BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17823
(92 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63035|CYH2_RAT Cytohesin-2 OS=Rattus norvegicus GN=Cyth2 PE=1 SV=1
Length = 400
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/59 (83%), Positives = 52/59 (88%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
SVL AFVDLH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYC NP +F +T
Sbjct: 124 SVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQST 182
>sp|P63034|CYH2_MOUSE Cytohesin-2 OS=Mus musculus GN=Cyth2 PE=1 SV=2
Length = 400
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/59 (83%), Positives = 52/59 (88%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
SVL AFVDLH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYC NP +F +T
Sbjct: 124 SVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQST 182
>sp|Q99418|CYH2_HUMAN Cytohesin-2 OS=Homo sapiens GN=CYTH2 PE=1 SV=2
Length = 400
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
+VL AFVDLH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYC NP +F +T
Sbjct: 124 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQST 182
>sp|Q2KI41|CYH2_BOVIN Cytohesin-2 OS=Bos taurus GN=CYTH2 PE=2 SV=1
Length = 410
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
+VL AFVDLH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYC NP +F +T
Sbjct: 124 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQST 182
>sp|Q76MY7|CYH2_CHLAE Cytohesin-2 OS=Chlorocebus aethiops GN=CYTH2 PE=2 SV=1
Length = 399
Score = 107 bits (268), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
+VL AFVDLH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYC NP +F +T
Sbjct: 124 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQST 182
>sp|P97694|CYH1_RAT Cytohesin-1 OS=Rattus norvegicus GN=Cyth1 PE=1 SV=1
Length = 398
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/78 (67%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 4 AISFSLRFRDDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMM 63
AI L RD+ +I VL AFV+LH+FTDL LVQALRQFLWSFRLPGEAQKIDRMM
Sbjct: 111 AIGDYLGERDEFSI-----QVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMM 165
Query: 64 ECFAQRYCQLNPNIFTNT 81
E FAQRYCQ N +F +T
Sbjct: 166 EAFAQRYCQCNTGVFQST 183
>sp|Q9QX11|CYH1_MOUSE Cytohesin-1 OS=Mus musculus GN=Cyth1 PE=2 SV=2
Length = 398
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/78 (67%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 4 AISFSLRFRDDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMM 63
AI L RD+ +I VL AFV+LH+FTDL LVQALRQFLWSFRLPGEAQKIDRMM
Sbjct: 111 AIGDYLGERDEFSI-----QVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMM 165
Query: 64 ECFAQRYCQLNPNIFTNT 81
E FAQRYCQ N +F +T
Sbjct: 166 EAFAQRYCQCNTGVFQST 183
>sp|Q15438|CYH1_HUMAN Cytohesin-1 OS=Homo sapiens GN=CYTH1 PE=1 SV=1
Length = 398
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
VL AFV+LH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYCQ N +F +T
Sbjct: 126 VLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNNGVFQST 183
>sp|Q76MZ1|CYH1_CHLAE Cytohesin-1 OS=Chlorocebus aethiops GN=CYTH1 PE=2 SV=1
Length = 398
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
VL AFV+LH+FTDL LVQALRQFLWSFRLPGEAQKIDRMME FAQRYCQ N +F +T
Sbjct: 126 VLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNNGVFQST 183
>sp|P97696|CYH3_RAT Cytohesin-3 OS=Rattus norvegicus GN=Cyth3 PE=2 SV=1
Length = 400
Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 5/70 (7%)
Query: 12 RDDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYC 71
RDD I VL+AFV+LH+F DL LVQALRQFLWSFRLPGEAQKIDRMME FA RYC
Sbjct: 123 RDDFNI-----KVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYC 177
Query: 72 QLNPNIFTNT 81
NP +F +T
Sbjct: 178 LCNPGVFQST 187
>sp|O08967|CYH3_MOUSE Cytohesin-3 OS=Mus musculus GN=Cyth3 PE=1 SV=1
Length = 399
Score = 102 bits (255), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 5/70 (7%)
Query: 12 RDDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYC 71
RDD I VL+AFV+LH+F DL LVQALRQFLWSFRLPGEAQKIDRMME FA RYC
Sbjct: 123 RDDFNI-----KVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYC 177
Query: 72 QLNPNIFTNT 81
NP +F +T
Sbjct: 178 LCNPGVFQST 187
>sp|O43739|CYH3_HUMAN Cytohesin-3 OS=Homo sapiens GN=CYTH3 PE=2 SV=2
Length = 400
Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
VL+AFV+LH+F DL LVQALRQFLWSFRLPGEAQKIDRMME FA RYC NP +F +T
Sbjct: 130 VLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQST 187
>sp|Q80YW0|CYH4_MOUSE Cytohesin-4 OS=Mus musculus GN=Cyth4 PE=2 SV=1
Length = 393
Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/58 (75%), Positives = 49/58 (84%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
VL+AFVD H+F +L LVQALRQFLWSFRLPGEAQKIDRMME FA RYC NP +F +T
Sbjct: 125 VLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAARYCLCNPGVFRST 182
>sp|Q9UIA0|CYH4_HUMAN Cytohesin-4 OS=Homo sapiens GN=CYTH4 PE=2 SV=1
Length = 394
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/58 (75%), Positives = 49/58 (84%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
VL+AFVD H+F +L LVQALRQFLWSFRLPGEAQKIDRMME FA RYC NP +F +T
Sbjct: 125 VLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFATRYCLCNPGVFQST 182
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1
Length = 1793
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNTAH 83
V+ A+VD DF + +A+R FL FRLPGEAQKIDR+ME FA+RYC+ NP +FT+
Sbjct: 681 VMHAYVDSFDFRGMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADS 740
Query: 84 THRL 87
+ L
Sbjct: 741 AYVL 744
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5
OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2
Length = 1739
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
+V+ A+VD F+++ A+R+FL FRLPGEAQKIDR+ME FA+RYC NP +F N
Sbjct: 642 AVMHAYVDSMKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKN 699
>sp|P11075|SEC7_YEAST Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2
Length = 2009
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 13 DDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQ 72
DDK IA+ + AFVD DFT + +V ALR FL SFRLPGE QKIDR M FA+R+
Sbjct: 886 DDKNIAI-----MHAFVDEFDFTGMSIVDALRSFLQSFRLPGEGQKIDRFMLKFAERFVD 940
Query: 73 LNPNIFT 79
NP +F+
Sbjct: 941 QNPGVFS 947
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1
Length = 1687
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
V+ A+VD DF ++ +A+R FL FRLPGEAQKIDR+ME FA+R+C+ NPN F++
Sbjct: 603 VMHAYVDSFDFKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSS 659
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3
OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1
Length = 1750
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
V+ A+VD +F + +A+R FL FRLPGEAQKIDR+ME FA+R+C+ NP F++
Sbjct: 672 VMHAYVDSFEFQGMEFDEAIRAFLRGFRLPGEAQKIDRIMEKFAERFCKCNPKDFSS 728
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo
sapiens GN=ARFGEF1 PE=1 SV=2
Length = 1849
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD HDF+ V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 762 VMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECN 812
>sp|O46382|BIG1_BOVIN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos
taurus GN=ARFGEF1 PE=1 SV=1
Length = 1849
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD HDF+ V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 762 VMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECN 812
>sp|D4A631|BIG1_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1
Length = 1846
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD HDF+ V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 759 VMYAYVDQHDFSGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECN 809
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus
musculus GN=Arfgef1 PE=2 SV=1
Length = 1846
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD HDF+ V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 759 VMYAYVDQHDFSGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECN 809
>sp|Q9P7V5|SEC7B_SCHPO Protein transport protein sec72 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec72 PE=1 SV=1
Length = 1822
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 13 DDKTIAVTVPSVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQ 72
D+K+I SV+ F+D F +L V ALR+ L FRLPGEAQKIDR+M F++RY +
Sbjct: 767 DEKSI-----SVMHEFIDCLSFINLKFVDALRRLLQCFRLPGEAQKIDRIMLKFSERYMK 821
Query: 73 LNPNIFTN 80
NP+ F N
Sbjct: 822 ENPSAFAN 829
>sp|Q54KA7|SECG_DICDI Ankyrin repeat, PH and SEC7 domain containing protein secG
OS=Dictyostelium discoideum GN=secG PE=2 SV=1
Length = 986
