Query psy17821
Match_columns 194
No_of_seqs 174 out of 1434
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 23:54:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.3E-36 4.4E-41 244.1 11.0 132 20-151 14-179 (179)
2 1a58_A Cyclophilin; isomerase, 100.0 1.9E-36 6.5E-41 242.7 11.0 132 20-152 11-177 (177)
3 2ok3_A Peptidyl-prolyl CIS-tra 100.0 3.5E-36 1.2E-40 237.8 10.6 123 24-160 4-161 (161)
4 2he9_A NK-tumor recognition pr 100.0 3.5E-36 1.2E-40 243.9 10.5 133 19-152 23-190 (192)
5 2igv_A Peptidyl-prolyl CIS-tra 100.0 5.4E-36 1.8E-40 239.3 11.2 130 21-152 9-172 (173)
6 2poe_A Cyclophilin-like protei 100.0 4.7E-36 1.6E-40 241.9 10.5 135 12-161 9-181 (185)
7 1mzw_A Cyclophilin H, U-snRNP- 100.0 5.1E-36 1.7E-40 240.2 9.4 129 20-151 15-177 (177)
8 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.2E-35 4.2E-40 236.6 11.4 129 20-151 8-170 (170)
9 3ich_A Peptidyl-prolyl CIS-tra 100.0 1E-35 3.5E-40 240.5 10.5 131 20-160 20-185 (188)
10 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.4E-35 4.8E-40 242.0 10.3 130 22-165 8-183 (201)
11 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.7E-35 5.8E-40 238.8 10.5 129 20-150 24-186 (186)
12 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.7E-35 5.8E-40 240.6 10.4 131 22-166 21-186 (197)
13 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.4E-35 8.2E-40 235.3 11.0 137 1-152 1-172 (172)
14 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.7E-35 1.3E-39 234.4 10.4 123 21-152 17-173 (173)
15 2fu0_A Cyclophilin, putative; 100.0 3.7E-35 1.3E-39 231.8 10.2 119 22-151 7-159 (160)
16 2haq_A Cyclophilin; rotamase, 100.0 3.1E-35 1.1E-39 234.6 9.7 123 19-151 15-172 (172)
17 4fru_A Cyclophilin B, peptidyl 100.0 5.9E-35 2E-39 235.5 11.4 126 20-153 17-176 (185)
18 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5E-35 1.7E-39 232.3 9.9 119 22-151 13-165 (166)
19 3pmp_A Cyclophilin A; peptidyl 100.0 6E-35 2.1E-39 231.3 10.2 123 20-152 7-164 (164)
20 2b71_A Cyclophilin-like protei 100.0 5.6E-35 1.9E-39 237.4 9.5 121 22-153 40-194 (196)
21 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.4E-34 4.6E-39 229.6 10.6 122 20-151 8-164 (165)
22 2a2n_A Peptidylprolyl isomeras 100.0 1.2E-34 4.1E-39 232.0 10.3 127 13-150 14-175 (176)
23 1z81_A Cyclophilin; structural 100.0 1.3E-34 4.3E-39 240.2 9.7 124 25-151 69-229 (229)
24 3rdd_A Peptidyl-prolyl CIS-tra 100.0 2.1E-34 7.2E-39 232.1 10.3 122 22-152 29-184 (184)
25 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2.6E-34 8.8E-39 234.5 7.6 122 22-154 13-168 (203)
26 3k2c_A Peptidyl-prolyl CIS-tra 100.0 7.3E-34 2.5E-38 230.5 10.1 124 20-152 32-191 (193)
27 2c3b_A Ppiase, cyclophilin; is 100.0 3.5E-34 1.2E-38 228.6 6.9 117 26-151 18-172 (172)
28 2ose_A Probable peptidyl-proly 100.0 1.4E-33 4.9E-38 234.8 8.9 134 20-153 19-208 (234)
29 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.4E-33 8.1E-38 227.1 9.8 135 15-151 19-191 (191)
30 2hq6_A Serologically defined c 100.0 2.7E-33 9.3E-38 225.7 9.8 123 23-160 27-185 (185)
31 3s6m_A Peptidyl-prolyl CIS-tra 100.0 3.4E-33 1.2E-37 221.8 9.1 118 23-151 6-167 (167)
32 1lop_A Cyclophilin A; rotamase 100.0 1.8E-33 6.2E-38 222.9 6.8 117 24-151 3-163 (164)
33 1v9t_A Cyclophilin B; beta bar 100.0 6.9E-33 2.3E-37 219.9 7.1 118 23-151 7-165 (166)
34 3bkp_A Cyclophilin; malaria, i 100.0 1.1E-32 3.9E-37 229.0 8.1 127 23-164 24-202 (232)
35 1ihg_A Cyclophilin 40; ppiase 100.0 4.2E-32 1.5E-36 237.5 10.6 132 20-153 20-186 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 99.9 6.7E-26 2.3E-30 198.8 5.6 91 29-131 187-345 (369)
37 1dyn_A Dynamin; signal transdu 98.2 3.5E-07 1.2E-11 68.6 2.0 71 4-86 46-119 (125)
38 1r8s_E ARNO; protein transport 97.3 1.9E-05 6.4E-10 63.9 -1.5 40 153-192 38-77 (203)
39 3ltl_A Brefeldin A-inhibited g 97.3 1.8E-05 6.3E-10 64.3 -1.7 41 153-193 44-84 (211)
40 2r09_A Cytohesin-3; autoinhibi 96.8 9.7E-05 3.3E-09 63.9 -2.2 39 154-192 41-79 (347)
41 1fgy_A GRP1; PH domain, signal 96.7 0.00093 3.2E-08 48.1 2.9 79 5-83 38-118 (127)
42 2dtc_A RAL guanine nucleotide 96.3 0.00076 2.6E-08 50.5 0.3 60 8-85 53-112 (126)
43 2r09_A Cytohesin-3; autoinhibi 96.2 0.002 6.7E-08 55.7 2.7 80 5-84 246-327 (347)
44 1xsz_A Guanine nucleotide exch 95.5 0.00093 3.2E-08 58.2 -2.6 37 157-193 39-76 (356)
45 1v88_A Oxysterol binding prote 95.2 0.0072 2.5E-07 44.9 1.8 79 5-83 40-122 (130)
46 1ku1_A ARF guanine-nucleotide 93.7 0.0071 2.4E-07 49.6 -1.3 34 157-192 54-88 (230)
47 2coc_A FYVE, rhogef and PH dom 91.8 0.044 1.5E-06 39.6 0.8 58 4-81 42-102 (112)
48 1wi1_A Calcium-dependent activ 91.7 0.048 1.6E-06 40.6 1.0 58 4-81 45-106 (126)
49 2d9y_A Pleckstrin homology dom 89.7 0.15 5.1E-06 35.7 2.1 61 5-84 45-108 (117)
50 1wgq_A FYVE, rhogef and PH dom 88.8 0.14 4.7E-06 35.6 1.3 61 5-84 41-102 (109)
51 2p0d_A RHO GTPase-activating p 88.2 0.13 4.3E-06 37.6 0.7 58 7-83 64-122 (129)
52 1v89_A Hypothetical protein KI 88.1 0.15 5.1E-06 35.6 1.1 66 5-82 41-109 (118)
53 2w2x_D 1-phosphatidylinositol- 87.8 0.15 5.1E-06 36.9 0.9 59 9-84 58-118 (124)
54 1wg7_A Dedicator of cytokinesi 86.4 0.22 7.6E-06 36.7 1.2 55 8-81 66-120 (150)
55 3cxb_B Pleckstrin homology dom 86.3 0.25 8.4E-06 35.1 1.4 61 4-84 36-100 (112)
56 1x1f_A Signal-transducing adap 84.9 0.26 9E-06 37.3 1.0 58 4-81 50-109 (149)
57 1fao_A Dual adaptor of phospho 84.7 0.3 1E-05 34.7 1.2 57 5-81 51-108 (126)
58 1u5d_A SKAP55, SRC kinase-asso 84.0 1.2 4E-05 30.2 4.0 35 5-39 40-78 (108)
59 1v5u_A SBF1, SET binding facto 84.0 0.31 1.1E-05 34.0 0.9 60 5-84 43-110 (117)
60 2dhk_A TBC1 domain family memb 80.7 0.54 1.9E-05 33.3 1.2 56 5-81 45-100 (119)
61 2i5f_A Pleckstrin; PH domain, 78.7 2.3 7.9E-05 28.9 4.0 35 5-39 42-82 (109)
62 1x05_A Pleckstrin; PH domain, 76.3 3 0.0001 29.4 4.2 58 5-81 53-116 (129)
63 1v5p_A Pleckstrin homology dom 75.8 1.3 4.4E-05 32.2 2.0 56 6-81 57-116 (126)
64 3pp2_A RHO GTPase-activating p 75.7 0.83 2.8E-05 32.9 0.9 54 10-82 65-120 (124)
65 1pls_A Pleckstrin homology dom 74.3 2.8 9.7E-05 28.8 3.5 60 5-83 38-99 (113)
66 2dn6_A KIAA0640 protein; PH do 73.3 1.3 4.6E-05 30.4 1.5 56 5-80 41-98 (115)
67 4a6h_A Phosphatidylinositol 4, 73.1 3.4 0.00012 29.8 3.7 62 6-80 43-113 (120)
68 1u5e_A SRC-associated adaptor 72.9 1.5 5E-05 34.8 1.8 58 5-81 143-204 (211)
69 3rcp_A Pleckstrin homology dom 72.6 1.1 3.8E-05 30.4 0.9 55 9-84 38-92 (103)
70 2yry_A Pleckstrin homology dom 70.7 4.1 0.00014 28.2 3.6 33 5-37 56-91 (122)
71 1upq_A PEPP1; PH domain, phosp 70.7 4.4 0.00015 28.1 3.8 60 5-83 45-107 (123)
72 3a8p_A T-lymphoma invasion and 70.0 1.4 4.7E-05 36.3 1.1 58 7-83 64-122 (263)
73 4h8s_A DCC-interacting protein 68.6 1.5 5E-05 38.0 1.0 57 7-81 338-394 (407)
74 1u5f_A SRC-associated adaptor 67.6 5.6 0.00019 28.8 4.0 61 5-84 54-118 (148)
75 1eaz_A Tandem PH domain contai 66.5 1.6 5.5E-05 30.5 0.7 59 5-83 47-109 (125)
76 2rsg_A Collagen type IV alpha- 66.0 2.3 7.9E-05 28.3 1.4 52 7-80 38-89 (94)
77 1unq_A RAC-alpha serine/threon 66.0 0.21 7E-06 35.6 -4.3 61 5-81 42-106 (125)
78 1btk_A Bruton'S tyrosine kinas 65.4 0.97 3.3E-05 34.5 -0.7 19 6-24 46-64 (169)
79 2dkp_A Pleckstrin homology dom 64.7 6 0.00021 27.6 3.5 58 5-81 55-115 (128)
80 2q13_A DCC-interacting protein 64.3 2.3 7.8E-05 36.4 1.4 58 7-82 315-372 (385)
81 2cod_A Centaurin-delta 1; ARF 62.0 2.2 7.4E-05 29.6 0.6 56 5-83 42-97 (115)
82 1x1g_A Pleckstrin 2; PH domain 60.6 5.6 0.00019 27.8 2.7 57 7-82 56-121 (129)
83 3tfm_A Myosin X; split PH doma 58.1 3.1 0.00011 33.1 1.0 59 5-84 96-154 (228)
84 2y7b_A Actin-binding protein a 56.8 6.9 0.00024 27.5 2.7 68 7-81 45-124 (134)
85 2d9x_A Oxysterol binding prote 54.8 3.8 0.00013 28.7 0.9 52 9-81 49-100 (120)
86 2fjl_A 1-phosphatidylinositol- 52.0 3.9 0.00013 31.1 0.6 55 12-83 90-146 (150)
87 1qqg_A IRS-1, insulin receptor 51.1 2.6 8.8E-05 34.6 -0.6 53 9-81 55-108 (264)
88 2lul_A Tyrosine-protein kinase 50.4 4.8 0.00016 30.2 0.9 56 6-81 55-117 (164)
89 2ys3_A UNC-112-related protein 45.7 20 0.00068 26.7 3.7 29 9-37 51-80 (137)
90 3aj4_A Pleckstrin homology dom 41.8 3.8 0.00013 28.1 -0.9 18 5-22 39-56 (112)
91 3lju_X ARF-GAP with dual PH do 38.7 8.6 0.00029 33.2 0.8 59 4-82 302-369 (386)
92 2cof_A Protein KIAA1914; PH do 36.5 29 0.001 23.3 3.2 55 8-81 43-97 (107)
93 2d9v_A Pleckstrin homology dom 28.9 13 0.00043 26.4 0.2 58 5-81 42-110 (130)
94 3tca_A Amyloid beta A4 precurs 28.9 5.2 0.00018 32.3 -2.2 65 4-82 200-273 (291)
95 2j59_M RHO-GTPase activating p 28.7 12 0.00041 27.6 -0.0 56 9-84 52-110 (168)
96 3zy0_A Tumor protein P63; tran 24.1 13 0.00044 20.8 -0.4 13 182-194 1-13 (32)
97 2rlo_A Centaurin-gamma 1; spli 23.8 5.3 0.00018 28.3 -2.7 56 8-82 60-121 (128)
98 1v61_A RAC/CDC42 guanine nucle 23.3 31 0.0011 25.3 1.4 31 10-40 69-100 (132)
No 1
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.3e-36 Score=244.08 Aligned_cols=132 Identities=26% Similarity=0.347 Sum_probs=114.5
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+.+.+..++.|+|+||||++.+ ||++||+++..-....++..+|+++.|||++|+|||||+ +.|+|
T Consensus 14 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 93 (179)
T 2wfi_A 14 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIY 93 (179)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred EEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCccc
Confidence 4566678899999999999987 999999876211111234568999999999999999996 35787
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEE
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRV 145 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I 145 (194)
+ |+++|+|||||.++ +|||||+ ||++|||||+|++|||||++|++++++.+++|.++|+|
T Consensus 94 g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I 173 (179)
T 2wfi_A 94 GGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 173 (179)
T ss_dssp SSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEE
T ss_pred CCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEE
Confidence 6 78899999999998 8999999 68999999999999999999999999988999999999
Q ss_pred EEEeee
Q psy17821 146 VKCNEL 151 (194)
Q Consensus 146 ~~~g~~ 151 (194)
.+||++
T Consensus 174 ~~~G~l 179 (179)
T 2wfi_A 174 LSCGEL 179 (179)
T ss_dssp EEEEEC
T ss_pred EeCeeC
Confidence 999975
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.9e-36 Score=242.70 Aligned_cols=132 Identities=28% Similarity=0.372 Sum_probs=114.4
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCee-ecCcceeeecCccCccccCceeeec---------Cccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKV-VEGKHTVYRMSAATAEEKDEWIKYS---------EGKV 84 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~-v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si 84 (194)
+.+.+..++.|+|+||||.+.+ ||++||+++. |.. ..|+.++|+++.|||++|+|||||+ +.|+
T Consensus 11 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~-g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 89 (177)
T 1a58_A 11 LDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMA-GTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESI 89 (177)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTT-CBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCT
T ss_pred EEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCc-CcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcc
Confidence 4455567889999999999987 9999999862 211 1245568999999999999999996 3578
Q ss_pred cc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceE
Q psy17821 85 VE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVR 144 (194)
Q Consensus 85 ~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~ 144 (194)
|+ |+.+|+|||||.++ +|||||+ ||++|+|||+|++|||||++|++++++.+++|.++|+
T Consensus 90 ~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~ 169 (177)
T 1a58_A 90 YGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVV 169 (177)
T ss_dssp TSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred cCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeE
Confidence 76 77899999999998 8999999 6899999999999999999999999998899999999
Q ss_pred EEEEeeec
Q psy17821 145 VVKCNELN 152 (194)
Q Consensus 145 I~~~g~~~ 152 (194)
|.+||++.
