886
Q ss_pred ceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 168 FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
.++.|.|.++...++|+.+|+
T Consensus 813 --------------------~T~ILKaKDeKNAEEWlqCL~ 833 (851)
T KOG3723|consen 813 --------------------KTYILKAKDEKNAEEWLQCLN 833 (851)
T ss_pred --------------------ceEEeecccccCHHHHHHHHH
Confidence 489999999999999999986
No 108
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.60 E-value=0.00069 Score=46.50 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=62.1
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCC------CceeEEEeCCeEEEEec--CC-----CCcceEEEEe
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK------EPRGIIPLENIQVREVH--DR-----HKPHCFELFT 165 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~------~~~~~i~L~~~~v~~~~--~~-----~~~~~f~i~~ 165 (210)
+...|.|..+......=+.||..|-+..+...+...+. .-+..+.|..+.|...+ +. .-.++|.|..
T Consensus 4 ~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~ 83 (116)
T cd01223 4 PLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAH 83 (116)
T ss_pred cccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEe
Confidence 45667777665432334688888888888877754332 23455666666666543 22 2357888887
Q ss_pred CCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 166 SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
.++ ...+.|.|.|+++...|+.||.
T Consensus 84 ~~~------------------~~~~~f~~Ktee~K~kWm~al~ 108 (116)
T cd01223 84 KQG------------------KTGFTFYFKTEHLRKKWLKALE 108 (116)
T ss_pred cCC------------------CccEEEEeCCHHHHHHHHHHHH
Confidence 653 2479999999999999999985
No 109
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.59 E-value=0.0009 Score=43.63 Aligned_cols=84 Identities=25% Similarity=0.374 Sum_probs=57.6
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCC-EEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCC
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDK-CLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDS 178 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~-~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 178 (210)
.+.|.+.|+.+. .+++|=++|.+. .|.|+. +.....+|.|++....+.... .....|.|.++
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvd-p~~~~~KgeIp~s~~~l~v~~--~~~~~F~I~Tp------------ 64 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVD-PVKKVVKGEIPWSDVELRVEV--KNSSHFFVHTP------------ 64 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEc-CCcCeEEeEecccccceEEEE--ecCccEEEECC------------
Confidence 357888887764 559999999876 555554 445677899999872222111 12246777666
Q ss_pred CCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 179 EGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 179 ~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+|+|+|. |.+.....|+.+|..
T Consensus 65 --------~rty~le-D~~~~a~~W~~~I~~ 86 (89)
T cd01262 65 --------NKVYSFE-DPKGRASQWKKAIED 86 (89)
T ss_pred --------CceEEEE-CCCCCHHHHHHHHHH
Confidence 4799994 667889999999964
No 110
>KOG4424|consensus
Probab=97.55 E-value=0.00017 Score=61.67 Aligned_cols=100 Identities=25% Similarity=0.360 Sum_probs=71.9
Q ss_pred CCccccccCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCC-----CCCceeEEEeCCeEEEEecCCCCcceEEEE
Q psy17820 90 NDLMHTFFNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTT-----DKEPRGIIPLENIQVREVHDRHKPHCFELF 164 (210)
Q Consensus 90 ~~~~~~~~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~-----~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~ 164 (210)
.+++......+++|-|.|.......-..||++|-++.+.|.+..- ..++...+.+.++.+........++.|.+.
T Consensus 263 ~dIV~PsreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~~~~~~~tF~~~ 342 (623)
T KOG4424|consen 263 EDIVSPSRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDDNEELPHTFILT 342 (623)
T ss_pred ccccCcHHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcccccccCCceEEEe
Confidence 345555566789999999987777889999999888877765321 122334455555555444444556777765
Q ss_pred eCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 165 TSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.+ .|.+.|.|.|+++..+|+.+|+.
T Consensus 343 G~--------------------~r~vel~a~t~~ek~eWv~~I~~ 367 (623)
T KOG4424|consen 343 GK--------------------KRGVELQARTEQEKKEWVQAIQD 367 (623)
T ss_pred cc--------------------cceEEeecCchhhHHHHHHHHHH
Confidence 43 48999999999999999999974
No 111
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.52 E-value=0.00018 Score=49.00 Aligned_cols=39 Identities=18% Similarity=0.381 Sum_probs=34.8
Q ss_pred CeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 8 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 8 ~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
.++||+.--...-+.|||+|++|+...|.+|.+++....
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~sky 39 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGSRY 39 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCCCCee
Confidence 479999999888899999999999999999999876553
No 112
>KOG3543|consensus
Probab=97.48 E-value=2.3e-05 Score=67.56 Aligned_cols=92 Identities=22% Similarity=0.488 Sum_probs=64.5
Q ss_pred CCcceeeEEeecC-ccCCeeEEEEEEeCCEEEEec----cCCCCCceeEEEeCCeEEEEecCC----CCcceEEEEeCCc
Q psy17820 98 NPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFE----YTTDKEPRGIIPLENIQVREVHDR----HKPHCFELFTSGF 168 (210)
Q Consensus 98 ~~~~~G~L~k~~~-~~~~wk~r~fvL~~~~L~yy~----~~~~~~~~~~i~L~~~~v~~~~~~----~~~~~f~i~~~~~ 168 (210)
+...+|||+-.|. ..+.||+|||+|..-.-|.|. .+....|...|.|.|++|.-.++. ++.+-|.-+..
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~ffnavke-- 540 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKE-- 540 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHHHHHhcc--
Confidence 3456899998885 456999999999654333222 233467888999999999876554 23333332222
Q ss_pred eeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 169 EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
..++.|+.+++.|+.-|+.|+-+
T Consensus 541 ------------------gdtvifasddeqdr~lwvqamyr 563 (1218)
T KOG3543|consen 541 ------------------GDTVIFASDDEQDRHLWVQAMYR 563 (1218)
T ss_pred ------------------CceEEeccCchhhhhHHHHHHHH
Confidence 25889999999999999999843
No 113
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.42 E-value=0.00068 Score=45.58 Aligned_cols=64 Identities=27% Similarity=0.443 Sum_probs=42.7
Q ss_pred eCCEEEEec-cCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHH
Q psy17820 123 NDKCLYYFE-YTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKD 201 (210)
Q Consensus 123 ~~~~L~yy~-~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~ 201 (210)
.|..|.+|. .++...|.|+|+|.+++- +.. ++.+-|.+...+ ....|.|.|..|++
T Consensus 47 TGKGLLF~~K~~dka~P~GiinLadase-~~~--~g~~kF~f~~~G--------------------~khtF~A~s~aERD 103 (112)
T PF15406_consen 47 TGKGLLFFSKAEDKASPSGIINLADASE-PEK--DGSNKFHFKIKG--------------------HKHTFEAASAAERD 103 (112)
T ss_pred cCceEEEEeccccccCCcceEehhhccc-ccc--CCCceEEEEeCC--------------------ceeeeecCCHHHhc
Confidence 344455554 444568999999987532 122 233445554443 48899999999999
Q ss_pred HHHHHHhc
Q psy17820 202 EWIKCLSL 209 (210)
Q Consensus 202 ~Wi~al~~ 209 (210)
.|+.+|..
T Consensus 104 ~Wv~~lk~ 111 (112)
T PF15406_consen 104 NWVAQLKA 111 (112)
T ss_pred cHHHHhhc
Confidence 99999863
No 114
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.41 E-value=0.00074 Score=58.64 Aligned_cols=92 Identities=24% Similarity=0.360 Sum_probs=55.4
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCc-----------------eeEE--EeCCe-EEEEecCC---
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEP-----------------RGII--PLENI-QVREVHDR--- 155 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~-----------------~~~i--~L~~~-~v~~~~~~--- 155 (210)
...+|.+.+.++.. .||+||+.+.+..+--.....+..| ..+| ++... .+.+++..
T Consensus 373 ~~~~g~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (496)
T PTZ00283 373 TLYEGIVKKQSSDL-SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYTG 451 (496)
T ss_pred eeeeeEEecccCCc-ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhhC
Confidence 45678887766544 5999999886421111110001111 0122 22221 22333332
Q ss_pred -CCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhcC
Q psy17820 156 -HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSLH 210 (210)
Q Consensus 156 -~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 210 (210)
..++.|.+...++ +.+.|.|.++++++.||.+||++
T Consensus 452 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 488 (496)
T PTZ00283 452 SNAAHVFAVAFKTG-------------------RRLLFQARSDPERDAWMQKIQSV 488 (496)
T ss_pred CCCCcEEEEEecCC-------------------cEEEEecCCchhHHHHHHHHHHh
Confidence 3578888887764 89999999999999999999863
No 115
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.37 E-value=0.00011 Score=46.98 Aligned_cols=86 Identities=20% Similarity=0.342 Sum_probs=54.3
Q ss_pred eeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEE--ecC-CCCc----c--eEEEEeCCceeee
Q psy17820 102 EGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVRE--VHD-RHKP----H--CFELFTSGFEFIK 172 (210)
Q Consensus 102 ~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~--~~~-~~~~----~--~f~i~~~~~~~~~ 172 (210)
+|||+.... ..-+|||.+|++..+.+|.+... ..+..+.|+...+.. ++- ...+ . .|-.+.+++
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~KGG-~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~---- 73 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDKGG-QYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSR---- 73 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEecccCC-ceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCc----
Confidence 588887642 23478999999999998887643 345666666432211 110 1111 2 333333332
Q ss_pred eeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 173 ACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.+.+-|+|.+.++.||++|++
T Consensus 74 ---------------~~~~~FA~S~~~~~~Wi~~mN~ 95 (104)
T PF15408_consen 74 ---------------RHVQCFASSKKVCQSWIQVMNS 95 (104)
T ss_pred ---------------chhhhhhhHHHHHHHHHHHhcC
Confidence 5677889999999999999974
No 116
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=97.31 E-value=5.5e-05 Score=50.71 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=35.8
Q ss_pred CCCeeeEEEeeCC-CCCCceeEEEEEeCCEEEEEeecCCccccc
Q psy17820 6 NPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKSACL 48 (210)
Q Consensus 6 ~~~~~G~L~K~g~-~~~~wkrRwfvL~~~~L~Yy~~~~~~~~~~ 48 (210)
+++.+||+.|.|| ....|++|||.|-.+.|-+|....++.+.+
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~eL 45 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKPEL 45 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCCcE
Confidence 5678999999999 678999999999999999987655555443
No 117
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.28 E-value=0.00054 Score=47.09 Aligned_cols=38 Identities=26% Similarity=0.543 Sum_probs=31.3
Q ss_pred CeeeEEEee--CCCCCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 8 DKEGWLWKQ--GGRYKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 8 ~~~G~L~K~--g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
..+|||.-. ++..++|+|+|+||.+..|+.|..+.++.
