Your job contains 1 sequence.
>psy17828
MSDAWEEIQAIKSKRNSLREKLQKRKQERKDILERDGSLSPARNEEDSVDTSYQTEEDAI
KLNPDLELELLEKLCDVSLTEEDAIKLNPDLELELLEKLCDVSLVLPITSQSLMGTLNQE
YTHLCLINLLHKFATQKLITINESKDDDNQVEIVSVEHVKLLGMVNEVSKGIKRKADTDT
SDYEDDEDLKKFKDNGDETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERF
RSQSGNQVQEYCSHGTRAECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMD
SCKYVHYEVDGAKIKGISDISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMA
DPPWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQDEGL
LFLWVTGRAMELGRECLKLSLNCQLSQDVEFTWPYLGWMSKFSLHHFFQVVYLAAMIRSI
IALHNLINNKITNRDAEVNIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEK
KEITKSKVEDKPQEDKKPEIKVNISSSAQASSMPASTSRITFLGYMDMAGETYGRYTHYV
PALIMSVICNTRRVMFISHSGLVEVSKMVGQEVVTSKVVVHPLVLLSVVDHFNRMSKIGN
QKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREK
VVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEDKIRPER
EPNPRPSANKAAIGKWKTNTTPNKAFLCGRSSRGGKVGRIRCRSHFSTTGVLSIRRIFNP
IGTWTFIRIPTTTWPSRAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPK
ELGLPTEAYRVVDEVHDDGSPTTKTFDHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQ
RVTNQLMGLKGLNQQIKEIEKYVGQVSRYWPPFYVVVINLIDKRSVTHLSGPGRWLLPWG
WSIMMWVLVGWGVLGIGWNSAHESSDHLQSTRHLQHVARHY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17828
(1061 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039139 - symbol:Ime4 "Inducer of meiosis 4" speci... 611 2.0e-82 2
ZFIN|ZDB-GENE-030131-9498 - symbol:mettl3 "methyltransfer... 738 2.5e-81 2
UNIPROTKB|F1MX80 - symbol:METTL3 "Uncharacterized protein... 736 1.4e-80 2
UNIPROTKB|F1S8J8 - symbol:METTL3 "Uncharacterized protein... 736 2.2e-80 2
UNIPROTKB|Q86U44 - symbol:METTL3 "N6-adenosine-methyltran... 736 5.8e-80 2
UNIPROTKB|E2R943 - symbol:METTL3 "Uncharacterized protein... 736 7.4e-80 2
RGD|1311750 - symbol:Mettl3 "methyltransferase-like 3" sp... 729 7.4e-80 2
MGI|MGI:1927165 - symbol:Mettl3 "methyltransferase like 3... 729 1.2e-79 2
TAIR|locus:2132731 - symbol:MTA "mRNAadenosine methylase"... 642 2.0e-62 1
FB|FBgn0002787 - symbol:Rpn8 "Regulatory particle non-ATP... 623 2.6e-60 1
UNIPROTKB|Q3ZBD0 - symbol:PSMD7 "26S proteasome non-ATPas... 568 2.8e-54 1
MGI|MGI:1351511 - symbol:Psmd7 "proteasome (prosome, macr... 568 2.8e-54 1
RGD|1306902 - symbol:Psmd7 "proteasome (prosome, macropai... 568 2.8e-54 1
UNIPROTKB|P51665 - symbol:PSMD7 "26S proteasome non-ATPas... 568 2.8e-54 1
ZFIN|ZDB-GENE-030131-5541 - symbol:psmd7 "proteasome (pro... 561 1.6e-53 1
GENEDB_PFALCIPARUM|PF07_0123 - symbol:PF07_0123 "mRNA (N6... 515 9.7e-47 1
WB|WBGene00004464 - symbol:rpn-8 species:6239 "Caenorhabd... 477 2.0e-44 1
UNIPROTKB|O61792 - symbol:rpn-8 "Protein RPN-8" species:6... 477 2.0e-44 1
UNIPROTKB|B4DXI8 - symbol:PSMD7 "26S proteasome non-ATPas... 477 2.0e-44 1
UNIPROTKB|H0YFV6 - symbol:METTL3 "N6-adenosine-methyltran... 385 2.1e-39 2
ASPGD|ASPL0000029143 - symbol:AN5121 species:162425 "Emer... 423 1.3e-38 1
TAIR|locus:2166449 - symbol:RPN8A "AT5G05780" species:370... 419 3.5e-38 1
UNIPROTKB|G4NCJ9 - symbol:MGG_01059 "26S proteasome regul... 419 3.5e-38 1
TAIR|locus:2074653 - symbol:MEE34 "AT3G11270" species:370... 415 9.5e-38 1
POMBASE|SPCC1682.10 - symbol:rpn8 "19S proteasome regulat... 400 3.9e-36 1
DICTYBASE|DDB_G0279633 - symbol:psmD7 "26S proteasome non... 398 6.3e-36 1
CGD|CAL0002371 - symbol:RPN8 species:5476 "Candida albica... 386 1.2e-34 1
UNIPROTKB|Q59YL2 - symbol:RPN8 "Likely 26S proteasome reg... 386 1.2e-34 1
SGD|S000005787 - symbol:RPN8 "non-ATPase regulatory subun... 351 7.0e-31 1
CGD|CAL0004692 - symbol:orf19.1476 species:5476 "Candida ... 364 1.5e-30 2
UNIPROTKB|Q5ALV0 - symbol:IME4 "Putative uncharacterized ... 364 1.5e-30 2
SGD|S000003160 - symbol:IME4 "Probable mRNA N6-adenosine ... 285 2.4e-20 2
FB|FBgn0037270 - symbol:CG9769 species:7227 "Drosophila m... 157 2.6e-08 1
UNIPROTKB|E1C050 - symbol:EIF3F "Uncharacterized protein"... 159 2.7e-08 1
UNIPROTKB|O00303 - symbol:EIF3F "Eukaryotic translation i... 157 5.5e-08 1
UNIPROTKB|A5A6I3 - symbol:EIF3F "Eukaryotic translation i... 157 5.7e-08 1
UNIPROTKB|Q4R5B8 - symbol:EIF3F "Eukaryotic translation i... 157 5.7e-08 1
UNIPROTKB|B3KSH1 - symbol:EIF3F "HCG1784554, isoform CRA_... 157 6.1e-08 1
UNIPROTKB|E1BLZ8 - symbol:EIF3F "Uncharacterized protein"... 157 6.6e-08 1
TAIR|locus:2061206 - symbol:EIF2 "AT2G39990" species:3702... 154 6.8e-08 1
MGI|MGI:1913335 - symbol:Eif3f "eukaryotic translation in... 155 9.4e-08 1
DICTYBASE|DDB_G0293254 - symbol:eif3F "eukaryotic transla... 141 1.8e-06 1
POMBASE|SPBC4C3.07 - symbol:SPBC4C3.07 "translation initi... 134 1.3e-05 1
DICTYBASE|DDB_G0293180 - symbol:csn6 "Mov34/MPN/PAD-1 fam... 135 5.1e-05 2
ZFIN|ZDB-GENE-050417-289 - symbol:cops6 "COP9 constitutiv... 128 5.9e-05 1
FB|FBgn0033069 - symbol:CG8335 species:7227 "Drosophila m... 124 0.00015 1
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula... 123 0.00023 1
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species... 119 0.00064 1
UNIPROTKB|A7TX81 - symbol:COPS6 "COP9 signalosome complex... 119 0.00070 1
UNIPROTKB|F1MG10 - symbol:COPS6 "COP9 signalosome complex... 119 0.00071 1
MGI|MGI:1349439 - symbol:Cops6 "COP9 (constitutive photom... 119 0.00071 1
RGD|1309919 - symbol:Cops6 "COP9 signalosome subunit 6" s... 119 0.00080 1
UNIPROTKB|E7EM64 - symbol:COPS6 "COP9 signalosome complex... 118 0.00093 1
UNIPROTKB|Q7L5N1 - symbol:COPS6 "COP9 signalosome complex... 118 0.00093 1
>FB|FBgn0039139 [details] [associations]
symbol:Ime4 "Inducer of meiosis 4" species:7227 "Drosophila
melanogaster" [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=ISS] [GO:0001510 "RNA methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0060968 "regulation of
gene silencing" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0008593 "regulation
of Notch signaling pathway" evidence=IMP] InterPro:IPR007757
InterPro:IPR025848 Pfam:PF05063 PROSITE:PS51143 EMBL:AE014297
GO:GO:0005634 GO:GO:0003723 GO:GO:0030708 GO:GO:0060968
GO:GO:0008593 eggNOG:COG4725 GeneTree:ENSGT00550000075058
GO:GO:0016422 EMBL:AY113286 RefSeq:NP_651204.1 UniGene:Dm.13317
ProteinModelPortal:Q9VCE6 DIP:DIP-17384N IntAct:Q9VCE6
MINT:MINT-308015 STRING:Q9VCE6 PaxDb:Q9VCE6 PRIDE:Q9VCE6
EnsemblMetazoa:FBtr0084532 GeneID:42844 KEGG:dme:Dmel_CG5933
CTD:42844 FlyBase:FBgn0039139 InParanoid:Q9VCE6 KO:K05925
OMA:CDLRFLD OrthoDB:EOG4J9KF1 PhylomeDB:Q9VCE6 GenomeRNAi:42844
NextBio:830874 Bgee:Q9VCE6 GermOnline:CG5933 Uniprot:Q9VCE6
Length = 608
Score = 611 (220.1 bits), Expect = 2.0e-82, Sum P(2) = 2.0e-82
Identities = 115/166 (69%), Positives = 133/166 (80%)
Query: 265 DTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDGAKIKGISDISDEG 324
+T + CTKLHF+KIIQ HTDESLGDCSFLNTCFHM +CKYVHYEVD + +D
Sbjct: 312 ETTDKCTKLHFKKIIQAHTDESLGDCSFLNTCFHMATCKYVHYEVDTLPHINTNKPTDVK 371
Query: 325 NKSLLEKT-----KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPYGTMSDDE 379
K L+++ LYPPQWIQCDLR+LDMTVLGKFAV+MADPPWDIHMELPYGTMSDDE
Sbjct: 372 TKLSLKRSVDSSCTLYPPQWIQCDLRFLDMTVLGKFAVVMADPPWDIHMELPYGTMSDDE 431
Query: 380 MRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQDEGLLFLWV 425
MR LG+P LQD+GL+FLWVTGRAMELGR+CLKL+ + L +WV
Sbjct: 432 MRALGVPALQDDGLIFLWVTGRAMELGRDCLKLWGYERVDEL-IWV 476
Score = 246 (91.7 bits), Expect = 2.0e-82, Sum P(2) = 2.0e-82
Identities = 71/187 (37%), Positives = 99/187 (52%)
Query: 103 SLVLPITSQSLMGTLNQEYTHLCLINLLHKFATQKLITI-NESKDDDNQVEIVSVEHVKL 161
SL LPI S ++ + + +L K A Q I I N + + EI+SV+ +L
Sbjct: 65 SLALPIVSTQVVEKIAGSSLEMVNF-ILGKLANQGAIVIRNVTIGTEAGCEIISVQPKEL 123
Query: 162 LGMVNEVS-------KGIKRKAXXXXXXXXXXXXLK-------KFKDNGDETD-VMSLLS 206
++ + + + KRK +K K + D D +M LLS
Sbjct: 124 KEILEDTNDTCQQKEEEAKRKLEVDDVDQPQEKTIKLESTVARKESTSLDAPDDIMMLLS 183
Query: 207 KPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTRAECLRMKD- 265
PS REKQ KQ+GEEIL+LLTKPTAKERS+AE+F+S G QV E+CSHGT+ ECL+ +
Sbjct: 184 MPSTREKQSKQVGEEILELLTKPTAKERSVAEKFKSHGGAQVMEFCSHGTKVECLKAQQA 243
Query: 266 TPNICTK 272
T + K
Sbjct: 244 TAEMAAK 250
Score = 123 (48.4 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 22/25 (88%), Positives = 25/25 (100%)
Query: 415 LQDEGLLFLWVTGRAMELGRECLKL 439
LQD+GL+FLWVTGRAMELGR+CLKL
Sbjct: 440 LQDDGLIFLWVTGRAMELGRDCLKL 464
Score = 39 (18.8 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 46 EDSVDTSYQTEEDAI-KLNPD 65
ED+ DT Q EE+A KL D
Sbjct: 128 EDTNDTCQQKEEEAKRKLEVD 148
>ZFIN|ZDB-GENE-030131-9498 [details] [associations]
symbol:mettl3 "methyltransferase like 3"
species:7955 "Danio rerio" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001510 "RNA
methylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR007757 InterPro:IPR025848 Pfam:PF05063 PROSITE:PS51143
PROSITE:PS51563 ZFIN:ZDB-GENE-030131-9498 GO:GO:0005634
GO:GO:0016422 KO:K05925 CTD:56339 HOVERGEN:HBG052521 EMBL:BC067182
IPI:IPI00499304 RefSeq:NP_997945.1 UniGene:Dr.77098 PRIDE:Q6NX96
GeneID:100004398 KEGG:dre:100004398 InParanoid:Q6NX96
NextBio:20786230 ArrayExpress:Q6NX96 Bgee:Q6NX96 Uniprot:Q6NX96
Length = 584
Score = 738 (264.8 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 138/225 (61%), Positives = 175/225 (77%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLLS+ S +E+Q K++ +EIL+LL +AKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 227 DMEIESLLSQQSTKEQQSKKVSQEILELLNTSSAKEQSIVEKFRSRGRAQVQEFCDYGTK 286
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDGA-KIKG 316
EC++ DTP CTKLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D + +G
Sbjct: 287 EECVQSGDTPQPCTKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDSPPEAEG 346
Query: 317 ISDISDEGNKSL-LEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHM 368
+ G L L T KL+P QWI CD+RYLD+++LGKFAV+MADPPWDIHM
Sbjct: 347 DALGPQAGAAELGLHSTVGDSNVGKLFPSQWICCDIRYLDVSILGKFAVVMADPPWDIHM 406
Query: 369 ELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLF 413
ELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+
Sbjct: 407 ELPYGTLTDDEMRKLNIPILQDDGFLFLWVTGRAMELGRECLSLW 451
Score = 122 (48.0 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 421 LNIPILQDDGFLFLWVTGRAMELGRECLSL 450
Score = 97 (39.2 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 101 DVSLVLPITSQSLMGTLNQE---YTHLCLINLLHKFATQKLITINESK--DDDNQVEIVS 155
++SL LP S ++ LN +H C+ +LL KF+ Q+LI + + + + S
Sbjct: 79 ELSLSLPTDSLTITNQLNTSESPVSHSCIQSLLLKFSAQELIEVRQPSITSSSSSTLVTS 138
Query: 156 VEHVKLLGMVNEVSKG----IKRKA 176
V+H KL M+ + +KRKA
Sbjct: 139 VDHTKLWAMIGSAGQSQRTAVKRKA 163
Score = 47 (21.6 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 25/120 (20%), Positives = 43/120 (35%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDA- 59
MSD W IQA K + +S + GS+ DS + Q+
Sbjct: 1 MSDTWSHIQAHKKQLDSLRERLQRRRKDPTQLGTEVGSVESGSARSDSPGPAIQSPPQVE 60
Query: 60 IKLNPD--XXXXXXXXXCDVSLT-EEDAIKLNPDXXXXXX--XXXCDVSLVLPITSQSLM 114
++ PD ++SL+ D++ + C SL+L ++Q L+
