Query psy17824
Match_columns 272
No_of_seqs 243 out of 1389
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 23:57:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wfi_A Peptidyl-prolyl CIS-tra 100.0 6.1E-58 2.1E-62 391.0 21.4 173 3-175 7-179 (179)
2 2he9_A NK-tumor recognition pr 100.0 1.4E-57 4.8E-62 392.4 21.3 175 3-177 17-191 (192)
3 1a58_A Cyclophilin; isomerase, 100.0 1.9E-57 6.4E-62 387.4 21.2 173 4-176 5-177 (177)
4 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.9E-55 6.4E-60 373.8 20.4 171 4-176 2-172 (173)
5 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.5E-55 8.4E-60 372.1 19.0 169 4-175 2-170 (170)
6 3pmp_A Cyclophilin A; peptidyl 100.0 1.1E-54 3.8E-59 366.2 20.7 163 4-176 1-164 (164)
7 2poy_A Peptidyl-prolyl CIS-tra 100.0 7.1E-55 2.4E-59 373.8 19.6 170 3-174 17-186 (186)
8 2haq_A Cyclophilin; rotamase, 100.0 6E-55 2.1E-59 369.9 18.4 163 3-175 9-172 (172)
9 1mzw_A Cyclophilin H, U-snRNP- 100.0 5.5E-55 1.9E-59 372.1 18.2 170 3-175 8-177 (177)
10 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.9E-54 9.9E-59 363.9 20.6 162 4-175 2-164 (165)
11 2cmt_A Peptidyl-prolyl CIS-tra 100.0 4.2E-54 1.4E-58 365.0 20.5 164 3-176 8-172 (172)
12 2r99_A Peptidyl-prolyl CIS-tra 100.0 5.2E-54 1.8E-58 364.8 20.9 164 3-176 9-173 (173)
13 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.2E-54 7.6E-59 371.4 17.8 169 4-181 14-183 (188)
14 4fru_A Cyclophilin B, peptidyl 100.0 9.8E-54 3.4E-58 366.9 18.3 170 4-181 11-180 (185)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 4.2E-53 1.5E-57 362.4 19.6 165 3-176 20-184 (184)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.8E-53 2.3E-57 363.5 20.7 165 3-176 25-191 (193)
17 1z81_A Cyclophilin; structural 100.0 2.9E-53 1E-57 373.6 18.7 170 3-175 57-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 2.9E-52 1E-56 353.8 13.6 161 7-175 4-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 7.3E-52 2.5E-56 366.6 15.7 178 3-182 12-213 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 3E-51 1E-55 383.6 20.3 175 4-179 14-188 (370)
21 2poe_A Cyclophilin-like protei 100.0 4.1E-50 1.4E-54 344.1 16.1 162 8-182 15-181 (185)
22 3bo7_A Peptidyl-prolyl CIS-tra 100.0 5.8E-50 2E-54 347.5 16.2 155 16-182 12-179 (201)
23 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.4E-49 4.8E-54 343.3 17.8 157 15-183 24-182 (197)
24 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.3E-49 4.6E-54 334.2 15.9 153 16-180 6-160 (161)
25 2b71_A Cyclophilin-like protei 100.0 2.2E-49 7.5E-54 342.0 17.4 158 4-178 37-195 (196)
26 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.2E-49 7.6E-54 334.3 17.0 155 4-175 10-165 (166)
27 1w74_A Peptidyl-prolyl CIS-tra 100.0 9.3E-49 3.2E-53 337.0 18.8 156 16-175 29-191 (191)
28 2fu0_A Cyclophilin, putative; 100.0 6.2E-49 2.1E-53 329.7 16.7 148 16-175 11-159 (160)
29 2a2n_A Peptidylprolyl isomeras 100.0 5.7E-49 1.9E-53 334.5 14.4 159 4-174 15-175 (176)
30 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3E-48 1E-52 336.2 16.9 160 4-180 10-170 (203)
31 2hq6_A Serologically defined c 100.0 9.3E-48 3.2E-52 329.4 16.4 159 4-180 23-184 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 3.3E-47 1.1E-51 336.2 15.6 162 4-183 20-200 (232)
33 1v9t_A Cyclophilin B; beta bar 100.0 1.6E-46 5.5E-51 316.9 14.6 154 3-175 2-165 (166)
34 1lop_A Cyclophilin A; rotamase 100.0 3E-46 1E-50 314.7 11.5 147 14-175 3-163 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.5E-45 5E-50 311.4 14.7 152 5-175 3-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.2E-38 4.2E-43 297.0 7.8 139 4-155 169-345 (369)
37 2nnz_A Hypothetical protein; b 95.5 0.032 1.1E-06 45.6 6.9 106 10-153 32-143 (153)
38 3kop_A Uncharacterized protein 93.4 0.43 1.5E-05 39.8 8.9 33 8-42 22-55 (188)
39 1zx8_A Hypothetical protein TM 85.3 3.1 0.00011 33.0 7.5 97 20-153 22-124 (136)
40 2k9u_B Filamin-binding LIM pro 34.1 26 0.00088 19.5 2.0 15 115-129 6-20 (26)
41 1x7f_A Outer surface protein; 32.0 25 0.00086 32.5 2.8 51 102-153 325-376 (385)
42 2p0o_A Hypothetical protein DU 31.4 22 0.00076 32.7 2.3 51 102-153 299-350 (372)
No 1
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=6.1e-58 Score=390.98 Aligned_cols=173 Identities=68% Similarity=1.215 Sum_probs=167.6
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..||+|||||+|++|++|+|+|+||++.||+||+||+.||+|+.|.|+..++.+||+|+.||||+|+|||||||+..++|
T Consensus 7 ~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 7 VQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCC
Confidence 36999999999999999999999999999999999999999999988878889999999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+++.++||..|++|++.+.|+.+|+|||||.++++|+||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~ 166 (179)
T 2wfi_A 87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASK 166 (179)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSC
T ss_pred CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred CccCeEEeEeeee
Q psy17824 163 PLQDVRVVKCNEL 175 (272)
Q Consensus 163 P~~~i~I~~cg~l 175 (272)
|..+|+|.+||+|
T Consensus 167 P~~~v~I~~~G~l 179 (179)
T 2wfi_A 167 PFAEVRILSCGEL 179 (179)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999986
No 2
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-57 Score=392.35 Aligned_cols=175 Identities=69% Similarity=1.153 Sum_probs=168.1
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|||||+|++|++|+|+|+||++.||+||+||+.||+|+.|+|+..++.+||+|+.||||+|+|||||||+..++|
T Consensus 17 ~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 17 RGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp --CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 57999999999999999999999999999999999999999999988888889999999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+++.++||..|++|++.++|+.+|+|||||.++++|+||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 97 ~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 176 (192)
T 2he9_A 97 KGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASR 176 (192)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred CccCeEEeEeeeecc
Q psy17824 163 PLQDVRVVKCNELVL 177 (272)
Q Consensus 163 P~~~i~I~~cg~l~~ 177 (272)
|..+|+|.+||+|.+
T Consensus 177 P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 177 PYADVRVIDCGVLAT 191 (192)
T ss_dssp BSSCEEEEEEEECC-
T ss_pred CcCCeEEEEeEEEcc
Confidence 999999999999964
No 3
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.9e-57 Score=387.42 Aligned_cols=173 Identities=62% Similarity=1.072 Sum_probs=165.9
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.||+|||||.|+++++|+|+|+||++.||+||+||+.||+|+.|.|+..++.+||+|+.||||+|+|||||||+..++|+
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 69999999999999999999999999999999999999999888775545667999999999999999999999889999
Q ss_pred CCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCC
Q psy17824 84 GGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRP 163 (272)
Q Consensus 84 gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P 163 (272)
++.++||..|++|++.+.|+.+|+|||||.++++|+||||||+.++||||+.|+|||+|++||+||++|+.++++.+++|
T Consensus 85 gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P 164 (177)
T 1a58_A 85 GGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRP 164 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred ccCeEEeEeeeec
Q psy17824 164 LQDVRVVKCNELV 176 (272)
Q Consensus 164 ~~~i~I~~cg~l~ 176 (272)
..+|+|.+||+|+
T Consensus 165 ~~~v~I~~~G~l~ 177 (177)
T 1a58_A 165 LADVVILNCGELV 177 (177)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCeEEEEeEEEC
Confidence 9999999999984
No 4
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.9e-55 Score=373.78 Aligned_cols=171 Identities=54% Similarity=0.927 Sum_probs=162.2
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+|+|||||.|+++++|+|+|+||++.||+||+||+.||+++.|+|+ .++..||+|+.||||+|+|||||||+..++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCc-cCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 48999999999999999999999999999999999999998777664 34677999999999999999999999889999
Q ss_pred CCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCC
Q psy17824 84 GGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRP 163 (272)
Q Consensus 84 gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P 163 (272)
++.++||..|++|++.++|+.+|+||||+.++++|+||||||+.++||||+.|+|||+|++||+||++|+.+++ .+++|
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 159 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKP 159 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCC
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 56899
Q ss_pred ccCeEEeEeeeec
Q psy17824 164 LQDVRVVKCNELV 176 (272)
Q Consensus 164 ~~~i~I~~cg~l~ 176 (272)
..+|+|.+||+|.