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~ 42 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRA 42 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCcccc
Confidence 579999643 44567999999999999999999887654
No 118
>PF15404 PH_4: Pleckstrin homology domain
Probab=97.26 E-value=0.0079 Score=45.01 Aligned_cols=34 Identities=18% Similarity=0.423 Sum_probs=31.0
Q ss_pred eeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecC
Q psy17820 9 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTT 42 (210)
Q Consensus 9 ~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~ 42 (210)
++|.|+.+.+....|+++++||..|.|.-|....
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~ 34 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFK 34 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEe
Confidence 5899999999999999999999999999998653
No 119
>KOG0705|consensus
Probab=97.26 E-value=5.5e-05 Score=64.54 Aligned_cols=38 Identities=34% Similarity=0.577 Sum_probs=32.8
Q ss_pred CCCeeeEEEeeCC--CCCCceeEEEEEe-CCEEEEEeecCC
Q psy17820 6 NPDKEGWLWKQGG--RYKSWKRRWFILN-DKCLYYFEYTTD 43 (210)
Q Consensus 6 ~~~~~G~L~K~g~--~~~~wkrRwfvL~-~~~L~Yy~~~~~ 43 (210)
-++|+|.|.|+++ .++.||+.|+.|. ++.|.||.+-.|
T Consensus 301 IPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~d 341 (749)
T KOG0705|consen 301 IPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLGD 341 (749)
T ss_pred cchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHHH
Confidence 4789999999998 3499999999995 789999997765
No 120
>KOG4424|consensus
Probab=97.23 E-value=0.00042 Score=59.36 Aligned_cols=77 Identities=19% Similarity=0.343 Sum_probs=57.4
Q ss_pred cCCeeEEEEEE---eCCEEEEeccCCCCCceeEEEeCCeEEEEecCC---CCcceEEEEeCCceeeeeeecCCCCceeee
Q psy17820 112 YKSWKRRWFIL---NDKCLYYFEYTTDKEPRGIIPLENIQVREVHDR---HKPHCFELFTSGFEFIKACKTDSEGKVVEG 185 (210)
Q Consensus 112 ~~~wk~r~fvL---~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~---~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 185 (210)
.+.|..-|+++ .+..++.|..+++......|+|.++.+...+.. +..+.|.++.
T Consensus 510 ~~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~-------------------- 569 (623)
T KOG4424|consen 510 GKTGILAWSVVPKSDPLVDYSYGSPQDVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQ-------------------- 569 (623)
T ss_pred CccceeeeeeccCCCCccccccCCccccccccccccCccccCCCcccccchhcchhhhhh--------------------
Confidence 46899999988 355788888888888889999999877643333 2233333332
Q ss_pred cceEEEEEcCCHHHHHHHHHHHh
Q psy17820 186 KHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 186 ~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
.+..++|.|++++-.+.|++.|-
T Consensus 570 s~~~~~~~a~~~q~qq~wl~~l~ 592 (623)
T KOG4424|consen 570 SHLSWHLAADDEQLQQRWLEVLL 592 (623)
T ss_pred hcceeeeccCCHHHHHHHHHHHH
Confidence 24689999999999999998774
No 121
>KOG2059|consensus
Probab=96.94 E-value=0.001 Score=58.33 Aligned_cols=74 Identities=19% Similarity=0.201 Sum_probs=50.2
Q ss_pred CCeeeEEEeeCCC-----CCCceeEEEEEeCCEEEEEeecCCcccccccCCcce------------------ecccceeE
Q psy17820 7 PDKEGWLWKQGGR-----YKSWKRRWFILNDKCLYYFEYTTDKSACLIENSSGR------------------YKSWKRRW 63 (210)
Q Consensus 7 ~~~~G~L~K~g~~-----~~~wkrRwfvL~~~~L~Yy~~~~~~~~~~i~~~~~~------------------~~~~~~~~ 63 (210)
+.++|.|.|+..+ .++||+|||.|++..|+|-|+......+.|...+|. -..++..|
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~drtly 644 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGKQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDRTLY 644 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCccCcccceeHHHHHHHHHhhhhccCCCceEEEEecCccee
Confidence 3445555555432 468899999999999999999988776555554441 11234567
Q ss_pred EEechh--HHHHHHhhhcC
Q psy17820 64 FILNDK--CLYYFEYTTDK 80 (210)
Q Consensus 64 ~~~~~~--~~~~~~~i~~~ 80 (210)
++++.. ...|.+++...
T Consensus 645 ~Q~~n~vEandWldaL~kv 663 (800)
T KOG2059|consen 645 VQAKNCVEANDWLDALRKV 663 (800)
T ss_pred EecCCchHHHHHHHHHHHH
Confidence 777654 77888888654
No 122
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=96.84 E-value=0.0072 Score=42.10 Aligned_cols=34 Identities=32% Similarity=0.687 Sum_probs=25.2
Q ss_pred eeeEEEeeC-----C-----CCCCceeEEEEEeCCEEEEEeecC
Q psy17820 9 KEGWLWKQG-----G-----RYKSWKRRWFILNDKCLYYFEYTT 42 (210)
Q Consensus 9 ~~G~L~K~g-----~-----~~~~wkrRwfvL~~~~L~Yy~~~~ 42 (210)
|+|||..+- + ..+.|+.-|+||+++.|..|+++.
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~ 45 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEK 45 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHH
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCc
Confidence 789998841 1 467899999999999999999853
No 123
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.74 E-value=0.0039 Score=42.25 Aligned_cols=37 Identities=22% Similarity=0.652 Sum_probs=30.0
Q ss_pred eeeEEEeeCC--C--CCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 9 KEGWLWKQGG--R--YKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 9 ~~G~L~K~g~--~--~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
.+|||.-... . .++|+|+|+||.+..|..|.++.++.
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~ 42 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKE 42 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcccc
Confidence 6899965443 2 35999999999999999999887764
No 124
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=96.73 E-value=0.013 Score=38.98 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=49.5
Q ss_pred cCCeeEEEEEEe----CCEEEEecc--CCCCCceeEEEeCC------eEEEEecCCCCcceEEEEeCCceeeeeeecCCC
Q psy17820 112 YKSWKRRWFILN----DKCLYYFEY--TTDKEPRGIIPLEN------IQVREVHDRHKPHCFELFTSGFEFIKACKTDSE 179 (210)
Q Consensus 112 ~~~wk~r~fvL~----~~~L~yy~~--~~~~~~~~~i~L~~------~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 179 (210)
...|.+.-.+|. |..|.+|.. +....|+-.+.... ++..+.+ ++.++|.|.-.++
T Consensus 18 ~~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmP--D~~nTFvLK~~~~----------- 84 (107)
T cd01231 18 GARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMP--DNLYTFVLKVDDN----------- 84 (107)
T ss_pred ccccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhccccccc--CcccEEEEEecCC-----------
Confidence 357888777774 234444444 55556665554432 2222223 4567787765442
Q ss_pred CceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 180 GKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 180 ~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
-.|.|.|.+++++++|+..|+-
T Consensus 85 --------~eyI~Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 85 --------TDIIFEVGDEQQLNSWLAELRY 106 (107)
T ss_pred --------ceEEEEcCCHHHHHHHHHHHhc
Confidence 5899999999999999999973
No 125
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.69 E-value=0.062 Score=37.09 Aligned_cols=78 Identities=17% Similarity=0.333 Sum_probs=48.6
Q ss_pred eEEEEEEeCCEEEEeccCCC----CCc----eeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeecc
Q psy17820 116 KRRWFILNDKCLYYFEYTTD----KEP----RGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKH 187 (210)
Q Consensus 116 k~r~fvL~~~~L~yy~~~~~----~~~----~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 187 (210)
+.|-+.|-...|.+-+...+ ..| +..|.+..+.+.+..+ +.+..|+|...+.. .+.
T Consensus 25 ~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v~-gd~~kF~i~~~~~~---------------~~~ 88 (114)
T cd01232 25 RERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHVE-GDPCRFALWSGDPP---------------ISD 88 (114)
T ss_pred ceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEccC-CCCceEEEEeCCCC---------------CCc
Confidence 44555555555555543221 122 3556777766655433 34567888665431 013
Q ss_pred eEEEEEcCCHHHHHHHHHHHhc
Q psy17820 188 TVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 188 r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.+|.++|.|.++.+.|+..|++
T Consensus 89 ~~~ilqA~s~e~K~~W~~~I~~ 110 (114)
T cd01232 89 NRIILKANSQETKQEWVKKIRE 110 (114)
T ss_pred eEEEEECCCHHHHHHHHHHHHH
Confidence 6899999999999999999985
No 126
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=96.42 E-value=0.0063 Score=54.06 Aligned_cols=37 Identities=24% Similarity=0.490 Sum_probs=31.4
Q ss_pred CCCCeeeEEEeeCC---CCCCceeEEEEEeCCEEEEEeec
Q psy17820 5 FNPDKEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYT 41 (210)
Q Consensus 5 ~~~~~~G~L~K~g~---~~~~wkrRwfvL~~~~L~Yy~~~ 41 (210)
..+.++|||+.-|. +..-.++|||||++..|.|||..