Sbjct: 61 VEHPPDPELEKRLLGYLSELSLSLPTDSLTITNQLNTSESPVSHSCIQSLLLKFSAQELI 120
>UNIPROTKB|F1MX80 [details] [associations]
symbol:METTL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007757 InterPro:IPR025848 Pfam:PF05063 PROSITE:PS51143
PROSITE:PS51563 GO:GO:0005634 GeneTree:ENSGT00550000075058
GO:GO:0016422 OMA:TKKSRKH EMBL:DAAA02028311 IPI:IPI00866999
UniGene:Bt.13303 PRIDE:F1MX80 Ensembl:ENSBTAT00000020151
Uniprot:F1MX80
Length = 580
Score = 736 (264.1 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 137/240 (57%), Positives = 179/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 222 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 281
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 282 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEA 341
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G D + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 342 PGSKDHTPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 401
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 402 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 458
Score = 122 (48.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 417 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 446
Score = 92 (37.4 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 41/175 (23%), Positives = 71/175 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S ++D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLQRRR-------KQDSGHLDLRNPEAALSPTFRSDSPV- 52
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S E + +P+ D+SL LP + S+ + T
Sbjct: 53 ---PAAPTSGGPKPSTASAVPE--LATDPELEKKLLHHLSDLSLTLPTDAVSIRLAISTP 107
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVSK 170
+ T + +LL KFA Q+LI + S +DD + + +H KL M+ V++
Sbjct: 108 DAPATQDGVESLLQKFAAQELIEVKRSLLQDDAHPTLVTYADHSKLSAMMGAVAE 162
>UNIPROTKB|F1S8J8 [details] [associations]
symbol:METTL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007757 InterPro:IPR025848 Pfam:PF05063 PROSITE:PS51143
PROSITE:PS51563 GO:GO:0005634 GeneTree:ENSGT00550000075058
GO:GO:0016422 OMA:TKKSRKH EMBL:CU695044 Ensembl:ENSSSCT00000026886
Uniprot:F1S8J8
Length = 582
Score = 736 (264.1 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 137/240 (57%), Positives = 179/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 224 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 283
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 284 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEA 343
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G D + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 344 PGSKDHTPSQELALTQSVGGDSNADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 403
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 404 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 460
Score = 122 (48.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 419 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 448
Score = 90 (36.7 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 41/175 (23%), Positives = 70/175 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S L D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLRRRRKQDSGHLVLD-----LRNPEAALSPTFRSDSPV- 54
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S E + +P+ D++L LP + S+ + T
Sbjct: 55 ---PTVPTSGGPKPSTASAVPE--LATDPELEKKLLHHLSDLALTLPTDAVSIRLAISTP 109
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVSK 170
+ T + +LL KFA Q+LI + S +DD + + +H KL M+ V++
Sbjct: 110 DAPATQDGVESLLQKFAAQELIEVKRSLLQDDAHPTLVTYADHSKLSAMMGAVAE 164
>UNIPROTKB|Q86U44 [details] [associations]
symbol:METTL3 "N6-adenosine-methyltransferase 70 kDa
subunit" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016422
"mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IMP] [GO:0001510 "RNA methylation" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR007757 InterPro:IPR025848
Pfam:PF05063 PROSITE:PS51143 EMBL:AF014837 GO:GO:0010467
GO:GO:0005654 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0003723
eggNOG:COG4725 GO:GO:0016422 KO:K05925 EMBL:AF283991 EMBL:AE000658
EMBL:BX247964 EMBL:BC003031 EMBL:BC001650 EMBL:BC052244
IPI:IPI00009755 IPI:IPI00328636 RefSeq:NP_062826.2
UniGene:Hs.168799 ProteinModelPortal:Q86U44 STRING:Q86U44
PhosphoSite:Q86U44 DMDM:33301371 PaxDb:Q86U44 PeptideAtlas:Q86U44
PRIDE:Q86U44 DNASU:56339 Ensembl:ENST00000298717 GeneID:56339
KEGG:hsa:56339 UCSC:uc001wbb.3 CTD:56339 GeneCards:GC14M021966
HGNC:HGNC:17563 HPA:HPA001299 MIM:612472 neXtProt:NX_Q86U44
PharmGKB:PA134955499 HOGENOM:HOG000012669 HOVERGEN:HBG052521
InParanoid:Q86U44 OMA:TKKSRKH OrthoDB:EOG4JQ3XC PhylomeDB:Q86U44
GenomeRNAi:56339 NextBio:61981 ArrayExpress:Q86U44 Bgee:Q86U44
CleanEx:HS_METTL3 Genevestigator:Q86U44 GermOnline:ENSG00000165819
Uniprot:Q86U44
Length = 580
Score = 736 (264.1 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 137/240 (57%), Positives = 179/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 222 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 281
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 282 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEA 341
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G D + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 342 PGSKDHTPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 401
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 402 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 458
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 417 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 446
Score = 86 (35.3 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 39/175 (22%), Positives = 70/175 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S ++D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLQRRR-------KQDSGHLDLRNPEAALSPTFRSDSPV- 52
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S E + +P+ D++L LP + S+ + T
Sbjct: 53 ---PTAPTSGGPKPSTASAVPE--LATDPELEKKLLHHLSDLALTLPTDAVSICLAISTP 107
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVSK 170
+ T + +LL KFA Q+LI + +DD + + +H KL M+ V++
Sbjct: 108 DAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAE 162
>UNIPROTKB|E2R943 [details] [associations]
symbol:METTL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007757 InterPro:IPR025848 Pfam:PF05063 PROSITE:PS51143
PROSITE:PS51563 GO:GO:0005634 GeneTree:ENSGT00550000075058
GO:GO:0016422 KO:K05925 CTD:56339 OMA:TKKSRKH EMBL:AAEX03009855
RefSeq:XP_532627.2 Ensembl:ENSCAFT00000009106 GeneID:475404
KEGG:cfa:475404 NextBio:20851250 Uniprot:E2R943
Length = 580
Score = 736 (264.1 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 137/240 (57%), Positives = 179/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 222 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 281
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 282 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEA 341
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G D + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 342 PGSKDHTPSQELALTQSVGGDSNADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 401
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 402 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 458
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 417 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 446
Score = 85 (35.0 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 39/175 (22%), Positives = 70/175 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S ++D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLQRRR-------KQDSGHLDLRNPEAALSPNFRSDSPV- 52
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S E + +P+ D++L LP + S+ + T
Sbjct: 53 ---PTVPTSGGPKPSTASAVPE--LATDPELEKKLLHHLSDLALTLPTDAVSIRLAISTP 107
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVSK 170
+ T + +LL KFA Q+LI + +DD + + +H KL M+ V++
Sbjct: 108 DAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAE 162
>RGD|1311750 [details] [associations]
symbol:Mettl3 "methyltransferase-like 3" species:10116 "Rattus
norvegicus" [GO:0001510 "RNA methylation" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA;ISO] InterPro:IPR007757 InterPro:IPR025848
Pfam:PF05063 PROSITE:PS51143 PROSITE:PS51563 RGD:1311750
GO:GO:0005634 EMBL:CH474040 eggNOG:COG4725
GeneTree:ENSGT00550000075058 GO:GO:0016422 KO:K05925 CTD:56339
HOGENOM:HOG000012669 HOVERGEN:HBG052521 OMA:TKKSRKH
OrthoDB:EOG4JQ3XC EMBL:BC097400 IPI:IPI00195653
RefSeq:NP_001019965.1 UniGene:Rn.139109 STRING:Q4V8G6
Ensembl:ENSRNOT00000017720 GeneID:361035 KEGG:rno:361035
UCSC:RGD:1311750 InParanoid:Q4V8G6 NextBio:674959
Genevestigator:Q4V8G6 Uniprot:Q4V8G6
Length = 580
Score = 729 (261.7 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 136/240 (56%), Positives = 178/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 222 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 281
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 282 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACVDSES 341
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 342 PGSKEHMPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 401
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 402 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 458
Score = 122 (48.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 417 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 446
Score = 92 (37.4 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S ++D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLQRRR-------KQDSGHLDLRNPEAALSPTFRSDSPV- 52
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S+ E + +P+ D++L LP + S+ + T
Sbjct: 53 ---PTAPTSSGPKPSTTSIVPE--LATDPELEKKLLHHLSDLALTLPTDAVSIRLAISTP 107
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVS--KGIK 173
+ T + +LL KFA Q+LI + +DD + + +H KL M+ V+ KG+
Sbjct: 108 DAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGLG 167
Query: 174 RKA 176
A
Sbjct: 168 EAA 170
>MGI|MGI:1927165 [details] [associations]
symbol:Mettl3 "methyltransferase like 3" species:10090 "Mus
musculus" [GO:0001510 "RNA methylation" evidence=ISO] [GO:0001734
"mRNA (N6-adenosine)-methyltransferase activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=ISO] [GO:0016556 "mRNA modification" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] [GO:0080009 "mRNA methylation"
evidence=ISO] InterPro:IPR007757 InterPro:IPR025848 Pfam:PF05063
PROSITE:PS51143 MGI:MGI:1927165 GO:GO:0005634 GO:GO:0016607
GO:GO:0003723 eggNOG:COG4725 GeneTree:ENSGT00550000075058
GO:GO:0016422 GO:GO:0001734 KO:K05925 CTD:56339
HOGENOM:HOG000012669 HOVERGEN:HBG052521 OrthoDB:EOG4JQ3XC
EMBL:AF283992 EMBL:AF135789 EMBL:AK009492 EMBL:AK085189
EMBL:BC012526 IPI:IPI00319214 IPI:IPI00623291 RefSeq:NP_062695.2
UniGene:Mm.271759 ProteinModelPortal:Q8C3P7 STRING:Q8C3P7
PhosphoSite:Q8C3P7 PaxDb:Q8C3P7 PRIDE:Q8C3P7