T Consensus 160 ~~~v~I~~~g~l~ 172 (173)
T 2igv_A 160 VKDCMIADCGQLK 172 (173)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEEEc
Confidence 9999999999984
No 5
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.5e-55 Score=372.10 Aligned_cols=169 Identities=58% Similarity=0.991 Sum_probs=159.7
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+|+|||||.|+++++|+|+|+||++.||+||+||+.||+|+ |+|+ .++..+|+|+.||||+|+|||||||+..++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGS-RGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECT-TSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCc-cCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 589999999999999999999999999999999999999865 4442 34667799999999999999999999889999
Q ss_pred CCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCC
Q psy17824 84 GGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRP 163 (272)
Q Consensus 84 gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P 163 (272)
++.++||..|++|++.+.|+.+|+||||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.+++ .+++|
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 158 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYV 158 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCC
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred ccCeEEeEeeee
Q psy17824 164 LQDVRVVKCNEL 175 (272)
Q Consensus 164 ~~~i~I~~cg~l 175 (272)
..+|+|.+||+|
T Consensus 159 ~~~v~I~~cG~l 170 (170)
T 1qng_A 159 KRSVVITDCGEL 170 (170)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeceeC
Confidence 999999999986
No 6
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.1e-54 Score=366.21 Aligned_cols=163 Identities=48% Similarity=0.861 Sum_probs=156.0
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
.+|+|||||.|++|++|+|+|+||++.||+||+||+.||+|.. ++ |+|+.||||+|+|||||||+..+++
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQH---------GFGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccC---------CCcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 4899999999999999999999999999999999999998754 45 9999999999999999999888999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
.++.++||..|++|++.++|..+|+|+||+.++++++||||||+.++||||++|+|||+|++||+||++|+.++++ +++
T Consensus 72 ~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~ 150 (164)
T 3pmp_A 72 TGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGK 150 (164)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCC
T ss_pred CCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 799
Q ss_pred CccCeEEeEeeeec
Q psy17824 163 PLQDVRVVKCNELV 176 (272)
Q Consensus 163 P~~~i~I~~cg~l~ 176 (272)
|..+|+|.+||+|.
T Consensus 151 P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 151 TNATIKITDCGTVA 164 (164)
T ss_dssp CSSCEEEEEEEEC-
T ss_pred cccCEEEEeCeEEC
Confidence 99999999999984
No 7
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=7.1e-55 Score=373.77 Aligned_cols=170 Identities=56% Similarity=0.967 Sum_probs=160.8
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|||||.|+++++|+|+|+||++.||+||+||+.||+|+.|+|+ .++..+|+|+.||||+|+|||||||+..++|
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccc-cCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 478999999999999999999999999999999999999998888765 3577889999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+++.++||..|++|++.+.|..+|+||||+.++++|+||||||+.++||||+.|+|||+|++||+||++|+.+++ .+++
T Consensus 96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~ 174 (186)
T 2poy_A 96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGK 174 (186)
T ss_dssp SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSC
T ss_pred CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 5789
Q ss_pred CccCeEEeEeee
Q psy17824 163 PLQDVRVVKCNE 174 (272)
Q Consensus 163 P~~~i~I~~cg~ 174 (272)
|..+|+|.+||+
T Consensus 175 P~~~v~I~~cG~ 186 (186)
T 2poy_A 175 PTKSVCITASGV 186 (186)
T ss_dssp CSSCEEEEEEEC
T ss_pred CCCCEEEEeCCC
Confidence 999999999995
No 8
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=6e-55 Score=369.95 Aligned_cols=163 Identities=53% Similarity=0.879 Sum_probs=156.6
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGN 81 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~ 81 (272)
..+|+|||||.|++|++|+|+|+||++.||+||+||+.||+|.. +| |+|+.||||+|+|||||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEH---------GFGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCC---------CcccCCCEEEEEECCCEEecCCccCCC
Confidence 36899999999999999999999999999999999999998754 45 999999999999999999988899
Q ss_pred CCCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCC
Q psy17824 82 GTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMS 161 (272)
Q Consensus 82 g~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~ 161 (272)
|+++.++||..|++|++.+.|. +|+||||+.++++|+||||||+.++|+||+.|+|||+|++||+||++|+.++++.++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999998888
Q ss_pred CCccCeEEeEeeee
Q psy17824 162 RPLQDVRVVKCNEL 175 (272)
Q Consensus 162 ~P~~~i~I~~cg~l 175 (272)
+|..+|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999986
No 9
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=5.5e-55 Score=372.12 Aligned_cols=170 Identities=49% Similarity=0.846 Sum_probs=160.7
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|||||.+++|++|+|+|+||++.||+||+||+.||++..|. .++..+|+|+.||||+|+|||||||+..++|
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 84 (177)
T 1mzw_A 8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDG 84 (177)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC---cCccceECCCEEEEEECCCEEEcCCcccCCC
Confidence 4689999999999999999999999999999999999999876543 1245679999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+|+.++||..|++|++.+.|+.+|+||||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 85 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~ 164 (177)
T 1mzw_A 85 TGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNK 164 (177)
T ss_dssp CCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGC
T ss_pred CCCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred CccCeEEeEeeee
Q psy17824 163 PLQDVRVVKCNEL 175 (272)
Q Consensus 163 P~~~i~I~~cg~l 175 (272)
|..+|+|.+||+|
T Consensus 165 P~~~v~I~~cG~l 177 (177)
T 1mzw_A 165 PKLPVVISQCGEM 177 (177)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCEEEEeceeC
Confidence 9999999999986
No 10
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.9e-54 Score=363.88 Aligned_cols=162 Identities=54% Similarity=0.889 Sum_probs=155.3
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
.+|+|||||.|++|++|+|+|+||++.||+||+||+.||+|+. +| |+|+.||||+|+|||||||+..++|
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 72 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK---------GFGYKGSTFHRVIPSFMCQAGDFTNHNG 72 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC---------CccCcCCEEEEEECCCEEEeCCccCCCC
Confidence 4899999999999999999999999999999999999997654 46 9999999999999999999988899
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+++.++||..|++|++.+.|.++|+||||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.+++ .+++
T Consensus 73 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~ 151 (165)
T 2z6w_A 73 TGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGR 151 (165)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSC
T ss_pred CCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 6899
Q ss_pred CccCeEEeEeeee
Q psy17824 163 PLQDVRVVKCNEL 175 (272)
Q Consensus 163 P~~~i~I~~cg~l 175 (272)
|..+|+|.+||+|
T Consensus 152 P~~~v~I~~~g~l 164 (165)
T 2z6w_A 152 TSKKIVITDCGQL 164 (165)
T ss_dssp CSSCEEEEEEEEC
T ss_pred CCCcEEEEEeEEE
Confidence 9999999999998
No 11
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=4.2e-54 Score=365.01 Aligned_cols=164 Identities=55% Similarity=0.883 Sum_probs=155.7
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGN 81 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~ 81 (272)
..+|+|||||.+++|++|+|+|+||++.||+||+||+.||++.. ++ |+|+.||||+|+|||||||+..++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 78 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGER---------GFGYHNCCFHRVIPQFMCQGGDFVKGD 78 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCC---------CceECCCEEEEEECCCEEEcCCccCCC
Confidence 46899999999999999999999999999999999999997643 45 999999999999999999998889
Q ss_pred CCCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCC
Q psy17824 82 GTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMS 161 (272)
Q Consensus 82 g~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~ 161 (272)
|+++.++||..|++|++.+.|+.+|+||||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.+++ .++
T Consensus 79 G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~ 157 (172)
T 2cmt_A 79 GTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSG 157 (172)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTC
T ss_pred CCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 468
Q ss_pred CCccCeEEeEeeeec
Q psy17824 162 RPLQDVRVVKCNELV 176 (272)
Q Consensus 162 ~P~~~i~I~~cg~l~ 176 (272)
+|..+|+|.+||+|.
