RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17824
         (272 letters)



>d1a33a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Nematode (Brugia
           malayi) [TaxId: 6279]}
          Length = 174

 Score =  191 bits (486), Expect = 4e-62
 Identities = 108/172 (62%), Positives = 127/172 (73%)

Query: 5   RPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFH 64
           R R + DV I     GRIV ELY+DI P TC NF  LCTG  G GK +GK LHY    FH
Sbjct: 3   RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFH 62

Query: 65  RVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFI 124
           RV+K FMIQ GDF+ G+GTGGESIYGG F+DE F +KHDEPF++SMAN+G +TNGSQFFI
Sbjct: 63  RVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFI 122

Query: 125 TTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNELV 176
           TT PAPHL+ +HVVFG VVSGQ VV+ IE L  +  +RPL DV ++ C ELV
Sbjct: 123 TTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV 174


>d1qnga_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Plasmodium
           falciparum [TaxId: 5833]}
          Length = 170

 Score =  175 bits (444), Expect = 7e-56
 Identities = 96/171 (56%), Positives = 116/171 (67%), Gaps = 3/171 (1%)

Query: 5   RPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFH 64
           R + +FD+ I +   GRI+FEL+SDI P TCENFRALCTGEK   +  GKNLHY N +FH
Sbjct: 3   RSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSR--GKNLHYKNSIFH 60

Query: 65  RVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFI 124
           R++  FM Q GD + GNG+GGESIYG +F DENF +KHD+P LLSMAN G +TN SQFFI
Sbjct: 61  RIIPQFMCQGGDITNGNGSGGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFI 120

Query: 125 TTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
           T  P P LDG HVVFG V+ G NVV  +E           + V +  C EL
Sbjct: 121 TLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKS-GYVKRSVVITDCGEL 170


>d1ihga2 b.62.1.1 (A:2-196) Cyclophilin 40 isomerase domain {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 195

 Score =  174 bits (441), Expect = 4e-55
 Identities = 105/170 (61%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           PR +FDV+I    +GRIV EL++DI P T ENFRALCTGEKGIG TTGK LH+    FHR
Sbjct: 15  PRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHR 74

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           ++K FMIQ GDFS  NGTGGESIYG  FEDENF  KHD+  LLSMAN G +TNGSQFFIT
Sbjct: 75  IIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFIT 134

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
           T P PHLDG HVVFG V+ G  V   +EN+ V    +P +   + +C EL
Sbjct: 135 TVPTPHLDGKHVVFGQVIKGMGVAKILENVEVK-GEKPAKLCVIAECGEL 183


>d2cfea1 b.62.1.1 (A:1-162) Cyclophilin-like allergen Mal s 6
           {Malassezia sympodialis [TaxId: 76777]}
          Length = 162

 Score =  170 bits (431), Expect = 6e-54
 Identities = 87/167 (52%), Positives = 105/167 (62%), Gaps = 9/167 (5%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
              +FD+  +  PLG I F+L+ D+ P T  NFRALCTGEKG G             FHR
Sbjct: 2   SNVFFDITKNGAPLGTIKFKLFDDVVPKTAANFRALCTGEKGFGYA--------GSHFHR 53

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           V+  FM+Q GDF+ GNGTGG+SIYG  F DENF+LKH++P LLSMAN G +TNGSQFFIT
Sbjct: 54  VIPDFMLQGGDFTAGNGTGGKSIYGAKFADENFQLKHNKPGLLSMANAGPNTNGSQFFIT 113

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKC 172
           T     LDG HVVFG V+ G NVV  IE        +P   + + KC
Sbjct: 114 TVVTSWLDGKHVVFGEVIDGMNVVKAIEAEG-SGSGKPRSRIEIAKC 159


>d2igva1 b.62.1.1 (A:1-172) Cyclophilin (eukaryotic) {Caenorhabditis
           elegans, isoform 3 [TaxId: 6239]}
          Length = 172