T Consensus 2 ~~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~ 41 (719)
T PLN00188 2 SKVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKK 41 (719)
T ss_pred CcceEeeEEEEEcccccccccceeEEEEEecchhhhcccC
Confidence 35779999999988 34557999999999999999964
No 127
>PLN02866 phospholipase D
Probab=96.40 E-value=0.016 Score=53.75 Aligned_cols=43 Identities=21% Similarity=0.388 Sum_probs=34.2
Q ss_pred CCCCCCeeeEEEee-----CC-C--------------CCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 3 TFFNPDKEGWLWKQ-----GG-R--------------YKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 3 ~~~~~~~~G~L~K~-----g~-~--------------~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
.|-+-.+|||+.|+ ++ . ..+|+||||||+++.|.|.++..+..
T Consensus 178 ~~g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~ 240 (1068)
T PLN02866 178 EYGPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAK 240 (1068)
T ss_pred hcCCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCc
Confidence 45677899999999 22 1 24799999999999999998776654
No 128
>KOG1739|consensus
Probab=96.37 E-value=0.0031 Score=53.12 Aligned_cols=40 Identities=20% Similarity=0.449 Sum_probs=33.9
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
+..+|+|.|.-.-...|+-|||||+++.|+||+++.++..
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~~h 63 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDETEH 63 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhhhhc
Confidence 3467888888777789999999999999999999987653
No 129
>KOG3640|consensus
Probab=96.05 E-value=0.0027 Score=57.37 Aligned_cols=41 Identities=22% Similarity=0.620 Sum_probs=34.5
Q ss_pred CCCCeeeEEEee--CCCCCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 5 FNPDKEGWLWKQ--GGRYKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 5 ~~~~~~G~L~K~--g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
..+...|||.-- +.+++.|.||||+|.++++.|++.+.|..
T Consensus 988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEk 1030 (1116)
T KOG3640|consen 988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEK 1030 (1116)
T ss_pred cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhc
Confidence 467788999875 44789999999999999999999776643
No 130
>KOG3551|consensus
Probab=95.96 E-value=0.0033 Score=51.62 Aligned_cols=123 Identities=19% Similarity=0.215 Sum_probs=79.3
Q ss_pred HHHHHHhhhcCCccccCCCCCCcccc---ccCCcceeeEEeec--CccCCeeEEEEEEeCCEEEEeccCCC-----CCce
Q psy17820 70 CLYYFEYTTDKPFKIPEDDGNDLMHT---FFNPDKEGWLWKQG--GRYKSWKRRWFILNDKCLYYFEYTTD-----KEPR 139 (210)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~G~L~k~~--~~~~~wk~r~fvL~~~~L~yy~~~~~-----~~~~ 139 (210)
...|+.+|.+..-.+.+.--+++... ..+..+-|||.++- ++.+.|+..+.+|....|.+|.+-.- ..|.
T Consensus 260 A~~Wf~AiHa~v~~ll~rvlaE~n~~Lg~t~evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~ 339 (506)
T KOG3551|consen 260 ADSWFEAIHANVNTLLTRVLAEVNAMLGNTSEVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPR 339 (506)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhcccchhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChh
Confidence 78999998765433322111111111 12455689998874 45668999999999999998886432 4567
Q ss_pred eEEEeCCeEEEEecCC------CCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 140 GIIPLENIQVREVHDR------HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 140 ~~i~L~~~~v~~~~~~------~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
...+|-..+++-..+. +..-.|...+-..+.| .++.|++|+..|+-.|...|-
T Consensus 340 ~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~RtGTrqGV----------------~thlfrvEThrdLa~WtRslV 398 (506)
T KOG3551|consen 340 HTYPLVATRLVHSGSGKGSVIKGLTLSFATRTGTRQGV----------------ETHLFRVETHRELAAWTRSLV 398 (506)
T ss_pred hhhhhhhhhheecCCCCCCCcCCceEEEEEecccccce----------------EEEEEEeccHHHHHHHHHHHH
Confidence 7777765444432222 1223566655543332 699999999999999998773
No 131
>KOG4236|consensus
Probab=95.74 E-value=0.016 Score=50.07 Aligned_cols=90 Identities=24% Similarity=0.472 Sum_probs=63.4
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCe-EEEEe------cCCCCcceEEEEeCCceee
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENI-QVREV------HDRHKPHCFELFTSGFEFI 171 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~-~v~~~------~~~~~~~~f~i~~~~~~~~ 171 (210)
..++||+..-...-..=||.|-.|....+..|.+.....-...|+|..+ +|+.. ++...++||+|.+..
T Consensus 413 ~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~---- 488 (888)
T KOG4236|consen 413 KLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNESTNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTAT---- 488 (888)
T ss_pred hhhcceEEEEechhhhhhhhhheeccceeEeeecCCCceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEeee----
Confidence 4578998765432222367788899999999999888777788999864 33332 344678999998763
Q ss_pred eeeecCCCCceeeecceEEEEEcCC------------HHHHHHHHHHHhc
Q psy17820 172 KACKTDSEGKVVEGKHTVYRMSAAT------------AEEKDEWIKCLSL 209 (210)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~l~a~s------------~~e~~~Wi~al~~ 209 (210)
..||..++ .+..+.|-.||++
T Consensus 489 -----------------~vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~ 521 (888)
T KOG4236|consen 489 -----------------TVYFVGENPSSTPGGESGVGLDAAQGWETAIQQ 521 (888)
T ss_pred -----------------EEEEecCCCCCCccccccccchhhccCchhhhh
Confidence 55555665 4457889888875
No 132
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.47 E-value=0.19 Score=35.60 Aligned_cols=75 Identities=20% Similarity=0.423 Sum_probs=46.2
Q ss_pred eEEEEEEeCCEEEEeccCCC-----CCc----eeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeec
Q psy17820 116 KRRWFILNDKCLYYFEYTTD-----KEP----RGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGK 186 (210)
Q Consensus 116 k~r~fvL~~~~L~yy~~~~~-----~~~----~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 186 (210)
+.|...|-...+.+.+...+ ..| +..|.+....+.+.. .+.+..|+|-..+.
T Consensus 30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglte~v-~gd~~kFeiw~~~~------------------ 90 (133)
T cd01227 30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGITENV-KGDTKKFEIWYNAR------------------ 90 (133)
T ss_pred ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecccccccC-CCCccEEEEEeCCC------------------
Confidence 45666666665555553321 122 333445444333321 23466788876543
Q ss_pred ceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 187 HTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 187 ~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
...|.|+|.|.+..+.|+..|++
T Consensus 91 ~~~yilqA~t~e~K~~Wv~~I~~ 113 (133)
T cd01227 91 EEVYILQAPTPEIKAAWVNEIRK 113 (133)
T ss_pred CcEEEEEcCCHHHHHHHHHHHHH
Confidence 35899999999999999999975
No 133
>KOG1737|consensus
Probab=95.17 E-value=0.015 Score=52.48 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=33.7
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCc
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~ 44 (210)
...+|||.|.....++|++|||+|.++.|+||.+....
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~ 114 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFS 114 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCcc
Confidence 35679999999999999999999999999999877653
No 134
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.03 E-value=0.16 Score=34.46 Aligned_cols=30 Identities=37% Similarity=0.273 Sum_probs=25.9
Q ss_pred CeeeEEEeeCCCCCCceeEEEEEeCCEEEEEe
Q psy17820 8 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFE 39 (210)
Q Consensus 8 ~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~ 39 (210)
+++|-|.|.. .+.-+.|+|.|-++.|.|-+
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~ 34 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGN 34 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEE
Confidence 5799999999 56668899999999999954
No 135
>KOG1737|consensus
Probab=95.02 E-value=0.015 Score=52.57 Aligned_cols=87 Identities=20% Similarity=0.306 Sum_probs=59.1
Q ss_pred CcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC--CCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeec
Q psy17820 99 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD--KEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 99 ~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~--~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
.-.+|||.|.....++|.+|||+|.++.|.||.+... ..+.+.+.+....+...+. +.+....+
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~------~~~~~~~~-------- 142 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGER------MDICSVDG-------- 142 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCC------cccchhhc--------
Confidence 3468999999988899999999999999999987654 4466667665443322111 11111110
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
+...+++.+.+..+...|+.+++
T Consensus 143 ---------~~q~~~~~~~~~~~~~~~~~~~~ 165 (799)
T KOG1737|consen 143 ---------SCQIYLVELSKKLQRQGWLHALE 165 (799)
T ss_pred ---------ccchhhhhhhHHHhhcchhhhhh
Confidence 12467788888899999998876
No 136
>PF15411 PH_10: Pleckstrin homology domain
Probab=94.81 E-value=0.87 Score=31.52 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=50.6
Q ss_pred CCeeEEEEEEeCCEEEEeccCCCC-------------------CceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeee
Q psy17820 113 KSWKRRWFILNDKCLYYFEYTTDK-------------------EPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKA 173 (210)
Q Consensus 113 ~~wk~r~fvL~~~~L~yy~~~~~~-------------------~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~ 173 (210)
..|+...+-|=...|.+++..... ..+|.|.+.+++-....+..+.+.+.|.-.+..