T Consensus 158 ~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 158 KVKEPVIISRCGELI 172 (172)
T ss_dssp CCSSCEEEEEEEEEC
T ss_pred CCCCCEEEEEeEeEC
Confidence 999999999999983
No 12
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5.2e-54 Score=364.82 Aligned_cols=164 Identities=51% Similarity=0.832 Sum_probs=155.8
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGN 81 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~ 81 (272)
..+|+|||||.|++|++|+|+|+||++.||+||+||+.||+|+. ++ |+|+.||||+|+|||||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK---------GFGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC---------CceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 46899999999999999999999999999999999999998754 44 999999999999999999998889
Q ss_pred CCCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCC
Q psy17824 82 GTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMS 161 (272)
Q Consensus 82 g~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~ 161 (272)
|+++.++||..|++|++.+.|+.+|+|+||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.++++ ++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~ 158 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DG 158 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TC
T ss_pred CCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 68
Q ss_pred CCccCeEEeEeeeec
Q psy17824 162 RPLQDVRVVKCNELV 176 (272)
Q Consensus 162 ~P~~~i~I~~cg~l~ 176 (272)
+|..+|+|.+||+|.
T Consensus 159 ~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 159 KPKQKVIIADCGEYV 173 (173)
T ss_dssp CCSSCEEEEEEEECC
T ss_pred CCCCCeEEEEeeeEC
Confidence 999999999999983
No 13
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.2e-54 Score=371.41 Aligned_cols=169 Identities=51% Similarity=0.874 Sum_probs=159.6
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccce-eeCcEEEEeecCceeeecCccCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLH-YLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~-Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
.+|+|||||.|++|++|+|+|+||.+.||+||+||+.||+|+. +| |+|+.||||+++|||||||+..++|
T Consensus 14 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 84 (188)
T 3ich_A 14 VTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEK---------GFGYKNSKFHRVIKDFMIQGGDFTRGDG 84 (188)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccC---------CccccCCEEEEEECCCEEEcCCccCCCC
Confidence 4689999999999999999999999999999999999998754 45 9999999999999999999888999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+|+.++||..|++|++.+.|+.+|+|||||.++++|+||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 85 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~ 164 (188)
T 3ich_A 85 TGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDK 164 (188)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CccCeEEeEeeeecccccc
Q psy17824 163 PLQDVRVVKCNELVLKSKL 181 (272)
Q Consensus 163 P~~~i~I~~cg~l~~~~~~ 181 (272)
|..+|+|.+|++|....++
T Consensus 165 P~~~v~I~~~~~l~~~~Pf 183 (188)
T 3ich_A 165 PLKDVIIADCGKIEVEKPF 183 (188)
T ss_dssp BSSCEEEEEEEEEEEEEEE
T ss_pred ECCCEEEEEeEEEecCCCC
Confidence 9999999999999544443
No 14
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=9.8e-54 Score=366.88 Aligned_cols=170 Identities=51% Similarity=0.881 Sum_probs=161.1
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+|+|||||.|+++++|+|+|+||++.||+||+||+.||++..| .+|+|+.||||+++|||||||+..+++.
T Consensus 11 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 82 (185)
T 4fru_A 11 VTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG--------FGYKDSKFHRVIKDFMIQGGDFTRGDGT 82 (185)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred cCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC--------CeEcCCEEEEeeCCCeEEECCCCCCCCC
Confidence 57899999999999999999999999999999999999976432 2699999999999999999999889999
Q ss_pred CCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCC
Q psy17824 84 GGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRP 163 (272)
Q Consensus 84 gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P 163 (272)
++.++||..|++|++.+.|+.+|+|+||+.++++++|||||++.++||||++|+|||+|++||+||++|+.++++.+++|
T Consensus 83 gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P 162 (185)
T 4fru_A 83 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKP 162 (185)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCeEEeEeeeecccccc
Q psy17824 164 LQDVRVVKCNELVLKSKL 181 (272)
Q Consensus 164 ~~~i~I~~cg~l~~~~~~ 181 (272)
..+|+|.+||+|....++
T Consensus 163 ~~~v~I~~~g~l~~~~Pf 180 (185)
T 4fru_A 163 LKDVTIADCGKIEVEKPF 180 (185)
T ss_dssp SSCEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEceEEecCCCC
Confidence 999999999999765554
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=4.2e-53 Score=362.42 Aligned_cols=165 Identities=52% Similarity=0.914 Sum_probs=156.4
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+||||+.|+++++|+|+|+||++.||+||+||+.||++..|++ |+|+.||||+++|||||||+..+++
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~--------Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG--------YKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS--------STTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc--------cCCCEEEEccCCcEEEeCCCCCCCC
Confidence 36899999999999999999999999999999999999998754433 9999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
.++.++||..|++|++.+.|+.+|+|+||+.++++++||||||+.++|+||+.|+|||+|++||+||++|+++++ .+++
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~ 170 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGK 170 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSC
T ss_pred CCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997 5789
Q ss_pred CccCeEEeEeeeec
Q psy17824 163 PLQDVRVVKCNELV 176 (272)
Q Consensus 163 P~~~i~I~~cg~l~ 176 (272)
|..+|+|.+||+|.
T Consensus 171 P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 171 TSKKITIADCGQLE 184 (184)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CcCCeEEEeCeEEC
Confidence 99999999999983
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.8e-53 Score=363.54 Aligned_cols=165 Identities=48% Similarity=0.781 Sum_probs=156.8
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|||||.|++|++|+|+|+||++.||+||+||+.||+|..|++ |+|+.||||+|+|||||||+..+++
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~--------Y~g~~FhRvi~~f~iQgGd~~~~~g 96 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG--------YKGSTFHRIIPGFMVQGGDYTAHNG 96 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSS--------STTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCc--------ccCCEEEEEeCCCEEEeCCCCCCCC
Confidence 47899999999999999999999999999999999999998754432 9999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
.++.++||..|++|++.+.|+.+|+|+||+.++++++|||||++.++|+||++|+|||+|++||+||++|+.++++ +++
T Consensus 97 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~ 175 (193)
T 3k2c_A 97 TGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQ 175 (193)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCC
T ss_pred cCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999996 689
Q ss_pred Cc--cCeEEeEeeeec
Q psy17824 163 PL--QDVRVVKCNELV 176 (272)
Q Consensus 163 P~--~~i~I~~cg~l~ 176 (272)
|. .+|+|.+||+|.
T Consensus 176 P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 176 VKKGYRIEIRDCGVLG 191 (193)
T ss_dssp CCTTCCEEEEEEEECC
T ss_pred CccCccEEEEEceEeC
Confidence 99 999999999986
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-53 Score=373.64 Aligned_cols=170 Identities=47% Similarity=0.816 Sum_probs=161.4
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|||||.|+++++|+|+|+||++.||+||+||+.||++..|.+ ++..+|+|+.||||+|+|||||||+..++|
T Consensus 57 ~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G 133 (229)
T 1z81_A 57 PSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFINHNG 133 (229)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTTSSS
T ss_pred CCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc---CCCceECCCEEEEEeCCCEEEcCCCcCCCC
Confidence 36899999999999999999999999999999999999999876543 356689999999999999999999988999
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEe--cCHHHHHHHhcCCCCCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVV--SGQNVVSHIENLPVDKM 160 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi--~G~dVl~~I~~~~~d~~ 160 (272)
+|+.++||..|++|++.+.|+.+|+|+||+.++++++||||||+.++|+||+.|+|||+|+ +||+||++|+.++++.+
T Consensus 134 ~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~ 213 (229)
T 1z81_A 134 SGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPY 213 (229)
T ss_dssp CCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTT
T ss_pred CCCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 99999999999999887
Q ss_pred -CCCccCeEEeEeeee
Q psy17824 161 -SRPLQDVRVVKCNEL 175 (272)
Q Consensus 161 -~~P~~~i~I~~cg~l 175 (272)
++|..+|+|.+||+|
T Consensus 214 ~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 214 IYKPKIPINVVECGEL 229 (229)
T ss_dssp TCCBSSCEEEEEEEEC
T ss_pred CCCCCCCeEEEeCeeC
Confidence 999999999999986
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-52 Score=353.78 Aligned_cols=161 Identities=52% Similarity=0.860 Sum_probs=121.9
Q ss_pred eEEEEEEEC--C---eeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCC
Q psy17824 7 RCYFDVEIS--D---IPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGN 81 (272)
Q Consensus 7 ~v~~di~v~--~---t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~ 81 (272)
+|||||.|+ + |++|+|+|+||++.||+||+||+.||+|..|+| |+|+.||||+|+|||||||+..++
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~--------Y~g~~fhRvi~~f~iQgGd~~~~~ 75 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEG--------YRESTFHRIIPNFMIQGGDFTRGN 75 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTS--------STTCBCCEEETTTEEEECC-----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcc--------cCCCEEEEEeCCCEEEeCCcCCCC
Confidence 899999998 5 555999999999999999999999998755432 999999999999999999988899
Q ss_pred CCCCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEec--CHHHHHHHhcCCCCC
Q psy17824 82 GTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVS--GQNVVSHIENLPVDK 159 (272)
Q Consensus 82 g~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~--G~dVl~~I~~~~~d~ 159 (272)
|+++.++||..|++|++.+.|+.+|+||||+.++++++||||||+.++||||++|+|||+|++ ||+||++|++++++.