 Score =  168 bits (426), Expect = 5e-53
 Identities = 92/173 (53%), Positives = 115/173 (66%), Gaps = 2/173 (1%)

Query: 3   LIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIV 62
           + R + +FD+ I     GRIV ELY D+ P T  NFRALCTGE GIGK+ GK LH+    
Sbjct: 1   MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKS-GKPLHFKGSK 59

Query: 63  FHRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQF 122
           FHR++  FMIQ GDF+ GNGTGGESIYG  F DENF+ KH  P +LSMAN G +TNGSQF
Sbjct: 60  FHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQF 119

Query: 123 FITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
           F+ T     LDG HVVFG VV G +VV  +E+    +  +P++D  +  C +L
Sbjct: 120 FLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNG-SQSGKPVKDCMIADCGQL 171


>d2z6wa1 b.62.1.1 (A:2-165) Mitochondrial peptidyl-prolyl cis-trans
           isomerase, cyclophilin F {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 164

 Score =  162 bits (411), Expect = 6e-51
 Identities = 89/170 (52%), Positives = 107/170 (62%), Gaps = 9/170 (5%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           P  Y DV+ +  PLGR+V EL +D+ P T ENFRALCTGEKG          Y    FHR
Sbjct: 3   PLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGF--------GYKGSTFHR 54

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           V+  FM Q+GDF+  NGTGG+SIYG  F DENF LKH  P +LSMAN G +TNGSQFFI 
Sbjct: 55  VIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFIC 114

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
           T     LDG HVVFGHV+ G +VV  IE+    K  R  + + +  C +L
Sbjct: 115 TIKTDWLDGKHVVFGHVIEGMDVVKKIESFG-SKSGRTSKKIVITDCGQL 163


>d1qoia_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Human (Homo
           sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20
           [TaxId: 9606]}
          Length = 173

 Score =  156 bits (396), Expect = 1e-48
 Identities = 83/170 (48%), Positives = 104/170 (61%), Gaps = 3/170 (1%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           P  +FDV I    +GR+  EL++D+ P T ENFR  CTGE    +  G  + Y    FHR
Sbjct: 7   PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEF---RKDGVPIGYKGSTFHR 63

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           V+K FMIQ GDF  G+GTG  SIY G F DENF+L+H  P LLSMAN G  TNG QFFIT
Sbjct: 64  VIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFIT 123

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
                 LDG HVVFG ++ G  V+  IEN+P    ++P   V + +C E+
Sbjct: 124 CSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 173


>d1xo7a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Trypanosoma cruzi
           [TaxId: 5693]}
          Length = 166

 Score =  156 bits (394), Expect = 2e-48
 Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 9/175 (5%)

Query: 1   MKLIRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLN 60
           M ++  + YFD+ I D P+GR+V  L+ +  P T ENF+ L +GE G G        Y  
Sbjct: 1   MPVVTDKVYFDITIGDEPVGRVVIGLFGNDVPKTVENFKQLASGENGFG--------YKG 52

Query: 61  IVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGS 120
            +FHRV++ FMIQ GDF+  +GTGG+SIYG  F+DEN +        +SMAN G ++NGS
Sbjct: 53  SIFHRVIRNFMIQGGDFTNFDGTGGKSIYGTRFDDENLK-IKHFVGAVSMANAGPNSNGS 111

Query: 121 QFFITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNEL 175
           QFF+TT P P LDG HVVFG VV G +VV  +EN       +P + V++  C  L
Sbjct: 112 QFFVTTAPTPWLDGRHVVFGKVVEGMDVVKKVENTKTGLNDKPKKAVKINDCGVL 166


>d2rmca_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Mouse (Mus
           musculus), variant C [TaxId: 10090]}
          Length = 182

 Score =  155 bits (393), Expect = 5e-48
 Identities = 89/175 (50%), Positives = 107/175 (61%), Gaps = 8/175 (4%)

Query: 4   IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVF 63
           +  + +FDV I D  +GRIV  L+ ++ P T ENF AL TGEKG G        Y   +F
Sbjct: 6   VTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG--------YKGSIF 57