T Consensus 170 I~~~G~l~ 177 (177)
T 1a58_A 170 ILNCGELV 177 (177)
T ss_dssp EEEEEEEC
T ss_pred EEEeEEEC
Confidence 99999873
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=3.5e-36 Score=237.80 Aligned_cols=123 Identities=20% Similarity=0.274 Sum_probs=112.1
Q ss_pred eccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc----
Q psy17821 24 EVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE---- 86 (194)
Q Consensus 24 ~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g---- 86 (194)
.+.++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+|+
T Consensus 4 ~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~ 72 (161)
T 2ok3_A 4 TLHTDVGDIKIEVFCERTPKTCENFLALCASN-----------YYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFE 72 (161)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBC
T ss_pred EEEeCCccEEEEEcCCCCcHHHHHHHHHhhhc-----------ccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccc
Confidence 466889999999999987 999999988 9999999999999999996 357776
Q ss_pred --------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCC-CCCCcceEEEEE
Q psy17821 87 --------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKM-SRPLQDVRVVKC 148 (194)
Q Consensus 87 --------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~-~~P~~~i~I~~~ 148 (194)
|+.+|+|||||.++ +|||||+ ||++|+|||+|++||+||++|+++++++. ++|.++|+|.+|
T Consensus 73 dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~ 152 (161)
T 2ok3_A 73 DEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDI 152 (161)
T ss_dssp CCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEE
T ss_pred cccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEE
Confidence 67899999999998 8999999 68999999999999999999999999877 999999999999
Q ss_pred eeecCcCCCCch
Q psy17821 149 NELNNLLEPTEM 160 (194)
Q Consensus 149 g~~~~~l~p~~e 160 (194)
.++.+ ||++
T Consensus 153 ~i~~~---Pf~d 161 (161)
T 2ok3_A 153 TIHAN---PFAQ 161 (161)
T ss_dssp EEECC---SCC-
T ss_pred EEecC---CCCC
Confidence 99987 6653
No 4
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=243.89 Aligned_cols=133 Identities=29% Similarity=0.408 Sum_probs=116.0
Q ss_pred CceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCe-eecCcceeeecCccCccccCceeeec---------Ccc
Q psy17821 19 NIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGK-VVEGKHTVYRMSAATAEEKDEWIKYS---------EGK 83 (194)
Q Consensus 19 ~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~-~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~s 83 (194)
.+.+.+..++.|+|+||||++.+ ||++||+++. |. ...++..+|+++.|||++|+|||||+ +.|
T Consensus 23 f~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~-g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~s 101 (192)
T 2he9_A 23 HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEK-GLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGES 101 (192)
T ss_dssp EEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTT-CBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCC
T ss_pred EEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCC-CcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCc
Confidence 34566678899999999999987 9999998762 21 11235569999999999999999996 357
Q ss_pred ccc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcce
Q psy17821 84 VVE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDV 143 (194)
Q Consensus 84 i~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i 143 (194)
||+ |..+|+|||||.++ +|||||+ ||++|||||+|++|||||++|++++++.+++|.++|
T Consensus 102 iyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v 181 (192)
T 2he9_A 102 IYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADV 181 (192)
T ss_dssp TTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE
T ss_pred ccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCe
Confidence 876 77899999999998 8999999 689999999999999999999999999889999999
Q ss_pred EEEEEeeec
Q psy17821 144 RVVKCNELN 152 (194)
Q Consensus 144 ~I~~~g~~~ 152 (194)
+|.+||++.
T Consensus 182 ~I~~~g~l~ 190 (192)
T 2he9_A 182 RVIDCGVLA 190 (192)
T ss_dssp EEEEEEECC
T ss_pred EEEEeEEEc
Confidence 999999986
No 5
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=5.4e-36 Score=239.27 Aligned_cols=130 Identities=19% Similarity=0.241 Sum_probs=112.9
Q ss_pred eeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Cccccc
Q psy17821 21 QVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVVE 86 (194)
Q Consensus 21 ~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~g 86 (194)
.+.+-.++.|+|+||||.+.+ ||++||+++ +|....|+.++|+++.|||++|+|||||+ +.|||+
T Consensus 9 di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg 87 (173)
T 2igv_A 9 DITIGGKASGRIVMELYDDVVPKTAGNFRALCTGE-NGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYG 87 (173)
T ss_dssp EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTT-TCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred EEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCC-CCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCC
Confidence 444456778999999999987 999999985 22223456778999999999999999996 357886
Q ss_pred -----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEE
Q psy17821 87 -----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVV 146 (194)
Q Consensus 87 -----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~ 146 (194)
|.++|+|||||++| +|||||+ ||++|+|||+|++|||||++|+++++ .+++|.++|+|.
T Consensus 88 ~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I~ 166 (173)
T 2igv_A 88 EKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKPVKDCMIA 166 (173)
T ss_dssp SCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCSSCEEEE
T ss_pred CcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEE
Confidence 77799999999998 8999999 68999999999999999999999998 468999999999
Q ss_pred EEeeec
Q psy17821 147 KCNELN 152 (194)
Q Consensus 147 ~~g~~~ 152 (194)
+||++.
T Consensus 167 ~~g~l~ 172 (173)
T 2igv_A 167 DCGQLK 172 (173)
T ss_dssp EEEEEC
T ss_pred EeEEEc
Confidence 999985
No 6
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=4.7e-36 Score=241.90 Aligned_cols=135 Identities=20% Similarity=0.211 Sum_probs=113.8
Q ss_pred eeeeecCCceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec------
Q psy17821 12 RGIIPLENIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS------ 80 (194)
Q Consensus 12 ~G~i~l~~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~------ 80 (194)
.|..+-....|.. .++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+
T Consensus 9 ~~~~~~~~~~v~i-~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~g 76 (185)
T 2poe_A 9 SGRENLYFQGVRI-ITNYGDLKFELFCSQCPKACKNFLALSASG-----------YYKNTIFHKNIKGFIIQGGDPTGTG 76 (185)
T ss_dssp ------CCCEEEE-EETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTEEEEEECTTSEEEEEETTSSS
T ss_pred ccccCCCceEEEE-EecCccEEEEEeCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCCEEEcCCCCCCC
Confidence 4555556666544 4889999999999987 999999988 9999999999999999996
Q ss_pred --Cccccc------------CCCceeecccccC----C---Cccccee------eccceEEEeEEEccHHHHHHhhcCCc
Q psy17821 81 --EGKVVE------------GKHTVYRMSAATA----E---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPV 133 (194)
Q Consensus 81 --g~si~g------------~~~~g~l~man~g----~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~ 133 (194)
+.|+|| |+.+|+|||||.+ + +|||||+ ||++|+|||+|++||+||++|+++++
T Consensus 77 ~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 156 (185)
T 2poe_A 77 KGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPS 156 (185)
T ss_dssp SCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCB
T ss_pred CCCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCc
Confidence 457776 6689999999999 6 8999999 68999999999999999999999999
Q ss_pred CCCCCCCcceEEEEEeeecCcCCCCchh
Q psy17821 134 DKMSRPLQDVRVVKCNELNNLLEPTEMG 161 (194)
Q Consensus 134 ~~~~~P~~~i~I~~~g~~~~~l~p~~e~ 161 (194)
+.+++|.++|+|.+|+++.+ ||+++
T Consensus 157 ~~~~~P~~~v~I~~~~i~~d---Pf~d~ 181 (185)
T 2poe_A 157 DKSHKPIDEIIIKDIVIHSN---PIADQ 181 (185)
T ss_dssp CTTSCBSSCCEEEEEEEECC---C----
T ss_pred CCCCCcCCCeEEEEEEEECC---CCCCc
Confidence 98899999999999999987 66654
No 7
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=5.1e-36 Score=240.22 Aligned_cols=129 Identities=23% Similarity=0.280 Sum_probs=112.8
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+.+....++.|+|+||||++.+ ||++||+++. |. .|+.++|+++.|||++|+|||||+ +.|||
T Consensus 15 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~-g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 91 (177)
T 1mzw_A 15 FDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEF-RK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIY 91 (177)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCC-EE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTT
T ss_pred EEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhccc-CC--cCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccC
Confidence 3344456789999999999987 9999999872 21 355567999999999999999996 34788
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEE
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRV 145 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I 145 (194)
+ |..+|+|||||.++ +|||||+ ||++|+|||+|++|||||++|++++++.+++|.++|+|
T Consensus 92 g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I 171 (177)
T 1mzw_A 92 RGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVI 171 (177)
T ss_dssp SSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEE
T ss_pred CCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEE
Confidence 6 77899999999998 8999999 68999999999999999999999999889999999999
Q ss_pred EEEeee
Q psy17821 146 VKCNEL 151 (194)
Q Consensus 146 ~~~g~~ 151 (194)
.+||++
T Consensus 172 ~~cG~l 177 (177)
T 1mzw_A 172 SQCGEM 177 (177)
T ss_dssp EEEEEC
T ss_pred EeceeC
Confidence 999985
No 8
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.2e-35 Score=236.59 Aligned_cols=129 Identities=22% Similarity=0.261 Sum_probs=111.7
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+.+.+-.++.|+|+||||.+.+ ||++||++...| ..|+.++|+++.|||++|+|||||+ +.|+|
T Consensus 8 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g--~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 85 (170)
T 1qng_A 8 FDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIG--SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIY 85 (170)
T ss_dssp EEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEEC--TTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred EEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcC--ccCccceECCCEEEEEECCCEEEcCCccCCCCCCCcccc
Confidence 3444456778999999999987 999999864112 2456667999999999999999996 35788
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEE
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRV 145 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I 145 (194)
+ |.++|+|||||+++ +|||||+ ||++|+|||+|++|||||++|+++++ .+++|.++|+|
T Consensus 86 g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I 164 (170)
T 1qng_A 86 GRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVKRSVVI 164 (170)
T ss_dssp BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCSSCEEE
T ss_pred CCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCCCCeEE
Confidence 6 77899999999998 8999999 68999999999999999999999999 67999999999
Q ss_pred EEEeee
Q psy17821 146 VKCNEL 151 (194)
Q Consensus 146 ~~~g~~ 151 (194)
.+||++
T Consensus 165 ~~cG~l 170 (170)
T 1qng_A 165 TDCGEL 170 (170)
T ss_dssp EEEEEC
T ss_pred EeceeC
Confidence 999985
No 9
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1e-35 Score=240.48 Aligned_cols=131 Identities=22% Similarity=0.316 Sum_probs=113.2
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccCceeeec---------Cccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKYS---------EGKV 84 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~~~iqg~---------g~si 84 (194)
+.+..-.++.|+|+||||.+.+ ||++||+++.. + |+++.|||++++|||||+ +.||
T Consensus 20 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 90 (188)
T 3ich_A 20 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG---------FGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI 90 (188)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred EEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC---------ccccCCEEEEEECCCEEEcCCccCCCCCCCccc
Confidence 3444556789999999999987 99999986521 6 999999999999999996 3578
Q ss_pred cc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceE
Q psy17821 85 VE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVR 144 (194)
Q Consensus 85 ~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~ 144 (194)
|+ |+.+|+|||||.++ +|||||+ ||++|+|||+|++||+||++|++++++..++|.++|+
T Consensus 91 ~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~ 170 (188)
T 3ich_A 91 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVI 170 (188)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred cCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEE
Confidence 86 67899999999998 8999999 6899999999999999999999999998889999999
Q ss_pred EEEEeeecCcCCCCch
Q psy17821 145 VVKCNELNNLLEPTEM 160 (194)
Q Consensus 145 I~~~g~~~~~l~p~~e 160 (194)
|.+|+++.. -.||++
T Consensus 171 I~~~~~l~~-~~Pf~~ 185 (188)
T 3ich_A 171 IADCGKIEV-EKPFAI 185 (188)
T ss_dssp EEEEEEEEE-EEEEEC
T ss_pred EEEeEEEec-CCCCCC
Confidence 999999842 125544
No 10
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-35 Score=241.96 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=112.8
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec-------------Ccc
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS-------------EGK 83 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~-------------g~s 83 (194)
.+.+.++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|
T Consensus 8 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~s 76 (201)
T 3bo7_A 8 YLRIVTTQGSLNIELHADMAPRACDSFLRLCAVK-----------YFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQS 76 (201)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEECCGGGCCC-------CC
T ss_pred EEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcC-----------ccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcc
Confidence 34578899999999999987 999999988 9999999999999999997 347
Q ss_pred cc-------c------------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCC
Q psy17821 84 VV-------E------------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDK 135 (194)
Q Consensus 84 i~-------g------------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~ 135 (194)
+| + |..+|+|||||+++ +|||||+ ||++|+|||+|++|||||++|++++++.
T Consensus 77 i~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 156 (201)
T 3bo7_A 77 PRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDK 156 (201)
T ss_dssp SSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCT
T ss_pred ccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCC
Confidence 77 3 66899999999988 8999999 6899999999999999999999999998
Q ss_pred CCCCCcceEEEEEeeecCcCCCCchhhhhh
Q psy17821 136 MSRPLQDVRVVKCNELNNLLEPTEMGVAQF 165 (194)
Q Consensus 136 ~~~P~~~i~I~~~g~~~~~l~p~~e~va~~ 165 (194)
+++|.++|+|.+|+++.+ ||++...+.
T Consensus 157 ~~~P~~~i~I~~~~v~~d---Pf~d~~~~~ 183 (201)
T 3bo7_A 157 KDKPLKPPKVEEIIVFKN---PFEDARKEM 183 (201)
T ss_dssp TSCBSSCCBEEEEEEEEC---CC-------
T ss_pred CCCcCCCeEEEEEEEEcC---CccCHHHHH
Confidence 899999999999999987 777766653
No 11
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.7e-35 Score=238.81 Aligned_cols=129 Identities=20% Similarity=0.218 Sum_probs=111.2
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+.+.+-.++.|+|+||||.+.+ ||++||+++ .|....|+.++|+++.||||+|+|||||+ +.|||
T Consensus 24 ~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~-~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~ 102 (186)
T 2poy_A 24 FDISIGQTPAGRITMELFADKVPITAENFRALCTGE-KGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIY 102 (186)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTT-TCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred EEEeECCEecccEEEEEeCCCCcHHHHHHHHHhccc-CCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccC
Confidence 3444456778999999999987 999999865 22222466778999999999999999996 35787
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEE
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRV 145 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I 145 (194)
+ |.++|+|||||.+| +|||||+ ||++|+|||+|++|||||++|+++++ .+++|.++|+|
T Consensus 103 g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~P~~~v~I 181 (186)
T 2poy_A 103 GSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGKPTKSVCI 181 (186)
T ss_dssp C-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEE
T ss_pred CCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEE
Confidence 6 77899999999998 8999999 68999999999999999999999999 57899999999
Q ss_pred EEEee
Q psy17821 146 VKCNE 150 (194)
Q Consensus 146 ~~~g~ 150 (194)
.+||+
T Consensus 182 ~~cG~ 186 (186)
T 2poy_A 182 TASGV 186 (186)
T ss_dssp EEEEC
T ss_pred EeCCC
Confidence 99985
No 12
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-35 Score=240.57 Aligned_cols=131 Identities=21% Similarity=0.268 Sum_probs=118.6
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc--
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE-- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g-- 86 (194)
.+.+.++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+||
T Consensus 21 ~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~ 89 (197)
T 1zkc_A 21 YVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKH-----------YYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKP 89 (197)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSC
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCc
Confidence 34578889999999999987 999999988 9999999999999999996 457775
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCC-CCCCcceEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKM-SRPLQDVRVV 146 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~-~~P~~~i~I~ 146 (194)
|..+|+|||||.++ +|||||+ ||++|+|||+|++|||||++|++++++.. ++|.++|+|.
T Consensus 90 f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~ 169 (197)
T 1zkc_A 90 FKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRID 169 (197)
T ss_dssp BCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEE
T ss_pred cccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEE
Confidence 66899999999988 8999999 68999999999999999999999999876 9999999999
Q ss_pred EEeeecCcCCCCchhhhhhc
Q psy17821 147 KCNELNNLLEPTEMGVAQFL 166 (194)
Q Consensus 147 ~~g~~~~~l~p~~e~va~~L 166 (194)
+|+++.+ ||++..++.-
T Consensus 170 ~~~v~~d---Pf~d~~~~~~ 186 (197)
T 1zkc_A 170 ATTVFVD---PYEEADAQIA 186 (197)
T ss_dssp EEEEEEC---TTHHHHHHHH
T ss_pred EEEEEcC---CcccHHHHHH
Confidence 9999987 8888877653
No 13
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.4e-35 Score=235.31 Aligned_cols=137 Identities=21% Similarity=0.226 Sum_probs=111.2
Q ss_pred CCCCCCCCCCCeeeeecCCceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccC
Q psy17821 1 MDTGDDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKD 74 (194)
Q Consensus 1 ~~~~~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~ 74 (194)
|+++.....+|+-.+ .+..-.++.|+|+||||++.+ ||++||+++.. + |+++.|||++|+
T Consensus 1 ~~~~~~~~~~~~v~~-----di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~ 66 (172)
T 2cmt_A 1 MRTKKQKRNLPRVFF-----DIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG---------FGYHNCCFHRVIPQ 66 (172)
T ss_dssp --------CCCEEEE-----EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETT
T ss_pred CCccCCCCCCCEEEE-----EEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC---------ceECCCEEEEEECC
Confidence 455555555555433 344456789999999999987 99999997411 5 999999999999
Q ss_pred ceeeec---------Cccccc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHH
Q psy17821 75 EWIKYS---------EGKVVE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVV 125 (194)
Q Consensus 75 ~~iqg~---------g~si~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv 125 (194)
|||||+ +.|+|+ |.++|+|||||+++ +|||||+ ||++|+|||+|++|||||
T Consensus 67 f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv 146 (172)
T 2cmt_A 67 FMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVV 146 (172)
T ss_dssp TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHH
T ss_pred CEEEcCCccCCCCCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHH
Confidence 999996 357776 67899999999988 8999999 689999999999999999
Q ss_pred HHhhcCCcCCCCCCCcceEEEEEeeec
Q psy17821 126 SHIENLPVDKMSRPLQDVRVVKCNELN 152 (194)
Q Consensus 126 ~~I~~~~~~~~~~P~~~i~I~~~g~~~ 152 (194)
++|++++++ +++|.++|+|.+||++.