T Consensus 76 g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~ 155 (172)
T 2c3b_A 76 GTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSS 155 (172)
T ss_dssp -----------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTT
T ss_pred CCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999999976
Q ss_pred CC-CCccCeEEeEeeee
Q psy17824 160 MS-RPLQDVRVVKCNEL 175 (272)
Q Consensus 160 ~~-~P~~~i~I~~cg~l 175 (272)
.. +|..+|+|.+||+|
T Consensus 156 ~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 156 GSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp SCCCSSSCCEEEEEEEC
T ss_pred CCccCCCCeEEEeCeeC
Confidence 55 99999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=7.3e-52 Score=366.58 Aligned_cols=178 Identities=29% Similarity=0.451 Sum_probs=154.9
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCcc--CCcc----c--e-eeCcEEEEeecCceee
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKT--TGKN----L--H-YLNIVFHRVVKGFMIQ 73 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~--~~k~----~--~-Y~g~~f~Rvi~~f~iq 73 (272)
..+|+|||||.|.+|++|+|+|+||.+.||+||+||+.||+|...+-.+ +++. + | |+|+.||||+++||||
T Consensus 12 ~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQ 91 (234)
T 2ose_A 12 GKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIV 91 (234)
T ss_dssp CSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEE
T ss_pred CCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEE
Confidence 4689999999999999999999999999999999999999976211000 0011 3 5 9999999999999999
Q ss_pred ecCccCCCCCCCCccCCCC-----CCCCCcCcCCCcceeEeeec----cCCCCCccEEEEEcCC------CCCCCCCCcE
Q psy17824 74 SGDFSVGNGTGGESIYGGT-----FEDENFELKHDEPFLLSMAN----RGKDTNGSQFFITTQP------APHLDGVHVV 138 (272)
Q Consensus 74 gGd~~~~~g~gg~s~~g~~-----~~de~~~~~h~~~G~lsm~~----~g~~s~~SqFfItl~~------~p~ld~~~~V 138 (272)
|||+..++|+|+.++||.. |+ ++.+.|..+|+||||+ .++++++||||||+.+ +||||+.|+|
T Consensus 92 gGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 92 SGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp ECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred cCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 9998889999999999987 66 6789999999999999 8999999999999999 9999999999
Q ss_pred EEEEecCHHHHHHHhcCCCCCCCCCccCeEEeEeeeecccccch
Q psy17824 139 FGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNELVLKSKLK 182 (272)
Q Consensus 139 FG~Vi~G~dVl~~I~~~~~d~~~~P~~~i~I~~cg~l~~~~~~~ 182 (272)
||+|++||+||++|+.++++.+++|..+|+|.+|++|..+++..
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p~~~~ 213 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDSSQAQ 213 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCHHHHC
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCCcccc
Confidence 99999999999999999999889999999999999998776543
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3e-51 Score=383.60 Aligned_cols=175 Identities=60% Similarity=0.982 Sum_probs=166.7
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+|+|||||.|++++.|+|+|+||++.||+||+||+.||+|+.|+|...+...+|+||.||||+|||||||||+..++|+
T Consensus 14 ~~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~ 93 (370)
T 1ihg_A 14 SNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGT 93 (370)
T ss_dssp TSCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCC
Confidence 38999999999999999999999999999999999999999999876656677999999999999999999999889999
Q ss_pred CCCccCCCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCC
Q psy17824 84 GGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRP 163 (272)
Q Consensus 84 gg~s~~g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P 163 (272)
||.++||..|++|++.+.|+.+|+|+||+.++++||||||||+.++||||+.|+|||+|++||+||++|+.++++. ++|
T Consensus 94 g~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P 172 (370)
T 1ihg_A 94 GGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKP 172 (370)
T ss_dssp CCCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEE
T ss_pred CCCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976 999
Q ss_pred ccCeEEeEeeeecccc
Q psy17824 164 LQDVRVVKCNELVLKS 179 (272)
Q Consensus 164 ~~~i~I~~cg~l~~~~ 179 (272)
..+|+|.+|+++....
T Consensus 173 ~~~v~I~~~g~l~~~~ 188 (370)
T 1ihg_A 173 AKLCVIAECGELKEGD 188 (370)
T ss_dssp SSCEEEEEEEEECTTC
T ss_pred ceeEEEEEEEEeccCc
Confidence 9999999999997543
No 21
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=4.1e-50 Score=344.07 Aligned_cols=162 Identities=41% Similarity=0.702 Sum_probs=148.6
Q ss_pred EEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCc
Q psy17824 8 CYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGES 87 (272)
Q Consensus 8 v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s 87 (272)
+++++.+. |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+. ++|+|+.+
T Consensus 15 ~~~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~s 81 (185)
T 2poe_A 15 YFQGVRII-TNYGDLKFELFCSQCPKACKNFLALS-----------ASGYYKNTIFHKNIKGFIIQGGDPT-GTGKGGES 81 (185)
T ss_dssp CCCEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTEEEEEECTTSEEEEEETT-SSSSCCCB
T ss_pred CceEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHh-----------ccCCCCCCEEEEEECCCEEEcCCCC-CCCCCCCc
Confidence 34555554 99999999999999999999999999 4678999999999999999999975 88899999
Q ss_pred cCCCCCCCCC-cCcCCCcceeEeeeccC----CCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 88 IYGGTFEDEN-FELKHDEPFLLSMANRG----KDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 88 ~~g~~~~de~-~~~~h~~~G~lsm~~~g----~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
+||..|++|. +.+.|+.+|+||||+.+ +++++||||||++++|+||+.|+|||+|++||+||++|+.++++.+++
T Consensus 82 i~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 161 (185)
T 2poe_A 82 IYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHK 161 (185)
T ss_dssp TTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSC
T ss_pred cCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCC
Confidence 9999999997 78999999999999999 999999999999999999999999999999999999999999998899
Q ss_pred CccCeEEeEeeeecccccch
Q psy17824 163 PLQDVRVVKCNELVLKSKLK 182 (272)
Q Consensus 163 P~~~i~I~~cg~l~~~~~~~ 182 (272)
|..+|+|.+|+++.++++.+
T Consensus 162 P~~~v~I~~~~i~~dPf~d~ 181 (185)
T 2poe_A 162 PIDEIIIKDIVIHSNPIADQ 181 (185)
T ss_dssp BSSCCEEEEEEEECCC----
T ss_pred cCCCeEEEEEEEECCCCCCc
Confidence 99999999999999887653
No 22
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-50 Score=347.47 Aligned_cols=155 Identities=35% Similarity=0.531 Sum_probs=139.4
Q ss_pred CeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeec-----CccCCCCCCCCccC-
Q psy17824 16 DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSG-----DFSVGNGTGGESIY- 89 (272)
Q Consensus 16 ~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgG-----d~~~~~g~gg~s~~- 89 (272)
.|++|+|+|+||++.||.||+||+.|| +.+||+|+.||||+++|||||| |+ .++|.|+.++|
T Consensus 12 ~T~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp-~~~g~gg~si~~ 79 (201)
T 3bo7_A 12 VTTQGSLNIELHADMAPRACDSFLRLC-----------AVKYFDDTIFHRCIRNFMIQGGRAELRQP-SKKKEVQQSPRS 79 (201)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTCBEEEEETTTEEEECCGGGCCC--------CCSSC
T ss_pred EeCCCCEEEEEcCCCCcHHHHHHHHHH-----------hcCccCCCEEEEeeCCCEEEcCcccccCC-CCCCCCCccccc
Confidence 489999999999999999999999999 5679999999999999999999 96 47888999999
Q ss_pred ------CCCCCCC-CcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 90 ------GGTFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 90 ------g~~~~de-~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
|..|++| ++.+.|+.+|+||||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 80 ~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 159 (201)
T 3bo7_A 80 ISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDK 159 (201)
T ss_dssp CCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSC
T ss_pred cccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCC
Confidence 8899999 478999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CccCeEEeEeeeecccccch
Q psy17824 163 PLQDVRVVKCNELVLKSKLK 182 (272)
Q Consensus 163 P~~~i~I~~cg~l~~~~~~~ 182 (272)
|..+|+|.+|++|.++++..