Query: 64  HRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFF 123
           HRV+K FMIQ GDF+  +GTGG SIYG TF DENF+LKH     +SMAN G DTNGSQFF
Sbjct: 58  HRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFF 117

Query: 124 ITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNELVLK 178
           IT      LDG HVVFG V+ G  VV  IE    D   RPL D  +V   ++ +K
Sbjct: 118 ITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPLTDCTIVNSGKIDVK 172


>d2c3ba1 b.62.1.1 (A:1-171) Cyclophilin (eukaryotic) {Aspergillus
           fumigatus [TaxId: 5085]}
          Length = 171

 Score =  151 bits (382), Expect = 1e-46
 Identities = 82/178 (46%), Positives = 98/178 (55%), Gaps = 16/178 (8%)

Query: 6   PRCYFDVEISDI-----PLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLN 60
            + +FDVE + +      +GRIVF L+    P T +NFR LC    G          Y  
Sbjct: 2   SQVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGE--------GYRE 53

Query: 61  IVFHRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGS 120
             FHR++  FMIQ GDF+ GNGTGG SIYG  F DENF  KHD+  +LSMAN G +TNGS
Sbjct: 54  STFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGS 113

Query: 121 QFFITTQPAPHLDGVHVVFGHVV--SGQNVVSHIENLPVD-KMSRPLQDVRVVKCNEL 175
           QFFITT     LDG HVVFG V      +VV  IE L       R     ++V C EL
Sbjct: 114 QFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 171


>d1h0pa_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Caenorhabditis
           elegans, isoform 5 [TaxId: 6239]}
          Length = 182

 Score =  151 bits (381), Expect = 4e-46
 Identities = 85/174 (48%), Positives = 99/174 (56%), Gaps = 8/174 (4%)

Query: 4   IRPRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVF 63
           +  R YFD+EI   P+GRIV  L+    P T  NF  L    KG G        Y    F
Sbjct: 5   VTDRVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG--------YPGSKF 56

Query: 64  HRVVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFF 123
           HRV+  FMIQ GDF+ G+GTGG SIYG  F DENF+LKH     LSMAN G DTNGSQFF
Sbjct: 57  HRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFF 116

Query: 124 ITTQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNELVL 177
           ITT   P LDG HVVFG ++ G +VV  IE        RP QDV +     + +
Sbjct: 117 ITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASGHIAV 170


>d1xwna1 b.62.1.1 (A:1-166) Peptidyl-prolyl cis-trans isomerase-like
           1, PPIL1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 166

 Score =  146 bits (368), Expect = 2e-44
 Identities = 66/157 (42%), Positives = 88/157 (56%), Gaps = 13/157 (8%)

Query: 16  DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSG 75
           +  +G IV ELY    P TC+NF  L               +Y    FHR++K FMIQ G
Sbjct: 17  ETSMGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGG 65

Query: 76  DFSVGNGTGGESIYGGTFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDG 134
           D + G G GG SIYG  FEDE + +LK     +L+MAN G DTNGSQFF+T  P   LDG
Sbjct: 66  DPT-GTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDG 124

Query: 135 VHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVK 171
            H +FG V  G  +V+ +  +  +   RP+ DV+++K
Sbjct: 125 KHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161


>d1z81a1 b.62.1.1 (A:25-210) Cyclophilin (eukaryotic) {Plasmodium
           yoelii [TaxId: 5861]}
          Length = 186

 Score =  146 bits (368), Expect = 3e-44
 Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 6/173 (3%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           P  + D+ + +  LG+  FEL+ +I P T ENFR  CTGE  +       + Y N +FHR
Sbjct: 17  PVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKV---NNLPVGYKNTIFHR 73

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           V+K FMIQ GDF   NG+G  SIYG  F+DENF++KHD+  LLSMAN G +TNG QFFIT
Sbjct: 74  VIKEFMIQGGDFINHNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFIT 133