Ensembl:ENSMUST00000022767 GeneID:56335 KEGG:mmu:56335
UCSC:uc007tpc.1 InParanoid:Q8C3P7 ChiTaRS:METTL3 NextBio:312322
Bgee:Q8C3P7 CleanEx:MM_METTL3 Genevestigator:Q8C3P7
GermOnline:ENSMUSG00000022160 Uniprot:Q8C3P7
Length = 580
Score = 729 (261.7 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 136/240 (56%), Positives = 178/240 (74%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 222 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 281
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 282 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACVDSES 341
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIH 367
G + +L + +L+PPQWI CD+RYLD+++LGKFAV+MADPPWDIH
Sbjct: 342 PGSKEHMPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIH 401
Query: 368 MELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQ--DEGLLFLWV 425
MELPYGT++DDEMR+L IP LQD+G LFLWVTGRAMELGRECL L+ + DE +WV
Sbjct: 402 MELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDE---IIWV 458
Score = 122 (48.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 410 LKLFMLQDEGLLFLWVTGRAMELGRECLKL 439
L + +LQD+G LFLWVTGRAMELGRECL L
Sbjct: 417 LNIPVLQDDGFLFLWVTGRAMELGRECLNL 446
Score = 90 (36.7 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 41/179 (22%), Positives = 73/179 (40%)
Query: 1 MSDAWEEIQAIKSKRNSXXXXXXXXXXXXXDILERDGSLSPARNEEDSVDTSYQTEEDAI 60
MSD W IQA K + +S ++D RN E ++ +++++
Sbjct: 1 MSDTWSSIQAHKKQLDSLRERLQRRR-------KQDSGHLDLRNPEAALSPTFRSDSPV- 52
Query: 61 KLNPDXXXXXXXXXCDVSLTEEDAIKLNPDXXXXXXXXXCDVSLVLPITSQSL---MGTL 117
P S+ E + +P+ D++L LP + S+ + T
Sbjct: 53 ---PTAPTSSGPKPSTTSVAPE--LATDPELEKKLLHHLSDLALTLPTDAVSIRLAISTP 107
Query: 118 NQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVSVEHVKLLGMVNEVS--KGI 172
+ T + +LL KFA Q+LI + +DD + + +H KL M+ V+ KG+
Sbjct: 108 DAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVADKKGL 166
>TAIR|locus:2132731 [details] [associations]
symbol:MTA "mRNAadenosine methylase" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=ISS] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0080009
"mRNA methylation" evidence=IMP] InterPro:IPR007757 Pfam:PF05063
PROSITE:PS51143 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016607 GO:GO:0003723 EMBL:AF080119
EMBL:AL161518 eggNOG:COG4725 GO:GO:0016422 EMBL:AK227385
IPI:IPI00534419 PIR:E85112 PIR:T01901 RefSeq:NP_192814.1
UniGene:At.20163 UniGene:At.63691 ProteinModelPortal:O82486
IntAct:O82486 STRING:O82486 PaxDb:O82486 PRIDE:O82486
EnsemblPlants:AT4G10760.1 GeneID:826670 KEGG:ath:AT4G10760
GeneFarm:4529 TAIR:At4g10760 HOGENOM:HOG000077476 InParanoid:O82486
OMA:ELFARMH PhylomeDB:O82486 ProtClustDB:CLSN2686057
Genevestigator:O82486 GermOnline:AT4G10760 Uniprot:O82486
Length = 685
Score = 642 (231.1 bits), Expect = 2.0e-62, P = 2.0e-62
Identities = 122/220 (55%), Positives = 157/220 (71%)
Query: 197 DETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGT 256
D DV +LLSK S +EKQ + GEE+LDL+ +PTAKE + A +F+S+ G+QV+ YC + T
Sbjct: 316 DLKDVEALLSKKSFKEKQQSRTGEELLDLIHRPTAKEAATAAKFKSKGGSQVKYYCRYLT 375
Query: 257 RAECLRMKDTPNI-CTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVD--GAK 313
+ +C R++ +I C K HFR++I HTD SLGDCSFL+TC HM +CKYVHYE+D A
Sbjct: 376 KEDC-RLQSGSHIACNKRHFRRLIASHTDVSLGDCSFLDTCRHMKTCKYVHYELDMADAM 434
Query: 314 IKGISDISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPYG 373
+ G + +L QWI CD+R M +LG F V+MADPPWDIHMELPYG
Sbjct: 435 MAGPDKALKPLRADYCSEAELGEAQWINCDIRSFRMDILGTFGVVMADPPWDIHMELPYG 494
Query: 374 TMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLF 413
TM+DDEMR L +P LQ +GL+FLWVTGRAMELGRECL+L+
Sbjct: 495 TMADDEMRTLNVPSLQTDGLIFLWVTGRAMELGRECLELW 534
>FB|FBgn0002787 [details] [associations]
symbol:Rpn8 "Regulatory particle non-ATPase 8" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=NAS;IDA] [GO:0000502 "proteasome complex"
evidence=NAS;IDA] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0030425 "dendrite" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:AE013599 GO:GO:0022008 GO:GO:0008283 GO:GO:0030425
GO:GO:0006508 GO:GO:0004175 GO:GO:0008541 eggNOG:COG1310
GO:GO:0000022 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 BRENDA:3.4.25.1 OMA:RSIIALH
MEROPS:M67.973 EMBL:M64643 EMBL:AY089283 RefSeq:NP_523845.2
UniGene:Dm.770 ProteinModelPortal:P26270 SMR:P26270 DIP:DIP-22847N
IntAct:P26270 MINT:MINT-819762 STRING:P26270 PaxDb:P26270
EnsemblMetazoa:FBtr0072290 EnsemblMetazoa:FBtr0332921 GeneID:37894
KEGG:dme:Dmel_CG3416 UCSC:CG3416-RA CTD:37894 FlyBase:FBgn0002787
InParanoid:P26270 OrthoDB:EOG4BG7BS PhylomeDB:P26270
GenomeRNAi:37894 NextBio:805917 Bgee:P26270 GermOnline:CG3416
Uniprot:P26270
Length = 338
Score = 623 (224.4 bits), Expect = 2.6e-60, P = 2.6e-60
Identities = 116/146 (79%), Positives = 123/146 (84%)
Query: 628 MVGQEVVTSKXXXXXXXXXXXXDHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVP 687
M QEV +K DHFNRM KIGNQKRVVGVLLGCW+ KG+LDVSNSFAVP
Sbjct: 1 MPSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVP 60
Query: 688 FDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCT 747
FDEDDKD SVWFLDHDYLENMYGMFKKVNARE+VVGWYHTGPKLHQNDI INEL+RRYC
Sbjct: 61 FDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCP 120
Query: 748 NSVLVIIDAKPKELGLPTEAYRVVDE 773
NSVLVIIDAKPK+LGLPTEAY V+E
Sbjct: 121 NSVLVIIDAKPKDLGLPTEAYISVEE 146
Score = 522 (188.8 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 101/146 (69%), Positives = 118/146 (80%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE+VVGWYHTGPKLHQNDI INEL+RRYC NSVLVIIDAKPK+LGLPTEAY V+EVHD
Sbjct: 90 ARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHD 149
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DGSPT+KTF+HVPSEI HLLRDIKDTTVGSLSQ++TNQLMGLKGLN Q++
Sbjct: 150 DGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLR 209
Query: 978 EIEKYVGQVSRYWPPF-YVVVINLID 1002
+I++Y+ +V P + +V L D
Sbjct: 210 DIKQYLQRVGDSKMPINHQIVYQLQD 235
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 441 LNCQLSQDVEFTWPYLGWMSKFSLHHFFQVVYLAAMIRSIIALHNLINNKITNRDAEVNI 500
LN QL +D++ +G SK ++H Q+VY I ++ L ++ N++ T + +
Sbjct: 204 LNAQL-RDIKQYLQRVG-DSKMPINH--QIVYQLQDIFNL--LPDITNDQFTGT---MYV 254
Query: 501 EFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAE--KKEITKSKVEDKPQEDK 556
+ N + VVYLA+M+RSIIALHNLINNK+ NRDAE K + ++K ++K +DK
Sbjct: 255 KTNDQML----VVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKEAKEKNKDSKDK 308
>UNIPROTKB|Q3ZBD0 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9913 "Bos taurus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0000502 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH EMBL:BC103437 IPI:IPI00685826 RefSeq:NP_001029595.1
UniGene:Bt.49378 ProteinModelPortal:Q3ZBD0 SMR:Q3ZBD0 STRING:Q3ZBD0
MEROPS:M67.973 PRIDE:Q3ZBD0 Ensembl:ENSBTAT00000024515
GeneID:512456 KEGG:bta:512456 CTD:5713 HOVERGEN:HBG035951
InParanoid:Q3ZBD0 OrthoDB:EOG441QC3 NextBio:20870397 Uniprot:Q3ZBD0
Length = 322
Score = 568 (205.0 bits), Expect = 2.8e-54, P = 2.8e-54
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+ K+GNQKRVVGVLLG W+ K +LDVSNSFAVPFDEDDKD+SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMFKKVNARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 770 VVDE 773
V+E
Sbjct: 140 SVEE 143
Score = 475 (172.3 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 88/130 (67%), Positives = 107/130 (82%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 87 ARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHD 146
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 147 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 206
Query: 978 EIEKYVGQVS 987
+I Y+ +V+
Sbjct: 207 DIRGYLEKVA 216
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 512 VVYLAAMIRSIIALHNLINNKITNRDAEKKE------ITKSKVEDKPQEDKKPEIK 561
VVYLA++IRS++ALHNLINNKI NRDAEKKE K + +DK +E +K ++K
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEDSKKDRKDDKEKEKEKSDVK 314
Score = 122 (48.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAE 286
Score = 43 (20.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 530 NNKITNRDAEKKEITKSKVEDKPQEDKK 557
++K +D ++KE KS V+ + +++KK
Sbjct: 295 DSKKDRKDDKEKEKEKSDVKKEEKKEKK 322
>MGI|MGI:1351511 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1351511 GO:GO:0000502 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 CTD:5713
HOVERGEN:HBG035951 OrthoDB:EOG441QC3 EMBL:M64641 EMBL:M64640
EMBL:M64634 EMBL:M64635 EMBL:M64636 EMBL:M64637 EMBL:M64639
EMBL:AK031013 EMBL:AK159825 IPI:IPI00114667 PIR:A40556
RefSeq:NP_034947.1 UniGene:Mm.18347 ProteinModelPortal:P26516
SMR:P26516 IntAct:P26516 STRING:P26516 PhosphoSite:P26516
PaxDb:P26516 PRIDE:P26516 Ensembl:ENSMUST00000044106 GeneID:17463
KEGG:mmu:17463 InParanoid:P26516 NextBio:292104 Bgee:P26516
Genevestigator:P26516 GermOnline:ENSMUSG00000039067 Uniprot:P26516
Length = 321
Score = 568 (205.0 bits), Expect = 2.8e-54, P = 2.8e-54
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+ K+GNQKRVVGVLLG W+ K +LDVSNSFAVPFDEDDKD+SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMFKKVNARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 770 VVDE 773
V+E
Sbjct: 140 SVEE 143
Score = 478 (173.3 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 92/146 (63%), Positives = 113/146 (77%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 87 ARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHD 146
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 147 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 206
Query: 978 EIEKYVGQV-SRYWPPFYVVVINLID 1002
+I Y+ +V S P + ++ L D
Sbjct: 207 DIRSYLEKVASGKLPINHQIIYQLQD 232
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 512 VVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKPQEDKKPEIK 561
VVYLA++IRS++ALHNLINNKI NRDAEKKE + + K ++D K + K
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDDKEKEK 308
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAE 286
>RGD|1306902 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 RGD:1306902 GO:GO:0000502 EMBL:CH473972
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 OMA:RSIIALH CTD:5713 OrthoDB:EOG441QC3 IPI:IPI00359611
RefSeq:NP_001100896.1 UniGene:Rn.20659 IntAct:D4AEH3
Ensembl:ENSRNOT00000019104 GeneID:307821 KEGG:rno:307821
UCSC:RGD:1306902 NextBio:657930 Uniprot:D4AEH3
Length = 320
Score = 568 (205.0 bits), Expect = 2.8e-54, P = 2.8e-54
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+ K+GNQKRVVGVLLG W+ K +LDVSNSFAVPFDEDDKD+SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMFKKVNARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 770 VVDE 773
V+E
Sbjct: 140 SVEE 143
Score = 476 (172.6 bits), Expect = 2.6e-44, P = 2.6e-44
Identities = 88/130 (67%), Positives = 107/130 (82%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 87 ARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHD 146