T Consensus 160 P~~~i~I~~~~v~~dPf~d~ 179 (201)
T 3bo7_A 160 PLKPPKVEEIIVFKNPFEDA 179 (201)
T ss_dssp BSSCCBEEEEEEEECCC---
T ss_pred cCCCeEEEEEEEEcCCccCH
Confidence 99999999999999888754
No 23
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-49 Score=343.28 Aligned_cols=157 Identities=41% Similarity=0.660 Sum_probs=148.1
Q ss_pred CCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCCCCC
Q psy17824 15 SDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFE 94 (272)
Q Consensus 15 ~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~ 94 (272)
..|++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+ .++|.|+.++||..|+
T Consensus 24 l~T~~G~I~ieL~~~~aP~tv~NF~~L~-----------~~g~Ydg~~FhRVi~~f~iQgGd~-~~~g~Gg~si~g~~f~ 91 (197)
T 1zkc_A 24 LHTNKGDLNLELHCDLTPKTCENFIRLC-----------KKHYYDGTIFHRSIRNFVIQGGDP-TGTGTGGESYWGKPFK 91 (197)
T ss_dssp EEETTEEEEEEECTTTSHHHHHHHHHHH-----------HTTTTTTEEEEEEETTTEEEECCT-TSSSSCCCBTTBSCBC
T ss_pred EEeCCccEEEEEcCCCCcHHHHHHHHHH-----------hcCCCCCCEEEEEeCCCEEEcCCC-CCCCCCCCccCCCccc
Confidence 3499999999999999999999999999 567999999999999999999997 4788999999999999
Q ss_pred CC-CcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCC-CCCccCeEEeEe
Q psy17824 95 DE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKM-SRPLQDVRVVKC 172 (272)
Q Consensus 95 de-~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~-~~P~~~i~I~~c 172 (272)
+| ++.+.|+.+|+|+||+.++++++||||||+.++|+||+.|+|||+|++||+||++|+.++++.+ ++|..+|+|.+|
T Consensus 92 dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~ 171 (197)
T 1zkc_A 92 DEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDAT 171 (197)
T ss_dssp CCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEE
T ss_pred cccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEE
Confidence 99 4789999999999999999999999999999999999999999999999999999999999887 999999999999
Q ss_pred eeecccccchh
Q psy17824 173 NELVLKSKLKA 183 (272)
Q Consensus 173 g~l~~~~~~~~ 183 (272)
++|.++++...
T Consensus 172 ~v~~dPf~d~~ 182 (197)
T 1zkc_A 172 TVFVDPYEEAD 182 (197)
T ss_dssp EEEECTTHHHH
T ss_pred EEEcCCcccHH
Confidence 99998887553
No 24
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.3e-49 Score=334.20 Aligned_cols=153 Identities=45% Similarity=0.735 Sum_probs=145.6
Q ss_pred CeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCCCCCC
Q psy17824 16 DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFED 95 (272)
Q Consensus 16 ~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~d 95 (272)
.|++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+. ++|.++.++||..|++
T Consensus 6 ~T~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~d 73 (161)
T 2ok3_A 6 HTDVGDIKIEVFCERTPKTCENFLALC-----------ASNYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFED 73 (161)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCC
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHh-----------hhcccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccc
Confidence 499999999999999999999999999 4578999999999999999999975 7888999999999999
Q ss_pred CCc-CcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCC-CCCccCeEEeEee
Q psy17824 96 ENF-ELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKM-SRPLQDVRVVKCN 173 (272)
Q Consensus 96 e~~-~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~-~~P~~~i~I~~cg 173 (272)
|.. .+.|+.+|+||||+.++++++|||||++.++||||+.|+|||+|++||+||++|++++++.+ ++|..+|+|.+|.
T Consensus 74 E~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~ 153 (161)
T 2ok3_A 74 EYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDIT 153 (161)
T ss_dssp CCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEE
T ss_pred ccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEE
Confidence 985 78999999999999999999999999999999999999999999999999999999999887 9999999999999
Q ss_pred eeccccc
Q psy17824 174 ELVLKSK 180 (272)
Q Consensus 174 ~l~~~~~ 180 (272)
++.++++
T Consensus 154 i~~~Pf~ 160 (161)
T 2ok3_A 154 IHANPFA 160 (161)
T ss_dssp EECCSCC
T ss_pred EecCCCC
Confidence 9998875
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.2e-49 Score=342.03 Aligned_cols=158 Identities=42% Similarity=0.679 Sum_probs=146.1
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.++.|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+. ++|.
T Consensus 37 ~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~-----------~~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~ 99 (196)
T 2b71_A 37 ERGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLC-----------EMGFYDNTIFHRVIPNFVIQGGDPT-GTGK 99 (196)
T ss_dssp HSCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHH-----------HTTTTTTEEEEEEETTTEEEEEETT-SSSS
T ss_pred CCcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHh-----------hcCCcCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 35777777 89999999999999999999999999 5678999999999999999999974 8889
Q ss_pred CCCccCCCCCCCCC-cCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 84 GGESIYGGTFEDEN-FELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 84 gg~s~~g~~~~de~-~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
|+.++||..|++|. ..+.|+.+|+|+||+.++++++||||||+.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 100 gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 179 (196)
T 2b71_A 100 GGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNK 179 (196)
T ss_dssp CCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCC
T ss_pred CCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCC
Confidence 99999999999995 58999999999999999999999999999999999999999999999999999999999998999
Q ss_pred CccCeEEeEeeeeccc
Q psy17824 163 PLQDVRVVKCNELVLK 178 (272)
Q Consensus 163 P~~~i~I~~cg~l~~~ 178 (272)
|..+|+|.+|.++.+|
T Consensus 180 P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 180 PIFDLKILRTSTAVNA 195 (196)
T ss_dssp BSSCCEEEEEEC----
T ss_pred CCCCeEEEEEEEecCC
Confidence 9999999999998765
No 26
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.2e-49 Score=334.30 Aligned_cols=155 Identities=44% Similarity=0.760 Sum_probs=146.9
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.++.|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+ .+++.
T Consensus 10 ~~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~fhRvi~~f~iQgGd~-~~~g~ 72 (166)
T 2x7k_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA-----------RRGYYNGTKFHRIIKDFMIQGGDP-TGTGR 72 (166)
T ss_dssp CCSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH-----------HHTTTTTEECCEEETTTEEEECCT-TSSSS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHH-----------hcCCCCCCEEEEEECCCEEEcCCC-CCCCC
Confidence 46778887 89999999999999999999999999 567999999999999999999997 47889
Q ss_pred CCCccCCCCCCCCC-cCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 84 GGESIYGGTFEDEN-FELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 84 gg~s~~g~~~~de~-~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
++.++||..|++|. ..+.|..+|+|||||.++++++|||||++.++||||+.|+|||+|++||+||++|+.++++.+++
T Consensus 73 gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~ 152 (166)
T 2x7k_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (166)
T ss_dssp CCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSC
T ss_pred CCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 99999999999998 48999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CccCeEEeEeeee
Q psy17824 163 PLQDVRVVKCNEL 175 (272)
Q Consensus 163 P~~~i~I~~cg~l 175 (272)
|..+|+|.+|.++
T Consensus 153 P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 153 PVDDVKIIKAYPS 165 (166)
T ss_dssp BSSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEe
Confidence 9999999999886
No 27
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=9.3e-49 Score=336.99 Aligned_cols=156 Identities=42% Similarity=0.666 Sum_probs=142.8
Q ss_pred CeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccC-C---ccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCC
Q psy17824 16 DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTT-G---KNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGG 91 (272)
Q Consensus 16 ~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~-~---k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~ 91 (272)
.|++|+|+|+||++.||+||+||+.||+|+.+++... + ..+||+|+.||||+|+|||||||+ .++|+++ ||.