Query: 126 TQPAPHLDGVHVVFGHVVSGQ--NVVSHIENLPVD-KMSRPLQDVRVVKCNEL 175
           T+    LDG +VVFG ++      ++  IEN+ V   + +P   + VV+C EL
Sbjct: 134 TKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 186


>d2r99a1 b.62.1.1 (A:139-299) Mitochondrial peptidyl-prolyl
           cis-trans isomerase, cyclophilin F {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 161

 Score =  145 bits (365), Expect = 4e-44
 Identities = 82/169 (48%), Positives = 100/169 (59%), Gaps = 9/169 (5%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           P+ Y D++I + P GRI   L SD+ P+T ENFR LCT          K   +    FHR
Sbjct: 2   PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCT--------HEKGFGFKGSSFHR 53

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           ++  FM Q GDF+  NGTGG+SIYG  F+DENF LKH  P LLSMAN G +TNGSQFF+T
Sbjct: 54  IIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLT 113

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKCNE 174
                 LDG HVVFG V  G +V+  IE     K  +P Q V +  C E
Sbjct: 114 CDKTDWLDGKHVVFGEVTEGLDVLRQIEAQG-SKDGKPKQKVIIADCGE 161


>d1zkca1 b.62.1.1 (A:280-457) Peptidyl-prolyl cis-trans
           isomerase-like 2,  Cyclophilin-60, PPI domain {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 178

 Score =  134 bits (338), Expect = 9e-40
 Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 21/182 (11%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFS 78
            G +  EL+ D+ P TCENF  LC              +Y   +FHR ++ F+IQ GD +
Sbjct: 9   KGDLNLELHCDLTPKTCENFIRLCKKH-----------YYDGTIFHRSIRNFVIQGGDPT 57

Query: 79  VGNGTGGESIYGGTFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHV 137
            G GTGGES +G  F+DE    L H    +LSMAN G ++N SQFFIT +   +LD  H 
Sbjct: 58  -GTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHT 116

Query: 138 VFGHVVSGQNVVSHIENLPVDKMS-RPLQDVRVVKC-------NELVLKSKLKAKEKRKA 189
           +FG VV G +V++ +EN+  D  + RP +++R+           E   +   + K + K 
Sbjct: 117 IFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKV 176

Query: 190 SP 191
           +P
Sbjct: 177 AP 178


>d2ok3a1 b.62.1.1 (A:1-159) Cyclophilin-like protein PPIL3B {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 159

 Score =  130 bits (327), Expect = 2e-38
 Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 14/156 (8%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFS 78
           +G I  E++ +  P TCENF ALC            + +Y   +FHR +KGFM+Q+GD +
Sbjct: 9   VGDIKIEVFCERTPKTCENFLALC-----------ASNYYNGCIFHRNIKGFMVQTGDPT 57

Query: 79  VGNGTGGESIYGGTFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHV 137
              G GG SI+G  FEDE +  LKH+   ++SMAN G +TNGSQFFIT    PHLD  + 
Sbjct: 58  G-TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 116

Query: 138 VFGHVVSGQNVVSHIENLPVD-KMSRPLQDVRVVKC 172
           VFG V+ G   +  +E LPV+ K  RPL DV +   
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDI 152


>d1w74a_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 171

 Score =  130 bits (328), Expect = 2e-38
 Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 9/160 (5%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKN----LHYLNIVFHRVVKGFMIQS 74
            G I   L+ +  P T  NF  L  G K               Y   VFHRV++GFMIQ 
Sbjct: 12  RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQ- 70

Query: 75  GDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDG 134
           G    G G GG        ++ + EL+ D+P+LL+MAN G  TNGSQFFIT    PHL+ 
Sbjct: 71  GGDPTGTGRGGPGYK--FADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNR 128

Query: 135 VHVVFGHVVS--GQNVVSHIENLPVDKMSRPLQDVRVVKC 172
            H +FG V+    Q VV  I     D   RP   V +   
Sbjct: 129 RHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESI 168