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 147 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 206
Query: 978 EIEKYVGQVS 987
+I Y+ +V+
Sbjct: 207 DIRTYLEKVA 216
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 512 VVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKPQEDKKPEIK 561
VVYLA++IRS++ALHNLINNKI NRDAEKKE + + K ++D K + K
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDDKEKEK 308
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAE 286
>UNIPROTKB|P51665 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
eggNOG:COG1310 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH471166 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:D50063 EMBL:BC000338 EMBL:BC012606
IPI:IPI00019927 PIR:JC4154 PIR:S65491 RefSeq:NP_002802.2
UniGene:Hs.440604 PDB:2O95 PDB:2O96 PDBsum:2O95 PDBsum:2O96
ProteinModelPortal:P51665 SMR:P51665 DIP:DIP-27572N IntAct:P51665
MINT:MINT-5002613 STRING:P51665 PhosphoSite:P51665 DMDM:20532412
PaxDb:P51665 PeptideAtlas:P51665 PRIDE:P51665 DNASU:5713
Ensembl:ENST00000219313 GeneID:5713 KEGG:hsa:5713 UCSC:uc002fcq.3
GeneCards:GC16P074330 HGNC:HGNC:9565 HPA:CAB019379 MIM:157970
neXtProt:NX_P51665 PharmGKB:PA33911 InParanoid:P51665
PhylomeDB:P51665 ChiTaRS:PSMD7 EvolutionaryTrace:P51665
GenomeRNAi:5713 NextBio:22194 ArrayExpress:P51665 Bgee:P51665
CleanEx:HS_PSMD7 Genevestigator:P51665 GermOnline:ENSG00000103035
Uniprot:P51665
Length = 324
Score = 568 (205.0 bits), Expect = 2.8e-54, P = 2.8e-54
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+ K+GNQKRVVGVLLG W+ K +LDVSNSFAVPFDEDDKD+SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMFKKVNARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 770 VVDE 773
V+E
Sbjct: 140 SVEE 143
Score = 477 (173.0 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 88/130 (67%), Positives = 107/130 (82%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 87 ARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHD 146
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 147 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 206
Query: 978 EIEKYVGQVS 987
+I Y+ +V+
Sbjct: 207 DIRSYLEKVA 216
Score = 147 (56.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 512 VVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKP--QEDKKPE 559
VVYLA++IRS++ALHNLINNKI NRDAEKKE + K E K +EDK+ +
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAEKKE-GQEKEESKKDRKEDKEKD 307
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAE 286
>ZFIN|ZDB-GENE-030131-5541 [details] [associations]
symbol:psmd7 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 7 (Mov34 homolog)" species:7955 "Danio rerio"
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 ZFIN:ZDB-GENE-030131-5541 GO:GO:0000502
eggNOG:COG1310 GO:GO:0021551 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:BC044358 EMBL:BC066605 IPI:IPI00481317
RefSeq:NP_956083.1 UniGene:Dr.80368 SMR:Q7ZYX7 STRING:Q7ZYX7
Ensembl:ENSDART00000098229 GeneID:327330 KEGG:dre:327330
InParanoid:Q7ZYX7 NextBio:20809984 Uniprot:Q7ZYX7
Length = 327
Score = 561 (202.5 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 101/124 (81%), Positives = 116/124 (93%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+ K+G+QKRVVGVLLG W+ K +LDVSNSFAVPFDEDDKD+SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGSQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMFKKVNARE++VGWYHTGPKLH+NDI INEL+++YC+NSVLVIID KPK+LGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKQYCSNSVLVIIDVKPKDLGLPTEAYI 139
Query: 770 VVDE 773
V+E
Sbjct: 140 SVEE 143
Score = 476 (172.6 bits), Expect = 2.6e-44, P = 2.6e-44
Identities = 87/130 (66%), Positives = 109/130 (83%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL+++YC+NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 87 ARERIVGWYHTGPKLHKNDIAINELMKQYCSNSVLVIIDVKPKDLGLPTEAYISVEEVHD 146
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 147 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 206
Query: 978 EIEKYVGQVS 987
+I+ Y+ +V+
Sbjct: 207 DIKSYLEKVA 216
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 497 EVNI-EF--NFSLQHFSQ--VVYLAAMIRSIIALHNLINNKITNRDAEKKEITK---SKV 548
+VN+ EF F L+ Q VVYLA++IRS++ALHNLINNKI NRDAEKKE + SK
Sbjct: 239 DVNLQEFVKAFYLKTNDQMLVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKDDSKK 298
Query: 549 EDKPQEDK 556
E K ++DK
Sbjct: 299 EKKDEKDK 306
Score = 122 (48.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 259 VVYLASLIRSVVALHNLINNKIANRDAE 286
Score = 42 (19.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 530 NNKITNRDAEKKEITKSKVEDKPQEDKK 557
+ K ++D +K++ +K EDK +DKK
Sbjct: 302 DEKDKDKDKDKEKDASAKKEDK--KDKK 327
>GENEDB_PFALCIPARUM|PF07_0123 [details] [associations]
symbol:PF07_0123 "mRNA
(N6-adenosine)-methyltransferase, putative" species:5833
"Plasmodium falciparum" [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=ISS] [GO:0009451 "RNA modification" evidence=ISS]
InterPro:IPR007757 Pfam:PF05063 PROSITE:PS51143 EMBL:AL844506
GO:GO:0016422 KO:K05925 RefSeq:XP_001349190.1
ProteinModelPortal:Q8I6Z2 IntAct:Q8I6Z2 MINT:MINT-1598784
EnsemblProtists:PF07_0123:mRNA GeneID:2655176 KEGG:pfa:PF07_0123
EuPathDB:PlasmoDB:PF3D7_0729500 HOGENOM:HOG000283876
ProtClustDB:CLSZ2500659 Uniprot:Q8I6Z2
Length = 760
Score = 515 (186.3 bits), Expect = 9.7e-47, P = 9.7e-47
Identities = 99/232 (42%), Positives = 153/232 (65%)
Query: 191 KFKDNGDETDVM---SLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQ 247
K+K+ + +LL++P+ +EK++K+ IL ++ PT E ++F+ + +
Sbjct: 402 KYKEENKNNKINYLENLLNEPTAKEKKIKEEKTNILSIIEAPTVIEEMRIKKFQKKD-DS 460
Query: 248 VQEYCSHGTRAECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHY 307
V+ C + T+ C + C K+HF+KII HTD SLGDCS+L+TC H+++CK+VHY
Sbjct: 461 VKIICPYLTKKVCQKHNKE---CNKVHFKKIISEHTDVSLGDCSYLDTCRHIETCKFVHY 517
Query: 308 EVDGAKIKGISDISDEGNKSLLE-----KTKLYPPQWIQCDLRYLDMTVLGKF-AVIMAD 361
VD + + + ++S L K +Y PQWI+CDLR D+++ K+ +V+MAD
Sbjct: 518 AVDKDDQQMNMNTQENLSQSKLSFSSNIKENVYGPQWIRCDLRNFDLSIFNKYVSVVMAD 577
Query: 362 PPWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLF 413
PPWDIHM+LPYGTM+D+EM+ L + +QDEG++FLWVTGRAMEL RECL+++
Sbjct: 578 PPWDIHMDLPYGTMTDNEMKLLPVQLIQDEGMIFLWVTGRAMELARECLQIW 629
>WB|WBGene00004464 [details] [associations]
symbol:rpn-8 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0000003 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 477 (173.0 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 89/124 (71%), Positives = 101/124 (81%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+SK + KRVVGVLLG K LD+ NSFAVPFDEDDKD S WFLD DYLE+MY
Sbjct: 53 DHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKSTWFLDMDYLESMY 112
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMF KV A+EK+VGWYHTGPKLH+NDI INE ++R+C N VLVIIDA+PK +GLPTEAY
Sbjct: 113 GMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAEPKNIGLPTEAYI 172
Query: 770 VVDE 773
V E
Sbjct: 173 EVQE 176
Score = 461 (167.3 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 92/158 (58%), Positives = 114/158 (72%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+EK+VGWYHTGPKLH+NDI INE ++R+C N VLVIIDA+PK +GLPTEAY V EVHD
Sbjct: 120 AKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAEPKNIGLPTEAYIEVQEVHD 179
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+P KTF+HVPS+I HLLRDIKD T G+LSQR+T+QLMGL+GL Q++
Sbjct: 180 DGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIKDQTAGTLSQRITDQLMGLRGLQSQLE 239
Query: 978 EIEKYVGQVSRYWPP------FYVV-VINLIDKRSVTH 1008
IEKY+ + R P +YV V+NL+ VTH
Sbjct: 240 SIEKYLHDIVRGTLPVNHHVIYYVQEVLNLLP--DVTH 275
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 485 NLINNKITNRDAEV--NIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEKKE 542
NL+ + +T+ D V N++ N L VY+ +++RS++ALHNLI+NKI+ + AEK++
Sbjct: 268 NLLPD-VTHPDYIVSQNVQTNDQLM----CVYMGSLVRSVVALHNLIDNKISLQKAEKEQ 322
Query: 543 IT---KSKVEDKPQEDKKPEIK 561
T + K ++K ++DKK E K
Sbjct: 323 ETGEAEKKKDEKDKKDKKDEKK 344
>UNIPROTKB|O61792 [details] [associations]
symbol:rpn-8 "Protein RPN-8" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0000003
eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 477 (173.0 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 89/124 (71%), Positives = 101/124 (81%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DHFNR+SK + KRVVGVLLG K LD+ NSFAVPFDEDDKD S WFLD DYLE+MY
Sbjct: 53 DHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKSTWFLDMDYLESMY 112
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
GMF KV A+EK+VGWYHTGPKLH+NDI INE ++R+C N VLVIIDA+PK +GLPTEAY
Sbjct: 113 GMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAEPKNIGLPTEAYI 172
Query: 770 VVDE 773
V E
Sbjct: 173 EVQE 176
Score = 461 (167.3 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 92/158 (58%), Positives = 114/158 (72%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+EK+VGWYHTGPKLH+NDI INE ++R+C N VLVIIDA+PK +GLPTEAY V EVHD
Sbjct: 120 AKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAEPKNIGLPTEAYIEVQEVHD 179
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+P KTF+HVPS+I HLLRDIKD T G+LSQR+T+QLMGL+GL Q++
Sbjct: 180 DGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIKDQTAGTLSQRITDQLMGLRGLQSQLE 239
Query: 978 EIEKYVGQVSRYWPP------FYVV-VINLIDKRSVTH 1008
IEKY+ + R P +YV V+NL+ VTH
Sbjct: 240 SIEKYLHDIVRGTLPVNHHVIYYVQEVLNLLP--DVTH 275
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 485 NLINNKITNRDAEV--NIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEKKE 542
NL+ + +T+ D V N++ N L VY+ +++RS++ALHNLI+NKI+ + AEK++
Sbjct: 268 NLLPD-VTHPDYIVSQNVQTNDQLM----CVYMGSLVRSVVALHNLIDNKISLQKAEKEQ 322
Query: 543 IT---KSKVEDKPQEDKKPEIK 561
T + K ++K ++DKK E K
Sbjct: 323 ETGEAEKKKDEKDKKDKKDEKK 344
>UNIPROTKB|B4DXI8 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 GO:GO:0000502
InterPro:IPR024969 Pfam:PF13012 HOVERGEN:HBG035951
UniGene:Hs.440604 HGNC:HGNC:9565 ChiTaRS:PSMD7 EMBL:AC009120
EMBL:AK301996 IPI:IPI01009629 SMR:B4DXI8 STRING:B4DXI8
Ensembl:ENST00000540379 Uniprot:B4DXI8
Length = 247
Score = 477 (173.0 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 88/130 (67%), Positives = 107/130 (82%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEAY V+EVHD
Sbjct: 10 ARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHD 69
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+PT+KTF+HV SEI HLLRDIKDTTVG+LSQR+TNQ+ GLKGLN ++
Sbjct: 70 DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL 129
Query: 978 EIEKYVGQVS 987
+I Y+ +V+
Sbjct: 130 DIRSYLEKVA 139
Score = 300 (110.7 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 54/66 (81%), Positives = 61/66 (92%)
Query: 708 MYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEA 767
MYGMFKKVNARE++VGWYHTGPKLH+NDI INEL++RYC NSVLVIID KPK+LGLPTEA
Sbjct: 1 MYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEA 60
Query: 768 YRVVDE 773
Y V+E