T Consensus 29 ~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~-~g~G~gg---~g~ 104 (191)
T 1w74_A 29 HTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP-TGTGRGG---PGY 104 (191)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT-TSSSSCC---SSC
T ss_pred EecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC-CCCCCCC---CCC
Confidence 4999999999999999999999999999998864221 1 357999999999999999999996 5677776 588
Q ss_pred CCCCC-CcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEec--CHHHHHHHhcCCCCCCCCCccCeE
Q psy17824 92 TFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVS--GQNVVSHIENLPVDKMSRPLQDVR 168 (272)
Q Consensus 92 ~~~de-~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~--G~dVl~~I~~~~~d~~~~P~~~i~ 168 (272)
.|++| ++.++|+.+|+|||||.++++|+||||||+.++||||+.|+|||+|++ ||+||++|+.++++.+++|..+|+
T Consensus 105 ~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~ 184 (191)
T 1w74_A 105 KFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVV 184 (191)
T ss_dssp CBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCE
T ss_pred ccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeE
Confidence 89999 578999999999999999999999999999999999999999999999 999999999999998899999999
Q ss_pred EeEeeee
Q psy17824 169 VVKCNEL 175 (272)
Q Consensus 169 I~~cg~l 175 (272)
|.+|+++
T Consensus 185 I~~~~i~ 191 (191)
T 1w74_A 185 IESITIS 191 (191)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999975
No 28
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=6.2e-49 Score=329.72 Aligned_cols=148 Identities=48% Similarity=0.802 Sum_probs=141.7
Q ss_pred CeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCCCCCC
Q psy17824 16 DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFED 95 (272)
Q Consensus 16 ~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~d 95 (272)
.|++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+ .++|.++.++||..|++
T Consensus 11 ~T~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~fhRvi~~f~iQgGd~-~~~g~gg~si~g~~~~d 78 (160)
T 2fu0_A 11 YTTMGDIHISLFYKECKKTVQNFSVHS-----------INGYYNNCIFHRVIKHFMVQTGDP-SGDGTGGESIWGNEFED 78 (160)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTCBCCEEETTTEEEECCT-TSSSSCCCCTTSSCBCC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHh-----------ccCccCCCEEEEEECCCEEEeCCc-CCCCCCCCcccCCCccc
Confidence 499999999999999999999999999 567999999999999999999997 57889999999999999
Q ss_pred CCc-CcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCCCccCeEEeEeee
Q psy17824 96 ENF-ELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNE 174 (272)
Q Consensus 96 e~~-~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~P~~~i~I~~cg~ 174 (272)
|.+ .+.|+++|+|+||+.++++++|||||++.++||||+.|+|||+|++||+||++|++++++.+++|..+|+|.+|.+
T Consensus 79 E~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v 158 (160)
T 2fu0_A 79 EFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKI 158 (160)
T ss_dssp CCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEE
T ss_pred cccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEE
Confidence 988 6999999999999999999999999999999999999999999999999999999999998899999999999987
Q ss_pred e
Q psy17824 175 L 175 (272)
Q Consensus 175 l 175 (272)
+
T Consensus 159 ~ 159 (160)
T 2fu0_A 159 N 159 (160)
T ss_dssp C
T ss_pred e
Confidence 5
No 29
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.7e-49 Score=334.54 Aligned_cols=159 Identities=48% Similarity=0.796 Sum_probs=149.3
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+|....++++..|++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+ .++|.
T Consensus 15 ~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~-~~~g~ 82 (176)
T 2a2n_A 15 EGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHS-----------RNGYYNGHTFHRIIKGFMIQTGDP-TGTGM 82 (176)
T ss_dssp CSCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTCBCCEEETTTEEEECCT-TSSSS
T ss_pred CCCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHh-----------hcCccCCCEEEEEECCcEEEccCC-CCCCC
Confidence 466677777888899999999999999999999999999 567899999999999999999997 57889
Q ss_pred CCCccCCCCCCCCCc-CcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCC-CCC
Q psy17824 84 GGESIYGGTFEDENF-ELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVD-KMS 161 (272)
Q Consensus 84 gg~s~~g~~~~de~~-~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d-~~~ 161 (272)
++.++||..|++|.+ .+.|+++|+|+||+.++++++|||||++.++||||+.|+|||+|++||+||++|+.++++ .++
T Consensus 83 gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 162 (176)
T 2a2n_A 83 GGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTD 162 (176)
T ss_dssp CCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTC
T ss_pred CCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCC
Confidence 999999999999988 699999999999999999999999999999999999999999999999999999999998 689
Q ss_pred CCccCeEEeEeee
Q psy17824 162 RPLQDVRVVKCNE 174 (272)
Q Consensus 162 ~P~~~i~I~~cg~ 174 (272)
+|..+|+|.+|.+
T Consensus 163 ~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 KPYEDVSIINITV 175 (176)
T ss_dssp CBSSCCBEEEEEE
T ss_pred ccCCCeEEEEEEE
Confidence 9999999999975
No 30
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3e-48 Score=336.23 Aligned_cols=160 Identities=43% Similarity=0.719 Sum_probs=149.7
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.++.|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+ .+++.
T Consensus 10 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~-----------~~g~Ydg~~FhRVi~~F~iQgGd~-~~~g~ 72 (203)
T 2k7n_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA-----------RRGYYNGTKFHRIIKDFMIQGGDP-TGTGR 72 (203)
T ss_dssp CCSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHH-----------HHTCGGGCEEEEEETTTEEEEECS-SSSSS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHH-----------hcCccCCCEEEEEeCCcEEEcCCC-CCCCC
Confidence 46778887 89999999999999999999999999 568999999999999999999997 47888
Q ss_pred CCCccCCCCCCCCC-cCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHHHHHhcCCCCCCCC
Q psy17824 84 GGESIYGGTFEDEN-FELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSR 162 (272)
Q Consensus 84 gg~s~~g~~~~de~-~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~~~d~~~~ 162 (272)
++.++|+..|++|. +.++|..+|+|+|||.++++++|||||++.++||||++|+|||+|++||+||++|+.++++.+++
T Consensus 73 gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~ 152 (203)
T 2k7n_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (203)
T ss_dssp CCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTE
T ss_pred CCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 99999999999998 58999999999999999999999999999999999999999999999999999999999988899
Q ss_pred CccCeEEeEeeeeccccc
Q psy17824 163 PLQDVRVVKCNELVLKSK 180 (272)
Q Consensus 163 P~~~i~I~~cg~l~~~~~ 180 (272)
|..+|+|.+|+++.....
T Consensus 153 P~~~V~I~~~~v~~~~~s 170 (203)
T 2k7n_A 153 PVDDVKIIKAYPSGGGGS 170 (203)
T ss_dssp ECCCCBEEEEEECCCCCC
T ss_pred cCCCeEEEEEEEEecCCC
Confidence 999999999999965443
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=9.3e-48 Score=329.36 Aligned_cols=159 Identities=38% Similarity=0.673 Sum_probs=148.3
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.+++|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+ .++|.
T Consensus 23 ~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~-~~~g~ 85 (185)
T 2hq6_A 23 TNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLC-----------LEAYYDNTIFHRVVPGFIVQGGDP-TGTGS 85 (185)
T ss_dssp CBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHH-----------HTTTTTTEECCEEETTTEEEECCT-TSSSS
T ss_pred CCCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHh-----------hcCccCCCEEEEEECCCEEEcCCC-CCCCC
Confidence 46778887 78999999999999999999999999 467899999999999999999997 57889
Q ss_pred CCCccCCCCCCCCCc-CcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEecCHHHH--HHHhcCCCCCC
Q psy17824 84 GGESIYGGTFEDENF-ELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVSGQNVV--SHIENLPVDKM 160 (272)
Q Consensus 84 gg~s~~g~~~~de~~-~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~dVl--~~I~~~~~d~~ 160 (272)
|+.++||.+|++|.. .+.|+.+|+|+||+.++++++|||||++.++|+||++|+|||+|+ ||+|+ ++|+.++++.+
T Consensus 86 gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~ 164 (185)
T 2hq6_A 86 GGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDD 164 (185)
T ss_dssp CCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTT
T ss_pred CCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCC
Confidence 999999999999986 689999999999999999999999999999999999999999999 88774 68999999999
Q ss_pred CCCccCeEEeEeeeeccccc
Q psy17824 161 SRPLQDVRVVKCNELVLKSK 180 (272)
Q Consensus 161 ~~P~~~i~I~~cg~l~~~~~ 180 (272)
++|..+|+|.+|++|.++++
T Consensus 165 ~~P~~~v~I~~~~v~~~Pf~ 184 (185)
T 2hq6_A 165 ERPHNPHKIKSCEVLFNPFD 184 (185)
T ss_dssp SCBSSCCEEEEEEEEECTTC
T ss_pred CCCCCCeEEEEEEEeCCCCC
Confidence 99999999999999998875
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-47 Score=336.22 Aligned_cols=162 Identities=35% Similarity=0.597 Sum_probs=147.8
Q ss_pred CCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCC
Q psy17824 4 IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGT 83 (272)
Q Consensus 4 ~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 83 (272)
.++.|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+. ++|+
T Consensus 20 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~-----------~~g~Ydgt~FhRVi~~FmiQgGdp~-~~G~ 82 (232)
T 3bkp_A 20 TRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLC-----------LEGYYVNTIFHRVVKDFIVQGGDPT-GTGR 82 (232)
T ss_dssp CBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHH-----------HHTTTTTCBEEEEETTTEEEECCTT-SSSS
T ss_pred CCCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHh-----------hcCccCCCEEEEEeCCCEEEcCCCC-CCCC
Confidence 35677776 89999999999999999999999999 4679999999999999999999974 8899
Q ss_pred CCCccC--CCCCCCCCc-CcCCCcceeEeeeccCC--------------CCCccEEEEEcCCCCCCCCCCcEEEEEecCH
Q psy17824 84 GGESIY--GGTFEDENF-ELKHDEPFLLSMANRGK--------------DTNGSQFFITTQPAPHLDGVHVVFGHVVSGQ 146 (272)
Q Consensus 84 gg~s~~--g~~~~de~~-~~~h~~~G~lsm~~~g~--------------~s~~SqFfItl~~~p~ld~~~~VFG~Vi~G~ 146 (272)
|+.++| |..|++|.. .+.|+.+|+|+||+.++ ++++|||||||.++||||+.|+|||+|+ ||
T Consensus 83 Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~ 161 (232)
T 3bkp_A 83 GGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GH 161 (232)
T ss_dssp CCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GG
T ss_pred CCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eC
Confidence 999999 889999986 78999999999999987 6999999999999999999999999999 77
Q ss_pred HH--HHHHhcCCCCCCCCCccCeEEeEeeeecccccchh
Q psy17824 147 NV--VSHIENLPVDKMSRPLQDVRVVKCNELVLKSKLKA 183 (272)
Q Consensus 147 dV--l~~I~~~~~d~~~~P~~~i~I~~cg~l~~~~~~~~ 183 (272)
+| |++|+.++++.+++|..+|+|.+|++|.++++...