>d2fu0a1 b.62.1.1 (A:5-159) Putative cyclophilin PFE0505w
           {Plasmodium falciparum [TaxId: 5833]}
          Length = 155

 Score =  115 bits (289), Expect = 8e-33
 Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 13/155 (8%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFS 78
           +G I   L+   C  T +NF                  +Y N +FHRV+K FM+Q+GD S
Sbjct: 10  MGDIHISLFYKECKKTVQNFSVHSING-----------YYNNCIFHRVIKHFMVQTGDPS 58

Query: 79  VGNGTGGESIYGGTFEDENFE-LKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHV 137
            G+GTGGESI+G  FEDE F+ L H +PF++SMAN G +TNGSQFFITT P P LD  H 
Sbjct: 59  -GDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHT 117

Query: 138 VFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKC 172
           VFG V  G  +V  IE +  DK  +PL+D++++  
Sbjct: 118 VFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNI 152


>d2a2na1 b.62.1.1 (A:483-646) Peptidylprolyl isomerase domain and WD
           repeat-containing protein 1, PPWD1, C-terminal domain
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 164

 Score =  113 bits (282), Expect = 1e-31
 Identities = 65/168 (38%), Positives = 87/168 (51%), Gaps = 12/168 (7%)

Query: 6   PRCYFDVEISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHR 65
           P+   D  I    +G I  +L+   CP T ENF               +N +Y    FHR
Sbjct: 5   PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHS-----------RNGYYNGHTFHR 53

Query: 66  VVKGFMIQSGDFSVGNGTGGESIYGGTFEDENFELKHDEPFLLSMANRGKDTNGSQFFIT 125
           ++KGFMIQ+GD +     G     G   ++ +  L+HD P+ LSMAN G +TNGSQFFIT
Sbjct: 54  IIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFIT 113

Query: 126 TQPAPHLDGVHVVFGHVVSGQNVVSHIENLPVD-KMSRPLQDVRVVKC 172
             P P LD  H VFG V  G  VV  I N+ V+ K  +P +DV ++  
Sbjct: 114 VVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINI 161


>d2b71a1 b.62.1.1 (A:23-191) Cyclophilin-like protein PY00693
           {Plasmodium yoelii [TaxId: 5861]}
          Length = 169

 Score =  110 bits (276), Expect = 1e-30
 Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 13/155 (8%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFS 78
           LG    ELY    P TC NF  LC               + +      V    +  G   
Sbjct: 25  LGDFEVELYWYHSPKTCLNFYTLCEM------------GFYDNTIFHRVIPNFVIQGGDP 72

Query: 79  VGNGTGGESIYGGTFEDE-NFELKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLDGVHV 137
            G G GG+SIYG  FEDE N ELKH    +LSM+N G +TN SQFFIT  P PHLDG H 
Sbjct: 73  TGTGKGGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHT 132

Query: 138 VFGHVVSGQNVVSHIENLPVDKMSRPLQDVRVVKC 172
           +F  V      + +I ++     ++P+ D+++++ 
Sbjct: 133 IFARVSKNMTCIENIASVQTTATNKPIFDLKILRT 167


>d1lopa_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
           {Escherichia coli [TaxId: 562]}
          Length = 164

 Score = 98.0 bits (243), Expect = 7e-26
 Identities = 41/167 (24%), Positives = 60/167 (35%), Gaps = 27/167 (16%)

Query: 19  LGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGDFS 78
            G IV + + D  P T +NF   C           +   Y N +FHRV+ GFMIQ G F 
Sbjct: 8   HGDIVIKTFDDKAPETVKNFLDYC-----------REGFYNNTIFHRVINGFMIQGGGFE 56

Query: 79  VGNGTGGESIYGGTFEDENFELKHDEPFLLSMANR-GKDTNGSQFFITTQP--------A 129
            G             ++E      +    L+MA      +  +QFFI             
Sbjct: 57  PGMKQK---ATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGE 113