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNP--NIFTN 80
VL AFVD +F L ALR++L +FRLPGEAQKIDRMME FA ++ Q NP +F N
Sbjct: 652 VLHAFVDELNFFGLDFDVALRKYLLTFRLPGEAQKIDRMMEKFASQFYQHNPENKVFVN 710
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4
OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1
Length = 1706
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
V+ A+VD +F V+A+R FL FRLPGEAQKIDR+ME FA+ Y + NP FT+
Sbjct: 626 VMHAYVDSFNFEKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFAEHYWKCNPGSFTS 682
>sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec71 PE=1 SV=1
Length = 1811
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
+++ +FVD F D+ V ALR FL FRLPGEAQKIDR M FA++Y N +F N
Sbjct: 763 AIMHSFVDHMSFNDIPFVNALRSFLQKFRLPGEAQKIDRFMLKFAEKYIDDNLGVFKN 820
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1
Length = 1791
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD DF + V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 714 VMYAYVDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECN 764
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus
musculus GN=Arfgef2 PE=1 SV=1
Length = 1792
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD DF + V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 714 VMYAYVDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECN 764
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo
sapiens GN=ARFGEF2 PE=1 SV=3
Length = 1785
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN 74
V+ A+VD DF + V ALR FL FRLPGEAQKIDR+ME FA RY + N
Sbjct: 707 VMYAYVDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECN 757
>sp|F4K2K3|GNL2_ARATH ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana
GN=GNL2 PE=2 SV=1
Length = 1375
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQR-YCQLNPNIFTNT 81
SVLR+F +FT + L ALR FL SFRLPGE+QKI+RM+E F++R Y Q + +IF +
Sbjct: 558 SVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFSERFYDQQSSDIFASK 617
Query: 82 AHTHRL 87
H L
Sbjct: 618 DTVHIL 623
>sp|P34512|GRP1_CAEEL GTP exchange factor for ARFs 1 OS=Caenorhabditis elegans GN=grp-1
PE=2 SV=2
Length = 393
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 25 LRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNTAHT 84
L F H D+ +V ALRQ+L+SFRLPGE+QKI+R++E FA+ Y NP+ + N
Sbjct: 125 LDRFTKEHKLHDVPIVPALRQYLFSFRLPGESQKINRILEKFAEVYANQNPS-YGNADQA 183
Query: 85 H 85
H
Sbjct: 184 H 184
>sp|Q76M68|IQEC3_RAT IQ motif and SEC7 domain-containing protein 3 OS=Rattus norvegicus
GN=Iqsec3 PE=1 SV=1
Length = 1194
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNI 77
VL VD DF+++ L +ALR+F R+ GEAQK++R++E F+QRYC NP +
Sbjct: 718 VLDCVVDEMDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEV 771
>sp|Q3TES0|IQEC3_MOUSE IQ motif and SEC7 domain-containing protein 3 OS=Mus musculus
GN=Iqsec3 PE=1 SV=1
Length = 1195
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNI 77
VL VD DF+++ L +ALR+F R+ GEAQK++R++E F+QRYC NP +
Sbjct: 720 VLDCVVDEMDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEV 773
>sp|Q9UPP2|IQEC3_HUMAN IQ motif and SEC7 domain-containing protein 3 OS=Homo sapiens
GN=IQSEC3 PE=2 SV=3
Length = 1182
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNI 77
VL VD DF+ + L +ALR+F R+ GEAQK++R++E F+QRYC NP +
Sbjct: 716 VLDCVVDEMDFSSMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEV 769
>sp|Q8R0S2|IQEC1_MOUSE IQ motif and SEC7 domain-containing protein 1 OS=Mus musculus
GN=Iqsec1 PE=1 SV=2
Length = 961
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNI 77
VL VD DF+ + L +ALR+F R+ GEAQK++R++E F+QRYC NP +
Sbjct: 587 VLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPGV 640
>sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens
GN=IQSEC1 PE=1 SV=1
Length = 963
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNI 77
VL VD DF+ + L +ALR+F R+ GEAQK++R++E F+QRYC NP +
Sbjct: 589 VLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGV 642
>sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protein 2 OS=Homo sapiens
GN=IQSEC2 PE=1 SV=1
Length = 1478
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNP 75
VL VD DF+ + L ALR+F R+ GEAQK++R++E F+QRYC NP
Sbjct: 808 VLDCVVDEMDFSSMDLDDALRKFQSHIRVQGEAQKVERLIEAFSQRYCVCNP 859
>sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2 OS=Mus musculus
GN=Iqsec2 PE=1 SV=3
Length = 1478