Sbjct: 61 YISVEE 66
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 512 VVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKP--QEDKKPE 559
VVYLA++IRS++ALHNLINNKI NRDAEKKE + K E K +EDK+ +
Sbjct: 182 VVYLASLIRSVVALHNLINNKIANRDAEKKE-GQEKEESKKDRKEDKEKD 230
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 470 VVYLAAMIRSIIALHNLINNKITNRDAE 497
VVYLA++IRS++ALHNLINNKI NRDAE
Sbjct: 182 VVYLASLIRSVVALHNLINNKIANRDAE 209
>UNIPROTKB|H0YFV6 [details] [associations]
symbol:METTL3 "N6-adenosine-methyltransferase 70 kDa
subunit" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] InterPro:IPR025848 PROSITE:PS51563 GO:GO:0005634
GO:GO:0016422 EMBL:AE000658 HGNC:HGNC:17563 PRIDE:H0YFV6
Ensembl:ENST00000539760 Bgee:H0YFV6 Uniprot:H0YFV6
Length = 336
Score = 385 (140.6 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 73/151 (48%), Positives = 103/151 (68%)
Query: 198 ETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTR 257
+ ++ SLL++ S +E+Q K++ +EIL+LL TAKE+S+ E+FRS+ QVQE+C +GT+
Sbjct: 172 DLEIESLLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTK 231
Query: 258 AECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDG---AKI 314
EC++ D C KLHFR+II HTDESLGDCSFLNTCFHMD+CKYVHYE+D ++
Sbjct: 232 EECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEA 291
Query: 315 KGISDISDEGNKSLLEKT-------KLYPPQ 338
G D + +L + +L+PPQ
Sbjct: 292 PGSKDHTPSQELALTQSVGGDSSADRLFPPQ 322
Score = 73 (30.8 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 101 DVSLVLPITSQSL---MGTLNQEYTHLCLINLLHKFATQKLITINES--KDDDNQVEIVS 155
D++L LP + S+ + T + T + +LL KFA Q+LI + +DD + +
Sbjct: 38 DLALTLPTDAVSICLAISTPDAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTY 97
Query: 156 VEHVKLLGMVNEVSK 170
+H KL M+ V++
Sbjct: 98 ADHSKLSAMMGAVAE 112
>ASPGD|ASPL0000029143 [details] [associations]
symbol:AN5121 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:BN001305 InterPro:IPR024969 Pfam:PF13012 HOGENOM:HOG000209236
OMA:RSIIALH EnsemblFungi:CADANIAT00003105 Uniprot:C8VEY3
Length = 349
Score = 423 (154.0 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 79/126 (62%), Positives = 103/126 (81%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+ R +K G +KRVVGVLLG G G + VSNSFAVPF+ED+KD SVWFLDH+++E+M
Sbjct: 28 DHYGRSAK-GTRKRVVGVLLGEHIG-GNVRVSNSFAVPFEEDEKDPSVWFLDHNFVESMR 85
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFKK+NAREK++GWYH+GPKL +D++INEL +RY N +LVI+D +PKE+G+PT+AY
Sbjct: 86 DMFKKINAREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVIVDVQPKEVGVPTDAYF 145
Query: 770 VVDEDK 775
VDE K
Sbjct: 146 AVDEIK 151
Score = 378 (138.1 bits), Expect = 8.9e-34, P = 8.9e-34
Identities = 73/157 (46%), Positives = 110/157 (70%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
AREK++GWYH+GPKL +D++INEL +RY N +LVI+D +PKE+G+PT+AY VDE+ D
Sbjct: 93 AREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVIVDVQPKEVGVPTDAYFAVDEIKD 152
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+ T++TF H PS I HLLRDI+D VG+LS R+T+QL L+GL+ +++
Sbjct: 153 DGTTTSRTFVHTPSTIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITSQLQSLQGLHLRLR 212
Query: 978 EIEKYVGQVSRYWPPF-YVVVINLIDKRSVT-HLSGP 1012
+I +Y+ +V + P + ++ NL D ++ +LS P
Sbjct: 213 DIGQYLQKVLDHELPVNHAILGNLQDVFNLLPNLSTP 249
>TAIR|locus:2166449 [details] [associations]
symbol:RPN8A "AT5G05780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000502
GO:GO:0009965 eggNOG:COG1310 EMBL:AB005237 InterPro:IPR024969
Pfam:PF13012 KO:K03038 EMBL:U54560 EMBL:AF378878 EMBL:BT002610
EMBL:AY087393 IPI:IPI00538047 RefSeq:NP_196197.1 UniGene:At.20537
UniGene:At.67787 ProteinModelPortal:O24412 SMR:O24412 IntAct:O24412
STRING:O24412 PaxDb:O24412 PRIDE:O24412 EnsemblPlants:AT5G05780.1
GeneID:830463 KEGG:ath:AT5G05780 TAIR:At5g05780
HOGENOM:HOG000209236 InParanoid:O24412 OMA:RSIIALH PhylomeDB:O24412
ProtClustDB:PLN03246 Genevestigator:O24412 GermOnline:AT5G05780
Uniprot:O24412
Length = 308
Score = 419 (152.6 bits), Expect = 3.5e-38, P = 3.5e-38
Identities = 76/126 (60%), Positives = 101/126 (80%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+NR++K + KRVVGVLLG +G++DV+NS+AVPF+EDDKD S+WFLDH+Y E+M+
Sbjct: 29 DHYNRVAK-DSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMF 86
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFK++NA+E VVGWY TGPKL +ND+ ++ L Y N VLVIID +PKELG+PT+AY
Sbjct: 87 HMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYY 146
Query: 770 VVDEDK 775
V+E K
Sbjct: 147 AVEEVK 152
Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 62/130 (47%), Positives = 86/130 (66%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+E VVGWY TGPKL +ND+ ++ L Y N VLVIID +PKELG+PT+AY V+EV +
Sbjct: 94 AKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKE 153
Query: 918 DGSPTT-KTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQI 976
+ + + K F HV +EI HLLRD+KDTT+ +L+ VT +L LKGL+ ++
Sbjct: 154 NATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARL 213
Query: 977 KEIEKYVGQV 986
+EI Y+ V
Sbjct: 214 REIRSYLDLV 223
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 485 NLINNKITNRDAEVNIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEKKEIT 544
NL+ N N E+ F+ V+YL+++IRS+IALHNLINNK+ N++ EK E +
Sbjct: 243 NLLPNLNVN---ELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDS 299
Query: 545 K 545
K
Sbjct: 300 K 300
>UNIPROTKB|G4NCJ9 [details] [associations]
symbol:MGG_01059 "26S proteasome regulatory subunit rpn-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CM001235 GO:GO:0000502 InterPro:IPR024969 Pfam:PF13012
KO:K03038 RefSeq:XP_003717880.1 ProteinModelPortal:G4NCJ9
SMR:G4NCJ9 EnsemblFungi:MGG_01059T0 GeneID:2674847
KEGG:mgr:MGG_01059 Uniprot:G4NCJ9
Length = 357
Score = 419 (152.6 bits), Expect = 3.5e-38, P = 3.5e-38
Identities = 83/129 (64%), Positives = 102/129 (79%)
Query: 650 DHFNRMSKIGNQ---KRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLE 706
DH+NR S NQ KRVVGVLLG GK + VSNSFAVPF+ED+K+ SVWFLDH+Y+E
Sbjct: 28 DHYNRES--ANQTKNKRVVGVLLGQNDGKNVR-VSNSFAVPFEEDEKNPSVWFLDHNYVE 84
Query: 707 NMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTE 766
+M MFKKVNAREK++GWYH+GPKL +D++INEL +RY N +LVIID +PKE G+PT+
Sbjct: 85 SMNDMFKKVNAREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVIIDVQPKEAGVPTD 144
Query: 767 AYRVVDEDK 775
AY VDE K
Sbjct: 145 AYFAVDEIK 153
Score = 377 (137.8 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 75/157 (47%), Positives = 108/157 (68%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
AREK++GWYH+GPKL +D++INEL +RY N +LVIID +PKE G+PT+AY VDE+ D
Sbjct: 95 AREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVIIDVQPKEAGVPTDAYFAVDEIKD 154
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DG+ T++TF H PS I HLLRDI+D VG+LS R+TNQL L+GL+ +++
Sbjct: 155 DGTATSRTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRLTNQLQSLQGLHLRLR 214
Query: 978 EIEKYVGQV-SRYWPPFYVVVINLIDKRSVT-HLSGP 1012
+I+ Y+ +V P + ++ NL D ++ +LS P
Sbjct: 215 DIQAYLQKVLDGDLPVNHAILGNLQDVFNLLPNLSTP 251
>TAIR|locus:2074653 [details] [associations]
symbol:MEE34 "AT3G11270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010564 "regulation of
cell cycle process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009793
GO:GO:0030163 GO:GO:0000502 EMBL:AC073395 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 ProtClustDB:PLN03246
MEROPS:M67.973 EMBL:AY258412 EMBL:AK228032 IPI:IPI00536063
RefSeq:NP_187736.1 UniGene:At.39785 ProteinModelPortal:Q9C774
SMR:Q9C774 IntAct:Q9C774 STRING:Q9C774 PRIDE:Q9C774 DNASU:820298
EnsemblPlants:AT3G11270.1 GeneID:820298 KEGG:ath:AT3G11270
TAIR:At3g11270 InParanoid:Q9C774 OMA:INAKEHI PhylomeDB:Q9C774
Genevestigator:Q9C774 Uniprot:Q9C774
Length = 310
Score = 415 (151.1 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 75/126 (59%), Positives = 99/126 (78%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+NR++K KRVVGVLLG +G +DV+NS+AVPF+EDDKD S+WFLDH+Y E+M+
Sbjct: 29 DHYNRVAK-DTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFLDHNYHESMF 86
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFK++NA+E +VGWY TGPKL +ND+ ++ L Y N VLVIID +PKELG+PT+AY
Sbjct: 87 HMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYY 146
Query: 770 VVDEDK 775
V+E K
Sbjct: 147 AVEEVK 152
Score = 319 (117.4 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 61/130 (46%), Positives = 87/130 (66%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+E +VGWY TGPKL +ND+ ++ L Y N VLVIID +PKELG+PT+AY V+EV +
Sbjct: 94 AKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKE 153
Query: 918 DGSPTTK-TFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQI 976
+ + ++ F HVP+EI HLLRD+KDTT+ +L+ VT +L LKGL+ ++
Sbjct: 154 NATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARL 213
Query: 977 KEIEKYVGQV 986
+EI Y+ V
Sbjct: 214 REIRTYLDLV 223
>POMBASE|SPCC1682.10 [details] [associations]
symbol:rpn8 "19S proteasome regulatory subunit Rpn8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPCC1682.10 GO:GO:0005829 GO:GO:0007346
GO:GO:0005635 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0008541 eggNOG:COG1310 GO:GO:0004843 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 MEROPS:M67.973
PIR:T41067 RefSeq:NP_587803.1 ProteinModelPortal:O74440 SMR:O74440
IntAct:O74440 STRING:O74440 PRIDE:O74440 EnsemblFungi:SPCC1682.10.1
GeneID:2538912 KEGG:spo:SPCC1682.10 OMA:KKINANE OrthoDB:EOG4QC4FM
NextBio:20800090 Uniprot:O74440
Length = 324
Score = 400 (145.9 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 76/150 (50%), Positives = 108/150 (72%)
Query: 624 EVSKMVGQEVVTSKXXXXXXXXXXXXDHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNS 683
E S +V Q+V+ D +NR +K G ++RVVG+LLG G +++V+NS
Sbjct: 8 ETSTIVPQQVIVHPLVLLSAV-----DSYNRSAK-GTKRRVVGILLGQNNGD-VVNVANS 60
Query: 684 FAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIR 743
+A+PF+ED+K+ SVWFLDH+++E+M MFKK+NA EK+VGWYHTGP+L +D++IN L++
Sbjct: 61 YAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLK 120
Query: 744 RYCTNSVLVIIDAKPKELGLPTEAYRVVDE 773
+Y N VLVIID KPK +GLPT AY +DE
Sbjct: 121 KYIPNPVLVIIDVKPKSVGLPTNAYFAIDE 150
Score = 361 (132.1 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 66/129 (51%), Positives = 90/129 (69%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A EK+VGWYHTGP+L +D++IN L+++Y N VLVIID KPK +GLPT AY +DE+ D
Sbjct: 94 ANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIED 153
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DGS +++TF H+PS I HLLRD +D +VG+L+ RVT Q L+GL Q++
Sbjct: 154 DGSKSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGTLATRVTQQAQSLQGLGQRLT 213
Query: 978 EIEKYVGQV 986
EI Y+ +V
Sbjct: 214 EIADYLRKV 222
>DICTYBASE|DDB_G0279633 [details] [associations]
symbol:psmD7 "26S proteasome non-ATPase regulatory
subunit 7" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 dictyBase:DDB_G0279633 GenomeReviews:CM000152_GR