T Consensus 147 ~~I~~~~~~-~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 147 KKMESVGSK-SGKVKEPVIISRCGELI 172 (172)
T ss_dssp HHGGGGCCT-TCCCSSCEEEEEEEEEC
T ss_pred HHHHhCCCC-CCCCCCCEEEEEeEeEC
Confidence 999999984 68999999999999873
No 14
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.7e-35 Score=234.42 Aligned_cols=123 Identities=16% Similarity=0.147 Sum_probs=107.8
Q ss_pred eeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Cccccc
Q psy17821 21 QVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVVE 86 (194)
Q Consensus 21 ~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~g 86 (194)
.+....++.|+|+||||.+.+ ||++||+++. ..+|+++.|||++|+|||||+ +.|+|+
T Consensus 17 di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 88 (173)
T 2r99_A 17 DIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK--------GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYG 88 (173)
T ss_dssp EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred EEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC--------CceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCC
Confidence 444456789999999999987 9999998651 124999999999999999996 357886
Q ss_pred -----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEE
Q psy17821 87 -----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVV 146 (194)
Q Consensus 87 -----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~ 146 (194)
|..+|+|||||+++ +|||||+ ||++|+|||+|++|||||++|++++++ +++|.++|+|.
T Consensus 89 ~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~ 167 (173)
T 2r99_A 89 KKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVIIA 167 (173)
T ss_dssp SCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEE
T ss_pred CcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEEE
Confidence 77899999999998 8999999 689999999999999999999999985 68999999999
Q ss_pred EEeeec
Q psy17821 147 KCNELN 152 (194)
Q Consensus 147 ~~g~~~ 152 (194)
+||++.
T Consensus 168 ~cG~l~ 173 (173)
T 2r99_A 168 DCGEYV 173 (173)
T ss_dssp EEEECC
T ss_pred EeeeEC
Confidence 999873
No 15
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-35 Score=231.76 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=109.0
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc--
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE-- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g-- 86 (194)
...+.++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+|+
T Consensus 7 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~ 75 (160)
T 2fu0_A 7 SAIIYTTMGDIHISLFYKECKKTVQNFSVHSING-----------YYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNE 75 (160)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSC
T ss_pred EEEEEecCccEEEEEeCCCChHHHHHHHHHhccC-----------ccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCC
Confidence 34578899999999999987 999999988 9999999999999999996 457775
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 147 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~~ 147 (194)
|+++|+|||||.++ +|||||+ ||++|+|||+|++|||||++|++++++.+++|.++|+|.+
T Consensus 76 ~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 155 (160)
T 2fu0_A 76 FEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILN 155 (160)
T ss_dssp BCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEE
T ss_pred ccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 67899999999988 8999999 6899999999999999999999999998899999999999
Q ss_pred Eeee
Q psy17821 148 CNEL 151 (194)
Q Consensus 148 ~g~~ 151 (194)
|.+.
T Consensus 156 ~~v~ 159 (160)
T 2fu0_A 156 IKIN 159 (160)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 16
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=3.1e-35 Score=234.58 Aligned_cols=123 Identities=22% Similarity=0.248 Sum_probs=110.2
Q ss_pred CceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccCceeeec---------Ccc
Q psy17821 19 NIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKYS---------EGK 83 (194)
Q Consensus 19 ~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~~~iqg~---------g~s 83 (194)
.+++.+..++.|+|+||||++.+ ||++||++... + |+++.|||++|+|||||+ +.|
T Consensus 15 ~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 85 (172)
T 2haq_A 15 YFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG---------FGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKS 85 (172)
T ss_dssp EEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBCCEEETTTEEEECCTTTSSSSCCCC
T ss_pred EEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEECCCEEecCCccCCCCCCCcc
Confidence 45666778899999999999987 99999975521 6 999999999999999996 357
Q ss_pred ccc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcce
Q psy17821 84 VVE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDV 143 (194)
Q Consensus 84 i~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i 143 (194)
+|+ |. +|+|||||.++ +|||||+ ||++|+|||+|++|||||++|+++++++.++|.++|
T Consensus 86 i~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v 164 (172)
T 2haq_A 86 IYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPV 164 (172)
T ss_dssp SSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCE
T ss_pred ccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCe
Confidence 876 56 99999999998 8999999 689999999999999999999999998888999999
Q ss_pred EEEEEeee
Q psy17821 144 RVVKCNEL 151 (194)
Q Consensus 144 ~I~~~g~~ 151 (194)
+|.+||++
T Consensus 165 ~I~~~g~l 172 (172)
T 2haq_A 165 KIVASGEL 172 (172)
T ss_dssp EEEEEEEC
T ss_pred EEEEeEEC
Confidence 99999975
No 17
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.9e-35 Score=235.51 Aligned_cols=126 Identities=22% Similarity=0.290 Sum_probs=111.4
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+.+.+-.++.|+|+||||.+.+ ||++||+++ +..+|+++.|||++|+|||||+ +.|+|
T Consensus 17 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~--------~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 88 (185)
T 4fru_A 17 FDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGE--------KGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIY 88 (185)
T ss_dssp EEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTT--------TSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcC--------CCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCcccc
Confidence 3444556788999999999987 999999875 2226999999999999999996 35677
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEE
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRV 145 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I 145 (194)
+ |..+|++||||.++ +|||||+ ||++|+|||+|++|||||++|++++++.+++|.++|+|
T Consensus 89 g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I 168 (185)
T 4fru_A 89 GERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTI 168 (185)
T ss_dssp BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEE
T ss_pred CCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEE
Confidence 5 77899999999998 8999999 68999999999999999999999999989999999999
Q ss_pred EEEeeecC
Q psy17821 146 VKCNELNN 153 (194)
Q Consensus 146 ~~~g~~~~ 153 (194)
.+||++..
T Consensus 169 ~~~g~l~~ 176 (185)
T 4fru_A 169 ADCGKIEV 176 (185)
T ss_dssp EEEEEEEE
T ss_pred EEceEEec
Confidence 99999863
No 18
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5e-35 Score=232.27 Aligned_cols=119 Identities=16% Similarity=0.182 Sum_probs=109.0
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc--
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE-- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g-- 86 (194)
.+.++++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+|+
T Consensus 13 ~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~ 81 (166)
T 2x7k_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQ 81 (166)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSC
T ss_pred EEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcC-----------CCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCc
Confidence 34578889999999999987 999999988 9999999999999999996 467776
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 147 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~~ 147 (194)
|..+|+|||||+++ +|||||+ ||++|+|||+|++|||||++|+++++++.++|.++|+|.+
T Consensus 82 ~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~ 161 (166)
T 2x7k_A 82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (166)
T ss_dssp BCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEE
T ss_pred cccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 66799999999988 8999999 6899999999999999999999999998899999999999
Q ss_pred Eeee
Q psy17821 148 CNEL 151 (194)
Q Consensus 148 ~g~~ 151 (194)
|.++
T Consensus 162 ~~i~ 165 (166)
T 2x7k_A 162 AYPS 165 (166)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 19
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=6e-35 Score=231.34 Aligned_cols=123 Identities=14% Similarity=0.210 Sum_probs=109.5
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccCceeeec---------Cccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKYS---------EGKV 84 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~~~iqg~---------g~si 84 (194)
++|.+..++.|+|+||||++.+ ||++||+++.. + |+++.|||++|+|||||+ +.|+
T Consensus 7 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si 77 (164)
T 3pmp_A 7 FNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG---------FGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSI 77 (164)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred EEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC---------CcccCCEEEEEECCCeEEeCCCCCCCCCCCccc
Confidence 4566677889999999999987 99999996621 5 999999999999999986 3567
Q ss_pred cc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceE
Q psy17821 85 VE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVR 144 (194)
Q Consensus 85 ~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~ 144 (194)
|+ |.++|++||||.++ +|||||+ ||++|+|||+|++|||||++|++++++ +++|.++|+
T Consensus 78 ~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~ 156 (164)
T 3pmp_A 78 YGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIK 156 (164)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEE
T ss_pred CCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEE
Confidence 76 78899999999998 8999999 689999999999999999999999996 799999999
Q ss_pred EEEEeeec
Q psy17821 145 VVKCNELN 152 (194)
Q Consensus 145 I~~~g~~~ 152 (194)
|.+||++.
T Consensus 157 I~~cg~l~ 164 (164)
T 3pmp_A 157 ITDCGTVA 164 (164)
T ss_dssp EEEEEEC-
T ss_pred EEeCeEEC
Confidence 99999873
No 20
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.6e-35 Score=237.41 Aligned_cols=121 Identities=12% Similarity=0.147 Sum_probs=109.0
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc--
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE-- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g-- 86 (194)
.+.++++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+||
T Consensus 40 ~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~ 108 (196)
T 2b71_A 40 YITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMG-----------FYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEY 108 (196)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSC
T ss_pred EEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCc
Confidence 34577889999999999987 999999988 9999999999999999996 457776
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 147 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~~ 147 (194)
|+.+|+|||||.++ +|||||+ ||++|+|||+|++||+||++|++++++..++|.++|+|.+
T Consensus 109 ~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 109 FEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred ccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 66899999999988 8999999 6899999999999999999999999998899999999999
Q ss_pred EeeecC
Q psy17821 148 CNELNN 153 (194)
Q Consensus 148 ~g~~~~ 153 (194)
|.++.+
T Consensus 189 ~~i~~d 194 (196)
T 2b71_A 189 TSTAVN 194 (196)
T ss_dssp EEC---
T ss_pred EEEecC
Confidence 999876
No 21
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.4e-34 Score=229.57 Aligned_cols=122 Identities=20% Similarity=0.236 Sum_probs=108.2
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccCceeeec---------Cccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKYS---------EGKV 84 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~~~iqg~---------g~si 84 (194)
+.+.+..++.|+|+||||.+.+ ||++||+++.. + |+++.|||++|+|||||+ +.|+
T Consensus 8 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si 78 (165)
T 2z6w_A 8 LDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG---------FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI 78 (165)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred EEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC---------ccCcCCEEEEEECCCEEEeCCccCCCCCCCCcc
Confidence 3444567789999999999987 99999996521 6 999999999999999996 3577
Q ss_pred cc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceE
Q psy17821 85 VE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVR 144 (194)
Q Consensus 85 ~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~ 144 (194)
|+ |.++|+|||||.++ +|||||+ ||++|+|||+|++|||||++|+++++ .+++|.++|+
T Consensus 79 ~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~ 157 (165)
T 2z6w_A 79 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIV 157 (165)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEE
T ss_pred cCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEE
Confidence 76 67799999999998 8999999 68999999999999999999999996 6899999999
Q ss_pred EEEEeee
Q psy17821 145 VVKCNEL 151 (194)
Q Consensus 145 I~~~g~~ 151 (194)
|.+||++
T Consensus 158 I~~~g~l 164 (165)
T 2z6w_A 158 ITDCGQL 164 (165)
T ss_dssp EEEEEEC
T ss_pred EEEeEEE
Confidence 9999987
No 22
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-34 Score=232.01 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=112.7
Q ss_pred eeeecCCceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec-------
Q psy17821 13 GIIPLENIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS------- 80 (194)
Q Consensus 13 G~i~l~~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~------- 80 (194)
+--|-..-....+.++.|+|+||||.+.+ ||++||+.+ +|+++.|||++|+|||||+
T Consensus 14 ~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~g~ 82 (176)
T 2a2n_A 14 AEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNG-----------YYNGHTFHRIIKGFMIQTGDPTGTGM 82 (176)
T ss_dssp CCSCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTTSSSS
T ss_pred CCCCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcC-----------ccCCCEEEEEECCcEEEccCCCCCCC
Confidence 33344455566788999999999999987 999999988 9999999999999999996
Q ss_pred -Cccccc------------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcC-CCC
Q psy17821 81 -EGKVVE------------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVD-KMS 137 (194)
Q Consensus 81 -g~si~g------------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~-~~~ 137 (194)
+.|+|| |+++|+|||||.++ +|||||+ ||++|+|||+|++|||||++|++++++ .++
T Consensus 83 gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 162 (176)
T 2a2n_A 83 GGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTD 162 (176)
T ss_dssp CCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTC
T ss_pred CCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCC
Confidence 457775 67899999999988 8999999 689999999999999999999999998 689
Q ss_pred CCCcceEEEEEee
Q psy17821 138 RPLQDVRVVKCNE 150 (194)
Q Consensus 138 ~P~~~i~I~~~g~ 150 (194)
+|.++|+|.+|.+
T Consensus 163 ~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 KPYEDVSIINITV 175 (176)
T ss_dssp CBSSCCBEEEEEE
T ss_pred ccCCCeEEEEEEE
Confidence 9999999999865
No 23
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-34 Score=240.17 Aligned_cols=124 Identities=21% Similarity=0.245 Sum_probs=110.0
Q ss_pred ccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Cccccc----
Q psy17821 25 VHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVVE---- 86 (194)
Q Consensus 25 ~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~g---- 86 (194)
-.++.|+|+||||.+.+ ||++||+++. | ..|+.++|+++.||||+|+|||||+ +.|||+
T Consensus 69 ~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~-g--~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~ 145 (229)
T 1z81_A 69 GNNFLGKFKFELFQNIVPKTSENFRQFCTGEY-K--VNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFD 145 (229)
T ss_dssp TTEEEEEEEEEECTTTCHHHHHHHHHHHHTCC-B--SSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCC
T ss_pred CCeecccEEEEEcCCCCCHHHHHHHHHhhCCC-C--CcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCccc
Confidence 34678999999999987 9999999872 2 1256678999999999999999996 347886
Q ss_pred -------CCCceeecccccCC---Cccccee------eccceEEEeEEE--ccHHHHHHhhcCCcCCC-CCCCcceEEEE
Q psy17821 87 -------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVV--SGQNVVSHIENLPVDKM-SRPLQDVRVVK 147 (194)
Q Consensus 87 -------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~--~G~dvv~~I~~~~~~~~-~~P~~~i~I~~ 147 (194)
|+.+|+|||||.++ +|||||+ ||++|||||||+ +|||||++|++++++++ ++|.++|+|.+
T Consensus 146 dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~ 225 (229)
T 1z81_A 146 DENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVE 225 (229)
T ss_dssp CCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEE
T ss_pred ccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEe
Confidence 67899999999998 8999999 689999999999 99999999999999876 99999999999
Q ss_pred Eeee
Q psy17821 148 CNEL 151 (194)
Q Consensus 148 ~g~~ 151 (194)
||++
T Consensus 226 cG~l 229 (229)
T 1z81_A 226 CGEL 229 (229)
T ss_dssp EEEC
T ss_pred CeeC
Confidence 9985
No 24
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=232.08 Aligned_cols=122 Identities=17% Similarity=0.186 Sum_probs=106.9
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Cccccc-
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVVE- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~g- 86 (194)
+.+-.++.|+|+||||++.+ ||++||+++. ...|+++.|||++|+|||||+ +.|+|+
T Consensus 29 i~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 100 (184)
T 3rdd_A 29 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK--------GFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE 100 (184)
T ss_dssp EEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTT--------SCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred EeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCc--------CcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCC
Confidence 33455678999999999987 9999998871 112999999999999999996 356776
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 147 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~~ 147 (194)
|..+|+|||||.++ +|||||+ ||++|+|||+|++|||||++|+++++ ++++|.++|+|.+
T Consensus 101 ~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~P~~~v~I~~ 179 (184)
T 3rdd_A 101 KFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKTSKKITIAD 179 (184)
T ss_dssp CBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCSSCEEEEE
T ss_pred cccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCCCcCCeEEEe
Confidence 67899999999988 8999999 68999999999999999999999997 5799999999999
Q ss_pred Eeeec
Q psy17821 148 CNELN 152 (194)
Q Consensus 148 ~g~~~ 152 (194)
||++.
T Consensus 180 cG~l~ 184 (184)
T 3rdd_A 180 CGQLE 184 (184)
T ss_dssp EEECC
T ss_pred CeEEC
Confidence 99874
No 25
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=234.50 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=111.3
Q ss_pred eEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc--
Q psy17821 22 VREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE-- 86 (194)
Q Consensus 22 v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g-- 86 (194)
.+.++++.|+|+||||.+.+ ||++||+.+ +|+++.|||++|+||||++ +.|+|+
T Consensus 13 ~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~ 81 (203)
T 2k7n_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQ 81 (203)
T ss_dssp EEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHT-----------CGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSC
T ss_pred EEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcC-----------ccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCc
Confidence 34578889999999999887 999999988 9999999999999999995 457775
Q ss_pred ----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceEEEE
Q psy17821 87 ----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 147 (194)
Q Consensus 87 ----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~I~~ 147 (194)
|..+|+|+|||.++ +|||||+ ||++|+|||+|++|||||++|+++++++.++|.++|+|.+
T Consensus 82 f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~ 161 (203)
T 2k7n_A 82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (203)
T ss_dssp BCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEE
T ss_pred ccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 66799999999988 7999999 6899999999999999999999999988899999999999
Q ss_pred EeeecCc
Q psy17821 148 CNELNNL 154 (194)
Q Consensus 148 ~g~~~~~ 154 (194)
|+++...