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~~g~~~L~i~w~~d~---- 94 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSKPGSYSLQISWKGDP---- 94 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCCCCceEEEEEEcCCC----
Confidence 568888888888888777743211 124555555432222223345677777763221
Q ss_pred eecCCCCceeeecceEEEEEcCCHHHHHHHHHHH
Q psy17820 174 CKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCL 207 (210)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al 207 (210)
....|.|...+++.++.|-.+|
T Consensus 95 ------------e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 95 ------------ELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred ------------CCceEEEEeCCHHHHHHHHhhC
Confidence 1258999999999999999886
No 137
>KOG3549|consensus
Probab=94.52 E-value=0.02 Score=46.60 Aligned_cols=121 Identities=17% Similarity=0.200 Sum_probs=72.9
Q ss_pred HHHHHHhhhcCCccccCCCCCC---ccccccCCcceeeEEeecC---ccCCeeEEEEEEeCCEEEEeccCCCCCc-----
Q psy17820 70 CLYYFEYTTDKPFKIPEDDGND---LMHTFFNPDKEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTDKEP----- 138 (210)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~G~L~k~~~---~~~~wk~r~fvL~~~~L~yy~~~~~~~~----- 138 (210)
...|..+|......+......- --++......-||....-. ....++.+|..|+|..++.|..+.-...
T Consensus 249 ~~dWL~ait~Ni~~LT~~nmK~~Nrnf~v~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPPv~t~dw~rA 328 (505)
T KOG3549|consen 249 LSDWLKAITDNIVGLTHLNMKLYNRNFAVGEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPPVNTADWSRA 328 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCCcchhhhhhh
Confidence 6788888766543332111000 0112234556799876532 2336789999999999999987743211
Q ss_pred eeEEEeCC--eEEEE-e-cCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 139 RGIIPLEN--IQVRE-V-HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 139 ~~~i~L~~--~~v~~-~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.....+-. +.|.. . ....+++||.|...++ ...||..+.+.|+-.|-.+++.
T Consensus 329 e~ty~vye~mfki~Kdsd~~D~R~~CF~~qs~~g-------------------e~~yfsVEl~seLa~wE~sfq~ 384 (505)
T KOG3549|consen 329 EVTYKVYETMFKIVKDSDTVDSRQHCFLLQSSGG-------------------EPRYFSVELRSELARWENSFQA 384 (505)
T ss_pred hhhHHHHHHHHHHhccccccccccceEEEEcCCC-------------------CceEEEEehhhHHHHHHHHHhh
Confidence 00000000 11111 1 1236889999987654 6899999999999999988774
No 138
>KOG1738|consensus
Probab=94.18 E-value=0.0055 Score=53.24 Aligned_cols=57 Identities=21% Similarity=0.524 Sum_probs=46.9
Q ss_pred CCcceeeEEeecC---ccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecC
Q psy17820 98 NPDKEGWLWKQGG---RYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHD 154 (210)
Q Consensus 98 ~~~~~G~L~k~~~---~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~ 154 (210)
.-+++|||++++. ....|++.||+|.+..|+.|.+++...+.++|.|...+|....+
T Consensus 561 ~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~~~~i~~a~e 620 (638)
T KOG1738|consen 561 RGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLPLFTISVAEE 620 (638)
T ss_pred cchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeeccchhhhhHHH
Confidence 3456889887653 23489999999999999999999999999999999888766544
No 139
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.09 E-value=0.8 Score=31.47 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=20.4
Q ss_pred eEEEEEcCCHHHHHHHHHHHhc
Q psy17820 188 TVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 188 r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
+.+.|.|+|.++.+.|+..|+.
T Consensus 93 k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 93 KSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred eEEEEEECCHHHHHHHHHHHhh
Confidence 6899999999999999999975
No 140
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.08 E-value=0.37 Score=32.57 Aligned_cols=25 Identities=28% Similarity=0.526 Sum_probs=19.7
Q ss_pred eeeEEEeeCC--CCCCceeEEEEEeCC
Q psy17820 9 KEGWLWKQGG--RYKSWKRRWFILNDK 33 (210)
Q Consensus 9 ~~G~L~K~g~--~~~~wkrRwfvL~~~ 33 (210)
++|||+.+.+ ....|-|.||....+
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~ 27 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKE 27 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcC
Confidence 6899999976 334899999998653
No 141
>PF15404 PH_4: Pleckstrin homology domain
Probab=93.84 E-value=0.13 Score=38.59 Aligned_cols=49 Identities=22% Similarity=0.377 Sum_probs=37.3
Q ss_pred ceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC-----------CCceeEEEeCCeEE
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD-----------KEPRGIIPLENIQV 149 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~-----------~~~~~~i~L~~~~v 149 (210)
++|.|+.+.+.-..|+++++||..+.|..|+.... ..-...|+|.+|-|
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYv 60 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYV 60 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceE
Confidence 47999999988889999999999999999885211 11235678876654
No 142
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=93.62 E-value=0.66 Score=33.02 Aligned_cols=110 Identities=22% Similarity=0.271 Sum_probs=41.1
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC------CCceeEEEeCCeEEEEecCCCCcceE------EEEe--
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD------KEPRGIIPLENIQVREVHDRHKPHCF------ELFT-- 165 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~------~~~~~~i~L~~~~v~~~~~~~~~~~f------~i~~-- 165 (210)
++.|-|.+++.....|..-.+.|=++.|..-+.... ..-...|+|+-..++..++....... .+..
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~~ 81 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISSS 81 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S------
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCCc
Confidence 357888888876667888888888888877664321 11234577766555543322100000 0000
Q ss_pred CCc-eee-eeeecCCCC---cee--ee-cceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 166 SGF-EFI-KACKTDSEG---KVV--EG-KHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 166 ~~~-~~~-~~~~~~~~~---~~~--~~-~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
... ... .....+... +.+ .| ....|.|.|+|..++++|+++|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 82 SSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp -SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred cCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 000 000 000000000 001 11 224689999999999999999964
No 143
>PF15408 PH_7: Pleckstrin homology domain
Probab=93.54 E-value=0.037 Score=35.62 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=28.3
Q ss_pred eeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCcc
Q psy17820 10 EGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKS 45 (210)
Q Consensus 10 ~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~ 45 (210)
+|||+... ...-+|||.+|++..|.+|.+.....
T Consensus 1 EGYLY~~E--~~si~rRF~~L~~K~~~~~~~KGG~~ 34 (104)
T PF15408_consen 1 EGYLYRDE--DSSIQRRFVMLRSKQFNMYEDKGGQY 34 (104)
T ss_pred CCeEEEec--cchHHHHHHhhhhceeEEecccCCce
Confidence 68998876 44668999999999999999887654
No 144
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.18 E-value=0.22 Score=34.20 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=34.2
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
|+-+++|=|.|-+...+..+.|+|-|-|+.|.|.+....
T Consensus 2 ~elI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~ 40 (112)
T cd01261 2 NEFIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHG 40 (112)
T ss_pred ccccccCcEEEEecccCCcceEEEEEecCeEEEEEeccC
Confidence 456889999999987888999999999999999996554
No 145
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.16 E-value=0.71 Score=30.23 Aligned_cols=41 Identities=27% Similarity=0.178 Sum_probs=31.0
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCC-EEEEEeecCCcccccc
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDK-CLYYFEYTTDKSACLI 49 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~-~L~Yy~~~~~~~~~~i 49 (210)
+.+.|.+.|+.|. .+|+|=++|++. .|.|++..+....+-|
T Consensus 1 Il~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~~~~~KgeI 42 (89)
T cd01262 1 ILKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPVKKVVKGEI 42 (89)
T ss_pred Cceeeeeeehhcc--ccceeeEEEecCceEEEEcCCcCeEEeEe
Confidence 3578999999984 459999999865 8999987766544333
No 146
>KOG4807|consensus
Probab=92.60 E-value=0.00031 Score=57.43 Aligned_cols=77 Identities=30% Similarity=0.557 Sum_probs=59.5
Q ss_pred CCeeEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceE
Q psy17820 113 KSWKRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTV 189 (210)
Q Consensus 113 ~~wk~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~ 189 (210)
..|++.||++.+..+-||.+... ...-+.|+|..|+-...-...+.+.|+|-+.+ ..
T Consensus 33 ~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~q~nY~~~i~~~~--------------------~~ 92 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKD--------------------AV 92 (593)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHHHhccceeecccc--------------------hh
Confidence 36999999999999999987543 34567889988764332233566888887665 37
Q ss_pred EEEEcCCHHHHHHHHHHHhc
Q psy17820 190 YRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 190 ~~l~a~s~~e~~~Wi~al~~ 209 (210)
|.|.+-+...+..|+.|+++
T Consensus 93 ~tL~~~~s~Ir~~~~~A~~k 112 (593)
T KOG4807|consen 93 YTLSAMTSGIRRNWIEALRK 112 (593)
T ss_pred hhhHHHHHHHHHHHHHHHHh
Confidence 88999999999999999974
No 147
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=92.54 E-value=1.3 Score=31.54 Aligned_cols=80 Identities=21% Similarity=0.388 Sum_probs=50.6
Q ss_pred EEEEEeCCEEEEeccCCCCC----------------c---eeEEEeCCeEEEEecC--CCCcceEEEEeCCceeeeeeec
Q psy17820 118 RWFILNDKCLYYFEYTTDKE----------------P---RGIIPLENIQVREVHD--RHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 118 r~fvL~~~~L~yy~~~~~~~----------------~---~~~i~L~~~~v~~~~~--~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
--||.+...+..|++..... | +..|++...+|..... ......++|++..++
T Consensus 52 ~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe------- 124 (160)
T cd01255 52 MCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAADMESNFLWELIHLKSE------- 124 (160)
T ss_pred EEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcCcccceEEEEEeeccc-------
Confidence 35777777777777543211 1 2245565555554433 245567788766431
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.+ --+++.|.|++.+.+.+..-+..|++
T Consensus 125 -~e----gRpE~vfqLCcS~~E~k~~flK~Irs 152 (160)
T cd01255 125 -LE----GRPEKVFVLCCSTAESRNAFLKTIRS 152 (160)
T ss_pred -cc----CCCcceEEEecCCHHHHHHHHHHHHH
Confidence 01 11568999999999999999999875
No 148
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.53 E-value=0.17 Score=34.46 Aligned_cols=33 Identities=24% Similarity=0.582 Sum_probs=27.4
Q ss_pred eEEEeeCC----CCCCceeEEEEEeCCEEEEEeecCC
Q psy17820 11 GWLWKQGG----RYKSWKRRWFILNDKCLYYFEYTTD 43 (210)
Q Consensus 11 G~L~K~g~----~~~~wkrRwfvL~~~~L~Yy~~~~~ 43 (210)
|||..+-. ..++||.||++|++..|.-|++..-
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~ 39 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPL 39 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCC
Confidence 89988833 3589999999999999999997643
No 149
>KOG3523|consensus
Probab=90.03 E-value=0.64 Score=40.82 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=46.5
Q ss_pred CeeEEEEEEeCCEEEEeccCCC-------CCceeEEEeCCeEEEEec------CCCCcceEEEEeCCceeeeeeecCCCC
Q psy17820 114 SWKRRWFILNDKCLYYFEYTTD-------KEPRGIIPLENIQVREVH------DRHKPHCFELFTSGFEFIKACKTDSEG 180 (210)
Q Consensus 114 ~wk~r~fvL~~~~L~yy~~~~~-------~~~~~~i~L~~~~v~~~~------~~~~~~~f~i~~~~~~~~~~~~~~~~~ 180 (210)
..+..|+.|-++.|.+-+.... ..+...+.++.+.-..-. ..++++.|.+..-.+
T Consensus 498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N------------ 565 (695)
T KOG3523|consen 498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSN------------ 565 (695)
T ss_pred ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhc------------
Confidence 4567788888888877665432 123333333322210000 113456676653321
Q ss_pred ceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 181 KVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 181 ~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
-.+..-.+.|+|+|+.|++.||.||.