GO:GO:0006511 EMBL:AAFI02000032 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 OMA:RSIIALH MEROPS:M67.973
RefSeq:XP_641565.1 ProteinModelPortal:Q54WI8 SMR:Q54WI8
STRING:Q54WI8 EnsemblProtists:DDB0232987 GeneID:8622140
KEGG:ddi:DDB_G0279633 ProtClustDB:CLSZ2434496 Uniprot:Q54WI8
Length = 325
Score = 398 (145.2 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 73/124 (58%), Positives = 95/124 (76%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+NR++K N KRVVG LLG KG++DVSN + +PF+ED+ + ++WFLDH++ ENM+
Sbjct: 20 DHYNRVAKDTN-KRVVGALLGS-NNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMF 77
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFKK+NARE VVGWY TGPK+ D INEL RRY N V+VIID PKELG+PT++Y
Sbjct: 78 AMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYV 137
Query: 770 VVDE 773
V+E
Sbjct: 138 TVEE 141
Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 62/141 (43%), Positives = 90/141 (63%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
ARE VVGWY TGPK+ D INEL RRY N V+VIID PKELG+PT++Y V+E++
Sbjct: 85 ARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINK 144
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
D S +T F H+PS I HLLRD+KD+++ SL+ ++T++ + LK L ++
Sbjct: 145 DTSESTMRFQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQ 204
Query: 978 EIEKYVGQV-SRYWPPFYVVV 997
E++ Y+ V PP + ++
Sbjct: 205 EMQHYLKLVCDGTLPPNHQII 225
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 464 LHHFFQVVYLAAMI--RSIIALHNLINNKITNRDAEVNIEFNFSLQHFS--QVVYLAAMI 519
+ H+ ++V + II I N N +A I +F++Q+ V+YL++MI
Sbjct: 206 MQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNAN-EISKSFAVQNNDTMSVIYLSSMI 264
Query: 520 RSIIALHNLINNKITNRDAEKK 541
RSIIALHNLI NK NR+AEKK
Sbjct: 265 RSIIALHNLIINKTANREAEKK 286
>CGD|CAL0002371 [details] [associations]
symbol:RPN8 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 386 (140.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 66/126 (52%), Positives = 102/126 (80%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+NR++K ++KRVVGV+LG + V+NS+A+PF+ED+K+ VWFLDH+++++M
Sbjct: 30 DHYNRVAK-DSKKRVVGVILGD-NSTDTIKVTNSYAIPFEEDEKNPGVWFLDHNFIDSMG 87
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFKK+NA+EK++GWYH+GPKL +D++INE+ RRY N +L+I+D +P+E+G+PT+AY
Sbjct: 88 EMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVDVQPREVGIPTDAYF 147
Query: 770 VVDEDK 775
VD+ K
Sbjct: 148 AVDDIK 153
Score = 337 (123.7 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 62/129 (48%), Positives = 89/129 (68%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+EK++GWYH+GPKL +D++INE+ RRY N +L+I+D +P+E+G+PT+AY VD++ +
Sbjct: 95 AKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVDVQPREVGIPTDAYFAVDDIKN 154
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DGS KTF HVPS I HLLRDI+D G+LS RV+ L GL+Q++
Sbjct: 155 DGSAAEKTFIHVPSLIEAEEAEEIGVEHLLRDIRDQAAGNLSLRVSETHQSLLGLHQKLG 214
Query: 978 EIEKYVGQV 986
EI Y+ +V
Sbjct: 215 EIANYLDKV 223
>UNIPROTKB|Q59YL2 [details] [associations]
symbol:RPN8 "Likely 26S proteasome regulatory particle
subunit Rpn8p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 386 (140.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 66/126 (52%), Positives = 102/126 (80%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+NR++K ++KRVVGV+LG + V+NS+A+PF+ED+K+ VWFLDH+++++M
Sbjct: 30 DHYNRVAK-DSKKRVVGVILGD-NSTDTIKVTNSYAIPFEEDEKNPGVWFLDHNFIDSMG 87
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYR 769
MFKK+NA+EK++GWYH+GPKL +D++INE+ RRY N +L+I+D +P+E+G+PT+AY
Sbjct: 88 EMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVDVQPREVGIPTDAYF 147
Query: 770 VVDEDK 775
VD+ K
Sbjct: 148 AVDDIK 153
Score = 337 (123.7 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 62/129 (48%), Positives = 89/129 (68%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHD 917
A+EK++GWYH+GPKL +D++INE+ RRY N +L+I+D +P+E+G+PT+AY VD++ +
Sbjct: 95 AKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVDVQPREVGIPTDAYFAVDDIKN 154
Query: 918 DGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIK 977
DGS KTF HVPS I HLLRDI+D G+LS RV+ L GL+Q++
Sbjct: 155 DGSAAEKTFIHVPSLIEAEEAEEIGVEHLLRDIRDQAAGNLSLRVSETHQSLLGLHQKLG 214
Query: 978 EIEKYVGQV 986
EI Y+ +V
Sbjct: 215 EIANYLDKV 223
>SGD|S000005787 [details] [associations]
symbol:RPN8 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034515 "proteasome storage granule" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 SGD:S000005787 EMBL:BK006948 GO:GO:0008541
GO:GO:0006511 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 RefSeq:NP_014907.3 GeneID:854437
KEGG:sce:YOR264W GO:GO:0034515 RefSeq:NP_014904.3 PDB:4B4T
PDBsum:4B4T GeneID:854435 KEGG:sce:YOR261C KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 OrthoDB:EOG4QC4FM
EMBL:Z75169 EMBL:AY558039 PIR:S67158 ProteinModelPortal:Q08723
SMR:Q08723 DIP:DIP-1574N IntAct:Q08723 MINT:MINT-405204
STRING:Q08723 PaxDb:Q08723 PeptideAtlas:Q08723 EnsemblFungi:YOR261C
NextBio:976670 Genevestigator:Q08723 GermOnline:YOR261C
Uniprot:Q08723
Length = 338
Score = 351 (128.6 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 64/127 (50%), Positives = 95/127 (74%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+ R N KR VGV+LG + V+NSFA+PF+ED+K++ VWFLDH+Y+ENM
Sbjct: 20 DHYERTQTKEN-KRCVGVILGD-ANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMN 77
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNS-VLVIIDAKPKELGLPTEAY 768
M KK+NA+EK++GWYH+GPKL +D++INEL ++Y N+ +L+I+D K + +GLPT+AY
Sbjct: 78 EMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAY 137
Query: 769 RVVDEDK 775
+++ K
Sbjct: 138 VAIEQVK 144
Score = 334 (122.6 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 60/130 (46%), Positives = 91/130 (70%)
Query: 858 AREKVVGWYHTGPKLHQNDIQINELIRRYCTNS-VLVIIDAKPKELGLPTEAYRVVDEVH 916
A+EK++GWYH+GPKL +D++INEL ++Y N+ +L+I+D K + +GLPT+AY +++V
Sbjct: 85 AKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVK 144
Query: 917 DDGSPTTKTFDHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQI 976
DDG+ T KTF H+P I HLLRD++D G LS R+TNQL LKGL ++
Sbjct: 145 DDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKL 204
Query: 977 KEIEKYVGQV 986
K++ +Y+ +V
Sbjct: 205 KDVVEYLDKV 214
>CGD|CAL0004692 [details] [associations]
symbol:orf19.1476 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0007126 "meiosis"
evidence=IEA] [GO:0080009 "mRNA methylation" evidence=IEA]
[GO:0001734 "mRNA (N6-adenosine)-methyltransferase activity"
evidence=IEA] InterPro:IPR007757 Pfam:PF05063 PROSITE:PS51143
CGD:CAL0004692 GO:GO:0006139 EMBL:AACQ01000008 EMBL:AACQ01000007
GO:GO:0008168 GO:GO:0032259 eggNOG:COG4725 RefSeq:XP_722386.1
RefSeq:XP_722525.1 STRING:Q5ALV0 GeneID:3635741 GeneID:3635998
KEGG:cal:CaO19.1476 KEGG:cal:CaO19.9051 Uniprot:Q5ALV0
Length = 543
Score = 364 (133.2 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 77/175 (44%), Positives = 108/175 (61%)
Query: 272 KLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHY--------EVDGA----------K 313
++HF II HTD +LGDCS+L+TC + SC+Y+HY E+ + K
Sbjct: 240 RIHFLPIINNHTDLNLGDCSYLDTCHKLKSCRYLHYYTLTPMKKELSHSSKEEQQQRQIK 299
Query: 314 IKGIS-DISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPY 372
+KG+ I D ++S E PPQWI CD+R L ++LGKFA I++DP WDIHM LPY
Sbjct: 300 LKGLEYTIGDCFSESFREPL---PPQWINCDVRCLPFSILGKFAAIISDPAWDIHMSLPY 356
Query: 373 GTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKL--FMLQDEGLLFLWV 425
GT DDE+ L + +LQDEG++ LWVTGR++E+GR L + + DE +W+
Sbjct: 357 GTCKDDELLSLPMHELQDEGIIMLWVTGRSIEIGRRALLKWGYQIYDE---MIWI 408
Score = 42 (19.8 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 25/150 (16%), Positives = 62/150 (41%)
Query: 87 LNPDXXXXXXXXXCDVSLVLPITSQS--LMGTLNQEYT-HLCLINLLHKFATQKLITINE 143
LN D ++ ++ P+ +S L T +++ ++ N++ ++ + +N
Sbjct: 16 LNQDNKILDTPIYGELWIIGPLIQKSSNLRFTSTKDFLDYIIQFNIISGYSLEFSKDLNN 75
Query: 144 SKDDDNQVEIVSVEHVKLLGMVNEVSKGIKRKAXXXXXXXXXX-XXLKKFKDNGDETDVM 202
+ D + +++S+ +L M+ KG + + L + + + D++
Sbjct: 76 NIDIKHLPKLISINFKGVL-MLQSRLKGKQTFSQISNSKNHKLPTNLLQILEMSSKRDIL 134
Query: 203 SLLSKPSIREKQVKQIGEEILDLLTKPTAK 232
S S + E + +L+ KPTA+
Sbjct: 135 PYTSTNSSLSSDLSFDVEFLQELINKPTAR 164
>UNIPROTKB|Q5ALV0 [details] [associations]
symbol:IME4 "Putative uncharacterized protein IME4"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007757 Pfam:PF05063
PROSITE:PS51143 CGD:CAL0004692 GO:GO:0006139 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0008168 GO:GO:0032259 eggNOG:COG4725
RefSeq:XP_722386.1 RefSeq:XP_722525.1 STRING:Q5ALV0 GeneID:3635741
GeneID:3635998 KEGG:cal:CaO19.1476 KEGG:cal:CaO19.9051
Uniprot:Q5ALV0
Length = 543
Score = 364 (133.2 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 77/175 (44%), Positives = 108/175 (61%)
Query: 272 KLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHY--------EVDGA----------K 313
++HF II HTD +LGDCS+L+TC + SC+Y+HY E+ + K
Sbjct: 240 RIHFLPIINNHTDLNLGDCSYLDTCHKLKSCRYLHYYTLTPMKKELSHSSKEEQQQRQIK 299
Query: 314 IKGIS-DISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPY 372
+KG+ I D ++S E PPQWI CD+R L ++LGKFA I++DP WDIHM LPY
Sbjct: 300 LKGLEYTIGDCFSESFREPL---PPQWINCDVRCLPFSILGKFAAIISDPAWDIHMSLPY 356
Query: 373 GTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKL--FMLQDEGLLFLWV 425
GT DDE+ L + +LQDEG++ LWVTGR++E+GR L + + DE +W+
Sbjct: 357 GTCKDDELLSLPMHELQDEGIIMLWVTGRSIEIGRRALLKWGYQIYDE---MIWI 408
Score = 42 (19.8 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 25/150 (16%), Positives = 62/150 (41%)
Query: 87 LNPDXXXXXXXXXCDVSLVLPITSQS--LMGTLNQEYT-HLCLINLLHKFATQKLITINE 143
LN D ++ ++ P+ +S L T +++ ++ N++ ++ + +N
Sbjct: 16 LNQDNKILDTPIYGELWIIGPLIQKSSNLRFTSTKDFLDYIIQFNIISGYSLEFSKDLNN 75
Query: 144 SKDDDNQVEIVSVEHVKLLGMVNEVSKGIKRKAXXXXXXXXXX-XXLKKFKDNGDETDVM 202
+ D + +++S+ +L M+ KG + + L + + + D++
Sbjct: 76 NIDIKHLPKLISINFKGVL-MLQSRLKGKQTFSQISNSKNHKLPTNLLQILEMSSKRDIL 134
Query: 203 SLLSKPSIREKQVKQIGEEILDLLTKPTAK 232
S S + E + +L+ KPTA+
Sbjct: 135 PYTSTNSSLSSDLSFDVEFLQELINKPTAR 164
>SGD|S000003160 [details] [associations]
symbol:IME4 "Probable mRNA N6-adenosine methyltransferase
involved in meiosis" species:4932 "Saccharomyces cerevisiae"
[GO:0007126 "meiosis" evidence=IEA;IMP] [GO:0080009 "mRNA
methylation" evidence=ISS;IMP] [GO:0016422 "mRNA
(2'-O-methyladenosine-N6-)-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030435 "sporulation
resulting in formation of a cellular spore" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0001734 "mRNA (N6-adenosine)-methyltransferase
activity" evidence=ISS;IMP] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007757 Pfam:PF05063 PROSITE:PS51143
SGD:S000003160 GO:GO:0005634 GO:GO:0007126 EMBL:X91837
EMBL:BK006941 GO:GO:0030435 GO:GO:0003723 RefSeq:NP_011323.3
GeneID:852683 KEGG:sce:YGL192W EMBL:U30859 EMBL:D23721 EMBL:Z72714
PIR:S48509 RefSeq:NP_878073.3 ProteinModelPortal:P41833
DIP:DIP-1382N IntAct:P41833 MINT:MINT-399649 STRING:P41833