T Consensus 162 ~~v~~~~ 168 (203)
T 2k7n_A 162 AYPSGGG 168 (203)
T ss_dssp EEECCCC
T ss_pred EEEEecC
Confidence 9999873
No 26
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=7.3e-34 Score=230.49 Aligned_cols=124 Identities=17% Similarity=0.169 Sum_probs=109.1
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec---------Ccccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS---------EGKVV 85 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si~ 85 (194)
+++.+-.++.|+|+||||++.+ ||++||+++. ..+|+++.|||++|+|||||+ +.|+|
T Consensus 32 ~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 103 (193)
T 3k2c_A 32 FDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPK--------GEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIY 103 (193)
T ss_dssp EEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCT--------TSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred EEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhcccc--------CCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccC
Confidence 4445566889999999999987 9999999662 113999999999999999986 35677
Q ss_pred c-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCC--cce
Q psy17821 86 E-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPL--QDV 143 (194)
Q Consensus 86 g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~--~~i 143 (194)
+ |+.+|++||||.++ +|||||+ ||++|+|||+|++|||||++|++++++ +++|. ++|
T Consensus 104 g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v 182 (193)
T 3k2c_A 104 GEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRI 182 (193)
T ss_dssp SSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCE
T ss_pred CCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccE
Confidence 6 67899999999998 8999999 689999999999999999999999996 68999 999
Q ss_pred EEEEEeeec
Q psy17821 144 RVVKCNELN 152 (194)
Q Consensus 144 ~I~~~g~~~ 152 (194)
+|.+||++.
T Consensus 183 ~I~~cG~l~ 191 (193)
T 3k2c_A 183 EIRDCGVLG 191 (193)
T ss_dssp EEEEEEECC
T ss_pred EEEEceEeC
Confidence 999999986
No 27
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.5e-34 Score=228.59 Aligned_cols=117 Identities=25% Similarity=0.290 Sum_probs=95.2
Q ss_pred cccCccEEEEEcCCcc-----chhhhcccCCCCeeecCccee-eecCccCccccCceeeec---------Cccccc----
Q psy17821 26 HDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTV-YRMSAATAEEKDEWIKYS---------EGKVVE---- 86 (194)
Q Consensus 26 ~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~-Y~~s~f~rv~~~~~iqg~---------g~si~g---- 86 (194)
.|+.|+|+||||++.+ ||++||++... + |+++.|||++|+|||||+ +.|||+
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~ 88 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG---------EGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFA 88 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------TSSTTCBCCEEETTTEEEECC------------------
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCccc
Confidence 4566999999999987 99999996521 4 999999999999999996 357886
Q ss_pred -------CCCceeecccccCC---Cccccee------eccceEEEeEEEc--cHHHHHHhhcCCcCCCC-CCCcceEEEE
Q psy17821 87 -------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVS--GQNVVSHIENLPVDKMS-RPLQDVRVVK 147 (194)
Q Consensus 87 -------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~--G~dvv~~I~~~~~~~~~-~P~~~i~I~~ 147 (194)
|+.+|+|||||.++ +|||||+ ||++|+|||+|++ ||+||++|++++++..+ +|.++|+|.+
T Consensus 89 dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~ 168 (172)
T 2c3b_A 89 DENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVN 168 (172)
T ss_dssp ----CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEE
T ss_pred CcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEe
Confidence 67799999999988 8999999 6899999999999 99999999999997655 9999999999
Q ss_pred Eeee
Q psy17821 148 CNEL 151 (194)
Q Consensus 148 ~g~~ 151 (194)
||++
T Consensus 169 cG~l 172 (172)
T 2c3b_A 169 CGEL 172 (172)
T ss_dssp EEEC
T ss_pred CeeC
Confidence 9975
No 28
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.4e-33 Score=234.79 Aligned_cols=134 Identities=16% Similarity=0.205 Sum_probs=109.6
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCC-----CCee----ecCcceeeecCccCccccCceeeec-----
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDS-----EGKV----VEGKHTVYRMSAATAEEKDEWIKYS----- 80 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~-----~g~~----v~g~~~~Y~~s~f~rv~~~~~iqg~----- 80 (194)
+.|.+-.++.|+|+||||.+.+ ||++||+++. .+.. ..|+.++|+++.||||+++|||||+
T Consensus 19 ~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g 98 (234)
T 2ose_A 19 MDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNS 98 (234)
T ss_dssp EEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC--
T ss_pred EEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCC
Confidence 3444455889999999999987 9999999751 1100 1133345999999999999999996
Q ss_pred ----Cccccc--------------CCCceeecccc----cCC---Ccccceee------------ccceEEEeEEEccHH
Q psy17821 81 ----EGKVVE--------------GKHTVYRMSAA----TAE---EKDEWIKC------------LRVHVVFGHVVSGQN 123 (194)
Q Consensus 81 ----g~si~g--------------~~~~g~l~man----~g~---~sqf~i~l------------~g~~vvFG~V~~G~d 123 (194)
+.|||| |+.+|+||||| +++ +|||||++ |++|||||+|++|||
T Consensus 99 ~G~Gg~siyg~~~~p~~f~~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~Gmd 178 (234)
T 2ose_A 99 NGSSAGTVYCDEPIPPVFGDYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLD 178 (234)
T ss_dssp --CCCCCTTTTCCBCCCCCSCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHH
T ss_pred CCCCCccccCCccCcccccCcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHH
Confidence 346764 45799999999 887 89999974 568999999999999
Q ss_pred HHHHhhcCCcCCCCCCCcceEEEEEeeecC
Q psy17821 124 VVSHIENLPVDKMSRPLQDVRVVKCNELNN 153 (194)
Q Consensus 124 vv~~I~~~~~~~~~~P~~~i~I~~~g~~~~ 153 (194)
||++|++++++.+++|.++|+|.+|+++.+
T Consensus 179 Vv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 179 VLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp HHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred HHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 999999999998899999999999999986
No 29
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.4e-33 Score=227.07 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=110.5
Q ss_pred eecCCceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCee--ecC---cceeeecCccCccccCceeeecC---
Q psy17821 15 IPLENIQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKV--VEG---KHTVYRMSAATAEEKDEWIKYSE--- 81 (194)
Q Consensus 15 i~l~~~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~--v~g---~~~~Y~~s~f~rv~~~~~iqg~g--- 81 (194)
.|..+..| .+.++.|+|+||||.+.+ ||++||+++ +++. ..| +..+|+++.||||+|+|||||+.
T Consensus 19 ~~~~~~~v-~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~-~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g 96 (191)
T 1w74_A 19 SPLATATA-TLHTNRGDIKIALFGNHAPKTVANFVGLAQGT-KDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG 96 (191)
T ss_dssp --CCSEEE-EEEETTEEEEEEECTTTSHHHHHHHHHHHHTC-SCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTS
T ss_pred CCCCCeEE-EEEecceeEEEEEcCCCChHHHHHHHHHhcCC-cccccccccccccCCccCCCEEEEEeCCCEEecCCCCC
Confidence 34455444 568889999999999987 999999876 2211 111 23589999999999999999961
Q ss_pred --ccccc------------CCCceeecccccCC---Cccccee------eccceEEEeEEEc--cHHHHHHhhcCCcCCC
Q psy17821 82 --GKVVE------------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVS--GQNVVSHIENLPVDKM 136 (194)
Q Consensus 82 --~si~g------------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~--G~dvv~~I~~~~~~~~ 136 (194)
..-|+ |+.+|+|||||++| +|||||+ ||++|||||+|++ ||+||++|++++++.+
T Consensus 97 ~G~gg~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~ 176 (191)
T 1w74_A 97 TGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGN 176 (191)
T ss_dssp SSSCCSSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTT
T ss_pred CCCCCCCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCC
Confidence 11122 77899999999998 8999999 6899999999999 9999999999999988
Q ss_pred CCCCcceEEEEEeee
Q psy17821 137 SRPLQDVRVVKCNEL 151 (194)
Q Consensus 137 ~~P~~~i~I~~~g~~ 151 (194)
++|.++|+|.+|+++
T Consensus 177 ~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 177 DRPTDPVVIESITIS 191 (191)
T ss_dssp SCBSSCCEEEEEEEC
T ss_pred CCcCCCeEEEEEEEC
Confidence 999999999999874
No 30
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=225.72 Aligned_cols=123 Identities=16% Similarity=0.225 Sum_probs=109.9
Q ss_pred EeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Cccccc---
Q psy17821 23 REVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVVE--- 86 (194)
Q Consensus 23 ~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~g--- 86 (194)
+.++++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.|+|+
T Consensus 27 V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~ 95 (185)
T 2hq6_A 27 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEA-----------YYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPF 95 (185)
T ss_dssp EEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCB
T ss_pred EEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCcc
Confidence 3567889999999999987 999999988 9999999999999999996 357775
Q ss_pred ---------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHH--HHHhhcCCcCCCCCCCcceEEE
Q psy17821 87 ---------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNV--VSHIENLPVDKMSRPLQDVRVV 146 (194)
Q Consensus 87 ---------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dv--v~~I~~~~~~~~~~P~~~i~I~ 146 (194)
|+.+|+|||||.++ +|||||+ ||++|+|||+|+ |+++ +++|++++++.+++|.++|+|.
T Consensus 96 ~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~ 174 (185)
T 2hq6_A 96 KDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIK 174 (185)
T ss_dssp CCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEE
T ss_pred ccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEE
Confidence 57899999999987 8999999 689999999999 8886 4789999999899999999999
Q ss_pred EEeeecCcCCCCch
Q psy17821 147 KCNELNNLLEPTEM 160 (194)
Q Consensus 147 ~~g~~~~~l~p~~e 160 (194)
+|+++.+ ||++
T Consensus 175 ~~~v~~~---Pf~d 185 (185)
T 2hq6_A 175 SCEVLFN---PFDD 185 (185)
T ss_dssp EEEEEEC---TTC-
T ss_pred EEEEeCC---CCCC
Confidence 9999987 6653
No 31
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=3.4e-33 Score=221.83 Aligned_cols=118 Identities=22% Similarity=0.212 Sum_probs=104.0
Q ss_pred EeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeecC------ccccc-----
Q psy17821 23 REVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE------GKVVE----- 86 (194)
Q Consensus 23 ~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g------~si~g----- 86 (194)
+.++|+.|+|+||||.+.+ ||++||+.+ +|+++.|||++++|||||+. .+.++
T Consensus 6 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~~~~~~~~~~~ 74 (167)
T 3s6m_A 6 VELHTNHGVIKLELDEAKAPKTVENFLNYVKKG-----------HYDGTIFHRVINGFMIQGGGFEPGLKQKPTDAPIAN 74 (167)
T ss_dssp EEEEETTEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEESSEETTTEECCCCCCBCC
T ss_pred EEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhc-----------ccCCCEeEEecCCcEEEeccccCCCCCCCCCCccCC
Confidence 4578999999999999987 999999988 99999999999999999961 12222
Q ss_pred ------CCCceeecccc-cCC---Cccccee------eccc--------eEEEeEEEccHHHHHHhhcCCcCC----CCC
Q psy17821 87 ------GKHTVYRMSAA-TAE---EKDEWIK------CLRV--------HVVFGHVVSGQNVVSHIENLPVDK----MSR 138 (194)
Q Consensus 87 ------~~~~g~l~man-~g~---~sqf~i~------l~g~--------~vvFG~V~~G~dvv~~I~~~~~~~----~~~ 138 (194)
++.+|+||||| .+| +|||||+ ||++ |+|||+|++|||||++|+++++++ +++
T Consensus 75 E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~ 154 (167)
T 3s6m_A 75 EANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDV 154 (167)
T ss_dssp CGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTC
T ss_pred cccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCC
Confidence 56899999999 456 8999999 5777 999999999999999999999987 689
Q ss_pred CCcceEEEEEeee
Q psy17821 139 PLQDVRVVKCNEL 151 (194)
Q Consensus 139 P~~~i~I~~~g~~ 151 (194)
|.++|+|.+|.++
T Consensus 155 P~~~v~I~~~~il 167 (167)
T 3s6m_A 155 PNDDVVIEKAVVV 167 (167)
T ss_dssp BSSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEC
Confidence 9999999999874
No 32
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.98 E-value=1.8e-33 Score=222.87 Aligned_cols=117 Identities=19% Similarity=0.217 Sum_probs=104.1
Q ss_pred eccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec------Cccccc------
Q psy17821 24 EVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS------EGKVVE------ 86 (194)
Q Consensus 24 ~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~------g~si~g------ 86 (194)
.++|+.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.++|+
T Consensus 3 ~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~g~~~~g~~~~dE 71 (164)
T 1lop_A 3 TFHTNHGDIVIKTFDDKAPETVKNFLDYCREG-----------FYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNE 71 (164)
T ss_dssp EEEETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEESSEETTTEECCCCCCBCCC
T ss_pred EEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCceEecCCcccCCCcCCCCCccccc
Confidence 578899999999999987 999999988 9999999999999999996 345554
Q ss_pred -----CCCceeeccccc-CC---Cccccee------eccc--------eEEEeEEEccHHHHHHhhcCCcCC----CCCC
Q psy17821 87 -----GKHTVYRMSAAT-AE---EKDEWIK------CLRV--------HVVFGHVVSGQNVVSHIENLPVDK----MSRP 139 (194)
Q Consensus 87 -----~~~~g~l~man~-g~---~sqf~i~------l~g~--------~vvFG~V~~G~dvv~~I~~~~~~~----~~~P 139 (194)
++.+|+|||||+ +| +|||||+ ||++ |+|||+|++|||||++|++++++. +++|
T Consensus 72 ~~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 151 (164)
T 1lop_A 72 ANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVP 151 (164)
T ss_dssp CCSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEE
T ss_pred cccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCc
Confidence 457999999974 56 8999999 5777 999999999999999999999975 5899
Q ss_pred CcceEEEEEeee
Q psy17821 140 LQDVRVVKCNEL 151 (194)
Q Consensus 140 ~~~i~I~~~g~~ 151 (194)
.++|+|.+|+++
T Consensus 152 ~~~v~I~~~~v~ 163 (164)
T 1lop_A 152 KEDVIIESVTVS 163 (164)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999976
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.97 E-value=6.9e-33 Score=219.92 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=103.4
Q ss_pred EeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec------Cccccc-----
Q psy17821 23 REVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS------EGKVVE----- 86 (194)
Q Consensus 23 ~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~------g~si~g----- 86 (194)
+.++++.|+|+||||++.+ ||++||+.+ +|+++.|||++|+|||||+ +.+.|+
T Consensus 7 v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~~~~~g~~~~d 75 (166)
T 1v9t_A 7 VLLTTSAGNIELELDKQKAPVSVQNFVDYVNSG-----------FYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKN 75 (166)
T ss_dssp EEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEESSBCTTCCBCCCCCCBCC
T ss_pred EEEEeCCccEEEEEcCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCcEEEcCCcCcCCCCCCCCCcccc
Confidence 4567889999999999987 999999988 9999999999999999996 122222
Q ss_pred ------CCCceeeccccc-CC---Cccccee------eccc-----eEEEeEEEccHHHHHHhhcCCcCC----CCCCCc
Q psy17821 87 ------GKHTVYRMSAAT-AE---EKDEWIK------CLRV-----HVVFGHVVSGQNVVSHIENLPVDK----MSRPLQ 141 (194)
Q Consensus 87 ------~~~~g~l~man~-g~---~sqf~i~------l~g~-----~vvFG~V~~G~dvv~~I~~~~~~~----~~~P~~ 141 (194)
|+.+|+|||||+ +| +|||||+ ||++ |+|||+|++|||||++|+++++++ .++|.+
T Consensus 76 E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~ 155 (166)
T 1v9t_A 76 EADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSK 155 (166)
T ss_dssp CGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESS
T ss_pred cccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCC
Confidence 677999999997 45 8999999 5777 999999999999999999999976 479999
Q ss_pred ceEEEEEeee
Q psy17821 142 DVRVVKCNEL 151 (194)
Q Consensus 142 ~i~I~~~g~~ 151 (194)
+|+|.+|.++
T Consensus 156 ~v~I~~~~v~ 165 (166)
T 1v9t_A 156 PVVILSATVL 165 (166)
T ss_dssp CCBEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 9999999875
No 34
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.1e-32 Score=229.05 Aligned_cols=127 Identities=19% Similarity=0.200 Sum_probs=112.4
Q ss_pred EeccccCccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec--------Ccccc--c-
Q psy17821 23 REVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS--------EGKVV--E- 86 (194)
Q Consensus 23 ~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~--------g~si~--g- 86 (194)
+.++++.|+|+||||.+.+ ||++||+.+ +|+++.||||+++|||||+ +.||| |
T Consensus 24 V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~ 92 (232)
T 3bkp_A 24 VVLHTSLGDLDVELWARECPLACRNFVQLCLEG-----------YYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGK 92 (232)
T ss_dssp EEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHT-----------TTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTC
T ss_pred EEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCC
Confidence 4578889999999999987 999999988 9999999999999999996 45787 4
Q ss_pred -----------CCCceeecccccCC-----------------Cccccee------eccceEEEeEEEccHHH--HHHhhc
Q psy17821 87 -----------GKHTVYRMSAATAE-----------------EKDEWIK------CLRVHVVFGHVVSGQNV--VSHIEN 130 (194)
Q Consensus 87 -----------~~~~g~l~man~g~-----------------~sqf~i~------l~g~~vvFG~V~~G~dv--v~~I~~ 130 (194)
|+.+|+|||||.++ +|||||+ ||++|||||+|+ ||+| |++|++
T Consensus 93 ~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~ 171 (232)
T 3bkp_A 93 PFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFND 171 (232)
T ss_dssp CBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTT
T ss_pred ccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHc
Confidence 56799999999764 6899999 689999999999 7765 899999
Q ss_pred CCcCCCCCCCcceEEEEEeeecCcCCCCchhhhh
Q psy17821 131 LPVDKMSRPLQDVRVVKCNELNNLLEPTEMGVAQ 164 (194)
Q Consensus 131 ~~~~~~~~P~~~i~I~~~g~~~~~l~p~~e~va~ 164 (194)
++++.+++|.++|+|.+|+++.+ ||++.++.
