BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17822
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O08967|CYH3_MOUSE Cytohesin-3 OS=Mus musculus GN=Cyth3 PE=1 SV=1
Length = 399
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
MDPKKGI++LI+N+LL+ + VAQFLYKGEGLNKT IGDYLGER DFN K
Sbjct: 79 MDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIK 129
>sp|P97696|CYH3_RAT Cytohesin-3 OS=Rattus norvegicus GN=Cyth3 PE=2 SV=1
Length = 400
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
MDPKKGI++LI+N+LL+ + VAQFLYKGEGLNKT IGDYLGER DFN K
Sbjct: 79 MDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIK 129
>sp|Q15438|CYH1_HUMAN Cytohesin-1 OS=Homo sapiens GN=CYTH1 PE=1 SV=1
Length = 398
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++LI+N+LL+ T +AQFLYKGEGLNKTAIGDYLGER +FN
Sbjct: 75 MDPKKGIQFLIENDLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFN 123
>sp|Q76MZ1|CYH1_CHLAE Cytohesin-1 OS=Chlorocebus aethiops GN=CYTH1 PE=2 SV=1
Length = 398
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++LI+N+LL+ T +AQFLYKGEGLNKTAIGDYLGER +FN
Sbjct: 75 MDPKKGIQFLIENDLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFN 123
>sp|O43739|CYH3_HUMAN Cytohesin-3 OS=Homo sapiens GN=CYTH3 PE=2 SV=2
Length = 400
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
MDPKKGI++LI+N+LL+ + VAQFLYKGEGLNKT IGDYLGER +FN K
Sbjct: 79 MDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIK 129
>sp|P97694|CYH1_RAT Cytohesin-1 OS=Rattus norvegicus GN=Cyth1 PE=1 SV=1
Length = 398
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++LI+N LL+ T +AQFLYKGEGLNKTAIGDYLGER +F+
Sbjct: 75 MDPKKGIQFLIENGLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFS 123
>sp|Q9QX11|CYH1_MOUSE Cytohesin-1 OS=Mus musculus GN=Cyth1 PE=2 SV=2
Length = 398
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++LI+N LL+ T +AQFLYKGEGLNKTAIGDYLGER +F+
Sbjct: 75 MDPKKGIQFLIENGLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFS 123
>sp|Q99418|CYH2_HUMAN Cytohesin-2 OS=Homo sapiens GN=CYTH2 PE=1 SV=2
Length = 400
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++L++N LL+ T +A+FLYKGEGLNKTAIGDYLGER + N
Sbjct: 74 MDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELN 122
>sp|Q76MY7|CYH2_CHLAE Cytohesin-2 OS=Chlorocebus aethiops GN=CYTH2 PE=2 SV=1
Length = 399
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++L++N LL+ T +A+FLYKGEGLNKTAIGDYLGER + N
Sbjct: 74 MDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELN 122
>sp|Q2KI41|CYH2_BOVIN Cytohesin-2 OS=Bos taurus GN=CYTH2 PE=2 SV=1
Length = 410
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++L++N LL+ T +A+FLYKGEGLNKTAIGDYLGER + N
Sbjct: 74 MDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELN 122
>sp|P63035|CYH2_RAT Cytohesin-2 OS=Rattus norvegicus GN=Cyth2 PE=1 SV=1
Length = 400
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++L+++ LL+ T +A+FLYKGEGLNKTAIGDYLGER + N
Sbjct: 74 MDPKKGIQFLVEHELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELN 122
>sp|P63034|CYH2_MOUSE Cytohesin-2 OS=Mus musculus GN=Cyth2 PE=1 SV=2
Length = 400
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDPKKGI++L+++ LL+ T +A+FLYKGEGLNKTAIGDYLGER + N
Sbjct: 74 MDPKKGIQFLVEHELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELN 122
>sp|Q9UIA0|CYH4_HUMAN Cytohesin-4 OS=Homo sapiens GN=CYTH4 PE=2 SV=1
Length = 394
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDP KGI++ I++ LL P +A+FLYKGEGLNKTAIG YLGER N
Sbjct: 74 MDPAKGIQYFIEHKLLTPDVQDIARFLYKGEGLNKTAIGTYLGERDPIN 122
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 51 KNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 88
++ LL P +A+FLYKGEGLNKTAIG YLGER N
Sbjct: 85 EHKLLTPDVQDIARFLYKGEGLNKTAIGTYLGERDPIN 122
>sp|Q80YW0|CYH4_MOUSE Cytohesin-4 OS=Mus musculus GN=Cyth4 PE=2 SV=1
Length = 393
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
MDP KGI++LI++ LL +AQFLYKG+GLNKTAIG YLGE+ N