Query: 130 PHLDGVHVVFGHVVSGQNVVSHIENLPVDKMS----RPLQDVRVVKC 172
                 + VF  VV G + V  I+ +   +       P +DV +   
Sbjct: 114 SLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIESV 160


>d1v9ta_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
           {Escherichia coli [TaxId: 562]}
          Length = 166

 Score = 92.3 bits (228), Expect = 1e-23
 Identities = 43/170 (25%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 16  DIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSG 75
               G I  EL     P++ +NF                   Y N  FHRV+ GFMIQ G
Sbjct: 10  TTSAGNIELELDKQKAPVSVQNFVDYVNSG-----------FYNNTTFHRVIPGFMIQGG 58

Query: 76  DFSVGNGTGGESIYGGTFEDENFE-LKHDEPFLLSMANRGKDTNGSQFFITTQPAPHLD- 133
            F        +       ++E    L++    +       KD+  SQFFI       LD 
Sbjct: 59  GF---TEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDH 115

Query: 134 ----GVHVVFGHVVSGQNVVSHIENLPVDKMS----RPLQDVRVVKCNEL 175
                 + VFG VV G +V   I  +P   +      P + V ++    L
Sbjct: 116 GQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVL 165


>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 138

 Score = 31.8 bits (72), Expect = 0.040
 Identities = 10/89 (11%), Positives = 30/89 (33%)

Query: 183 AKEKRKASPTSASSDESDKEEEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEE 242
              +  AS         ++ +++ E  E+    +EA+  K   + ++ +++  +   EE 
Sbjct: 28  GVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEEN 87

Query: 243 KEEGEQTDSEKEAKKRKKHKKDKKKRKKK 271
               +    +   K     +  +      
Sbjct: 88  NNFIKMAKEKLAQKMESNKENREAHLAAM 116



 Score = 29.9 bits (67), Expect = 0.18
 Identities = 10/71 (14%), Positives = 28/71 (39%)

Query: 200 DKEEEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKKRK 259
             +E E  +      E E +  +K  ++     K +K +  ++ E  ++      A   +
Sbjct: 59  KYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLE 118

Query: 260 KHKKDKKKRKK 270
           + ++  K  ++
Sbjct: 119 RLQEKDKHAEE 129



 Score = 25.2 bits (55), Expect = 6.6
 Identities = 6/67 (8%), Positives = 26/67 (38%)

Query: 177 LKSKLKAKEKRKASPTSASSDESDKEEEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSK 236
            +   +   ++     +     + ++  +K E  + + E       +  ++K K  ++ +
Sbjct: 72  KREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVR 131

Query: 237 YEEEEEK 243
             +E ++
Sbjct: 132 KNKELKE 138


>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
           protein 1 (GBP1), C-terminal domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 300

 Score = 30.1 bits (67), Expect = 0.23
 Identities = 12/89 (13%), Positives = 36/89 (40%)

Query: 171 KCNELVLKSKLKAKEKRKASPTSASSDESDKEEEEKEEGEQTDSEKEAKKRKKHKKDKKK 230
              E    S     E ++ +       E   +E  K+  E+ ++++    +++ +    K
Sbjct: 211 VKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALK 270

Query: 231 KKKKSKYEEEEEKEEGEQTDSEKEAKKRK 259
            +++ +  +E  ++E     +E +  + K
Sbjct: 271 LQEQEQLLKEGFQKESRIMKNEIQDLQTK 299



 Score = 29.7 bits (66), Expect = 0.31
 Identities = 12/74 (16%), Positives = 31/74 (41%)

Query: 198 ESDKEEEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKK 257
            +    E + + EQ   +KE   ++  K+  +K +       +E++        E+E   
Sbjct: 219 SAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLL 278

Query: 258 RKKHKKDKKKRKKK 271
           ++  +K+ +  K +
Sbjct: 279 KEGFQKESRIMKNE 292



 Score = 28.9 bits (64), Expect = 0.52
 Identities = 19/107 (17%), Positives = 45/107 (42%)