T Consensus 172 ~~t~~~~~P~~~i~I~~~~vl~d---Pf~d~~~~ 202 (232)
T 3bkp_A 172 LEVGKEDRPMTPPFIKSVDVLWN---PFEDLVPR 202 (232)
T ss_dssp SCBCGGGCBSSCCBEEEEEEEEC---CCTTCCCS
T ss_pred CCcCCCCCcCCCeEEEEEEEEcC---Chhhhhhc
Confidence 99998999999999999999987 77776653
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.97 E-value=4.2e-32 Score=237.50 Aligned_cols=132 Identities=22% Similarity=0.280 Sum_probs=113.8
Q ss_pred ceeEeccccCccEEEEEcCCcc-----chhhhcccCCCCee-ecCcceeeecCccCccccCceeeec---------Cccc
Q psy17821 20 IQVREVHDRHKPHCFELFTSGF-----EFIKACKTDSEGKV-VEGKHTVYRMSAATAEEKDEWIKYS---------EGKV 84 (194)
Q Consensus 20 ~~v~~~~~~~g~i~feL~~~~~-----NFi~Lc~~~~~g~~-v~g~~~~Y~~s~f~rv~~~~~iqg~---------g~si 84 (194)
+.+.+-.++.|+|+||||++.+ ||++||+++ .|.. ..|+.++|+++.||||+|+|||||| +.||
T Consensus 20 ~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~-~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~~~ 98 (370)
T 1ihg_A 20 FDVDIGGERVGRIVLELFADIVPKTAENFRALCTGE-KGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESI 98 (370)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCT-TCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred EEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCC-cCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCCCC
Confidence 3444456778999999999987 999999986 2221 1245568999999999999999996 4578
Q ss_pred cc-----------CCCceeecccccCC---Cccccee------eccceEEEeEEEccHHHHHHhhcCCcCCCCCCCcceE
Q psy17821 85 VE-----------GKHTVYRMSAATAE---EKDEWIK------CLRVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVR 144 (194)
Q Consensus 85 ~g-----------~~~~g~l~man~g~---~sqf~i~------l~g~~vvFG~V~~G~dvv~~I~~~~~~~~~~P~~~i~ 144 (194)
|| |+.+|++||||.|| +|||||+ |||+|||||+|++||+||++|++++++. ++|..+|+
T Consensus 99 ~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~~~v~ 177 (370)
T 1ihg_A 99 YGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPAKLCV 177 (370)
T ss_dssp TBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEESSCEE
T ss_pred CCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-CccceeEE
Confidence 86 77899999999998 8999998 6899999999999999999999999976 99999999
Q ss_pred EEEEeeecC
Q psy17821 145 VVKCNELNN 153 (194)
Q Consensus 145 I~~~g~~~~ 153 (194)
|.+|+++..
T Consensus 178 I~~~g~l~~ 186 (370)
T 1ihg_A 178 IAECGELKE 186 (370)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEecc
Confidence 999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.92 E-value=6.7e-26 Score=198.79 Aligned_cols=91 Identities=9% Similarity=-0.028 Sum_probs=81.0
Q ss_pred CccEEEEEcCCcc-----chhhhcccCCCCeeecCcceeeecCccCccccCceeeec-------C---------------
Q psy17821 29 HKPHCFELFTSGF-----EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS-------E--------------- 81 (194)
Q Consensus 29 ~g~i~feL~~~~~-----NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~-------g--------------- 81 (194)
.|+|+||||.+.+ ||++||+.+ +|+++.|||+ ++|||||+ |
T Consensus 187 ~G~I~IeL~~d~AP~Tv~NFl~L~~~G-----------fYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E 254 (369)
T 3rfy_A 187 DCVFRIVLDGYNAPVTAGNFVDLVERH-----------FYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTEKTRTVPLE 254 (369)
T ss_dssp EEEEEEEEETTTCHHHHHHHHHHHHTT-----------TTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCCCCCSSSSS
T ss_pred ceEEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCeeeee-CCeeEecCCCCCCCCCccCcccCcCcccCcc
Confidence 7999999999887 999999988 9999999999 99999986 1
Q ss_pred -------ccccc----------------CCCceeeccccc--CC---Ccccceee-------------ccceEEEeEEEc
Q psy17821 82 -------GKVVE----------------GKHTVYRMSAAT--AE---EKDEWIKC-------------LRVHVVFGHVVS 120 (194)
Q Consensus 82 -------~si~g----------------~~~~g~l~man~--g~---~sqf~i~l-------------~g~~vvFG~V~~ 120 (194)
.++|+ |+.+|++||||+ ++ +|||||++ |++|+|||+|++
T Consensus 255 ~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~Vve 334 (369)
T 3rfy_A 255 IMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTD 334 (369)
T ss_dssp SCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEE
T ss_pred ccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEec
Confidence 34553 678999999998 66 89999974 679999999999
Q ss_pred cHHHHHHhhcC
Q psy17821 121 GQNVVSHIENL 131 (194)
Q Consensus 121 G~dvv~~I~~~ 131 (194)
|||||++|++.
T Consensus 335 GmdVVdkI~~G 345 (369)
T 3rfy_A 335 NEDFLADLKVG 345 (369)
T ss_dssp STTGGGGCCTT
T ss_pred CHHHHHHHhCC
Confidence 99999999873
No 37
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.22 E-value=3.5e-07 Score=68.64 Aligned_cols=71 Identities=24% Similarity=0.407 Sum_probs=58.9
Q ss_pred CCCCCCCCeeeeecCCceeEecccc--CccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec-
Q psy17821 4 GDDRQVEPRGIIPLENIQVREVHDR--HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS- 80 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~~~~~~--~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~- 80 (194)
+|+++++|+|+|||++++|+.++.. .++.+|+||+.. ++.+.++|..|..++-+....+.|++++
T Consensus 46 Kd~~eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d------------~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ 113 (125)
T 1dyn_A 46 KDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTE------------QRNVYKDYRQLELACETQEEVDSWKASFL 113 (125)
T ss_dssp SSTTCSCEEEEEECTTEEEEECCSCSSSSCEEEEEEETT------------SSCSSTTCSSEEEEESSHHHHHHHHHHHH
T ss_pred cCCcccccceEEECCCceEeccCCCCCCCceEEEEECCC------------CccccccceEEEEeCCCHHHHHHHHHHHH
Confidence 5788999999999999999998764 678999999532 2345567779999999999999999988
Q ss_pred Cccccc
Q psy17821 81 EGKVVE 86 (194)
Q Consensus 81 g~si~g 86 (194)
..+||.
T Consensus 114 ra~v~p 119 (125)
T 1dyn_A 114 RAGVYP 119 (125)
T ss_dssp HTTCEE
T ss_pred hCccCc
Confidence 777763
No 38
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A
Probab=97.31 E-value=1.9e-05 Score=63.95 Aligned_cols=40 Identities=65% Similarity=0.995 Sum_probs=36.3
Q ss_pred CcCCCCchhhhhhcccccCCcccccccccCcccccccccc
Q psy17821 153 NLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKVR 192 (194)
Q Consensus 153 ~~l~p~~e~va~~L~~~e~l~k~~igd~~~e~~~~~~~~~ 192 (194)
.++.+.|.++|+||++.++|+|.+||+|||+.+++|.+||
T Consensus 38 ~~l~~~p~~iA~fL~~~~~l~k~~igeyLg~~~~~n~~vl 77 (203)
T 1r8s_E 38 ELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVL 77 (203)
T ss_dssp TSSCSSHHHHHHHHHHCTTCCHHHHHHHHTCCSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCcCcCHHHHHHHHhccchHHHHHH
Confidence 3445679999999999999999999999999999999987
No 39
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} SCOP: a.118.3.0 PDB: 3l8n_A 3swv_A
Probab=97.30 E-value=1.8e-05 Score=64.34 Aligned_cols=41 Identities=37% Similarity=0.638 Sum_probs=36.6
Q ss_pred CcCCCCchhhhhhcccccCCcccccccccCccccccccccC
Q psy17821 153 NLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKVRG 193 (194)
Q Consensus 153 ~~l~p~~e~va~~L~~~e~l~k~~igd~~~e~~~~~~~~~~ 193 (194)
.++.+.|.+||+||...++|+|.++|+|||+.+++|.+||.
T Consensus 44 g~i~~~p~~iA~FL~~~~~L~k~~igeyLg~~~~fn~~vL~ 84 (211)
T 3ltl_A 44 GMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMY 84 (211)
T ss_dssp TSSCSSHHHHHHHHHHCTTSCHHHHHHHHTCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCcCccHHHHHHHHhccchhHHHHHH
Confidence 34456799999999999999999999999999999999873
No 40
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=96.76 E-value=9.7e-05 Score=63.92 Aligned_cols=39 Identities=74% Similarity=1.107 Sum_probs=35.8
Q ss_pred cCCCCchhhhhhcccccCCcccccccccCcccccccccc
Q psy17821 154 LLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKVR 192 (194)
Q Consensus 154 ~l~p~~e~va~~L~~~e~l~k~~igd~~~e~~~~~~~~~ 192 (194)
++.+.|.++|+||+..++|+|.+||+|||+.+++|++||
T Consensus 41 ~~~~~~~~ia~fl~~~~~l~k~~ig~~l~~~~~~~~~vl 79 (347)
T 2r09_A 41 LLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVL 79 (347)
T ss_dssp SSCCSHHHHHHHHHHCTTCCHHHHHHHHHCCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCcCcCHHHHHHHhcCCCchHHHHH
Confidence 345679999999999999999999999999999999987
No 41
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=96.67 E-value=0.00093 Score=48.13 Aligned_cols=79 Identities=54% Similarity=1.005 Sum_probs=62.0
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCcc--chhhhcccCCCCeeecCcceeeecCccCccccCceeeecCc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGF--EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEG 82 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~--NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~ 82 (194)
++.+.+|+|.|+|.++.|....+..++.+|+|..... +.++.|+....|..+.+.+..|...+-+..+...|++++..
T Consensus 38 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~ 117 (127)
T 1fgy_A 38 YTTDKEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKA 117 (127)
T ss_dssp STTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCCcceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHH
Confidence 4567899999999999998888778889999986543 56777877767777776666777788888888889887643
Q ss_pred c
Q psy17821 83 K 83 (194)
Q Consensus 83 s 83 (194)
.
T Consensus 118 ~ 118 (127)
T 1fgy_A 118 S 118 (127)
T ss_dssp H
T ss_pred H
Confidence 3
No 42
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=96.28 E-value=0.00076 Score=50.48 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=50.2
Q ss_pred CCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcccc
Q psy17821 8 QVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGKVV 85 (194)
Q Consensus 8 ~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~si~ 85 (194)
+++|.|+|||++..|+..+.+..+.+|+|+... .|. .|...+.++.....|++.+..++.
T Consensus 53 ~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~-------~G~-----------~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 53 KSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPD-------KGN-----------VYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp CSSCSEEEECTTCEEECCCCTTSTTEEEEECTT-------SCS-----------EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccCCCceEEeCCCEEEecCCCCCCCEEEEeeCC-------CCC-----------EEEEeCCCHHHHHHHHHHHHHHHh
Confidence 569999999999999988888889999999543 122 799999999999999998866553
No 43
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=96.23 E-value=0.002 Score=55.67 Aligned_cols=80 Identities=54% Similarity=1.015 Sum_probs=66.0
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCcc--chhhhcccCCCCeeecCcceeeecCccCccccCceeeecCc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGF--EFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEG 82 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~--NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~ 82 (194)
++.+.+|+|.|+|.++.|..+....++.+|+|..... ..++.|+..+.|.++.+.+..|..++-+..+...|++++..
T Consensus 246 ~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ 325 (347)
T 2r09_A 246 YTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKA 325 (347)
T ss_dssp STTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHH
T ss_pred CCCccCCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHH
Confidence 4567899999999999998887777889999986533 56788988888888888777888899999999999998754
Q ss_pred cc
Q psy17821 83 KV 84 (194)
Q Consensus 83 si 84 (194)
.+
T Consensus 326 ai 327 (347)
T 2r09_A 326 SI 327 (347)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 44
>1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B
Probab=95.46 E-value=0.00093 Score=58.16 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=33.0
Q ss_pred CCchhhhhhccc-ccCCcccccccccCccccccccccC
Q psy17821 157 PTEMGVAQFLYK-GEGLNKTAIGDYLGERHDFNEKVRG 193 (194)
Q Consensus 157 p~~e~va~~L~~-~e~l~k~~igd~~~e~~~~~~~~~~ 193 (194)
+.|.++|+||.+ .++|+|.+||+|||+.+++|.+||.
T Consensus 39 ~~p~~IA~FL~~~~~~LdK~~IGeyLg~~~~~n~~VL~ 76 (356)
T 1xsz_A 39 SPNEEIAEFFHQQRKNLDLEAVGDYLSSPEAENQQVLK 76 (356)
T ss_dssp CHHHHHHHHHHHTTTTSCHHHHHHHHTCCSHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCHHHHHHHHcCCchHHHHHHH
Confidence 457899999987 6899999999999999999999873
No 45
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.17 E-value=0.0072 Score=44.90 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=52.1
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhh---hcccCCCCeeecCcc-eeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIK---ACKTDSEGKVVEGKH-TVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~---Lc~~~~~g~~v~g~~-~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+.+|+|.|+|++..|........+.+|+|+......+. -|+++..|.++++.+ .+|..++-+......||.++
T Consensus 40 ~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai 119 (130)
T 1v88_A 40 TQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDAL 119 (130)
T ss_dssp CSSSCCCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHH
T ss_pred CCCCCCceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHH
Confidence 45678999999999999865555455699999854321222 234444455555543 34667777788888898876
Q ss_pred Ccc
Q psy17821 81 EGK 83 (194)
Q Consensus 81 g~s 83 (194)
..+
T Consensus 120 ~~a 122 (130)
T 1v88_A 120 ELA 122 (130)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 46
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B*
Probab=93.73 E-value=0.0071 Score=49.62 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=28.2
Q ss_pred CCchhhhhhcccc-cCCcccccccccCcccccccccc
Q psy17821 157 PTEMGVAQFLYKG-EGLNKTAIGDYLGERHDFNEKVR 192 (194)
Q Consensus 157 p~~e~va~~L~~~-e~l~k~~igd~~~e~~~~~~~~~ 192 (194)
+.|.++|+||.++ ++|+|.+||+|||+ +.|.+||
T Consensus 54 ~~~~~iA~fL~~~~~~L~k~~iGeyLg~--~~n~~vL 88 (230)
T 1ku1_A 54 DSDKDIAEFLFNNNNRMNKKTIGLLLCH--PDKVSLL 88 (230)
T ss_dssp SSHHHHHHHHHHTTTTSCHHHHHHHHTC--GGGHHHH
T ss_pred CCHHHHHHHHHHcCcccCHHHHHHHHcC--ccHHHHH
Confidence 5689999999876 47999999999996 4567765
No 47
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.84 E-value=0.044 Score=39.65 Aligned_cols=58 Identities=19% Similarity=0.315 Sum_probs=42.2
Q ss_pred CCCCCCCCeeeeecCCceeEe---ccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 4 GDDRQVEPRGIIPLENIQVRE---VHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~~---~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
+++.|..|.|.|||++..|.. .....++.+|+|.... ..|..++-++...+.|+..+
T Consensus 42 k~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~--------------------~~y~f~A~s~e~~~~Wl~al 101 (112)
T 2coc_A 42 GGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAK--------------------QSWYLSASSAELQQQWLETL 101 (112)
T ss_dssp CCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETT--------------------EEEEEEESSHHHHHHHHHHH
T ss_pred CCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecCC--------------------eEEEEEcCCHHHHHHHHHHH
Confidence 356788999999999999984 2334467899987322 15777777777777787765
Q ss_pred C
Q psy17821 81 E 81 (194)
Q Consensus 81 g 81 (194)
.