T Consensus 566 --~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 566 --HQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred --cCCCceeeeecCCchHHHHHHHHhcC
Confidence 01123489999999999999999986
No 150
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=89.20 E-value=0.46 Score=41.09 Aligned_cols=34 Identities=24% Similarity=0.527 Sum_probs=28.2
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEe
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFE 39 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~ 39 (210)
+.+...|||.|.+...+ |++|||.+.++.+....
T Consensus 375 sDv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~ 408 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISL 408 (478)
T ss_pred CCcccceEEeccCCCcc-hhhheEEecCCceEEEe
Confidence 56788999999998665 99999999987766654
No 151
>KOG3727|consensus
Probab=89.16 E-value=0.043 Score=47.29 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=50.8
Q ss_pred cCCeeEEEEEEeC----CEEEEeccCCCCCceeEEEeCCeEEEEe-cCCCCcc-eEEEEeCCceeeeeeecCCCCceeee
Q psy17820 112 YKSWKRRWFILND----KCLYYFEYTTDKEPRGIIPLENIQVREV-HDRHKPH-CFELFTSGFEFIKACKTDSEGKVVEG 185 (210)
Q Consensus 112 ~~~wk~r~fvL~~----~~L~yy~~~~~~~~~~~i~L~~~~v~~~-~~~~~~~-~f~i~~~~~~~~~~~~~~~~~~~~~~ 185 (210)
.+..+|.||...+ ..+.||++. ..|...|.+.+|.+.+. +....++ .|-|+....
T Consensus 372 ~Kg~kr~f~t~~dl~~~~~~s~~~s~--~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~----------------- 432 (664)
T KOG3727|consen 372 LKGYKRYFFTFRDLHLSLYKSSEDSR--GAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAE----------------- 432 (664)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHhhhc--CCCCCchhhcCcccCCccccccccceEEEEeecCC-----------------
Confidence 4566666665544 344454444 56888899999887653 3333332 333333321
Q ss_pred cceEEEEEcCCHHHHHHHHHHHh
Q psy17820 186 KHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 186 ~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
....++|+|+++...-.||.|.+
T Consensus 433 ~msEi~LRCd~E~QYA~WMAaCr 455 (664)
T KOG3727|consen 433 GMSEIWLRCDNEQQYARWMAACR 455 (664)
T ss_pred ccceeEEecCCHHHHHHHHHHhh
Confidence 24689999999999999999976
No 152
>KOG1738|consensus
Probab=88.94 E-value=0.075 Score=46.48 Aligned_cols=46 Identities=26% Similarity=0.611 Sum_probs=35.9
Q ss_pred CCeeeEEEeeCCC---CCCceeEEEEEeCCEEEEEeecCCccc-ccccCC
Q psy17820 7 PDKEGWLWKQGGR---YKSWKRRWFILNDKCLYYFEYTTDKSA-CLIENS 52 (210)
Q Consensus 7 ~~~~G~L~K~g~~---~~~wkrRwfvL~~~~L~Yy~~~~~~~~-~~i~~~ 52 (210)
-.++|||++++-. ...|++-||||+|+-|+.|.++.++.+ .+|..+
T Consensus 562 G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~ 611 (638)
T KOG1738|consen 562 GDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLP 611 (638)
T ss_pred chhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeecc
Confidence 3567999998773 457999999999999999998887664 344433
No 153
>KOG2070|consensus
Probab=88.45 E-value=0.75 Score=39.46 Aligned_cols=75 Identities=20% Similarity=0.385 Sum_probs=54.3
Q ss_pred eEEEEEEeCCEEEEeccCCC---CCceeEEEeCCeEEEEecCC-CCcceEEEEeCCceeeeeeecCCCCceeeecceEEE
Q psy17820 116 KRRWFILNDKCLYYFEYTTD---KEPRGIIPLENIQVREVHDR-HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYR 191 (210)
Q Consensus 116 k~r~fvL~~~~L~yy~~~~~---~~~~~~i~L~~~~v~~~~~~-~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 191 (210)
+.||++|-.+.|.++.-... .--.|.+++.|..|...++. ...+.|+|..+.- ..+.
T Consensus 326 ~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~iV~klEdte~~~nafeis~~ti-------------------~rIv 386 (661)
T KOG2070|consen 326 KDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKLEDTENHRNAFEISGSTI-------------------ERIV 386 (661)
T ss_pred hhheeeeccceeeeeEeccccchhhhccccccceeEEeehhhhhcccccccccccch-------------------hhee
Confidence 58999999998888875543 12346788888888776654 4456777754421 2456
Q ss_pred EEcCCHHHHHHHHHHHhc
Q psy17820 192 MSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 192 l~a~s~~e~~~Wi~al~~ 209 (210)
..|..+.+..+|+++++.
T Consensus 387 ~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 387 VSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred eccCChHHHHHHHHHhhh
Confidence 778999999999999973
No 154
>KOG0521|consensus
Probab=88.09 E-value=0.17 Score=46.40 Aligned_cols=74 Identities=26% Similarity=0.430 Sum_probs=51.2
Q ss_pred CCCCeeeEEEeeCC-CCCCceeEEEEEeCCEEEEEeecCCccccc---ccCCcceec--------------ccceeEEEe
Q psy17820 5 FNPDKEGWLWKQGG-RYKSWKRRWFILNDKCLYYFEYTTDKSACL---IENSSGRYK--------------SWKRRWFIL 66 (210)
Q Consensus 5 ~~~~~~G~L~K~g~-~~~~wkrRwfvL~~~~L~Yy~~~~~~~~~~---i~~~~~~~~--------------~~~~~~~~~ 66 (210)
......|+|.|+.+ ..+.|+||||-..++.|.|+..-.+...+. +..+.++.. ++.....++
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~lQA 351 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLLQA 351 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccchhccccCCcccccceeeEEEecCCcceEEec
Confidence 44567799999888 489999999999999999999887766332 344444322 233334556
Q ss_pred chh--HHHHHHhhh
Q psy17820 67 NDK--CLYYFEYTT 78 (210)
Q Consensus 67 ~~~--~~~~~~~i~ 78 (210)
+++ .++|+.++.
T Consensus 352 es~~d~~~Wi~~i~ 365 (785)
T KOG0521|consen 352 ESEKDCQDWISALQ 365 (785)
T ss_pred CchhHHHHHHHHHH
Confidence 554 667777664
No 155
>KOG3723|consensus
Probab=87.29 E-value=0.45 Score=41.53 Aligned_cols=48 Identities=33% Similarity=0.508 Sum_probs=31.7
Q ss_pred CCeeeEEEee-CC--CCCCceeEEEEEeCCEEEEEe--ecCCcccccccCCcc
Q psy17820 7 PDKEGWLWKQ-GG--RYKSWKRRWFILNDKCLYYFE--YTTDKSACLIENSSG 54 (210)
Q Consensus 7 ~~~~G~L~K~-g~--~~~~wkrRwfvL~~~~L~Yy~--~~~~~~~~~i~~~~~ 54 (210)
+..+|=|.-+ |+ ..+.|+-|||.|.+..|.|-+ +.+|...+.|+...|
T Consensus 735 p~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~~~IDl~~I 787 (851)
T KOG3723|consen 735 PLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDDCPIDLSKI 787 (851)
T ss_pred chhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCCCCccHHHh
Confidence 3455555433 33 368999999999999999977 334444566654433
No 156
>KOG3531|consensus
Probab=85.69 E-value=0.25 Score=44.86 Aligned_cols=40 Identities=18% Similarity=0.659 Sum_probs=34.3
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeecCCccc
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKSA 46 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~~~~~~ 46 (210)
...+|||..+-.....|+|=|+|+++-+|++||+..|..+
T Consensus 924 ~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~~ 963 (1036)
T KOG3531|consen 924 NQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSEP 963 (1036)
T ss_pred hhhhHHHHHHhhccccceeeeeeecceeeEeecccccccc
Confidence 3567888877777779999999999999999999988764
No 157
>KOG3543|consensus
Probab=85.51 E-value=0.18 Score=44.38 Aligned_cols=27 Identities=37% Similarity=0.877 Sum_probs=22.7
Q ss_pred CCCeeeEEEeeCC-CCCCceeEEEEEeC
Q psy17820 6 NPDKEGWLWKQGG-RYKSWKRRWFILND 32 (210)
Q Consensus 6 ~~~~~G~L~K~g~-~~~~wkrRwfvL~~ 32 (210)
|--.+|||+-.|. .++.||+|||||-.