Query: 165 QDVRVVKCNELVLKSKLKAKEKRKASPTSASSDESDKEEEEKEEGEQTDSEKEAKKRKKH 224
           ++ R     E +L++ LK+KE    +        ++KE+E + E  + +S + + K    
Sbjct: 166 EEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHE 225

Query: 225 KKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKKRKKK 271
            + K ++  + K    +E  +      E +  +  K ++     K +
Sbjct: 226 MQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQ 272


>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
           chain {Azotobacter vinelandii [TaxId: 354]}
          Length = 477

 Score = 28.1 bits (62), Expect = 1.2
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 201 KEEEEK--EEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYE 238
           +EE E   +E  +   EK  K R KH         +SK  
Sbjct: 3   REEVESLIQEVLEVYPEKARKDRNKHLAVNDPAVTQSKKC 42



 Score = 28.1 bits (62), Expect = 1.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 235 SKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKKRKKKS 272
           S+ E E   +E  +   EK  K R KH         +S
Sbjct: 2   SREEVESLIQEVLEVYPEKARKDRNKHLAVNDPAVTQS 39


>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
           N-terminal DNA-binding fragment {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 230

 Score = 27.8 bits (62), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 222 KKHKKDKKKKKKKSKYEEEEEKEEGEQTDSE 252
           +  K   + +K+ SK E+ + KEE E+   E
Sbjct: 107 QYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137



 Score = 25.8 bits (57), Expect = 5.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 215 EKEAKKRKKHKKDKKKKKKKSKYEEEEE 242
           + + + RK+  K++K K K+   +  +E
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137


>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
           DNA-binding fragment {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 223

 Score = 27.8 bits (62), Expect = 1.4
 Identities = 6/29 (20%), Positives = 18/29 (62%)

Query: 224 HKKDKKKKKKKSKYEEEEEKEEGEQTDSE 252
            +  K++KK+ +  E+++ + E E+ + +
Sbjct: 101 FQLQKEQKKQLTSQEKKQIRLEREKFEED 129



 Score = 25.8 bits (57), Expect = 5.6
 Identities = 5/28 (17%), Positives = 17/28 (60%)

Query: 215 EKEAKKRKKHKKDKKKKKKKSKYEEEEE 242
           + + +++K+    +KK+ +  + + EE+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129


>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast
           (Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
          Length = 334

 Score = 27.8 bits (61), Expect = 1.4
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 203 EEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEEKEE 245
            EE         EK +K  + HK   K  +      +E EKEE
Sbjct: 9   REENRVKSDMLKEKLSKDAENHKAYLKSHQVHRHKLKEMEKEE 51


>d1qnta1 a.4.2.1 (A:92-176) O6-alkylguanine-DNA alkyltransferase
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 85

 Score = 26.0 bits (57), Expect = 1.5
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 13/76 (17%)

Query: 13 EISDIPLGRIVFELYSDICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMI 72
           +  +  G ++   Y  +               + +G     N   + I  HRVV     
Sbjct: 11 LLKVVKFGEVI--SYQQL-----AALAGNPKAARAVGGAMRGNPVPILIPCHRVVC---- 59

Query: 73 QSGDFSVGNGTGGESI 88
               +VGN +GG ++
Sbjct: 60 --SSGAVGNYSGGLAV 73


>d1vqob1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Archaeon
           Haloarcula marismortui [TaxId: 2238]}
          Length = 337

 Score = 26.9 bits (59), Expect = 2.9
 Identities = 7/61 (11%), Positives = 14/61 (22%)

Query: 208 EGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKK 267
           E    +   E  +     +D      + +  +  E  +                   KKK
Sbjct: 99  EVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKK 158

Query: 268 R 268
            
Sbjct: 159 P 159


>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
           subunit) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 473

 Score = 26.5 bits (58), Expect = 3.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 193 SASSDESDKEEEEKEEGEQTDSEKEAKKRK 222
           +  SD+    EE+  +G    + KE  + K
Sbjct: 357 NICSDDELGSEEDGFDGATAAARKEVIRNK 386