Sbjct: 74 MDPNKGIQYLIEHKLLTSDVQDIAQFLYKGDGLNKTAIGTYLGEKDPIN 122
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 51 KNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 88
++ LL +AQFLYKG+GLNKTAIG YLGE+ N
Sbjct: 85 EHKLLTSDVQDIAQFLYKGDGLNKTAIGTYLGEKDPIN 122
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3
OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1
Length = 1750
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PKKGIE+LI+ N + + +A FL GLNKT IGDYLGER D + K
Sbjct: 623 PKKGIEFLIKANKVGDSPEEIAAFLKDASGLNKTLIGDYLGEREDLSLK 671
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1
Length = 1793
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
P KGIE+LI + + +A FL GLNKT IGDYLGER D K
Sbjct: 632 PTKGIEFLINAGKVGESPEEIAGFLKDASGLNKTLIGDYLGEREDLALK 680
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 62 VAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
+A FL GLNKT IGDYLGER D K
Sbjct: 652 IAGFLKDASGLNKTLIGDYLGEREDLALK 680
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4
OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1
Length = 1706
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHD------------FN- 49
P KG+E+LI + + VA FL K GLN T IGDYLGER + FN
Sbjct: 577 PSKGVEFLISTKKIGSSPEEVASFLMKTAGLNGTVIGDYLGERDELPLKVMHAYVDSFNF 636
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH 85
EK + +E + F GE I + E +
Sbjct: 637 EKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFAEHY 672
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 18/26 (69%)
Query: 62 VAQFLYKGEGLNKTAIGDYLGERHDF 87
VA FL K GLN T IGDYLGER +
Sbjct: 597 VASFLMKTAGLNGTVIGDYLGERDEL 622
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1
Length = 1687
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
P KGIE+LI + + + V FL GLN T IGDYLGER DF K
Sbjct: 554 PSKGIEFLISSKKVGNSPDEVVSFLRNTTGLNATMIGDYLGEREDFPMK 602
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 18/29 (62%)
Query: 62 VAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
V FL GLN T IGDYLGER DF K
Sbjct: 574 VVSFLRNTTGLNATMIGDYLGEREDFPMK 602
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5
OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2
Length = 1739
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 5 KGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDF 48
KG+E+LI N L+E VAQFL L+K IGDYLG+ +F
Sbjct: 596 KGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEF 639
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 52 NNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDF 87
N L+E VAQFL L+K IGDYLG+ +F
Sbjct: 604 NKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEF 639
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus
musculus GN=Arfgef1 PE=2 SV=1
Length = 1846
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 710 PKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 758
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
++ +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 718 QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 758
>sp|O46382|BIG1_BOVIN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos
taurus GN=ARFGEF1 PE=1 SV=1
Length = 1849
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 713 PKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 761
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
++ +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 721 QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 761
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo
sapiens GN=ARFGEF1 PE=1 SV=2
Length = 1849
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 713 PKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 761
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
++ +L T +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 721 QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 761
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo
sapiens GN=ARFGEF2 PE=1 SV=3
Length = 1785
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L + +AQFL++ E L+ T +GD+LG+ FN++
Sbjct: 658 PKRGIQFLQEQGMLGTSVEDIAQFLHQEERLDSTQVGDFLGDSARFNKE 706
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 48 FNEKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
F ++ +L + +AQFL++ E L+ T +GD+LG+ FN++
Sbjct: 664 FLQEQGMLGTSVEDIAQFLHQEERLDSTQVGDFLGDSARFNKE 706
>sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2 OS=Mus musculus
GN=Iqsec2 PE=1 SV=3
Length = 1478
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH 46
P+KGI++LI+ L T +GVA F+ + +GL++ IG++LG R
Sbjct: 758 PEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQ 801
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 54 LLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH 85
L T +GVA F+ + +GL++ IG++LG R
Sbjct: 770 FLSDTPVGVAHFILERKGLSRQMIGEFLGNRQ 801
>sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protein 2 OS=Homo sapiens
GN=IQSEC2 PE=1 SV=1
Length = 1478
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH 46
P+KGI++LI+ L T +GVA F+ + +GL++ IG++LG R
Sbjct: 758 PEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQ 801
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 54 LLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH 85
L T +GVA F+ + +GL++ IG++LG R
Sbjct: 770 FLSDTPVGVAHFILERKGLSRQMIGEFLGNRQ 801
>sp|Q8R0S2|IQEC1_MOUSE IQ motif and SEC7 domain-containing protein 1 OS=Mus musculus
GN=Iqsec1 PE=1 SV=2
Length = 961
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH-DFN 49
P+KGI++LI+ + T +GVA FL + +GL++ IG++LG R FN
Sbjct: 537 PEKGIQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFN 584
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 58 TEMGVAQFLYKGEGLNKTAIGDYLGERH-DFN 88
T +GVA FL + +GL++ IG++LG R FN
Sbjct: 553 TPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFN 584
>sp|D4A631|BIG1_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1
Length = 1846
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L T +AQFL++ E L+ T G++LG+ FN++
Sbjct: 710 PKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQAGEFLGDNDKFNKE 758
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
++ +L T +AQFL++ E L+ T G++LG+ FN++
Sbjct: 718 QEQGMLGTTPEDIAQFLHQEERLDSTQAGEFLGDNDKFNKE 758
>sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens
GN=IQSEC1 PE=1 SV=1
Length = 963
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERH-DFN 49
P+KG+++LI+ + T +GVA FL + +GL++ IG++LG R FN
Sbjct: 539 PEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFN 586
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 58 TEMGVAQFLYKGEGLNKTAIGDYLGERH-DFN 88
T +GVA FL + +GL++ IG++LG R FN
Sbjct: 555 TPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFN 586
>sp|Q3TES0|IQEC3_MOUSE IQ motif and SEC7 domain-containing protein 3 OS=Mus musculus
GN=Iqsec3 PE=1 SV=1
Length = 1195
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 49
++P KGI++LI + T +GVA FL + +GL++ IG++LG + FN
Sbjct: 668 INPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 717
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 58 TEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 88
T +GVA FL + +GL++ IG++LG + FN
Sbjct: 686 TPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 717
>sp|Q9UPP2|IQEC3_HUMAN IQ motif and SEC7 domain-containing protein 3 OS=Homo sapiens
GN=IQSEC3 PE=2 SV=3
Length = 1182
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 49
++P KGI++LI + T +GVA FL + +GL++ IG++LG + FN
Sbjct: 664 INPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 713
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 58 TEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 88
T +GVA FL + +GL++ IG++LG + FN
Sbjct: 682 TPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 713
>sp|Q76M68|IQEC3_RAT IQ motif and SEC7 domain-containing protein 3 OS=Rattus norvegicus
GN=Iqsec3 PE=1 SV=1
Length = 1194