T Consensus 102 ~ 102 (112)
T 2coc_A 102 S 102 (112)
T ss_dssp H
T ss_pred H
Confidence 3
No 48
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.70 E-value=0.048 Score=40.63 Aligned_cols=58 Identities=12% Similarity=0.265 Sum_probs=43.5
Q ss_pred CCCCCCCCeeeeecCCceeEecc----ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeee
Q psy17821 4 GDDRQVEPRGIIPLENIQVREVH----DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKY 79 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~~~~----~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg 79 (194)
-++.+.+|.|.|+|++.+|..++ ...+++.|++.... + .|..++-.......||++
T Consensus 45 ~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~------------------~--ty~~~Adseee~~~WikA 104 (126)
T 1wi1_A 45 YREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEG------------------D--TVIFASDDEQDRILWVQA 104 (126)
T ss_dssp CCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSS------------------C--EEEEECSSHHHHHHHHHH
T ss_pred ccccCCCCceEEECCCcEEEEecCCcccccCceEEEEecCC------------------c--eEEEEcCCHHHHHHHHHH
Confidence 36778999999999999987652 13477888866432 1 466777788889999998
Q ss_pred cC
Q psy17821 80 SE 81 (194)
Q Consensus 80 ~g 81 (194)
+.
T Consensus 105 i~ 106 (126)
T 1wi1_A 105 MY 106 (126)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 49
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.75 E-value=0.15 Score=35.66 Aligned_cols=61 Identities=28% Similarity=0.473 Sum_probs=40.8
Q ss_pred CCCCCCCeeeeecCCceeEeccc---cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHD---RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~---~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.|..+.. ...+.+|+|.... .. .|...+-+..+...|++++.
T Consensus 45 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~--------~r-----------~~~l~a~s~~e~~~Wi~al~ 105 (117)
T 2d9y_A 45 DEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAG--------VR-----------TYFFSAESPEEQEAWIQAMG 105 (117)
T ss_dssp STTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSS--------SC-----------EEEEECSSHHHHHHHHHHHH
T ss_pred CCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCC--------Cc-----------EEEEEcCCHHHHHHHHHHHH
Confidence 45677999999999998866532 3456788874211 00 46666667777888888765
Q ss_pred ccc
Q psy17821 82 GKV 84 (194)
Q Consensus 82 ~si 84 (194)
..+
T Consensus 106 ~~~ 108 (117)
T 2d9y_A 106 EAA 108 (117)
T ss_dssp HTT
T ss_pred HHH
Confidence 444
No 50
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=88.79 E-value=0.14 Score=35.63 Aligned_cols=61 Identities=23% Similarity=0.378 Sum_probs=41.8
Q ss_pred CCCCCCCeeeeecCCceeEeccccC-ccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRH-KPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGK 83 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~-g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~s 83 (194)
++.+..|.|.|+|.+..+....+.. .+.+|+|.... ...|..++-+......|++++...
T Consensus 41 ~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~-------------------~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 41 ASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKG-------------------MVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp CTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETT-------------------EEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCC-------------------CeEEEEECCCHHHHHHHHHHHHHH
Confidence 4567899999999999987766543 44888886321 014666666677777888776443
Q ss_pred c
Q psy17821 84 V 84 (194)
Q Consensus 84 i 84 (194)
+
T Consensus 102 ~ 102 (109)
T 1wgq_A 102 T 102 (109)
T ss_dssp H
T ss_pred h
Confidence 3
No 51
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=88.15 E-value=0.13 Score=37.62 Aligned_cols=58 Identities=9% Similarity=0.129 Sum_probs=38.5
Q ss_pred CCCCCeeeeecCCceeEecc-ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcc
Q psy17821 7 RQVEPRGIIPLENIQVREVH-DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGK 83 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~-~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~s 83 (194)
.+..|.|.|+|.++.|.... ...++.+|+|.... +. .|...+-+..+...||+.+...
T Consensus 64 ~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~--------~~-----------~yl~qA~s~~e~~~Wi~aI~~~ 122 (129)
T 2p0d_A 64 AGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIP--------GH-----------EFLLQSDHETELRAWHRALRTV 122 (129)
T ss_dssp ---CCSEEEECTTCEEEECTTSCSSSSEEEEECTT--------SC-----------EEEEECSCHHHHHHHHHHHHHH
T ss_pred cCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCC--------CC-----------EEEEECCCHHHHHHHHHHHHHH
Confidence 46799999999999987753 34566899987432 00 4556666677777787765433
No 52
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=88.12 E-value=0.15 Score=35.59 Aligned_cols=66 Identities=20% Similarity=0.490 Sum_probs=40.5
Q ss_pred CCCCCCCeeeeecCCceeEecc---ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVH---DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~---~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.|..+. ...++.+|+|.....+ .+......|...+-+......|++++.
T Consensus 41 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~------------~~~~~~~~~~l~a~s~~e~~~Wi~al~ 108 (118)
T 1v89_A 41 DEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWD------------QNRMGQDSYVLMASSQAEMEEWVKFLR 108 (118)
T ss_dssp SSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCS------------SCCSSCCCEEEECSSHHHHHHHHHHHH
T ss_pred CCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccc------------cccCCCcEEEEECCCHHHHHHHHHHHH
Confidence 4566899999999999887654 2345688888752100 000011145556666677777877654
Q ss_pred c
Q psy17821 82 G 82 (194)
Q Consensus 82 ~ 82 (194)
.
T Consensus 109 ~ 109 (118)
T 1v89_A 109 R 109 (118)
T ss_dssp H
T ss_pred H
Confidence 3
No 53
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=87.76 E-value=0.15 Score=36.90 Aligned_cols=59 Identities=20% Similarity=0.225 Sum_probs=40.7
Q ss_pred CCCeeeeecCCceeEeccc--cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCccc
Q psy17821 9 VEPRGIIPLENIQVREVHD--RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGKV 84 (194)
Q Consensus 9 ~~p~G~i~l~~~~v~~~~~--~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~si 84 (194)
..|+|.|+|.++.|....+ ..++.+|+|.....+ +..|..++-+..+...||+++..++
T Consensus 58 ~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~-----------------~~~~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 58 SLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQG-----------------DPPVEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp CSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC-------------------CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred CccccEEECCCCEEEEccCCcCCCCEEEEEECCCCC-----------------CceEEEEECCHHHHHHHHHHHHHHH
Confidence 5679999999999988765 457799999753310 1145566666677778888765443
No 54
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.41 E-value=0.22 Score=36.69 Aligned_cols=55 Identities=25% Similarity=0.394 Sum_probs=41.0
Q ss_pred CCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 8 QVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 8 ~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
+..|+|.|+|.++.+.......++.+|+|..... ..|...+-.......|++++.
T Consensus 66 ~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~-------------------r~~~l~A~s~~e~~~Wi~al~ 120 (150)
T 1wg7_A 66 SKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDK-------------------SSYLLAADSEVEMEEWITILN 120 (150)
T ss_dssp SSCCSEEECTTTCCEECCCCSSCTTEEEEECSSS-------------------CEEEEECSSHHHHHHHHHHHH
T ss_pred CCCcCcEEecccCEEEecCCCCCceEEEEEeCCC-------------------cEEEEEeCCHHHHHHHHHHHH
Confidence 6789999999998887766556778999875320 056666777777888888763
No 55
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=86.33 E-value=0.25 Score=35.05 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=42.5
Q ss_pred CCCCCCCCeeeeecCCceeE---eccccCccEEEEEcC-CccchhhhcccCCCCeeecCcceeeecCccCccccCceeee
Q psy17821 4 GDDRQVEPRGIIPLENIQVR---EVHDRHKPHCFELFT-SGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKY 79 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~---~~~~~~g~i~feL~~-~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg 79 (194)
+++.+..|.|.|+|.+..+. ......++.+|+|.. +. . .|..++-+..+.+.||+.
T Consensus 36 k~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~---------~-----------~y~f~A~s~ee~~~Wi~a 95 (112)
T 3cxb_B 36 PDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDR---------P-----------CLELSAESEAEMAEWMQH 95 (112)
T ss_dssp SSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTS---------C-----------CEEEECSSHHHHHHHHHH
T ss_pred CCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCC---------C-----------EEEEEcCCHHHHHHHHHH
Confidence 45677899999999987654 335556779999873 22 1 566777777888888887
Q ss_pred cCccc
Q psy17821 80 SEGKV 84 (194)
Q Consensus 80 ~g~si 84 (194)
+..++
T Consensus 96 i~~~~ 100 (112)
T 3cxb_B 96 LCQAV 100 (112)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 64443
No 56
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=84.86 E-value=0.26 Score=37.26 Aligned_cols=58 Identities=10% Similarity=0.214 Sum_probs=41.5
Q ss_pred CCCCCCCCeeeeecCCceeEecccc--CccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 4 GDDRQVEPRGIIPLENIQVREVHDR--HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~~~~~~--~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
+++.+..|.|.|+|.+..+.....+ ..+.+|+|.+.. . .|..++-+......||+++.
T Consensus 50 k~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~---------r-----------~~~f~A~s~ee~~eWi~aI~ 109 (149)
T 1x1f_A 50 TDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPK---------E-----------EVQLKTENTESGEEWRGFIL 109 (149)
T ss_dssp SCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSS---------C-----------CEEEECSSHHHHHHHHHHHH
T ss_pred eCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcCC---------C-----------EEEEEcCCHHHHHHHHHHHH
Confidence 4667889999999999887643322 235678776422 1 56777888888899999874
No 57
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=84.72 E-value=0.3 Score=34.69 Aligned_cols=57 Identities=28% Similarity=0.419 Sum_probs=38.3
Q ss_pred CCCCCCCeeeeecCCceeEe-ccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVRE-VHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~-~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.+.. ......+.+|+|.... . .|...+-+......|++++.
T Consensus 51 ~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~Wi~al~ 108 (126)
T 1fao_A 51 DQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPF---------R-----------TFYLCAKTGVEADEWIKILR 108 (126)
T ss_dssp STTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEETT---------E-----------EEEEECSSHHHHHHHHHHHH
T ss_pred CCCCCCceeEEEccceEEEEecccCCCCCEEEEEeCC---------c-----------EEEEECCCHHHHHHHHHHHH
Confidence 45678999999999988544 3344556888886432 0 45555666667777777653
No 58
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=83.98 E-value=1.2 Score=30.16 Aligned_cols=35 Identities=29% Similarity=0.619 Sum_probs=26.2
Q ss_pred CCCCCCCeeeeecCCceeEecc----ccCccEEEEEcCC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVH----DRHKPHCFELFTS 39 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~----~~~g~i~feL~~~ 39 (194)
++.+..|+|.|+|.++.+.... ...++.+|+|...
T Consensus 40 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~ 78 (108)
T 1u5d_A 40 NEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQ 78 (108)
T ss_dssp STTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECS
T ss_pred CCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcC
Confidence 4557899999999999987752 3345678888743
No 59
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=83.96 E-value=0.31 Score=33.98 Aligned_cols=60 Identities=17% Similarity=0.341 Sum_probs=38.5
Q ss_pred CCCCCCCeeeeecCCceeEeccc--------cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCce
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHD--------RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEW 76 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~--------~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~ 76 (194)
++.+.+|+|.|+|.++.+....+ ..++.+|+|.... . .|...+-+......|
T Consensus 43 ~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~W 102 (117)
T 1v5u_A 43 HRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTR---------R-----------VYNFCAQDVPSAQQW 102 (117)
T ss_dssp SSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESS---------C-----------EEEEECSSHHHHHHH
T ss_pred cCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEECCC---------c-----------eEEEECCCHHHHHHH
Confidence 45567899999999987655432 1233566664322 1 455566777778888
Q ss_pred eeecCccc
Q psy17821 77 IKYSEGKV 84 (194)
Q Consensus 77 iqg~g~si 84 (194)
++++...+
T Consensus 103 i~al~~~i 110 (117)
T 1v5u_A 103 VDRIQSCL 110 (117)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 88765544
No 60
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.72 E-value=0.54 Score=33.31 Aligned_cols=56 Identities=20% Similarity=0.238 Sum_probs=38.4
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.+.... ...+.+|+|.... . .|...+-+..+...|++++.
T Consensus 45 ~~~~~~~~g~I~L~~~~~~~~~-~~~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~Wi~al~ 100 (119)
T 2dhk_A 45 TAQDANPLDSIDLSSAVFDCKA-DAEEGIFEIKTPS---------R-----------VITLKAATKQAMLYWLQQLQ 100 (119)
T ss_dssp STTCCSCSEEEEGGGCEEEECT-TGGGCEEEEECSS---------C-----------CEEEECSSHHHHHHHHHHHH
T ss_pred CCCCcccccEEECCCCEEEecC-CCCCCEEEEEeCC---------c-----------EEEEECCCHHHHHHHHHHHH
Confidence 4566799999999998876532 2345677776432 0 46666667777888888764
No 61
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=78.71 E-value=2.3 Score=28.87 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=25.0
Q ss_pred CCCCCCCeeeeecCCceeEecccc------CccEEEEEcCC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDR------HKPHCFELFTS 39 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~------~g~i~feL~~~ 39 (194)
++.+..|+|.|+|.++.|..+... ..+.+|+|...
T Consensus 42 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~ 82 (109)
T 2i5f_A 42 PAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITA 82 (109)
T ss_dssp TTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECT
T ss_pred CCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeC
Confidence 456789999999999888665433 25578887743
No 62
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=76.32 E-value=3 Score=29.37 Aligned_cols=58 Identities=31% Similarity=0.506 Sum_probs=39.1
Q ss_pred CCCCCCCeeeeecCCceeEecccc------CccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceee
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDR------HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIK 78 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~------~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iq 78 (194)
++.+..|+|.|+|.++.|..+... ..+.+|+|.... . ..|...+-.......|++
T Consensus 53 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~---------~----------~~~~l~a~s~~e~~~Wi~ 113 (129)
T 1x05_A 53 PAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD---------E----------VHYFLQAATPKERTEWIK 113 (129)
T ss_dssp SSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTT---------C----------CCCEEECSSHHHHHHHHH
T ss_pred CCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCC---------C----------CEEEEECCCHHHHHHHHH
Confidence 456789999999999888765443 256788887532 0 035555666667777887
Q ss_pred ecC
Q psy17821 79 YSE 81 (194)
Q Consensus 79 g~g 81 (194)
++.
T Consensus 114 al~ 116 (129)
T 1x05_A 114 AIQ 116 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 63
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=75.81 E-value=1.3 Score=32.15 Aligned_cols=56 Identities=18% Similarity=0.362 Sum_probs=37.2
Q ss_pred CCCCCCeeeeecCCc-eeEecc---ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 6 DRQVEPRGIIPLENI-QVREVH---DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 6 ~~~~~p~G~i~l~~~-~v~~~~---~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
+.+.+|+|.|+|..+ .|.... .+.++++|.+.+.. ..|..++-.......||.++.
T Consensus 57 ~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~--------------------r~y~l~A~s~~e~~~Wi~al~ 116 (126)
T 1v5p_A 57 AVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALS--------------------QRYFLQANDQKDLKDWVEALN 116 (126)
T ss_dssp CTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSS--------------------CEEEEECSSHHHHHHHHHHHH
T ss_pred CCCceeeEEEECCCccEEecCCcccCCCCCEEEEEECCC--------------------EEEEEECCCHHHHHHHHHHHH
Confidence 567899999999984 444433 23445677654321 157777777778888888753
No 64
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=75.69 E-value=0.83 Score=32.87 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=38.1
Q ss_pred CCeeeeecCCceeEec--cccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCc
Q psy17821 10 EPRGIIPLENIQVREV--HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEG 82 (194)
Q Consensus 10 ~p~G~i~l~~~~v~~~--~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~ 82 (194)
.|.+.|+|.++.|... +.+.++.+|+|.... +. .|...+-++.+...||+.+..
T Consensus 65 ~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~--------~~-----------~ylfqA~s~~e~~~Wi~aI~~ 120 (124)
T 3pp2_A 65 TPEYTVELRGATLSWAPKDKSSRKNVLELRSRD--------GS-----------EYLIQHDSEAIISTWHKAIAQ 120 (124)
T ss_dssp SEEEEEECTTCEEEECCGGGCSSSSEEEEECTT--------SC-----------EEEEECSCHHHHHHHHHHHHH
T ss_pred CCcceEEcCCCEEEecccccCCCceEEEEECCC--------CC-----------EEEEECCCHHHHHHHHHHHHH
Confidence 6899999999988876 456678999987422 11 455666666777777766543
No 65
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=74.27 E-value=2.8 Score=28.79 Aligned_cols=60 Identities=22% Similarity=0.377 Sum_probs=40.4
Q ss_pred CCCCCCCeeeeecCCceeEe--ccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCc
Q psy17821 5 DDRQVEPRGIIPLENIQVRE--VHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEG 82 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~--~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~ 82 (194)
++.+..|+|.|+|.++.+.. .....++.+|+|.... ...|...+-+......|++++..