>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
           PAC) {Streptococcus mutans [TaxId: 1309]}
          Length = 377

 Score = 26.5 bits (58), Expect = 4.0
 Identities = 8/34 (23%), Positives = 16/34 (47%)

Query: 231 KKKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKD 264
           +K  + Y  + +  E EQ   +    + +KHK +
Sbjct: 1   QKDLADYPVKLKAYEDEQASIKAALAELEKHKNE 34


>d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis
           [TaxId: 1423]}
          Length = 182

 Score = 25.8 bits (56), Expect = 4.2
 Identities = 5/47 (10%), Positives = 16/47 (34%)

Query: 30  ICPITCENFRALCTGEKGIGKTTGKNLHYLNIVFHRVVKGFMIQSGD 76
            C    E  ++    +  +     ++   +  +   V +   + +GD
Sbjct: 128 PCIQPGEVIQSYYPDQPKLASAFVRHALGIRGIVCIVERPGAVYTGD 174


>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
           gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 248

 Score = 26.3 bits (57), Expect = 4.3
 Identities = 10/100 (10%), Positives = 29/100 (29%), Gaps = 4/100 (4%)

Query: 176 VLKSKLKAKEKRKASPTSASSDESDKEEEEKEEGEQTDSEKEAKKRKK----HKKDKKKK 231
           +LK  +  +  +         +    +     +G    S   A    K      +D  + 
Sbjct: 149 ILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDDSEL 208

Query: 232 KKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKKRKKK 271
                   +    E +  D     K  ++  + + + +++
Sbjct: 209 LSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRR 248


>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 288

 Score = 25.9 bits (56), Expect = 5.1
 Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 201 KEEEEKEEGEQTDSEKEAKKRKKHKKDKKKK--KKKSKYEEEEEKEEGEQTDSEKEAKKR 258
               ++ + E+  +  + +K ++H +   K+    K ++E + ++ +  Q   EK     
Sbjct: 103 ARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADI 162

Query: 259 KKHKKDKKKRKKK 271
              K D +K +++
Sbjct: 163 NVTKADVEKARQQ 175


>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 86

 Score = 24.1 bits (52), Expect = 8.5
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 232 KKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKKRKKK 271
           ++++KY E   KE             R  + K KK++++K
Sbjct: 47  EEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86


>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 149

 Score = 24.8 bits (54), Expect = 8.8
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 222 KKHKKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKKRKKHKKDKKKRKKK 271
               + ++    K  Y+EEE  E G    SE   K R++ ++ K     K
Sbjct: 38  WNQARLERDLSNKKIYQEEEMPESGA--GSEFNRKLREEARRKKYGIVLK 85


>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 1449

 Score = 25.6 bits (55), Expect = 9.0
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 203 EEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKKSKYEEEEEKEEGEQTDSEKEAKKRKKHK 262
           +E  E   Q  + K++KKR        K K   + +   E +  +          +   +
Sbjct: 115 DEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGNTQPTIR 174

Query: 263 KDKKK 267
           KD  K
Sbjct: 175 KDGLK 179


>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
           chain {Clostridium pasteurianum [TaxId: 1501]}
          Length = 525

 Score = 25.5 bits (55), Expect = 9.6
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 203 EEEKEEGEQTDSEKEAKKRKKHKKDKKKKKKK 234
           E  K+E  +    K  K R  H   K ++   
Sbjct: 2   ENLKDEILEKYIPKTKKTRSGHIVIKTEETPN 33


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.131    0.365 

Gapped
Lambda     K      H
   0.267   0.0634    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 975,708
Number of extensions: 47085
Number of successful extensions: 511
Number of sequences better than 10.0: 1
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 128
Length of query: 272
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 188
Effective length of database: 1,254,276
Effective search space: 235803888
Effective search space used: 235803888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 52 (24.0 bits)