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 1 MDPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 49
++P KGI++LI + T +GVA FL + +GL++ IG++LG + FN
Sbjct: 666 INPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 715
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 58 TEMGVAQFLYKGEGLNKTAIGDYLG-ERHDFN 88
T +GVA FL + +GL++ IG++LG + FN
Sbjct: 684 TPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFN 715
>sp|Q54KA7|SECG_DICDI Ankyrin repeat, PH and SEC7 domain containing protein secG
OS=Dictyostelium discoideum GN=secG PE=2 SV=1
Length = 986
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 3 PKKGIEWLIQNNLL-EPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
PKKGIE+++ N ++ E VA FL L+K +IG+Y+GE DFN
Sbjct: 602 PKKGIEFIVANGVISEKNPKEVAHFLLTHSELSKQSIGEYIGEGDDFN 649
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1
Length = 1791
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 665 PKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKE 713
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 48 FNEKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
F ++ +L +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 671 FLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKE 713
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus
musculus GN=Arfgef2 PE=1 SV=1
Length = 1792
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 3 PKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 51
PK+GI++L + +L +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 665 PKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKE 713
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 48 FNEKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEK 90
F ++ +L +AQFL++ E L+ T +G++LG+ FN++
Sbjct: 671 FLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKE 713
>sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec71 PE=1 SV=1
Length = 1811
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 3 PKKGIEWLIQNNLL-EPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
PK+GI+ L+ ++ + T +A+FL EGL+K +G+YLGE +D N
Sbjct: 714 PKEGIKILLSSHFIASKTPTDIAKFLISTEGLDKAVLGEYLGEGNDEN 761
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 57 PTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 88
PT+ +A+FL EGL+K +G+YLGE +D N
Sbjct: 732 PTD--IAKFLISTEGLDKAVLGEYLGEGNDEN 761
>sp|P34512|GRP1_CAEEL GTP exchange factor for ARFs 1 OS=Caenorhabditis elegans GN=grp-1
PE=2 SV=2
Length = 393
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 2 DPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDF 48
DP K ++WL N++ +A ++ GEGL+K+AIG+ LG+ F
Sbjct: 74 DPWKALDWLASRNVVAKDPQALALWMKAGEGLSKSAIGEILGDNRPF 120
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 47 DFNEKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDF 87
D+ N++ +A ++ GEGL+K+AIG+ LG+ F
Sbjct: 80 DWLASRNVVAKDPQALALWMKAGEGLSKSAIGEILGDNRPF 120
>sp|Q9P7V5|SEC7B_SCHPO Protein transport protein sec72 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec72 PE=1 SV=1
Length = 1822
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 3 PKKGIEWLIQNNLLEPTE-MGVAQFLYKGEGLNKTAIGDYLGE 44
P +G++ L +N ++ + +A+FL++ +G++KT +GDYLGE
Sbjct: 723 PTRGLKMLSENEYVDINDPKAIAEFLFRADGIDKTTLGDYLGE 765
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 49 NEKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGE 83
NE ++ +P +A+FL++ +G++KT +GDYLGE
Sbjct: 733 NEYVDINDPK--AIAEFLFRADGIDKTTLGDYLGE 765
>sp|P11075|SEC7_YEAST Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2
Length = 2009
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 3 PKKGIEWLIQNNLL-EPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 49
PKK I LI+ L + + + +A++L + EGL+ A+GDYLGE D N
Sbjct: 842 PKKAIPVLIKKGFLKDDSPISIAKWLLETEGLDMAAVGDYLGEGDDKN 889
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 50 EKNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFN 88
+K L + + + +A++L + EGL+ A+GDYLGE D N