T Consensus 162 ~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 162 TLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp GHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCC
T ss_pred chHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhh
Confidence 65 89999999998999999999999999999987654
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.6e-46 Score=316.93 Aligned_cols=154 Identities=29% Similarity=0.433 Sum_probs=138.9
Q ss_pred CCCCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCC
Q psy17824 3 LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNG 82 (272)
Q Consensus 3 ~~~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g 82 (272)
..+|+|+|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+....+
T Consensus 2 ~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~ 65 (166)
T 1v9t_A 2 KGDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQGGGFTEQMQ 65 (166)
T ss_dssp CCSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH-----------HTTTTTTCBEEEEETTTEEEESSBCTTCC
T ss_pred CCCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHh-----------ccCCCCCCEEEEEECCcEEEcCCcCcCCC
Confidence 468999998 89999999999999999999999999 56799999999999999999999854432
Q ss_pred CCCCccCCCCCCCCCcCcCCCcceeEeeecc-CCCCCccEEEEEcCCCCCCCCC-----CcEEEEEecCHHHHHHHhcCC
Q psy17824 83 TGGESIYGGTFEDENFELKHDEPFLLSMANR-GKDTNGSQFFITTQPAPHLDGV-----HVVFGHVVSGQNVVSHIENLP 156 (272)
Q Consensus 83 ~gg~s~~g~~~~de~~~~~h~~~G~lsm~~~-g~~s~~SqFfItl~~~p~ld~~-----~~VFG~Vi~G~dVl~~I~~~~ 156 (272)
...++.+|++|.....|+.+|+||||+. +|++++||||||+.++||||+. |+|||+|++||+||++|+.++
T Consensus 66 ---~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 142 (166)
T 1v9t_A 66 ---QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVP 142 (166)
T ss_dssp ---BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSC
T ss_pred ---CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCC
Confidence 2345778999987666677999999997 6999999999999999999998 999999999999999999999
Q ss_pred CCC----CCCCccCeEEeEeeee
Q psy17824 157 VDK----MSRPLQDVRVVKCNEL 175 (272)
Q Consensus 157 ~d~----~~~P~~~i~I~~cg~l 175 (272)
++. +++|..+|+|.+|.++
T Consensus 143 ~~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 143 THDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EEEETTEEEEESSCCBEEEEEEC
T ss_pred CCCCCccCCCcCCCeEEEEEEEe
Confidence 976 4799999999999986
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=3e-46 Score=314.74 Aligned_cols=147 Identities=30% Similarity=0.462 Sum_probs=133.4
Q ss_pred ECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCCCC
Q psy17824 14 ISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTF 93 (272)
Q Consensus 14 v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~ 93 (272)
+..|++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+|+|||||||+..+. +.+++|.+|
T Consensus 3 ~l~T~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~ 68 (164)
T 1lop_A 3 TFHTNHGDIVIKTFDDKAPETVKNFLDYC-----------REGFYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPI 68 (164)
T ss_dssp EEEETTEEEEEEECTTTSHHHHHHHHHHH-----------HTTTTTTEECCEEETTTEEEESSEETTT---EECCCCCCB
T ss_pred EEEeCCCCEEEEEeCCCCcHHHHHHHHHH-----------hcCCCCCCEEEEEeCCceEecCCcccCC---CcCCCCCcc
Confidence 34599999999999999999999999999 5679999999999999999999986443 456788999
Q ss_pred CCCCcC-cCCCcceeEeeec-cCCCCCccEEEEEcCCCCCCCCC--------CcEEEEEecCHHHHHHHhcCCCCC----
Q psy17824 94 EDENFE-LKHDEPFLLSMAN-RGKDTNGSQFFITTQPAPHLDGV--------HVVFGHVVSGQNVVSHIENLPVDK---- 159 (272)
Q Consensus 94 ~de~~~-~~h~~~G~lsm~~-~g~~s~~SqFfItl~~~p~ld~~--------~~VFG~Vi~G~dVl~~I~~~~~d~---- 159 (272)
++|... +.| .+|+||||+ .++++++|||||++.++||||+. |+|||+|++||+||++|+.++++.
T Consensus 69 ~dE~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~ 147 (164)
T 1lop_A 69 KNEANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMH 147 (164)
T ss_dssp CCCCCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTE
T ss_pred cccccccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCcccc
Confidence 999875 555 699999997 57999999999999999999997 999999999999999999999975
Q ss_pred CCCCccCeEEeEeeee
Q psy17824 160 MSRPLQDVRVVKCNEL 175 (272)
Q Consensus 160 ~~~P~~~i~I~~cg~l 175 (272)
+++|..+|+|.+|+++
T Consensus 148 ~~~P~~~v~I~~~~v~ 163 (164)
T 1lop_A 148 QDVPKEDVIIESVTVS 163 (164)
T ss_dssp EEEESSCCEEEEEEEC
T ss_pred CCCcCCCeEEEEEEEe
Confidence 5899999999999987
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.5e-45 Score=311.40 Aligned_cols=152 Identities=30% Similarity=0.448 Sum_probs=135.5
Q ss_pred CCeEEEEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCC
Q psy17824 5 RPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTG 84 (272)
Q Consensus 5 ~p~v~~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~g 84 (272)
+|.|.|+ |++|+|+|+||++.||+||+||+.|| +.+||+|+.||||+++|||||||+..+.