EnsemblFungi:YGL192W GeneID:1466453 KEGG:sce:YGL188C-A CYGD:YGL192w
eggNOG:COG4725 GeneTree:ENSGT00550000075058 HOGENOM:HOG000247956
OrthoDB:EOG476P80 NextBio:972002 Genevestigator:P41833
GermOnline:YGL192W GO:GO:0016422 GO:GO:0001734 Uniprot:P41833
Length = 600
Score = 285 (105.4 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 69/168 (41%), Positives = 97/168 (57%)
Query: 253 SHGTRAECLRMKD--TPNIC--TKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYE 308
+H EC++ K PNI T + T L C +++ ++ SC +
Sbjct: 230 NHPGLIECIQSKIHFIPNIKPQTDISLGDCSYLDTCHKLNTCRYIHYLQYIPSCLQERAD 289
Query: 309 VDGA-KIKGI-SDISDE----GNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADP 362
+ A + K I S++S GN S K P QWI+CD+R D VLGKF+V++ADP
Sbjct: 290 RETASENKRIRSNVSIPFYTLGNCSAHCIKKALPAQWIRCDVRKFDFRVLGKFSVVIADP 349
Query: 363 PWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECL 410
W+IHM LPYGT +D E+ L + +LQDEG++FLWVTGRA+ELG+E L
Sbjct: 350 AWNIHMNLPYGTCNDIELLGLPLHELQDEGIIFLWVTGRAIELGKESL 397
Score = 37 (18.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 723 GWYHTGPKLHQNDIQINELIRRY 745
GW+ G +L N I ++ R+Y
Sbjct: 497 GWFTIGNQLTGNCIYEMDVERKY 519
Score = 37 (18.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 864 GWYHTGPKLHQNDIQINELIRRY 886
GW+ G +L N I ++ R+Y
Sbjct: 497 GWFTIGNQLTGNCIYEMDVERKY 519
>FB|FBgn0037270 [details] [associations]
symbol:CG9769 species:7227 "Drosophila melanogaster"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0035071 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
EMBL:AY118972 RefSeq:NP_649489.1 UniGene:Dm.11029
ProteinModelPortal:Q9VN50 SMR:Q9VN50 IntAct:Q9VN50 MINT:MINT-891663
STRING:Q9VN50 MEROPS:M67.975 PaxDb:Q9VN50 PRIDE:Q9VN50
EnsemblMetazoa:FBtr0078892 GeneID:40587 KEGG:dme:Dmel_CG9769
UCSC:CG9769-RA FlyBase:FBgn0037270 InParanoid:Q9VN50 KO:K03249
OMA:HPVVLFQ OrthoDB:EOG43TXBB PhylomeDB:Q9VN50 ChiTaRS:CG9769
GenomeRNAi:40587 NextBio:819523 Bgee:Q9VN50 HAMAP:MF_03005
Uniprot:Q9VN50
Length = 280
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D F R + + RV+G LLG KG+++V+N F VP E D + Y +MY
Sbjct: 20 DAFERRN--ADSHRVIGTLLGS-VDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMY 73
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIID 755
+ +KVN+ E VVGW+ TG + + I+E R C N V + +D
Sbjct: 74 DLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVD 119
>UNIPROTKB|E1C050 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ
CTD:8665 EMBL:AC140789 IPI:IPI00578336 RefSeq:XP_421624.1
PRIDE:E1C050 Ensembl:ENSGALT00000008544 GeneID:423748
KEGG:gga:423748 NextBio:20826172 Uniprot:E1C050
Length = 332
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 37/119 (31%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D F R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 79 DSFERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 132
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 133 ELHKKVSPSEIILGWYATGHDITEHSVLIHEYYSREAHNPIHLTVDTSLQNSRMSIKAY 191
>UNIPROTKB|O00303 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA;TAS] [GO:0003743 "translation initiation factor
activity" evidence=IC;IDA;TAS] [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 GO:GO:0008234 GO:GO:0006508 GO:GO:0003743
eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
KO:K03249 HAMAP:MF_03005 Reactome:REACT_1762 HOGENOM:HOG000241154
EMBL:U94855 EMBL:AK095574 EMBL:AK289637 EMBL:AK291354 EMBL:BT006894
EMBL:CR456959 EMBL:BC000490 IPI:IPI00941255 RefSeq:NP_003745.1
UniGene:Hs.516023 ProteinModelPortal:O00303 SMR:O00303
DIP:DIP-35580N IntAct:O00303 MINT:MINT-5000761 STRING:O00303
MEROPS:M67.974 PhosphoSite:O00303 PaxDb:O00303 PRIDE:O00303
DNASU:8665 Ensembl:ENST00000309828 Ensembl:ENST00000533626
GeneID:8665 KEGG:hsa:8665 UCSC:uc001mfw.3 CTD:8665
GeneCards:GC11P007966 HGNC:HGNC:3275 HPA:HPA049250 MIM:603914
neXtProt:NX_O00303 PharmGKB:PA162384806 HOVERGEN:HBG107843
InParanoid:O00303 OrthoDB:EOG44XJHN PhylomeDB:O00303
GenomeRNAi:8665 NextBio:32503 ArrayExpress:O00303 Bgee:O00303
CleanEx:HS_EIF3F Genevestigator:O00303 GermOnline:ENSG00000175390
Uniprot:O00303
Length = 357
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 104 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 157
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 158 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
>UNIPROTKB|A5A6I3 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9598 "Pan troglodytes" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 KO:K03249 HAMAP:MF_03005
HOGENOM:HOG000241154 CTD:8665 HOVERGEN:HBG107843 OrthoDB:EOG44XJHN
EMBL:AB222111 RefSeq:NP_001104282.1 UniGene:Ptr.2608
ProteinModelPortal:A5A6I3 STRING:A5A6I3 GeneID:451007
KEGG:ptr:451007 InParanoid:A5A6I3 NextBio:20833681 Uniprot:A5A6I3
Length = 361
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 108 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 161
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 162 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 220
>UNIPROTKB|Q4R5B8 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9541 "Macaca fascicularis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0008234 GO:GO:0006508 GO:GO:0003743 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 HAMAP:MF_03005 MEROPS:M67.974
HOVERGEN:HBG107843 OrthoDB:EOG44XJHN EMBL:AB169626
ProteinModelPortal:Q4R5B8 Uniprot:Q4R5B8
Length = 361
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 108 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 161
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 162 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 220
>UNIPROTKB|B3KSH1 [details] [associations]
symbol:EIF3F "HCG1784554, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CH471064 GO:GO:0003743 InterPro:IPR024969 Pfam:PF13012
OMA:HPVVLFQ HOGENOM:HOG000241154 UniGene:Hs.516023 HGNC:HGNC:3275
HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456 EMBL:AK093511
IPI:IPI00654777 SMR:B3KSH1 IntAct:B3KSH1 STRING:B3KSH1
Ensembl:ENST00000537635 Uniprot:B3KSH1
Length = 372
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 119 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 172
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 173 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 231
>UNIPROTKB|E1BLZ8 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:DAAA02040761
IPI:IPI00837929 Ensembl:ENSBTAT00000049219 OMA:HHETMYE
Uniprot:E1BLZ8
Length = 384
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 131 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 184
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 185 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 243
>TAIR|locus:2061206 [details] [associations]
symbol:EIF2 "AT2G39990" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0009846 "pollen
germination" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0009790 GO:GO:0003743 eggNOG:COG1310 GO:GO:0009846
EMBL:AF002109 InterPro:IPR024969 Pfam:PF13012 KO:K03249 OMA:HPVVLFQ
HAMAP:MF_03005 EMBL:U54561 EMBL:AY045824 EMBL:AY091363
IPI:IPI00527838 PIR:H84823 RefSeq:NP_181528.1 UniGene:At.10968
ProteinModelPortal:O04202 SMR:O04202 STRING:O04202 PaxDb:O04202
PRIDE:O04202 EnsemblPlants:AT2G39990.1 GeneID:818587
KEGG:ath:AT2G39990 GeneFarm:2126 TAIR:At2g39990
HOGENOM:HOG000241154 InParanoid:O04202 PhylomeDB:O04202
ProtClustDB:CLSN2683386 Genevestigator:O04202 GermOnline:AT2G39990
Uniprot:O04202
Length = 293
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 662 KRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKV 721
+RV+G LLG G +D+ NS+AVP +E +V D DY NM KVN++E +
Sbjct: 50 ERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETI 106
Query: 722 VGWYHTGPKLHQNDIQINELIRRYCTNSVLVIID 755
VGWY TG ++ I++ R N + + +D
Sbjct: 107 VGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVD 140
>MGI|MGI:1913335 [details] [associations]
symbol:Eif3f "eukaryotic translation initiation factor 3,
subunit F" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913335 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 EMBL:CH466531 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
HOGENOM:HOG000241154 MEROPS:M67.974 CTD:8665 HOVERGEN:HBG107843
OrthoDB:EOG44XJHN EMBL:AK002778 EMBL:BC083190 IPI:IPI00120914
RefSeq:NP_079620.2 UniGene:Mm.182962 ProteinModelPortal:Q9DCH4
SMR:Q9DCH4 DIP:DIP-42766N IntAct:Q9DCH4 MINT:MINT-1899046
STRING:Q9DCH4 PhosphoSite:Q9DCH4 PaxDb:Q9DCH4 PRIDE:Q9DCH4
Ensembl:ENSMUST00000033342 GeneID:66085 KEGG:mmu:66085
InParanoid:Q5XJV3 ChiTaRS:EIF3F NextBio:320584 Bgee:Q9DCH4
Genevestigator:Q9DCH4 GermOnline:ENSMUSG00000031029 Uniprot:Q9DCH4
Length = 361
Score = 155 (59.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D + R ++ RV+G LLG K ++V+N F+VP +E + + +V D ++ +NMY
Sbjct: 108 DSYERRNE--GAARVIGTLLGT-VDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMY 161
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
+ KKV+ E ++GWY TG + ++ + I+E R N + + +D + + +AY
Sbjct: 162 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQHGRMSIKAY 220
>DICTYBASE|DDB_G0293254 [details] [associations]
symbol:eif3F "eukaryotic translation initiation
factor 3 (eIF3) subunit 5" species:44689 "Dictyostelium discoideum"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
dictyBase:DDB_G0293254 GenomeReviews:CM000155_GR EMBL:AAFI02000200
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
RefSeq:XP_629217.1 ProteinModelPortal:Q54C49 STRING:Q54C49
PRIDE:Q54C49 EnsemblProtists:DDB0233924 GeneID:8629099
KEGG:ddi:DDB_G0293254 ProtClustDB:CLSZ2429292 Uniprot:Q54C49
Length = 284
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
DH+ R + +G Q RV+G LLG + G+L++ N F V E ++ ++ +Y M
Sbjct: 27 DHYIRRN-VG-QDRVIGTLLG-FNNDGVLEIRNCFPVVHSETEQIA----VEMEYQRKML 79
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNS 749
+ K + RE ++GWY TG +++N + IN R NS
Sbjct: 80 DLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNS 119
>POMBASE|SPBC4C3.07 [details] [associations]
symbol:SPBC4C3.07 "translation initiation factor eIF3f"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071540 "eukaryotic
translation initiation factor 3 complex, eIF3e" evidence=IDA]
[GO:0071541 "eukaryotic translation initiation factor 3 complex,
eIF3m" evidence=IDA] [GO:0003743 "translation initiation factor
activity" evidence=IC] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPBC4C3.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003743
eggNOG:COG1310 GO:GO:0004843 GO:GO:0002183 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005 GO:GO:0016282
GO:GO:0071540 GO:GO:0071541 HOGENOM:HOG000241154 OrthoDB:EOG4RZ28G
PIR:T40490 RefSeq:NP_596298.1 ProteinModelPortal:O43060
STRING:O43060 EnsemblFungi:SPBC4C3.07.1 GeneID:2540868
KEGG:spo:SPBC4C3.07 NextBio:20801984 Uniprot:O43060
Length = 302