T Consensus 38 ~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~-------------------~r~~~l~a~s~~e~~~Wi~ai~~ 98 (113)
T 1pls_A 38 KKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTK-------------------QQDHFFQAAFLEERDAWVRDINK 98 (113)
T ss_dssp STTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETT-------------------TEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCC-------------------CCEEEEECCCHHHHHHHHHHHHH
Confidence 45678999999999998864 2334556788886321 01455666667777888887643
Q ss_pred c
Q psy17821 83 K 83 (194)
Q Consensus 83 s 83 (194)
.
T Consensus 99 ~ 99 (113)
T 1pls_A 99 A 99 (113)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.32 E-value=1.3 Score=30.44 Aligned_cols=56 Identities=23% Similarity=0.346 Sum_probs=36.3
Q ss_pred CCCCCCCeeeeecCCce-eEeccc-cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQ-VREVHD-RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~-v~~~~~-~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+..|+|.|+|.++. |....+ ...+.+|+|.... . .|...+-+..+...|++++
T Consensus 41 ~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~Wi~ai 98 (115)
T 2dn6_A 41 SEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFD---------K-----------TFEISASDKKKKQEWIQAI 98 (115)
T ss_dssp STTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSS---------C-----------EEEEECSSHHHHHHHHHHH
T ss_pred CCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCC---------C-----------EEEEEcCCHHHHHHHHHHH
Confidence 45678999999999864 544433 2345677775432 1 4555566667777888775
No 67
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=73.06 E-value=3.4 Score=29.75 Aligned_cols=62 Identities=16% Similarity=0.246 Sum_probs=39.9
Q ss_pred CCCCCCeeeeecCCceeEeccccC---------ccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCce
Q psy17821 6 DRQVEPRGIIPLENIQVREVHDRH---------KPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEW 76 (194)
Q Consensus 6 ~~~~~p~G~i~l~~~~v~~~~~~~---------g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~ 76 (194)
+.+..|.|.|+|+++.|....... ....|+|...... .+.+.+ .|...+-+..+...|
T Consensus 43 ~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~------------~~~~~~-~y~f~A~s~~e~~~W 109 (120)
T 4a6h_A 43 KKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNG------------IIRRGH-NWVFKADSYESMMSW 109 (120)
T ss_dssp TTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSS------------SSCTTC-EEEEECSSHHHHHHH
T ss_pred CcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCC------------cccCce-EEEEEcCCHHHHHHH
Confidence 347789999999999998865432 4566776643311 111111 677777777788888
Q ss_pred eeec
Q psy17821 77 IKYS 80 (194)
Q Consensus 77 iqg~ 80 (194)
++.+
T Consensus 110 v~aI 113 (120)
T 4a6h_A 110 FDNL 113 (120)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 68
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=72.93 E-value=1.5 Score=34.80 Aligned_cols=58 Identities=24% Similarity=0.614 Sum_probs=38.7
Q ss_pred CCCCCCCeeeeecCCceeEecc----ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQVREVH----DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~----~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+..|+|.|+|.++.+.... ...++.+|+|.... . ..|..++-.......|++++
T Consensus 143 ~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~---------~----------r~~~l~A~s~~e~~~Wi~aL 203 (211)
T 1u5e_A 143 SDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD---------K----------RIYQFTAASPKDAEEWVQQL 203 (211)
T ss_dssp STTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSS---------S----------CEEEEECSSHHHHHHHHHHH
T ss_pred CCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCC---------C----------CEEEEEcCCHHHHHHHHHHH
Confidence 4556789999999999987642 23446788887431 0 04555666666777777765
Q ss_pred C
Q psy17821 81 E 81 (194)
Q Consensus 81 g 81 (194)
.
T Consensus 204 ~ 204 (211)
T 1u5e_A 204 K 204 (211)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=72.65 E-value=1.1 Score=30.41 Aligned_cols=55 Identities=18% Similarity=0.338 Sum_probs=36.0
Q ss_pred CCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCccc
Q psy17821 9 VEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGKV 84 (194)
Q Consensus 9 ~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~si 84 (194)
..|+|.|+|.++.|....+ ....|+|.... . ..|...+-+..+...|++++..++
T Consensus 38 ~~~~g~i~L~~~~v~~~~~--~~~~F~i~~~~---------~----------r~~~l~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 38 KGSKGSIKMAVCEIKVHSA--DNTRMELIIPG---------E----------QHFYMKAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp CCCSCEEEGGGCEEECCTT--CSSEEEEEETT---------T----------EEEEEECSSHHHHHHHHHHHHTTS
T ss_pred CCcccEEEeeeeEEEEcCC--CCceEEEEeCC---------C----------CEEEEECCCHHHHHHHHHHHHHHH
Confidence 4699999999888765433 34566665321 0 156666777777888888764443
No 70
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.67 E-value=4.1 Score=28.22 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=24.5
Q ss_pred CCCCCCCeeeeecCCceeEeccc---cCccEEEEEc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHD---RHKPHCFELF 37 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~---~~g~i~feL~ 37 (194)
++.+..|+|.|+|.++.|..+.. ..++.+|+|.
T Consensus 56 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~ 91 (122)
T 2yry_A 56 DEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAE 91 (122)
T ss_dssp STTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEE
T ss_pred CCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEe
Confidence 45678999999999988766532 3456788885
No 71
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=70.67 E-value=4.4 Score=28.07 Aligned_cols=60 Identities=22% Similarity=0.345 Sum_probs=40.5
Q ss_pred CCCCCCCeeeeecCCceeEeccc---cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHD---RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~---~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.|..... ...+++|++..... . .|...+-+......|++++.
T Consensus 45 ~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~--------r-----------~~~l~a~s~~e~~~Wi~al~ 105 (123)
T 1upq_A 45 DSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGM--------R-----------TYVLAADTLEDLRGWLRALG 105 (123)
T ss_dssp STTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTS--------C-----------CEEEECSSHHHHHHHHHHHH
T ss_pred CCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCC--------e-----------EEEEECCCHHHHHHHHHHHH
Confidence 45678999999999998877642 23568888764220 0 45555666677778888764
Q ss_pred cc
Q psy17821 82 GK 83 (194)
Q Consensus 82 ~s 83 (194)
..
T Consensus 106 ~a 107 (123)
T 1upq_A 106 RA 107 (123)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 72
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=69.98 E-value=1.4 Score=36.28 Aligned_cols=58 Identities=26% Similarity=0.400 Sum_probs=41.8
Q ss_pred CCCCCeeeeecCCceeEecc-ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcc
Q psy17821 7 RQVEPRGIIPLENIQVREVH-DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGK 83 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~-~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~s 83 (194)
.+..|.|.|+|.+..|.... .+.++.+|+|.... +. .|..++-+......||+.+...
T Consensus 64 ~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~--------~r-----------~y~f~A~s~ee~~~Wi~aI~~a 122 (263)
T 3a8p_A 64 QNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSC--------GD-----------VYLFQATSQTDLENWVTAIHSA 122 (263)
T ss_dssp --CCCSEEEECTTCEEEECTTCSSCSSEEEEECTT--------SC-----------EEEEECSSHHHHHHHHHHHHHH
T ss_pred cccCccceEEcCCcEEEECCcCCCCCCEEEEEcCC--------Cc-----------EEEEEcCCHHHHHHHHHHHHHH
Confidence 56789999999998887654 34567999987521 01 5777788888889999987433
No 73
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=68.56 E-value=1.5 Score=38.00 Aligned_cols=57 Identities=25% Similarity=0.341 Sum_probs=44.2
Q ss_pred CCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 7 RQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
.+..|.++|+|..++|+......+++||+|.... +...|..++-.......||+++.
T Consensus 338 ~~~~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~------------------~~~~~~l~A~s~~e~~~Wi~ai~ 394 (407)
T 4h8s_A 338 GAVAGGLIQDLDNCSVMAVDCEDRRYCFQITTPN------------------GKSGIILQAESRKENEEWICAIN 394 (407)
T ss_dssp TCSSCCCCBCSSCCEEEEECCTTCSSEEEEECTT------------------SSCCEEEECSSSHHHHHHHHHHH
T ss_pred CCCCCCeEEECCceEEEECCCCCCCceEEEEecC------------------CCceEEEEcCCHHHHHHHHHHHH
Confidence 4567889999999999988888889999997532 11157777888888889998764
No 74
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=67.65 E-value=5.6 Score=28.84 Aligned_cols=61 Identities=23% Similarity=0.554 Sum_probs=41.4
Q ss_pred CCCCCCCeeeeecCCceeEecc----ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQVREVH----DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~----~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+..|+|.|+|.++.|.... ...++.+|+|.... . ..|...+-+......|++++
T Consensus 54 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~---------~----------r~~~l~a~s~~e~~~Wi~al 114 (148)
T 1u5f_A 54 SDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD---------K----------RIYQFTAASPKDAEEWVQQL 114 (148)
T ss_dssp STTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTT---------S----------CEEEEECSSHHHHHHHHHHH
T ss_pred CCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCC---------C----------cEEEEECCCHHHHHHHHHHH
Confidence 4566899999999999887543 33445788887431 0 04666666777788888876
Q ss_pred Cccc
Q psy17821 81 EGKV 84 (194)
Q Consensus 81 g~si 84 (194)
...+
T Consensus 115 ~~~i 118 (148)
T 1u5f_A 115 KFIL 118 (148)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 4433
No 75
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=66.50 E-value=1.6 Score=30.51 Aligned_cols=59 Identities=25% Similarity=0.472 Sum_probs=38.3
Q ss_pred CCCCCCCeeeeecCCceeEec-c---ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQVREV-H---DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~-~---~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+.+|+|.|+|.++..... . ....+.+|+|.... . .|...+-+......|++++
T Consensus 47 ~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~W~~al 106 (125)
T 1eaz_A 47 SELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS---------R-----------TFYVQADSPEEMHSWIKAV 106 (125)
T ss_dssp STTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS---------C-----------EEEEECSSHHHHHHHHHHH
T ss_pred CCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCC---------c-----------EEEEEcCCHHHHHHHHHHH
Confidence 455689999999999764332 1 22456788877432 1 4556666677778888876
Q ss_pred Ccc
Q psy17821 81 EGK 83 (194)
Q Consensus 81 g~s 83 (194)
...
T Consensus 107 ~~~ 109 (125)
T 1eaz_A 107 SGA 109 (125)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 76
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=65.96 E-value=2.3 Score=28.32 Aligned_cols=52 Identities=17% Similarity=0.336 Sum_probs=33.3
Q ss_pred CCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 7 RQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
....|.|.|+|.++.+... +..+..|++.... ..|...+-+..+...|++++
T Consensus 38 ~~~~~~~~i~l~~~~~~~~--~~~~~~F~i~~~~--------------------r~~~l~A~s~~e~~~Wi~aL 89 (94)
T 2rsg_A 38 TEYGCRGSICLSKAVITPH--DFDECRFDISVND--------------------SVWYLRAQDPDHRQQWIDAI 89 (94)
T ss_dssp GGTCCSEEEETTTCEEEEC--SSCSSEEEEEETT--------------------EEEEEECCSSCCTHHHHHHH
T ss_pred ccccceeeEecceeeeecC--cccceeEEEEeCC--------------------eEEEEECCCHHHHHHHHHHH
Confidence 3457999999999877543 3455677765322 04555566666677777654
No 77
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=65.96 E-value=0.21 Score=35.62 Aligned_cols=61 Identities=21% Similarity=0.346 Sum_probs=37.7
Q ss_pred CCCCCCCeeeeecCCceeEec----cccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeec
Q psy17821 5 DDRQVEPRGIIPLENIQVREV----HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYS 80 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~----~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~ 80 (194)
++.+..|+|.|||..+.+..+ .+..++.+|+|..... .....|...+-+..+...|++++
T Consensus 42 ~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~----------------~~~~~~~~~a~s~~e~~~Wi~al 105 (125)
T 1unq_A 42 ERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW----------------TTVIERTFHVETPEEREEWTTAI 105 (125)
T ss_dssp SCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEET----------------TEEEEEEEECSSHHHHHHHHHHH
T ss_pred CCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCC----------------CCceeEEEEeCCHHHHHHHHHHH
Confidence 445667999999998876432 2335567888763110 00114555667777788888876
Q ss_pred C
Q psy17821 81 E 81 (194)
Q Consensus 81 g 81 (194)
.
T Consensus 106 ~ 106 (125)
T 1unq_A 106 Q 106 (125)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=65.44 E-value=0.97 Score=34.54 Aligned_cols=19 Identities=32% Similarity=0.443 Sum_probs=15.2
Q ss_pred CCCCCCeeeeecCCceeEe
Q psy17821 6 DRQVEPRGIIPLENIQVRE 24 (194)
Q Consensus 6 ~~~~~p~G~i~l~~~~v~~ 24 (194)
+.+.+|+|.|+|.++.++.
T Consensus 46 ~~~~~~~G~I~L~~~~~ve 64 (169)
T 1btk_A 46 GRRGSKKGSIDVEKITCVE 64 (169)
T ss_dssp TEEEEEEEEEEGGGEEEEE
T ss_pred CCCCceeeEEECcceEEEE
Confidence 4577999999999987543
No 79
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=64.70 E-value=6 Score=27.58 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=39.3
Q ss_pred CCCCCCCeeeeecCCceeEeccc---cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHD---RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~---~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
++.+..|+|.|+|.++.|..... ..++.+|+|..... . .|...+-+..+...|++.+.
T Consensus 55 ~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~--------r-----------~~~l~a~s~~e~~~Wi~al~ 115 (128)
T 2dkp_A 55 DEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNM--------R-----------TYYFCTDTGKEMELWMKAML 115 (128)
T ss_dssp STTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSS--------C-----------CEEEECSSHHHHHHHHHHHH
T ss_pred CCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCC--------C-----------EEEEEcCCHHHHHHHHHHHH
Confidence 45678999999999988877542 24567888864320 0 45555666677777887763
No 80
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=64.25 E-value=2.3 Score=36.45 Aligned_cols=58 Identities=17% Similarity=0.304 Sum_probs=43.6
Q ss_pred CCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCc
Q psy17821 7 RQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEG 82 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~ 82 (194)
.+..|.|.|+|..++|+......++.+|+|.+.. .+..|..++-+......||+++..
T Consensus 315 ~~~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~------------------~~~~~~l~A~s~~e~~~Wi~ai~~ 372 (385)
T 2q13_A 315 GDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFD------------------GKKSSILQAESKKDHEEWICTINN 372 (385)
T ss_dssp SCSSCEEEEECTTCEEEEECCTTCSSEEEEECTT------------------SCBCCCEECSSHHHHHHHHHHHHH
T ss_pred CCcCCCceEEccceEEEeccccCCCceEEEEeCC------------------CCeEEEEEeCCHHHHHHHHHHHHH
Confidence 3567999999999999888777788999987432 001577777777888889887643
No 81
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=61.95 E-value=2.2 Score=29.57 Aligned_cols=56 Identities=25% Similarity=0.528 Sum_probs=35.4
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGK 83 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~s 83 (194)
++.+..|+|.|+|.++...... ++.+|+|.... . .|...+-+..+...|++++...
T Consensus 42 ~~~~~~~~g~i~l~~~~~v~~~---~~~~F~i~~~~---------r-----------~~~l~a~s~~e~~~Wi~~l~~~ 97 (115)
T 2cod_A 42 NEKEMYSKGIIPLSAISTVRVQ---GDNKFEVVTTQ---------R-----------TFVFRVEKEEERNDWISILLNA 97 (115)
T ss_dssp SSCCSSCCCEEETTTEEEEEEE---TTTEEEEEESS---------C-----------CEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCcccCCEEECCcceEEEeC---CCCEEEEEeCC---------c-----------EEEEECCCHHHHHHHHHHHHHH
Confidence 4556789999999997543332 24667765222 0 4555566667778888876433
No 82
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=60.62 E-value=5.6 Score=27.85 Aligned_cols=57 Identities=25% Similarity=0.436 Sum_probs=38.8
Q ss_pred CCCCCeeeeecCCceeEecccc------C---ccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCcee
Q psy17821 7 RQVEPRGIIPLENIQVREVHDR------H---KPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWI 77 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v~~~~~~------~---g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~i 77 (194)
.+..|+|.|+|.++.|..+... . ++.+|+|.... ...|..++-+..+...|+
T Consensus 56 ~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~-------------------~r~~~l~a~s~~e~~~Wi 116 (129)
T 1x1g_A 56 EENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKD-------------------DTHYYIQASSKAERAEWI 116 (129)
T ss_dssp CCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTT-------------------CCCEEECCSSHHHHHHHH
T ss_pred cCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCC-------------------CCEEEEEcCCHHHHHHHH
Confidence 6789999999999888766543 1 45777776432 013666667777778888
Q ss_pred eecCc
Q psy17821 78 KYSEG 82 (194)
Q Consensus 78 qg~g~ 82 (194)
+++..