T Consensus 3 ~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~-----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--- 63 (167)
T 3s6m_A 3 GSMVELH-----TNHGVIKLELDEAKAPKTVENFLNYV-----------KKGHYDGTIFHRVINGFMIQGGGFEPGL--- 63 (167)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH-----------HHTTTTTEECCEEETTTEEEESSEETTT---
T ss_pred CcEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHh-----------hhcccCCCEeEEecCCcEEEeccccCCC---
Confidence 5777776 99999999999999999999999999 5689999999999999999999986443
Q ss_pred CCccCCCCCCCCCcCcCCCcceeEeeec-cCCCCCccEEEEEcCCCCCCCCC--------CcEEEEEecCHHHHHHHhcC
Q psy17824 85 GESIYGGTFEDENFELKHDEPFLLSMAN-RGKDTNGSQFFITTQPAPHLDGV--------HVVFGHVVSGQNVVSHIENL 155 (272)
Q Consensus 85 g~s~~g~~~~de~~~~~h~~~G~lsm~~-~g~~s~~SqFfItl~~~p~ld~~--------~~VFG~Vi~G~dVl~~I~~~ 155 (272)
+...++.+|++|.....++.+|+||||+ .++++++|||||++.+++|||+. |+|||+|++||+||++|+++
T Consensus 64 ~~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~ 143 (167)
T 3s6m_A 64 KQKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAV 143 (167)
T ss_dssp EECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTS
T ss_pred CCCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcC
Confidence 2345677888886544445799999999 67999999999999999999998 99999999999999999999
Q ss_pred CCCC----CCCCccCeEEeEeeee
Q psy17824 156 PVDK----MSRPLQDVRVVKCNEL 175 (272)
Q Consensus 156 ~~d~----~~~P~~~i~I~~cg~l 175 (272)
+++. +++|..+|+|.+|.+|
T Consensus 144 ~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 144 KTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp CBBC---CBTCBSSCCEEEEEEEC
T ss_pred CcCCCcccCCCcCCCeEEEEEEEC
Confidence 9987 6899999999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-38 Score=296.96 Aligned_cols=139 Identities=27% Similarity=0.380 Sum_probs=120.4
Q ss_pred CCCeEEEEEEECC---eeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCC
Q psy17824 4 IRPRCYFDVEISD---IPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVG 80 (272)
Q Consensus 4 ~~p~v~~di~v~~---t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~ 80 (272)
.++.|.|++.+.. ++.|+|+|+||++.||+||+||+.|| +.+||+|+.|||| +||||||||+. +
T Consensus 169 gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~-----------~~GfYdGt~FHRV-~gFmIQgGDp~-g 235 (369)
T 3rfy_A 169 GRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLV-----------ERHFYDGMEIQRS-DGFVVQTGDPE-G 235 (369)
T ss_dssp SEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHH-----------HTTTTTTEECEEE-EEEEECCCCCC-C
T ss_pred CCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHh-----------hcCCcCCCeeeee-CCeeEecCCCC-C
Confidence 3455556655432 46999999999999999999999999 5789999999999 99999999984 5
Q ss_pred CCCC---------------------CCccCCCCCCCCCc-----CcCCCcceeEeeecc--CCCCCccEEEEEc------
Q psy17824 81 NGTG---------------------GESIYGGTFEDENF-----ELKHDEPFLLSMANR--GKDTNGSQFFITT------ 126 (272)
Q Consensus 81 ~g~g---------------------g~s~~g~~~~de~~-----~~~h~~~G~lsm~~~--g~~s~~SqFfItl------ 126 (272)
+|.| +.++|+..|+++++ .++|+.+|+|+||+. ++|+++||||||+
T Consensus 236 ~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~ 315 (369)
T 3rfy_A 236 PAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELT 315 (369)
T ss_dssp CCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEEC
T ss_pred CCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccC
Confidence 5554 45778888888764 788999999999998 8999999999999
Q ss_pred -CCCCCCCCCCcEEEEEecCHHHHHHHhcC
Q psy17824 127 -QPAPHLDGVHVVFGHVVSGQNVVSHIENL 155 (272)
Q Consensus 127 -~~~p~ld~~~~VFG~Vi~G~dVl~~I~~~ 155 (272)
.+.+|||++|+|||+|++||+||++|+..
T Consensus 316 ~~~~~~LDgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 316 PSNSNILDGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp SCCCSSSCSCEEEEEEEEESTTGGGGCCTT
T ss_pred CCCCcccCCCeeEEEEEecCHHHHHHHhCC
Confidence 47899999999999999999999999874
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=95.52 E-value=0.032 Score=45.57 Aligned_cols=106 Identities=15% Similarity=0.083 Sum_probs=60.0
Q ss_pred EEEEECCeeceeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccC
Q psy17824 10 FDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIY 89 (272)
Q Consensus 10 ~di~v~~t~~G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~ 89 (272)
+.|.+++ ..++++|+.+.||.||+.|+++-- -+..-..|- ..++--+|- .
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP-------l~~~~~~~g-~E~y~~lp~----------~--------- 81 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALP-------IKSTANRWG-DEIYFTTQV----------A--------- 81 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCS-------EEEEEEEET-TEEEECCSC----------C---------
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCC-------cEEEHHhhC-CcEEEECCC----------C---------
Confidence 4455555 579999999999999999999871 000111221 111111110 0
Q ss_pred CCCCCCCCcCcCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCC------CCcEEEEEecCHHHHHHHh
Q psy17824 90 GGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDG------VHVVFGHVVSGQNVVSHIE 153 (272)
Q Consensus 90 g~~~~de~~~~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~------~~~VFG~Vi~G~dVl~~I~ 153 (272)
.... |+. ......|-|++-..+. .|.|-.++.|...+ .-.+||+|++|++.|..|.
T Consensus 82 -l~~~-en~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 82 -VEKE-ENS-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp -CCCS-SCC-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred -CCCC-CCC-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 0010 111 1233577777755443 37777887753322 2478999999988776543
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=93.36 E-value=0.43 Score=39.83 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=25.4
Q ss_pred EEEEEEECCeece-eEEEEEcCCCChhHHHHHHHHh
Q psy17824 8 CYFDVEISDIPLG-RIVFELYSDICPITCENFRALC 42 (272)
Q Consensus 8 v~~di~v~~t~~G-~IvIeL~~d~aP~t~~nF~~L~ 42 (272)
.|+.|.+.. .| .++.+|..+.||.||+.|..+-
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC
Confidence 356665543 24 4889999999999999999976
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=85.31 E-value=3.1 Score=33.04 Aligned_cols=97 Identities=16% Similarity=0.089 Sum_probs=55.6
Q ss_pred eeEEEEEcCCCChhHHHHHHHHhcccCCCCccCCccceeeCcEEEEeecCceeeecCccCCCCCCCCccCCCCCCCCCcC
Q psy17824 20 GRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFE 99 (272)
Q Consensus 20 G~IvIeL~~d~aP~t~~nF~~L~~g~~g~g~~~~k~~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~~ 99 (272)
..++++|+.. |.|+..|.++-- -++....| |..+|-..|-.+ .. +++..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LP-------l~~~~~~~-g~E~y~~~p~~l-~~--------------------~e~~~ 70 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIP-------FESVVNTW-GEEIYFSTPVNV-QK--------------------MENPR 70 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCS-------EEEECEES-SSEEEEECSCCC-CC--------------------CSSEE
T ss_pred cEEEEEEcCC--HHHHHHHHHHCC-------cEEEHHHh-CCcEEEECCccC-CC--------------------CCCCC
Confidence 4689999754 889999999871 11122334 234433333211 00 01111
Q ss_pred cCCCcceeEeeeccCCCCCccEEEEEcCCCCCCCC------CCcEEEEEecCHHHHHHHh
Q psy17824 100 LKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDG------VHVVFGHVVSGQNVVSHIE 153 (272)
Q Consensus 100 ~~h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~------~~~VFG~Vi~G~dVl~~I~ 153 (272)
.-...|-|+.-..+.+ |.|-.++.|...+ .-++||+|.+|++.|..+.
T Consensus 71 -~~~~~GDIaYw~pgg~-----LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 71 -EVVEIGDVGYWPPGKA-----LCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp -SSBCTTEEEEEGGGTE-----EEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred -ccCCCCcEEEeCCCCE-----EEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 1124677776555443 7787887764432 3589999999987775543
No 40
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=34.13 E-value=26 Score=19.48 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=10.6
Q ss_pred CCCCccEEEEEcCCC
Q psy17824 115 KDTNGSQFFITTQPA 129 (272)
Q Consensus 115 ~~s~~SqFfItl~~~ 129 (272)
.....|..||||.+.
T Consensus 6 eKR~aSSvFITLapp 20 (26)
T 2k9u_B 6 EKRVASSVFITLAPP 20 (26)
T ss_dssp SSSCEEEEEEEECCS
T ss_pred hhheeeeEEEEecCc
Confidence 344567799999863
No 41
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.03 E-value=25 Score=32.54 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=41.6
Q ss_pred CCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEec-CHHHHHHHh
Q psy17824 102 HDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVS-GQNVVSHIE 153 (272)
Q Consensus 102 h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~-G~dVl~~I~ 153 (272)
...+|.|.+.|........+.-|++.+.|. |++.-|+|+|++ -+.+|+-|.
T Consensus 325 ~r~rGdItIdN~~ygRY~GElQI~l~dlp~-d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 325 LQERGQVVIGNNSFGKYKGELQIILKEMPI-DERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEECSCBCC-CTTEEEEEEECGGGGGGGGGCC
T ss_pred cccCCcEEEeCCCccccccEeeEEcccCCC-CCCeeEEEEECHHHHHHHHhcC
Confidence 356899999987766667789999999884 788899999996 567777765
No 42
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=31.37 E-value=22 Score=32.75 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=41.9
Q ss_pred CCcceeEeeeccCCCCCccEEEEEcCCCCCCCCCCcEEEEEec-CHHHHHHHh
Q psy17824 102 HDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHVVFGHVVS-GQNVVSHIE 153 (272)
Q Consensus 102 h~~~G~lsm~~~g~~s~~SqFfItl~~~p~ld~~~~VFG~Vi~-G~dVl~~I~ 153 (272)
...+|.|.+.|........+.-|++.+.| -|++.-|+|+|++ -+.+|+-|.
T Consensus 299 ~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 299 ARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred cccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 35689999998776666778999999998 5788899999997 567777765
Done!