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvq 490 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQ 490 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEE
Confidence 4457899999998 57999999999953
No 158
>KOG4407|consensus
Probab=85.20 E-value=0.039 Score=51.99 Aligned_cols=96 Identities=16% Similarity=0.232 Sum_probs=65.1
Q ss_pred cccCCcceeeEEee------c----CccCCeeEEEEEEeCCEEEEeccCCCC--------------CceeEEEeCCeEEE
Q psy17820 95 TFFNPDKEGWLWKQ------G----GRYKSWKRRWFILNDKCLYYFEYTTDK--------------EPRGIIPLENIQVR 150 (210)
Q Consensus 95 ~~~~~~~~G~L~k~------~----~~~~~wk~r~fvL~~~~L~yy~~~~~~--------------~~~~~i~L~~~~v~ 150 (210)
.+.+..++|||+.+ | .....|+..|.+|.+..|+.+++.... ..-..+.+.+|-+.
T Consensus 919 ~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltd 998 (1973)
T KOG4407|consen 919 LFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTD 998 (1973)
T ss_pred hhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhh
Confidence 34677899999754 2 235589999999999999999876431 11222444444433
Q ss_pred E-ecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 151 E-VHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 151 ~-~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
. ..+.++.+.|+|...+. -.+.|++++.++|-.|+...++
T Consensus 999 I~ysetkrn~vfRLTt~d~-------------------ce~lfqaeDrddmlgG~~ttq~ 1039 (1973)
T KOG4407|consen 999 IQYSETKRNQVFRLTTNDL-------------------CEGLFQAEDRDDMLGGLSTTQS 1039 (1973)
T ss_pred hhhhhhhhhhHHHhHHHHH-------------------HhHhhccCccccccchhhhhhh
Confidence 3 22335667777766542 4678999999999999987754
No 159
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=82.29 E-value=4 Score=27.88 Aligned_cols=22 Identities=14% Similarity=0.389 Sum_probs=19.9
Q ss_pred eEEEEEcCCHHHHHHHHHHHhc
Q psy17820 188 TVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 188 r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
..+.|.|+|..+.+.|++.|+.
T Consensus 80 G~vEfec~~~~~~k~W~~gI~~ 101 (110)
T PF08458_consen 80 GVVEFECDSQREYKRWVQGIQH 101 (110)
T ss_pred cEEEEEeCChhhHHHHHHHHHH
Confidence 5899999999999999999863
No 160
>KOG1170|consensus
Probab=80.66 E-value=0.042 Score=49.35 Aligned_cols=88 Identities=17% Similarity=0.220 Sum_probs=54.3
Q ss_pred eeeEEeecCccCCeeEEEEEEeCCEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCCCc
Q psy17820 102 EGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGK 181 (210)
Q Consensus 102 ~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 181 (210)
.|-..+.......|+.+++.+++..-.++...........+++....+.+......++.|.++++
T Consensus 5 rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g~~~~~~d~t~a~~~eSs~~n~~~sf~vi~~--------------- 69 (1099)
T KOG1170|consen 5 RGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASGPLFALLDLTSAHVAESSTNNPRPSFCVITP--------------- 69 (1099)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHhcccccccccccCCCCCCeeEecc---------------
Confidence 44444444444578888888877663333322121122234444555554444445566777766
Q ss_pred eeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 182 VVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 182 ~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.|...++|++..+|+.|+.+++.
T Consensus 70 -----~rk~r~~adn~ke~e~wi~~~kt 92 (1099)
T KOG1170|consen 70 -----VRKHRLCADNRKEMEKWINQSKT 92 (1099)
T ss_pred -----cHHhhhhccchhHHHHhhccccc
Confidence 36899999999999999999864
No 161
>KOG1264|consensus
Probab=78.39 E-value=3 Score=38.30 Aligned_cols=37 Identities=30% Similarity=0.512 Sum_probs=33.2
Q ss_pred CCCCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeec
Q psy17820 5 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYT 41 (210)
Q Consensus 5 ~~~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~ 41 (210)
.|+.|+|-|+-+-.....|-+-+|||.+..|+|-..-
T Consensus 473 ~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~ 509 (1267)
T KOG1264|consen 473 KNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEI 509 (1267)
T ss_pred hhhhhcceEEEecCCCCceeeeEEEEecceeEeehhc
Confidence 4668999999999999999999999999999998744
No 162
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=71.28 E-value=12 Score=25.59 Aligned_cols=35 Identities=14% Similarity=-0.067 Sum_probs=28.0
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeCCEEEEEeec
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYT 41 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~~~L~Yy~~~ 41 (210)
-.++|=|.+.+...+.=+.|.|-|-|++|.|.|..
T Consensus 2 li~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd 36 (109)
T cd01224 2 LFLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKD 36 (109)
T ss_pred ceEeeeEEEEecccCCcccEEEEEecceEEEEecc
Confidence 35789999988643334789999999999999965
No 163
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=70.93 E-value=10 Score=26.38 Aligned_cols=32 Identities=25% Similarity=0.540 Sum_probs=24.1
Q ss_pred eeEEEeeCCCC-----CCceeEEEEEeC--CEEEEEeec
Q psy17820 10 EGWLWKQGGRY-----KSWKRRWFILND--KCLYYFEYT 41 (210)
Q Consensus 10 ~G~L~K~g~~~-----~~wkrRwfvL~~--~~L~Yy~~~ 41 (210)
-.||+|-++.. +..++|||-|+. .+|++...+
T Consensus 12 G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~ 50 (123)
T PF12814_consen 12 GEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSN 50 (123)
T ss_pred ccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCC
Confidence 36899977644 577999999974 588887744
No 164
>KOG3551|consensus
Probab=66.24 E-value=9.2 Score=32.11 Aligned_cols=53 Identities=19% Similarity=0.339 Sum_probs=36.4
Q ss_pred eeEEEeCCeEEEE--ecCCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 139 RGIIPLENIQVRE--VHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 139 ~~~i~L~~~~v~~--~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
...|+|.-+-+.. .......-+|+|-++++ ..++.|+|.+..+...|..||..
T Consensus 215 ~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg------------------~~tliLR~kdsa~A~~Wf~AiHa 269 (506)
T KOG3551|consen 215 RKTIPLKMAYVARNLIDADPENRQLEIHSPDG------------------RHTLILRAKDSAEADSWFEAIHA 269 (506)
T ss_pred ccccchhhHHHHhhCCCCCcccceeeeeCCCC------------------cceEEEEccCcHHHHHHHHHHHH
Confidence 3456666443322 12222345899988876 24899999999999999999974
No 165
>KOG0705|consensus
Probab=64.55 E-value=1.6 Score=38.27 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=29.0
Q ss_pred cCCcceeeEEeecCc--cCCeeEEEEEEe-CCEEEEeccC
Q psy17820 97 FNPDKEGWLWKQGGR--YKSWKRRWFILN-DKCLYYFEYT 133 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~--~~~wk~r~fvL~-~~~L~yy~~~ 133 (210)
.-|+++|.|.|+.+. .+.||+.|..|. ++.|.|+.+-
T Consensus 300 AIPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL 339 (749)
T KOG0705|consen 300 AIPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSL 339 (749)
T ss_pred ccchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccH
Confidence 457899999998753 379999999994 6678888753
No 166
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=64.18 E-value=5.8 Score=22.86 Aligned_cols=20 Identities=20% Similarity=0.851 Sum_probs=17.7
Q ss_pred CCCceeEEEEEeCCEEEEEe
Q psy17820 20 YKSWKRRWFILNDKCLYYFE 39 (210)
Q Consensus 20 ~~~wkrRwfvL~~~~L~Yy~ 39 (210)
.+.|.++|+.+.|..|.-|+
T Consensus 27 Vr~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 27 VRKWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHHHhhceEEeccceEEEEE
Confidence 35799999999999999887
No 167
>KOG2996|consensus
Probab=62.02 E-value=25 Score=31.34 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=61.5
Q ss_pred cCCcceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC-CCceeEEEeCCeEEEEecCC-----C-----CcceEEEEe
Q psy17820 97 FNPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD-KEPRGIIPLENIQVREVHDR-----H-----KPHCFELFT 165 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~-~~~~~~i~L~~~~v~~~~~~-----~-----~~~~f~i~~ 165 (210)
..|...|-|....-...+-+.||..|-+..+...+...+ ......|.|....+...+.. + ..+.|-|+.
T Consensus 404 GRpkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG~sy~lke~i~l~~y~m~d~~~~~kd~kk~~~~~ws~~f~lI~ 483 (865)
T KOG2996|consen 404 GRPKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKGDSYELKEIIYLNAYKMSDDPIDDKDNKKVSTITWSYGFYLIH 483 (865)
T ss_pred CCCCcCceEEEeehhcCCccceEEeEecceEEEeeccCcchhHHHHHHHHhhccccCCCCchhhhhccceeeeeeEEEEE
Confidence 567778888776644445588999998888888776544 23444455554444332211 1 346677765
Q ss_pred CCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 166 SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
..+ ...+.|.+.+++-...|+.++.