Sbjct: 851 KKGFLKDDSPISIAKWLLETEGLDMAAVGDYLGEGDDKN 889
>sp|F4K2K3|GNL2_ARATH ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana
GN=GNL2 PE=2 SV=1
Length = 1375
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 2 DPKKGIEWLIQNNLL-EPTE-MGVAQFLYKGEGLNKTAIGDYLGE 44
D KKG+E+L N L+ +P + M +A F GL+KT IGDYLG+
Sbjct: 507 DEKKGLEYLKYNYLVSDPLDPMALASFFRFTPGLDKTMIGDYLGD 551
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 55 LEPTEMGVAQFLYKGEGLNKTAIGDYLGE 83
L+P M +A F GL+KT IGDYLG+
Sbjct: 525 LDP--MALASFFRFTPGLDKTMIGDYLGD 551
>sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana
GN=GN PE=1 SV=1
Length = 1451
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 2 DPKKGIEWLIQNNLLEPTEM---GVAQFLYKGEGLNKTAIGDYLGERHDF 48
DPKKG+E+L +LL P ++ VA F GL+K +GD+LG +F
Sbjct: 575 DPKKGLEFLQGTHLL-PDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEF 623
>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Cricetulus griseus GN=GBF1 PE=2 SV=1
Length = 1856
Score = 33.1 bits (74), Expect = 0.59, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 3 PKKGIEWLIQNNLL----EPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKNNLLEPT 58
PKKGI++L + LL + TE VAQ+L + L+K IG+++ +R + +LLE
Sbjct: 712 PKKGIQFLQEKGLLTIPMDNTE--VAQWLRENPRLDKKMIGEFVSDRKNI----DLLESF 765
Query: 59 EMGVAQFLYKGEGLNK 74
V+ F ++G L++
Sbjct: 766 ---VSTFSFQGLRLDE 778
>sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2
Length = 1859
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 3 PKKGIEWLIQNNLL----EPTEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKNNLLEPT 58
PKKGI++L + LL + TE VAQ+L + L+K IG+++ +R + +LLE
Sbjct: 714 PKKGIQFLQEKGLLTIPMDNTE--VAQWLRENPRLDKKMIGEFVSDRKNI----DLLESF 767
Query: 59 EMGVAQFLYKGEGLNK 74
V+ F ++G L++
Sbjct: 768 ---VSTFSFQGLRLDE 780
>sp|Q9FLY5|GNL1_ARATH ARF guanine-nucleotide exchange factor GNL1 OS=Arabidopsis thaliana
GN=GNL1 PE=3 SV=1
Length = 1443
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 2 DPKKGIEWLIQNNLLEPTEM---GVAQFLYKGEGLNKTAIGDYLGERHDF 48
DP KG+++L +LL P ++ VA F GL+K +GD+LG F
Sbjct: 575 DPNKGLQYLQGVHLL-PEKLDPKSVACFFRYTCGLDKNVMGDFLGNHDQF 623
>sp|Q54QV7|GSTA5_DICDI Putative glutathione S-transferase alpha-5 OS=Dictyostelium
discoideum GN=gsta5 PE=3 SV=1
Length = 198
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 19 TEMGVAQFLYKGEGLNKTAIGDYLGERHDFNEKNNLLEPTEMGVAQFLYKG-----EG-- 71
T+ + F +G + +YLGE ++FNE + + Q L+K EG
Sbjct: 2 TKPTLTYFPVRGRVQFPRCLLEYLGEEYNFNEVKTISDDLR---KQLLFKQLPLYQEGDF 58
Query: 72 --LNKTAIGDYLGERHDFNEKN 91
+ AI DY+ E+HDF K
Sbjct: 59 KIVQTPAIIDYISEKHDFRGKT 80
>sp|Q9QZN3|FBX8_MOUSE F-box only protein 8 OS=Mus musculus GN=Fbxo8 PE=2 SV=2
Length = 319
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 2 DPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHD 47
+P++G+ + + +L+ + +A+F++ LN + YL ER D
Sbjct: 149 NPEEGVSYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDERRD 194
>sp|Q5E9G6|FBX8_BOVIN F-box only protein 8 OS=Bos taurus GN=FBXO8 PE=2 SV=1
Length = 319
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 2 DPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHD 47
+P +G+ + + +L+ + +A+F++ LN + YL ER D
Sbjct: 149 NPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDERRD 194
>sp|Q9NRD0|FBX8_HUMAN F-box only protein 8 OS=Homo sapiens GN=FBXO8 PE=2 SV=1
Length = 319
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 2 DPKKGIEWLIQNNLLEPTEMGVAQFLYKGEGLNKTAIGDYLGERHD 47
+P +G+ + + +L+ + +A+F++ LN + YL ER D
Sbjct: 149 NPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDERRD 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.138 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,372,314
Number of Sequences: 539616
Number of extensions: 1617206
Number of successful extensions: 2389
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2278
Number of HSP's gapped (non-prelim): 111
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)