T Consensus 117 ~al~~ 121 (129)
T 1x1g_A 117 EAIKK 121 (129)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77543
No 83
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=58.13 E-value=3.1 Score=33.09 Aligned_cols=59 Identities=10% Similarity=0.280 Sum_probs=41.0
Q ss_pred CCCCCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCccc
Q psy17821 5 DDRQVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGKV 84 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~si 84 (194)
++.+..|+|.|+|.++.+..... .++.+|+|.... . .|...+-+..+...|++++...+
T Consensus 96 ~~~~~~~~g~I~L~~~~~v~~~~-~k~~~F~I~t~~---------r-----------~~~l~A~s~~e~~~Wv~aL~~~i 154 (228)
T 3tfm_A 96 NDSEEKLKGTVEVRSAKEIIDNT-NKENGIDIIMAD---------R-----------TFHLIAESPEDASQWFSVLSQVH 154 (228)
T ss_dssp STTCCSEEEEEEGGGCSEEEEET-TTTSEEEEECSS---------C-----------EEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCcceeEEEEcCCCEEeccCC-CCCcEEEEEcCC---------c-----------EEEEEcCCHHHHHHHHHHHHHHH
Confidence 44567999999999988744332 456788886432 1 56677777788888988874433
No 84
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=56.81 E-value=6.9 Score=27.53 Aligned_cols=68 Identities=26% Similarity=0.394 Sum_probs=41.7
Q ss_pred CCCCCeeeeecCCcee---Eeccc--cCccEEEEEcCC---c----cchhhhcccCCCCeeecCcceeeecCccCccccC
Q psy17821 7 RQVEPRGIIPLENIQV---REVHD--RHKPHCFELFTS---G----FEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKD 74 (194)
Q Consensus 7 ~~~~p~G~i~l~~~~v---~~~~~--~~g~i~feL~~~---~----~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~ 74 (194)
....|+|.|+|.++.+ ..... ..++.+|+|... . ..++..|+.+. ....|..++-+..+..
T Consensus 45 ~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~-------~~r~~~l~A~s~~e~~ 117 (134)
T 2y7b_A 45 KRKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTL-------CVTKNWLSADTKEERD 117 (134)
T ss_dssp TTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTE-------EEEEEEEECSSHHHHH
T ss_pred cccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCC-------ceEEEEEECCCHHHHH
Confidence 3479999999999874 33322 246788998752 1 13444454320 0124667777777777
Q ss_pred ceeeecC
Q psy17821 75 EWIKYSE 81 (194)
Q Consensus 75 ~~iqg~g 81 (194)
.|++++.
T Consensus 118 ~Wi~al~ 124 (134)
T 2y7b_A 118 LWMQKLN 124 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7877654
No 85
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.84 E-value=3.8 Score=28.66 Aligned_cols=52 Identities=21% Similarity=0.524 Sum_probs=35.9
Q ss_pred CCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 9 VEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 9 ~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
..|+|.|+|.++.|.... ..+.+|+|.... +. .|...+-+..+...||+++.
T Consensus 49 ~~~~g~I~L~~~~v~~~~--~~~~~F~i~~~~--------~r-----------~~~l~a~s~~e~~~Wi~al~ 100 (120)
T 2d9x_A 49 QKPRGTLQLAGAVISPSD--EDSHTFTVNAAS--------GE-----------QYKLRATDAKERQHWVSRLQ 100 (120)
T ss_dssp SCCSEEEECTTCCEECCS--SSSSCEEECCSS--------SC-----------CEEECCSSHHHHHHHHHHHH
T ss_pred CCccceEEcceEEEEecC--CCCCEEEEEcCC--------CC-----------EEEEECCCHHHHHHHHHHHH
Confidence 489999999998765432 345677776321 01 56667777788888988864
No 86
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=51.97 E-value=3.9 Score=31.07 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=39.4
Q ss_pred eeeeecCCceeEeccc--cCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCcc
Q psy17821 12 RGIIPLENIQVREVHD--RHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGK 83 (194)
Q Consensus 12 ~G~i~l~~~~v~~~~~--~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~s 83 (194)
+|.|+|+++.|..... ..++++|+|-+... .+..|...+-.+.....|++.|+..
T Consensus 90 kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~-----------------~~~~~~laAds~Eem~dW~kaIrea 146 (150)
T 2fjl_A 90 RGVLDVPACQIAIRPEGKNNRLFVFSISMPSV-----------------AQWSLDVAADSQEELQDWVKKIREV 146 (150)
T ss_dssp CEEECSTTCEEEEETTCSSSCSCEEEEECTTT-----------------SSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred cceEecCccEEEeccCCCCCCceEEEEeCCCC-----------------CCceEEEEeCCHHHHHHHHHHHHHH
Confidence 8999999999988653 35779999865431 0125777777777778888776543
No 87
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=51.14 E-value=2.6 Score=34.64 Aligned_cols=53 Identities=25% Similarity=0.481 Sum_probs=37.4
Q ss_pred CCCeeeeecCCce-eEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 9 VEPRGIIPLENIQ-VREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 9 ~~p~G~i~l~~~~-v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
.+|+|.|+|.++. |....+...+.+|+|.... . .|...+-+..+.+.|++.+.
T Consensus 55 ~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~---------r-----------ty~l~A~se~e~~~Wi~aL~ 108 (264)
T 1qqg_A 55 SAPKRSIPLESCFNINKRADSKNKHLVALYTRD---------E-----------HFAIAADSEAEQDSWYQALL 108 (264)
T ss_dssp SCCSEEEEGGGEEEEEEECCSSCSSEEEEEESS---------C-----------EEEEECSSHHHHHHHHHHHH
T ss_pred cCcceEEEeeceEEEEeccCCCCCcEEEEEECC---------E-----------EEEEEeCCHHHHHHHHHHHH
Confidence 5899999999975 4344445567888887432 1 56666777777888888863
No 88
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=50.39 E-value=4.8 Score=30.24 Aligned_cols=56 Identities=16% Similarity=0.361 Sum_probs=35.0
Q ss_pred CCCCCCeeeeecCCceeEec-ccc------CccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceee
Q psy17821 6 DRQVEPRGIIPLENIQVREV-HDR------HKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIK 78 (194)
Q Consensus 6 ~~~~~p~G~i~l~~~~v~~~-~~~------~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iq 78 (194)
.....|+|.|+|..+..... ... ....+|++.... . .|...+-+..+.+.||+
T Consensus 55 ~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~-------------------r-t~~l~A~s~~e~~~Wi~ 114 (164)
T 2lul_A 55 AEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA-------------------N-TLYIFAPSPQSRDLWVK 114 (164)
T ss_dssp SSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS-------------------C-EEEEECSSHHHHHHHHH
T ss_pred CcccccccEEEEeeeEEEEeccccccCcccccceeEEEecCC-------------------c-EEEEECCCHHHHHHHHH
Confidence 34567899999998765432 221 123455554322 1 45566778888899999
Q ss_pred ecC
Q psy17821 79 YSE 81 (194)
Q Consensus 79 g~g 81 (194)
++.
T Consensus 115 aL~ 117 (164)
T 2lul_A 115 KLK 117 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 89
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.75 E-value=20 Score=26.71 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=21.1
Q ss_pred CCCeeeeecCCceeEecc-ccCccEEEEEc
Q psy17821 9 VEPRGIIPLENIQVREVH-DRHKPHCFELF 37 (194)
Q Consensus 9 ~~p~G~i~l~~~~v~~~~-~~~g~i~feL~ 37 (194)
.+|.|.|+|+++.|.... ...+++.|.|.
T Consensus 51 ~ePig~I~L~gceV~pd~~~~~~kf~ikl~ 80 (137)
T 2ys3_A 51 GDPIQQLNLKGCEVVPDVNVSGQKFCIKLL 80 (137)
T ss_dssp SCCSCCBCTTTCEEEECCBGGGTBEEEEEE
T ss_pred CCCceEEECCCCEEeccccccCCceEEEEE
Confidence 389999999999986642 23456666665
No 90
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=41.84 E-value=3.8 Score=28.07 Aligned_cols=18 Identities=6% Similarity=0.023 Sum_probs=14.1
Q ss_pred CCCCCCCeeeeecCCcee
Q psy17821 5 DDRQVEPRGIIPLENIQV 22 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~~~v 22 (194)
++.+.+|+|.|+|....+
T Consensus 39 ~~~~~~~~g~i~l~~~~i 56 (112)
T 3aj4_A 39 DQTRQNIEDKVHMPMDCI 56 (112)
T ss_dssp STTCCSEEEEEEHHHHEE
T ss_pred CCCCCCCCccccccccce
Confidence 456788999999987653
No 91
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=38.73 E-value=8.6 Score=33.20 Aligned_cols=59 Identities=15% Similarity=0.273 Sum_probs=38.6
Q ss_pred CCCCCCCCeeeeecCCceeE----ec--cccCc---cEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccC
Q psy17821 4 GDDRQVEPRGIIPLENIQVR----EV--HDRHK---PHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKD 74 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~----~~--~~~~g---~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~ 74 (194)
+++.+..|+|.|+|...... .. ....+ +.+|+|.... . .|..++-+..+..
T Consensus 302 k~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~---------r-----------ty~l~A~s~~e~~ 361 (386)
T 3lju_X 302 KDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPD---------R-----------KFLFACETESDQR 361 (386)
T ss_dssp SSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSS---------C-----------EEEEEESSHHHHH
T ss_pred ecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCC---------e-----------EEEEEcCCHHHHH
Confidence 35667899999999775432 21 11122 4888887432 1 6777777778888
Q ss_pred ceeeecCc
Q psy17821 75 EWIKYSEG 82 (194)
Q Consensus 75 ~~iqg~g~ 82 (194)
.||+++..
T Consensus 362 ~Wi~aL~~ 369 (386)
T 3lju_X 362 EWVAAFQK 369 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887643
No 92
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=36.46 E-value=29 Score=23.28 Aligned_cols=55 Identities=15% Similarity=0.246 Sum_probs=36.5
Q ss_pred CCCCeeeeecCCceeEeccccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 8 QVEPRGIIPLENIQVREVHDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 8 ~~~p~G~i~l~~~~v~~~~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
+..|.+.|+|.+..|....+..++.+|+|.... ...|...+-+..+...|++++.
T Consensus 43 ~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~-------------------~r~~~l~A~s~~e~~~Wi~al~ 97 (107)
T 2cof_A 43 SKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKG-------------------EELAKLEAKSSEEMGHWLGLLL 97 (107)
T ss_dssp CSEEEEEECTTTCEEECCCBTTBSCEEEEEETT-------------------EEEEEEECSSHHHHHHHHHHHH
T ss_pred cCCCeeEEeccceEEEECCCCCCCeEEEEEeCC-------------------CeEEEEEcCCHHHHHHHHHHHH
Confidence 445666777777767666666677889887431 0146666777777788887653
No 93
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=28.94 E-value=13 Score=26.43 Aligned_cols=58 Identities=10% Similarity=0.197 Sum_probs=34.6
Q ss_pred CCCCCCCeeeeecCC-c-eeEe------c---cccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCcccc
Q psy17821 5 DDRQVEPRGIIPLEN-I-QVRE------V---HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEK 73 (194)
Q Consensus 5 ~~~~~~p~G~i~l~~-~-~v~~------~---~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~ 73 (194)
++.+.+|.|.|++.. + .+.. + .....+.+|+|.... + + .|..++-+..+.
T Consensus 42 ~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~---------~--------r--~~~l~A~s~~e~ 102 (130)
T 2d9v_A 42 DETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLRE---------G--------S--RLHLCAETRDDA 102 (130)
T ss_dssp SSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETT---------S--------C--EEEEECSSHHHH
T ss_pred CCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCC---------C--------C--EEEEEcCCHHHH
Confidence 455668999998874 2 2221 1 112234666665311 0 1 566777788888
Q ss_pred CceeeecC
Q psy17821 74 DEWIKYSE 81 (194)
Q Consensus 74 ~~~iqg~g 81 (194)
..||+++.
T Consensus 103 ~~Wi~al~ 110 (130)
T 2d9v_A 103 IAWKTALM 110 (130)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 94
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=28.89 E-value=5.2 Score=32.27 Aligned_cols=65 Identities=11% Similarity=0.176 Sum_probs=38.7
Q ss_pred CCCCCCCCeeeeecCCceeEecc---------ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccC
Q psy17821 4 GDDRQVEPRGIIPLENIQVREVH---------DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKD 74 (194)
Q Consensus 4 ~~~~~~~p~G~i~l~~~~v~~~~---------~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~ 74 (194)
+++.+.+|+|.|+|.++.+..+. .+.++++|.|.+...++ +.+..|..++-+.....
T Consensus 200 k~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~--------------~~~~~~~l~A~s~~e~~ 265 (291)
T 3tca_A 200 PKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQK--------------ESQYIKYLCCDDARTLS 265 (291)
T ss_dssp CTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCS--------------CCTTSEEEECSSHHHHH
T ss_pred ecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCC--------------CCceEEEEECCCHHHHH
Confidence 45667789998888765443221 12356888887543110 01114556677777788
Q ss_pred ceeeecCc
Q psy17821 75 EWIKYSEG 82 (194)
Q Consensus 75 ~~iqg~g~ 82 (194)
.|++++..
T Consensus 266 ~Wi~air~ 273 (291)
T 3tca_A 266 QWVMGIRI 273 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887643
No 95
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=28.67 E-value=12 Score=27.65 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCCeeeeecCCc--eeEec-cccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecCccc
Q psy17821 9 VEPRGIIPLENI--QVREV-HDRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSEGKV 84 (194)
Q Consensus 9 ~~p~G~i~l~~~--~v~~~-~~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g~si 84 (194)
..|.|.|+|... .+.+. ....++.+|+|.... . .|...+-...+...||+++...+
T Consensus 52 ~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~---------r-----------~~~l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 52 TPSEEEQPISVNACLIDISYSETKRKNVFRLTTSD---------C-----------ECLFQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp -------CEECSSCEEEECSSSCSCSSEEEEECSS---------C-----------EEEEECSSHHHHHHHHHHHHHHC
T ss_pred cccCCceEecccceEEEeccccCCCCCEEEEEeCC---------c-----------eEEEEcCCHHHHHHHHHHHHHHH
Confidence 678999999873 33332 234566888887432 1 57777778888899999874433
No 96
>3zy0_A Tumor protein P63; transcription, transcription factor, tetramerization domain, cycle control; HET: MSE; 1.90A {Homo sapiens}
Probab=24.06 E-value=13 Score=20.82 Aligned_cols=13 Identities=38% Similarity=0.501 Sum_probs=8.6
Q ss_pred CccccccccccCC
Q psy17821 182 GERHDFNEKVRGR 194 (194)
Q Consensus 182 ~e~~~~~~~~~~~ 194 (194)
||.|-|-|+|.||
T Consensus 1 gd~e~f~l~VrGR 13 (32)
T 3zy0_A 1 GSDELLYLPVRGR 13 (32)
T ss_dssp ---CCEEEEESSH
T ss_pred CCCcEEEEEEech
Confidence 5677889999886
No 97
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=23.79 E-value=5.3 Score=28.31 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCCeeeeecCCceeEecc------ccCccEEEEEcCCccchhhhcccCCCCeeecCcceeeecCccCccccCceeeecC
Q psy17821 8 QVEPRGIIPLENIQVREVH------DRHKPHCFELFTSGFEFIKACKTDSEGKVVEGKHTVYRMSAATAEEKDEWIKYSE 81 (194)
Q Consensus 8 ~~~p~G~i~l~~~~v~~~~------~~~g~i~feL~~~~~NFi~Lc~~~~~g~~v~g~~~~Y~~s~f~rv~~~~~iqg~g 81 (194)
...|.|.|||++..+.... ...++.+|++.+.. ...|..++-+..+.+.||+++.
T Consensus 60 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~-------------------~r~~~l~A~s~~e~~~Wi~ai~ 120 (128)
T 2rlo_A 60 VKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSST-------------------GQTWHFEAASFEERDAWVQAIE 120 (128)
T ss_dssp EECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTT-------------------SCEEEEEESSHHHHHHHHHHHH
T ss_pred EecCCCccccccccccccccccccccccCCceEEEEcCC-------------------CCEEEEEcCCHHHHHHHHHHHH
Confidence 3457888888887654221 11345666665321 0157777888888888888764
Q ss_pred c
Q psy17821 82 G 82 (194)
Q Consensus 82 ~ 82 (194)
.
T Consensus 121 ~ 121 (128)
T 2rlo_A 121 S 121 (128)
T ss_dssp H
T ss_pred H
Confidence 3
No 98
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=23.28 E-value=31 Score=25.26 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=24.7
Q ss_pred CCeeeeecCCceeEecccc-CccEEEEEcCCc
Q psy17821 10 EPRGIIPLENIQVREVHDR-HKPHCFELFTSG 40 (194)
Q Consensus 10 ~p~G~i~l~~~~v~~~~~~-~g~i~feL~~~~ 40 (194)
.-+|.+||.++.|...++. ..+.+||+++..
T Consensus 69 ~~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~ 100 (132)
T 1v61_A 69 MYQGKIPIAGMVVNRLDEIEGSDCMFEITGST 100 (132)
T ss_dssp EEEEEECTTTCBCSTTCSSSSSCCCEEEECSS
T ss_pred EEEEEEecceeEEEeccccccCccEEEEecCC
Confidence 4479999999999877664 467899999765
Done!