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGI-LDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH R S+ N +RV+G LLG G +++ + FAVP +E + V + +Y M
Sbjct: 35 DHSTRKSE--NNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQVEV---EMEYHRAM 89
Query: 709 YGMFKKVNAREKVVGWYHTGPKL 731
Y + K N RE VVGWY T P L
Sbjct: 90 YHLHLKANPREVVVGWYATSPDL 112
>DICTYBASE|DDB_G0293180 [details] [associations]
symbol:csn6 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IEA;IDA] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0293180 GO:GO:0045335
GenomeReviews:CM000155_GR GO:GO:0008180 eggNOG:COG1310
EMBL:AAFI02000199 KO:K12179 OMA:IGKQKGR InterPro:IPR024969
Pfam:PF13012 EMBL:DQ309434 RefSeq:XP_629327.1
ProteinModelPortal:Q54C92 STRING:Q54C92 PRIDE:Q54C92
EnsemblProtists:DDB0233105 GeneID:8629051 KEGG:ddi:DDB_G0293180
ProtClustDB:CLSZ2429325 Uniprot:Q54C92
Length = 309
Score = 135 (52.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 650 DHFNRMSKIGNQK---RVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLE 706
DHF R N + RV+GV+LG G+ + ++ NSF + + DK LD +YL
Sbjct: 40 DHFTRTKVQSNYQDNCRVIGVILGVQNGRNV-EICNSFEMVYATVDKQ---LVLDIEYLR 95
Query: 707 NMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDA-KPKELGLPT 765
Y +++ ++GWY TG ++ ++DI +++ I + + + +++D PK LP
Sbjct: 96 KKY---EQLFPLYDLLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPV 152
Query: 766 EAY 768
Y
Sbjct: 153 IIY 155
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 534 TNRDAEKKEITKSKVEDKPQEDKKPEIKVNI 564
T DA K + KS + D P + +NI
Sbjct: 8 TTTDANKLVLEKSANSSGLEVDLHPLVLINI 38
>ZFIN|ZDB-GENE-050417-289 [details] [associations]
symbol:cops6 "COP9 constitutive photomorphogenic
homolog subunit 6 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0060026 "convergent
extension" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021551 "central nervous system morphogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-050417-289 GO:GO:0007420 GO:GO:0009953 GO:GO:0060026
GO:GO:0021551 KO:K12179 InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 EMBL:BC093188 IPI:IPI00570094
RefSeq:NP_001017768.1 UniGene:Dr.42675 ProteinModelPortal:Q567F8
PRIDE:Q567F8 GeneID:550465 KEGG:dre:550465 NextBio:20879709
Uniprot:Q567F8
Length = 297
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/125 (28%), Positives = 64/125 (51%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ R+ S+ G +VVG L+G +G+ I +V NSF + F ++ + +D +Y
Sbjct: 23 DHWIRIRSQEGRAVQVVGALIGKQEGRNI-EVMNSFELLFHT--VEDQI-HIDKEYYYTK 78
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG Q+DI I++ + + + + ++ K LP +
Sbjct: 79 EEQFKQVFKEMEFLGWYTTGGSPDQSDIHIHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 138
Query: 769 R-VVD 772
V+D
Sbjct: 139 ESVID 143
>FB|FBgn0033069 [details] [associations]
symbol:CG8335 species:7227 "Drosophila melanogaster"
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE013599
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 HAMAP:MF_03005 RefSeq:NP_610210.2
ProteinModelPortal:A1Z6K7 SMR:A1Z6K7 IntAct:A1Z6K7 STRING:A1Z6K7
GeneID:35547 KEGG:dme:Dmel_CG8335 UCSC:CG8335-RA
FlyBase:FBgn0033069 InParanoid:A1Z6K7 OMA:ITLSTMI OrthoDB:EOG41G1M1
GenomeRNAi:35547 NextBio:793971 Bgee:A1Z6K7 Uniprot:A1Z6K7
Length = 285
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 650 DHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMY 709
D ++R K NQ V+G LLG K +G ++++N F VP E ++ + LD Y +
Sbjct: 23 DAYDRRPKGDNQ--VMGTLLGRNK-EGHIEITNCFTVPHKEHSENKRI-DLDMAYASEVL 78
Query: 710 GMFKKVNAREKVVGWYHTGPKLHQNDIQINEL-IRRYCTNSVL-VIIDAKPKELGLPTEA 767
+ E+V+GW+ TG + ++ I++ +R C L +++DA K L T
Sbjct: 79 ELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRL 138
Query: 768 YRVVD 772
Y V+
Sbjct: 139 YCAVE 143
>POMBASE|SPAC31G5.13 [details] [associations]
symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IC] [GO:0046898 "response to
cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
NextBio:20804070 GO:GO:0071947 Uniprot:P41878
Length = 308
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 39/147 (26%), Positives = 69/147 (46%)
Query: 654 RMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFK 713
R + G V+G++LG + + V + FA+P + SV +D + +NM M K
Sbjct: 42 RHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMP--QSGTGVSVEAVDPVFQKNMMDMLK 99
Query: 714 KVNAREKVVGWYHTGPK----LHQNDIQINELIRRYCTNSVLVIIDAKPKELG-LPTEAY 768
+ E VVGWYH+ P L DI + + +V V++D G + +A+
Sbjct: 100 QTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAF 159
Query: 769 RVVDEDKIRPEREPNPRPSANKAAIGK 795
R+++ + +EP + ++N I K
Sbjct: 160 RLINPSTLMMGQEPR-QTTSNLGHINK 185
>TAIR|locus:2171696 [details] [associations]
symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
Uniprot:Q9LT08
Length = 308
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 657 KIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVN 716
+ G V+G++LG + + + V + FA+P + SV +DH + NM M K+
Sbjct: 45 RAGVPMEVMGLMLGEFVDEYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTG 102
Query: 717 AREKVVGWYHTGPK----LHQNDIQINELIRRYCTNSVLVIIDAKPKELG-LPTEAYRVV 771
E VVGWYH+ P L DI + +V V++D G + +A+R +
Sbjct: 103 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSI 162
Query: 772 DEDKIRPEREPNPRPSANKAAIGK 795
+ I +EP + ++N + K
Sbjct: 163 NPQTIMLGQEPR-QTTSNLGHLNK 185
>UNIPROTKB|A7TX81 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 GO:GO:0008180 KO:K12179
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
EMBL:EF468513 RefSeq:NP_001098769.1 UniGene:Ssc.8359
ProteinModelPortal:A7TX81 GeneID:100125954 KEGG:ssc:100125954
Uniprot:A7TX81
Length = 323
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + ++ + +D +Y
Sbjct: 49 DHWIRMRSQEGRPMQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 104
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 105 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 164
Query: 769 R-VVD 772
V+D
Sbjct: 165 ESVID 169
>UNIPROTKB|F1MG10 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9913 "Bos taurus" [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008180
GO:GO:0010388 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012
IPI:IPI00867272 UniGene:Bt.52796 GeneTree:ENSGT00530000063075
EMBL:DAAA02058286 PRIDE:F1MG10 Ensembl:ENSBTAT00000003725
Uniprot:F1MG10
Length = 324
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + ++ + +D +Y
Sbjct: 50 DHWIRMRSQEGRPMQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 105
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 106 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 165
Query: 769 R-VVD 772
V+D
Sbjct: 166 ESVID 170
>MGI|MGI:1349439 [details] [associations]
symbol:Cops6 "COP9 (constitutive photomorphogenic) homolog,
subunit 6 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349439 GO:GO:0005737 GO:GO:0008180 eggNOG:COG1310
GO:GO:0010388 HOGENOM:HOG000253002 KO:K12179 OMA:IGKQKGR
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:AF071315 EMBL:BC004664
EMBL:BC014286 IPI:IPI00131873 RefSeq:NP_036132.1 UniGene:Mm.3981
ProteinModelPortal:O88545 SMR:O88545 STRING:O88545
PhosphoSite:O88545 PaxDb:O88545 PRIDE:O88545
Ensembl:ENSMUST00000019638 GeneID:26893 KEGG:mmu:26893
InParanoid:O88545 NextBio:304723 Bgee:O88545 Genevestigator:O88545
GermOnline:ENSMUSG00000019494 Uniprot:O88545
Length = 324
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + ++ + +D +Y
Sbjct: 50 DHWIRMRSQEGRPMQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 105
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 106 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 165
Query: 769 R-VVD 772
V+D
Sbjct: 166 ESVID 170
>RGD|1309919 [details] [associations]
symbol:Cops6 "COP9 signalosome subunit 6" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0008180
"signalosome" evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1309919
GO:GO:0008180 GO:GO:0010388 KO:K12179 InterPro:IPR024969
Pfam:PF13012 CTD:10980 OrthoDB:EOG4JDH76
GeneTree:ENSGT00530000063075 EMBL:CH474107 IPI:IPI00870712
RefSeq:NP_001100599.1 UniGene:Rn.35643 Ensembl:ENSRNOT00000001820
GeneID:304343 KEGG:rno:304343 UCSC:RGD:1309919 NextBio:652918
Uniprot:D3ZI16
Length = 344
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + +K +D +Y
Sbjct: 70 DHWIRMRSQEGRPMQVIGALIGKQEGRNI-EVMNSFELLSHTVEKKI---IIDKEYYYTK 125
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 126 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 185
Query: 769 R-VVD 772
V+D
Sbjct: 186 ESVID 190
>UNIPROTKB|E7EM64 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005634 InterPro:IPR024969
Pfam:PF13012 HGNC:HGNC:21749 ChiTaRS:COPS6 EMBL:AC073842
IPI:IPI00924791 ProteinModelPortal:E7EM64 SMR:E7EM64
Ensembl:ENST00000418625 ArrayExpress:E7EM64 Bgee:E7EM64
Uniprot:E7EM64
Length = 326
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + ++ + +D +Y
Sbjct: 52 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 107
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 108 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 167
Query: 769 R-VVD 772
V+D
Sbjct: 168 ESVID 172
>UNIPROTKB|Q7L5N1 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008180 "signalosome"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 GO:GO:0019048 EMBL:CH236956 EMBL:CH471091
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000253002
KO:K12179 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:BC002520
EMBL:U70735 IPI:IPI00163230 RefSeq:NP_006824.2 UniGene:Hs.15591
ProteinModelPortal:Q7L5N1 SMR:Q7L5N1 DIP:DIP-32655N IntAct:Q7L5N1
MINT:MINT-5005311 STRING:Q7L5N1 PhosphoSite:Q7L5N1 DMDM:55976470
PaxDb:Q7L5N1 PeptideAtlas:Q7L5N1 PRIDE:Q7L5N1 DNASU:10980
Ensembl:ENST00000303904 GeneID:10980 KEGG:hsa:10980 UCSC:uc003usu.3
GeneCards:GC07P099686 HGNC:HGNC:21749 HPA:HPA044315 MIM:614729
neXtProt:NX_Q7L5N1 PharmGKB:PA134919933 InParanoid:Q7L5N1
PhylomeDB:Q7L5N1 ChiTaRS:COPS6 GenomeRNAi:10980 NextBio:41718
ArrayExpress:Q7L5N1 Bgee:Q7L5N1 CleanEx:HS_COPS6
Genevestigator:Q7L5N1 GermOnline:ENSG00000168090 Uniprot:Q7L5N1
Length = 327
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 650 DHFNRM-SKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENM 708
DH+ RM S+ G +V+G L+G +G+ I +V NSF + ++ + +D +Y
Sbjct: 53 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 108
Query: 709 YGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAY 768
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 109 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 168
Query: 769 R-VVD 772
V+D
Sbjct: 169 ESVID 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1061 968 0.00096 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 632 (67 KB)
Total size of DFA: 489 KB (2227 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 78.66u 0.09s 78.75t Elapsed: 00:00:33
Total cpu time: 78.67u 0.09s 78.76t Elapsed: 00:00:36
Start: Thu Aug 15 14:25:25 2013 End: Thu Aug 15 14:26:01 2013