T Consensus 484 tqg------------------~ngl~fy~Kte~~kkkWmeqfe 508 (865)
T KOG2996|consen 484 TQG------------------RNGLEFYCKTEDLKKKWMEQFE 508 (865)
T ss_pred EcC------------------CcceEEEEecHHHHHHHHHHHH
Confidence 543 2467888899999999999874
No 168
>KOG0517|consensus
Probab=60.97 E-value=0.28 Score=48.13 Aligned_cols=90 Identities=23% Similarity=0.417 Sum_probs=60.0
Q ss_pred cceeeEEeec--------CccCCeeEEEEEEeCCEEEEeccCCCCCc------eeEEEeC--CeEEEE-ecCCCCcceEE
Q psy17820 100 DKEGWLWKQG--------GRYKSWKRRWFILNDKCLYYFEYTTDKEP------RGIIPLE--NIQVRE-VHDRHKPHCFE 162 (210)
Q Consensus 100 ~~~G~L~k~~--------~~~~~wk~r~fvL~~~~L~yy~~~~~~~~------~~~i~L~--~~~v~~-~~~~~~~~~f~ 162 (210)
.++|+|+.+- ..+.+|...||++..+.+.+|++...... .+..+|+ .+.+.. ++..++++.|.
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~dy~kkk~v~~ 2379 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVASDYHKKKHVFL 2379 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchhHHHHHHHHHHHhHhhh
Confidence 3578887652 13558999999999999999987654221 1222222 222211 12335677888
Q ss_pred EEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHh
Q psy17820 163 LFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLS 208 (210)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~ 208 (210)
+..+.+ ..|.|+|.++++|+.|+.++.
T Consensus 2380 l~~~~g-------------------ae~llq~k~ee~m~sWL~~~a 2406 (2473)
T KOG0517|consen 2380 LQLPPG-------------------AEHLLQAKDEEEMESWLRALA 2406 (2473)
T ss_pred hcCCch-------------------HHHHHhhccHHHHHHHHHHHH
Confidence 776653 689999999999999998875
No 169
>KOG1264|consensus
Probab=60.79 E-value=14 Score=34.20 Aligned_cols=53 Identities=25% Similarity=0.303 Sum_probs=34.6
Q ss_pred eEEEeCCeEEEEecCC--CCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 140 GIIPLENIQVREVHDR--HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 140 ~~i~L~~~~v~~~~~~--~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
|..++..+.|...+.. .+.+.|.|..... ....+.|.|++.+|..+|+.+|+.
T Consensus 854 gi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~-----------------~~~~~~~aadsqEe~~eW~k~i~E 908 (1267)
T KOG1264|consen 854 GILDLNTYNVVKAPQGKNQKSFVFILEPKWQ-----------------GKPPVEFAADSQEELFEWFKSIRE 908 (1267)
T ss_pred ccccccccceeecccccCCcceEEEechhhh-----------------cCCceEEecCchHHHHHHHHHHHH
Confidence 3445555555544433 3455666543321 235899999999999999999974
No 170
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=55.14 E-value=57 Score=21.36 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=32.2
Q ss_pred eEEEeCCeEEEEec-CCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 140 GIIPLENIQVREVH-DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 140 ~~i~L~~~~v~~~~-~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
..-+|......... +......|.|... +.|+..|+|..|+...|..|-+
T Consensus 37 ktW~L~eL~~I~~~~~~~~~~~F~l~~~---------------------k~y~W~a~s~~Ek~~Fi~~L~k 86 (91)
T PF15277_consen 37 KTWDLDELKAIDGINPDKDTPEFDLTFD---------------------KPYYWEASSAKEKNTFIRSLWK 86 (91)
T ss_dssp EEEEGGG--EEEE-SSS--TTEEEEESS---------------------SEEEEEESSHHHHHHHHHHHHH
T ss_pred eEEehhhceeeeeecCCCCCcCEEEEEC---------------------CCcEEEeCCHHHHHHHHHHHHH
Confidence 34667776554443 3333457887654 5999999999999999998753
No 171
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=52.30 E-value=12 Score=30.92 Aligned_cols=25 Identities=36% Similarity=0.567 Sum_probs=18.0
Q ss_pred CcceeeEEeecC----c-c-CCeeEEEEEEe
Q psy17820 99 PDKEGWLWKQGG----R-Y-KSWKRRWFILN 123 (210)
Q Consensus 99 ~~~~G~L~k~~~----~-~-~~wk~r~fvL~ 123 (210)
..++|+|.|+.. . . ..||+|||.|.
T Consensus 303 ~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 303 TVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred hhhhhHhhhccccCCCCcccccccceeeecC
Confidence 467999988752 1 2 26999999873
No 172
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=51.79 E-value=8.3 Score=31.65 Aligned_cols=27 Identities=33% Similarity=0.484 Sum_probs=19.7
Q ss_pred cCCcceeeEEeecC-----ccCCeeEEEEEEe
Q psy17820 97 FNPDKEGWLWKQGG-----RYKSWKRRWFILN 123 (210)
Q Consensus 97 ~~~~~~G~L~k~~~-----~~~~wk~r~fvL~ 123 (210)
....++|++.++.. +.+.||+|||.|.
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 34578999888652 2447999999873
No 173
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=49.41 E-value=3.7 Score=33.54 Aligned_cols=26 Identities=38% Similarity=0.676 Sum_probs=19.7
Q ss_pred CCcceeeEEeecC-----ccCCeeEEEEEEe
Q psy17820 98 NPDKEGWLWKQGG-----RYKSWKRRWFILN 123 (210)
Q Consensus 98 ~~~~~G~L~k~~~-----~~~~wk~r~fvL~ 123 (210)
-..++|+|.|+.. +.+.||+|||.|.
T Consensus 282 ~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~ 312 (313)
T cd05394 282 VHLKEGEMYKRAQGRTRIGKKNFKKRWFCLT 312 (313)
T ss_pred hhhHHHHHHhhccCCCccccccchhheeecC
Confidence 3468999998752 2457999999985
No 174
>KOG3520|consensus
Probab=46.61 E-value=16 Score=35.03 Aligned_cols=22 Identities=23% Similarity=0.616 Sum_probs=20.3
Q ss_pred eEEEEEcCCHHHHHHHHHHHhc
Q psy17820 188 TVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 188 r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.-|.|.|.|..|+..|+..|+.
T Consensus 698 qmYEL~a~T~serntW~~li~~ 719 (1167)
T KOG3520|consen 698 EMYELVAQSKSERNTWIQLIQD 719 (1167)
T ss_pred eeEEEecCCHHHHHHHHHHHHH
Confidence 5899999999999999999975
No 175
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=44.00 E-value=6.3 Score=32.22 Aligned_cols=27 Identities=37% Similarity=0.688 Sum_probs=19.3
Q ss_pred CCcceeeEEeec--C---ccCCeeEEEEEEeC
Q psy17820 98 NPDKEGWLWKQG--G---RYKSWKRRWFILND 124 (210)
Q Consensus 98 ~~~~~G~L~k~~--~---~~~~wk~r~fvL~~ 124 (210)
...++|.|.|+. + +.+.||+|||.|.+
T Consensus 279 ~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 279 ILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred chhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 346899999853 2 23479999999863
No 176
>KOG0592|consensus
Probab=43.60 E-value=27 Score=30.94 Aligned_cols=82 Identities=24% Similarity=0.430 Sum_probs=47.7
Q ss_pred ceeeEEeecCccCCeeEEEEEEeC-CEEEEeccCCCCCceeEEEeCCeEEEEecCCCCcceEEEEeCCceeeeeeecCCC
Q psy17820 101 KEGWLWKQGGRYKSWKRRWFILND-KCLYYFEYTTDKEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSE 179 (210)
Q Consensus 101 ~~G~L~k~~~~~~~wk~r~fvL~~-~~L~yy~~~~~~~~~~~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 179 (210)
+.|.|.++.+... ++|.++|.. ..|.|+. +......+.|++..+...+. .....|.|-++
T Consensus 453 k~~~l~k~~~lf~--rkr~lllTn~~rll~~~-~~~~~lk~eip~~~~~~~e~---~n~~~~~i~TP------------- 513 (604)
T KOG0592|consen 453 KEGALEKRQGLFA--RKRMLLLTNGPRLLYVD-PQNLVLKGEIPWSPDLRVEL---KNSSTFFIHTP------------- 513 (604)
T ss_pred hHHHHHhhhhhhh--ceeEEEecCCCeEEEEe-cccceeccccccCcccceee---ccCcceEEECC-------------
Confidence 4566666544333 678888865 4666665 44555677777775322222 12234555544
Q ss_pred CceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 180 GKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 180 ~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.++|+|- +-+.....|-.||..