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNP 75
VL VD DF+ + L ALR+F R+ GEAQK++R++E F+QRYC NP
Sbjct: 808 VLDCVVDEMDFSSMDLDDALRKFQSHIRVQGEAQKVERLIEAFSQRYCVCNP 859
>sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana
GN=GN PE=1 SV=1
Length = 1451
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
VL F DF + L ALR FL +FRLPGE+QKI R++E F++RY +P I N
Sbjct: 627 VLNEFAGTFDFQYMNLDTALRLFLETFRLPGESQKIQRVLEAFSERYYMQSPEILAN 683
>sp|Q9FLY5|GNL1_ARATH ARF guanine-nucleotide exchange factor GNL1 OS=Arabidopsis thaliana
GN=GNL1 PE=3 SV=1
Length = 1443
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTN 80
VL F DF ++ L ALR F+ +F+L GEAQKI R++E F++RY + +P+I +
Sbjct: 627 VLHEFAKTFDFQNMNLATALRLFVGTFKLSGEAQKIHRVLEAFSERYYEQSPHILID 683
>sp|P47102|GEA1_YEAST ARF guanine-nucleotide exchange factor 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GEA1 PE=1
SV=1
Length = 1408
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRY 70
S+L+ F+DL DF L + +A+R L FRLPGE+Q+I+R++E F+ +Y
Sbjct: 604 SLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKY 651
>sp|Q6P1I6|PSD2_MOUSE PH and SEC7 domain-containing protein 2 OS=Mus musculus GN=Psd2
PE=2 SV=1
Length = 770
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 28 FVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNTAHTHRL 87
++ DF+ L L +ALR FL +F L GE Q+ +R++ F++RYCQ NP+ T+ H L
Sbjct: 347 YLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTL 406
>sp|P39993|GEA2_YEAST ARF guanine-nucleotide exchange factor 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GEA2 PE=1
SV=1
Length = 1459
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 23 SVLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQ 72
S+L ++ L DF+ L + +A+R L FRLPGE+Q+I+R++E F+ YC+
Sbjct: 622 SLLNEYIRLFDFSGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCE 671
>sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2
Length = 1859
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
+L +FV F L L +ALR +L +FRLPGEA I R++E F +R+ N + F N+
Sbjct: 763 LLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEAFTERWMNCNGSPFANS 820
>sp|Q9BQI7|PSD2_HUMAN PH and SEC7 domain-containing protein 2 OS=Homo sapiens GN=PSD2
PE=2 SV=3
Length = 771
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 28 FVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNTAHTHRL 87
++ DF+ L L ALR FL +F L GE Q+ +R++ F++RYCQ NP+ T+ H L
Sbjct: 350 YLSFFDFSGLTLDGALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTL 409
>sp|Q9P7R8|YHV3_SCHPO Uncharacterized protein C211.03 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC211.03c PE=1 SV=1
Length = 1462
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPN 76
+L AF+ DF + +ALR L SFRLPGE+Q I+R++E F+ Y NP+
Sbjct: 612 ILNAFISAFDFKGKRIDEALRLLLQSFRLPGESQLIERVLETFSHYYMSANPD 664
>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Cricetulus griseus GN=GBF1 PE=2 SV=1
Length = 1856
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
+L +FV F L L +ALR +L +FRLPGEA I R++E F + + N + F N+
Sbjct: 761 LLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIHRLLEAFTEHWRSCNGSPFANS 818
>sp|Q2PFD7|PSD3_MOUSE PH and SEC7 domain-containing protein 3 OS=Mus musculus GN=Psd3
PE=1 SV=2
Length = 1037
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 24 VLRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNTAH 83
V ++ DFT + L Q+LR FL +F L GE Q+ +R++ F+ RY NP+ T+
Sbjct: 606 VAEEYLKFFDFTGMTLDQSLRYFLKAFSLVGETQERERVLIHFSNRYFSCNPDTITSKDG 665
Query: 84 THRL 87
H L
Sbjct: 666 VHCL 669
>sp|Q10491|SEC74_SCHPO Arf guanine nucleotide exchange factor sec74 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sec74 PE=1 SV=2
Length = 928
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 25 LRAFVDLHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLNPNIFTNT 81
LR ++ + +F + L ALR+FL + LP E Q+IDR++ F+ +Y NP+++ ++
Sbjct: 309 LRKYLSVVNFKCISLDMALRKFLAVYVLPNETQQIDRVLSTFSDQYFHCNPDLYDSS 365
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.140 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,683,371
Number of Sequences: 539616
Number of extensions: 972226
Number of successful extensions: 2400
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2328
Number of HSP's gapped (non-prelim): 73
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)