T Consensus 514 -------~k~~~l~-d~~~~as~w~~ai~~ 535 (604)
T KOG0592|consen 514 -------NKVYYLE-DPEQRASVWCKAIET 535 (604)
T ss_pred -------ccceecc-CcccchhHHHHhhhh
Confidence 4677775 355566778888753
No 177
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=42.74 E-value=1.5e+02 Score=22.42 Aligned_cols=54 Identities=20% Similarity=0.211 Sum_probs=35.8
Q ss_pred CCcceeeEEeecCccCCeeEEEEEEeCCEEEEec-----cCCCCCceeEEEeCCeEEEEe
Q psy17820 98 NPDKEGWLWKQGGRYKSWKRRWFILNDKCLYYFE-----YTTDKEPRGIIPLENIQVREV 152 (210)
Q Consensus 98 ~~~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~-----~~~~~~~~~~i~L~~~~v~~~ 152 (210)
.+..+....|-.. ...-.+|.++|.+..+|... +.........|+|..++-..+
T Consensus 49 ~vlFs~~v~K~nr-~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I~~Isv 107 (199)
T PF06017_consen 49 KVLFSDRVQKYNR-RNKPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDITGISV 107 (199)
T ss_pred ceEEEEEEEEecC-CCCccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccccEEEE
Confidence 3445666777665 33457899999999999885 444445667788877553333
No 178
>KOG4095|consensus
Probab=40.44 E-value=15 Score=26.47 Aligned_cols=20 Identities=20% Similarity=0.846 Sum_probs=18.4
Q ss_pred CCCceeEEEEEeCCEEEEEe
Q psy17820 20 YKSWKRRWFILNDKCLYYFE 39 (210)
Q Consensus 20 ~~~wkrRwfvL~~~~L~Yy~ 39 (210)
.+.|-++|+.+.|..|.-||
T Consensus 28 VRrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 28 VRRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHHhhheEeecccceEEEE
Confidence 46899999999999999998
No 179
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=39.41 E-value=28 Score=30.36 Aligned_cols=25 Identities=32% Similarity=0.563 Sum_probs=20.2
Q ss_pred CCeeeEEEeeCCCCCCceeEEEEEeC
Q psy17820 7 PDKEGWLWKQGGRYKSWKRRWFILND 32 (210)
Q Consensus 7 ~~~~G~L~K~g~~~~~wkrRwfvL~~ 32 (210)
...+|.+.|+++... ||+||+++++
T Consensus 373 ~~~~g~~~~~~~~~~-w~~~~~~~~~ 397 (496)
T PTZ00283 373 TLYEGIVKKQSSDLS-WKRRYLCIRG 397 (496)
T ss_pred eeeeeEEecccCCcc-cceeEEEEee
Confidence 367799999877654 9999999974
No 180
>KOG4047|consensus
Probab=36.81 E-value=30 Score=29.64 Aligned_cols=93 Identities=15% Similarity=0.059 Sum_probs=0.0
Q ss_pred cCCcceeeEEeecCccC--CeeEEEEEEeCCEEEEeccCCCCC-------------ceeEEEeCCeEEEEecCC--CCcc
Q psy17820 97 FNPDKEGWLWKQGGRYK--SWKRRWFILNDKCLYYFEYTTDKE-------------PRGIIPLENIQVREVHDR--HKPH 159 (210)
Q Consensus 97 ~~~~~~G~L~k~~~~~~--~wk~r~fvL~~~~L~yy~~~~~~~-------------~~~~i~L~~~~v~~~~~~--~~~~ 159 (210)
..+.+.|++..+..+++ .|.++|++|..+...--.....-. ....+.|.++.-...... .++-
T Consensus 6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~ 85 (429)
T KOG4047|consen 6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG 85 (429)
T ss_pred CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Q ss_pred eEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 160 CFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 160 ~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.+.....+. .. +|-++++-+...|+.+|..
T Consensus 86 i~~~f~~~a-------------------~e-~~~~~q~l~~~~w~~~i~~ 115 (429)
T KOG4047|consen 86 ITAFFCDRA-------------------EE-LFNMLQDLMQANWINAIEE 115 (429)
T ss_pred ceEEEecch-------------------HH-HHHHHHHHHhhhhhhhhhh
No 181
>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C.
Probab=33.26 E-value=1.5e+02 Score=19.65 Aligned_cols=51 Identities=20% Similarity=0.192 Sum_probs=31.0
Q ss_pred CceeEEEeCCeEEEEec-CCCCcceEEEEeCCceeeeeeecCCCCceeeecceEEEEEcCCHHHHHHHHHH
Q psy17820 137 EPRGIIPLENIQVREVH-DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKC 206 (210)
Q Consensus 137 ~~~~~i~L~~~~v~~~~-~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~a 206 (210)
.....+++..+....-. ---++..++|...++ ++++|..++.+++++=+.+
T Consensus 53 ~~~~~w~~~~I~~v~~RRyllr~~AlEiF~~dg-------------------~s~f~~F~~~~~R~~v~~~ 104 (106)
T PF14844_consen 53 PKSKRWPLSDIKEVHKRRYLLRDTALEIFFSDG-------------------RSYFFNFESKKERDEVYNK 104 (106)
T ss_dssp -TCEEEEGGGEEEEEEEEETTEEEEEEEEETTS--------------------EEEEE-SSHHHHHHHHCC
T ss_pred CceEEEEHHHhHHHHHHHhcCcceEEEEEEcCC-------------------cEEEEEcCCHHHHHHHHHh
Confidence 34556777765433211 113456788887764 7999999999999865443
No 182
>KOG1451|consensus
Probab=32.72 E-value=37 Score=30.32 Aligned_cols=30 Identities=27% Similarity=0.435 Sum_probs=24.9
Q ss_pred CCCCCeeeEEEeeCC--CCCCceeEEEEEeCC
Q psy17820 4 FFNPDKEGWLWKQGG--RYKSWKRRWFILNDK 33 (210)
Q Consensus 4 ~~~~~~~G~L~K~g~--~~~~wkrRwfvL~~~ 33 (210)
-.++.++|||+-|.. ..+.|-+.||+....
T Consensus 262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~re 293 (812)
T KOG1451|consen 262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRE 293 (812)
T ss_pred CCCcccceeeeehhhhhccchhhhheeEeecc
Confidence 467899999999876 567999999999654
No 183
>PF06627 DUF1153: Protein of unknown function (DUF1153); InterPro: IPR009534 This family consists of several short, hypothetical bacterial proteins of unknown function.; PDB: 2OA4_A 2JRT_A.
Probab=32.51 E-value=31 Score=22.54 Aligned_cols=17 Identities=24% Similarity=0.573 Sum_probs=13.3
Q ss_pred cCCHHHHHHHHHHHhcC
Q psy17820 194 AATAEEKDEWIKCLSLH 210 (210)
Q Consensus 194 a~s~~e~~~Wi~al~~~ 210 (210)
.=|.+|..+|..++.+|
T Consensus 60 ~Ls~eEf~~W~~av~rh 76 (90)
T PF06627_consen 60 GLSEEEFESWQRAVDRH 76 (90)
T ss_dssp TSSHHHHHHHHHHCCT-
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 34899999999988764
No 184
>PHA03001 putative virion core protein; Provisional
Probab=27.40 E-value=75 Score=22.32 Aligned_cols=18 Identities=22% Similarity=0.744 Sum_probs=15.3
Q ss_pred EEEEeCCEEEEEeecCCc
Q psy17820 27 WFILNDKCLYYFEYTTDK 44 (210)
Q Consensus 27 wfvL~~~~L~Yy~~~~~~ 44 (210)
|.|++++.|.||+-++.+
T Consensus 55 ylvvrd~diFyfkcdkG~ 72 (132)
T PHA03001 55 YLVVKDKDIFYFKCDKGS 72 (132)
T ss_pred EEEEecCcEEEEEecCCe
Confidence 788899999999977654
No 185
>PF10453 NUFIP1: Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1); InterPro: IPR019496 Nuclear fragile X mental retardation-interacting protein 1 (Nufip1) has been implicated in the assembly of the large subunit of the ribosome [] and in telomere maintenance []. It is known to bind RNA [] and is phosphorylated upon DNA damage []. This entry represents a conserved domain found within Nufip1. Some proteins containing this region also contain a CCCH zinc finger.
Probab=21.60 E-value=1.3e+02 Score=17.81 Aligned_cols=17 Identities=35% Similarity=0.614 Sum_probs=13.3
Q ss_pred eEEEEEcCCHHHHHHHHHH
Q psy17820 188 TVYRMSAATAEEKDEWIKC 206 (210)
Q Consensus 188 r~~~l~a~s~~e~~~Wi~a 206 (210)
+.+.| +|++|...|+..
T Consensus 13 ~~~~L--~t~eeI~~W~eE 29 (56)
T PF10453_consen 13 TSIKL--QTPEEIAKWIEE 29 (56)
T ss_pred ceeec--CCHHHHHHHHHH
Confidence 45555 699999999975
No 186
>KOG3521|consensus
Probab=21.15 E-value=67 Score=29.24 Aligned_cols=94 Identities=18% Similarity=0.155 Sum_probs=53.4
Q ss_pred cceeeEEeecCccCCeeEEEEEEeCCEEEEeccCCC-CCceeEEE--eCCeEEEEecCCCCcceEEEEeCCceeeeeeec
Q psy17820 100 DKEGWLWKQGGRYKSWKRRWFILNDKCLYYFEYTTD-KEPRGIIP--LENIQVREVHDRHKPHCFELFTSGFEFIKACKT 176 (210)
Q Consensus 100 ~~~G~L~k~~~~~~~wk~r~fvL~~~~L~yy~~~~~-~~~~~~i~--L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~ 176 (210)
..+|=|..+.++ .+-...+|.|--+.|.+.+..+. .....+|. |---.+.+ ..-..++.|-++.-+. |+|-
T Consensus 428 lleGdlrmKegk-~sK~DVhcfLfTDllLVcK~v~k~~drlKVIRpPll~dklv~-q~~~dpnsf~lVhLtE---Fh~a- 501 (846)
T KOG3521|consen 428 LLEGDLRMKEGK-GSKADVHCFLFTDLLLVCKKVQKKADRLKVIRPPLLMDKLVC-QYLRDPNSFLLVHLTE---FHTA- 501 (846)
T ss_pred hhccceecccCC-CcccceeeeeehhHHHHhHHHhhhcccceeeccchhhcceee-eecCCCCceEEEeech---hhhh-
Confidence 457777766543 23367788886666666554433 22222221 11111111 1123456777766543 2221
Q ss_pred CCCCceeeecceEEEEEcCCHHHHHHHHHHHhc
Q psy17820 177 DSEGKVVEGKHTVYRMSAATAEEKDEWIKCLSL 209 (210)
Q Consensus 177 ~~~~~~~~~~~r~~~l~a~s~~e~~~Wi~al~~ 209 (210)
.-.|.+.|...++...|.++|+.
T Consensus 502 ----------~~ayt~hcs~p~d~~~W~D~l~~ 524 (846)
T KOG3521|consen 502 ----------QAAYTMHCSGPEDTLRWTDMLKM 524 (846)
T ss_pred ----------hhhheeecCChhhHHHHHHHHHH
Confidence 24789999999999999999874
Done!