BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17832
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
ST+F I D +F+ +V + TPV+VDF A+WC PCK++ P LE +V + +GKV +AKVD+
Sbjct: 59 STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDI 118
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
D TDLA++Y+VS+VP ++ MK+G D+FVG + + +LEAF+
Sbjct: 119 DDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDED--QLEAFL 161
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 57 TSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVD 116
T+F I D +F+ +V + TPV+VDF A+WC PCK++ P LE +V + +GKV +AKVD+D
Sbjct: 60 TTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
Query: 117 LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
TDLA++Y+VS+VP ++ MK+G D+FVG + ++LEAF+
Sbjct: 120 DHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDE--DQLEAFL 161
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
ST+F + D +F+ +V + TPV+VDF A+WC PCK++ P LE +V + +GKV +AKVD+
Sbjct: 59 STTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDI 118
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
D TDLA++Y+VS+VP ++ +K+G D+FVG + ++LEAF+
Sbjct: 119 DDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDE--DQLEAFL 161
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 57 TSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVD 116
T+F + D +F+ +V + TPV+VDF A+WC PCK++ P LE +V + +GKV +AKVD+D
Sbjct: 60 TTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
Query: 117 LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
TDLA++Y+VS+VP ++ +K+G D+FVG + ++LEAF+
Sbjct: 120 DHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDE--DQLEAFL 161
>sp|Q17424|THIO2_CAEEL Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=3 SV=2
Length = 145
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
++ F I ++F KV Q+S PVIVDF A+WC PC+ + P LE V G V LAK++V
Sbjct: 37 ASVFDIDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINV 96
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTN 162
D +LAMDY +S+VP + K+G + F G E+L+ F+ +
Sbjct: 97 DHAGELAMDYGISAVPTVFAFKNGEKISGFSGVLDD--EQLDDFIED 141
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 62 TDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
D F++ V Q+S PV+VDF+A+WC PCK++AP L+ I M G+V++AKV++D +L
Sbjct: 5 VDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPEL 64
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVG 147
A + V S+P L+ KDG VG
Sbjct: 65 AAQFGVRSIPTLLMFKDGELAANMVG 90
>sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRX-X PE=2 SV=1
Length = 180
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
+ + Q EFEA+V Q+ PV+VDF A WC PC+L+AP ++ E G++++ K+D
Sbjct: 66 GAAVRFIGQSEFEAEVLQSDLPVLVDFVADWCGPCRLIAPVVDWAAEEYEGRLKIVKIDH 125
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGRE 141
D L +Y+V +P LI KDG+E
Sbjct: 126 DANPQLIEEYKVYGLPSLILFKDGKE 151
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 39 ATNTTPTGNKTPPAEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLE 98
+T+TT A+ + ++TD F A V ++ PV+VDF+A WC PCK++AP LE
Sbjct: 332 STDTTDWSTAMTDAKNAGVTIEVTDASFF-ADVLSSNKPVLVDFWATWCGPCKMVAPVLE 390
Query: 99 AIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVG 147
I ++ +AK+DVD ++A ++QV S+P +I + G+ R VG
Sbjct: 391 EIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVG 439
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++K++ +VDF+A WC PCK++AP LE + +GK + K+DVD
Sbjct: 5 KVTDS-DFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEV 99
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++K++ +VDF+A WC PCK++AP LE + +GK + K+DVD
Sbjct: 5 KVTDS-DFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEV 99
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q6GHU0|THIO_STAAR Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3
SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|P99122|THIO_STAAN Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1
SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|P0A0K4|THIO_STAAM Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=trxA PE=1 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q5HGT9|THIO_STAAC Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q2YXD0|THIO_STAAB Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=trxA PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q2FZD2|THIO_STAA8 Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA
PE=2 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|Q2FHT6|THIO_STAA3 Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3
SV=1
Length = 104
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++TD +F++KV+ +VDF+A WC PCK++AP LE + GK + K+DVD
Sbjct: 5 KVTDA-DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y+V S+P LI KDG+ D+ VGFQ K NL E+
Sbjct: 62 STAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEV 99
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + ++TD F V ++ PV+VDF+A WC PCK++AP LE I + +AK+DV
Sbjct: 7 SATIKVTDA-SFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDV 65
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGF--QKSNLEELEAFVTN 162
D + A ++QV S+P LI KDG+ R VG + + L EL V N
Sbjct: 66 DTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 114
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + ++TD F V ++ PV+VDF+A WC PCK++AP LE I + +AK+DV
Sbjct: 7 SATIKVTDA-SFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDV 65
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGF--QKSNLEELEAFVTN 162
D + A ++QV S+P LI KDG+ R VG + + L EL V N
Sbjct: 66 DTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 114
>sp|P07887|THIO2_CORNE Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3
Length = 108
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%)
Query: 62 TDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
T + F+A V A TPV+VDF+A WC PCK +AP LE + GKV++ KVDV D
Sbjct: 8 TTDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDT 67
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVG 147
A+ Y + ++P L+ KDG + VG
Sbjct: 68 AVKYNIRNIPALLMFKDGEVVAQQVG 93
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
F+ ++++ PV+VDF+A WC PC+ M P L+ + E++ K+Q+ K+D + T +A YQ
Sbjct: 69 FDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEKLGDKIQVVKIDTEKYTSIANRYQ 128
Query: 127 VSSVPVLIRMKDGREQDRFVGFQKSN 152
+ ++P I K+G+ RF G +N
Sbjct: 129 IEALPTFIIFKNGKPCHRFEGALPAN 154
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 59/86 (68%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
F+ +V ++ PV+VDF+A+WC PCK++ P ++ I + + GKV++ K+++D ++ +Y
Sbjct: 10 FKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNIPSEYG 69
Query: 127 VSSVPVLIRMKDGREQDRFVGFQKSN 152
+ S+P ++ K+G ++D +G Q+ N
Sbjct: 70 IRSIPTIMLFKNGEQKDTKIGLQQKN 95
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + +TD F V +S PV+VDF+A WC PCK++AP LE I ++ +AK+DV
Sbjct: 5 SATVAVTDD-SFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDV 63
Query: 116 DLMTD--LAMDYQVSSVPVLIRMKDGREQDRFVG 147
D+ + A D+QV S+P +I KDG R VG
Sbjct: 64 DVDANPATARDFQVVSIPTMILFKDGAPVKRIVG 97
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
F+ ++ + PV+VDF+A WC PC+LM P L + E + + + K+D + LA YQ
Sbjct: 68 FDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQ 127
Query: 127 VSSVPVLIRMKDGREQDRFVG 147
+ ++P I KDG+ DRF G
Sbjct: 128 IEALPTFILFKDGKLWDRFEG 148
>sp|Q6XHI1|THIO2_DROYA Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1
Length = 106
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 59 FQITDQKEFEAKVKQASTPVIV-DFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDL 117
+QI D+ + ++ +AS ++V DFFA WC PCK+++P L + + V + KVDVD
Sbjct: 3 YQIKDKADLNGQLTKASGKLVVLDFFATWCGPCKMISPKLAELSTQYADTVVVLKVDVDE 62
Query: 118 MTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
D+AM+Y +SS+P + +K+G + + F G LE++
Sbjct: 63 CEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAQRLEDV 101
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 79 IVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKD 138
+VDF+A WC PCK++AP LE + +GK + K+DVD A ++V S+P LI KD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPSTAAKFEVMSIPTLIVFKD 80
Query: 139 GREQDRFVGFQ-KSNLEEL 156
G D+ VGFQ K NL E+
Sbjct: 81 GEPVDKVVGFQPKENLAEV 99
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 58/86 (67%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
F+ +V ++ PV+VDF+A+WC PCK++ P ++ I + + GKV++ K+++D + +Y
Sbjct: 10 FKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEYG 69
Query: 127 VSSVPVLIRMKDGREQDRFVGFQKSN 152
+ S+P ++ K+G ++D +G Q+ N
Sbjct: 70 IRSIPTIMLFKNGEQKDTKIGLQQKN 95
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 61 ITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTD 120
+TD K FE +V ++ PV+VDF+A+WC PC+++ P +E I + + KV++ K+++D +
Sbjct: 5 VTD-KSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPE 63
Query: 121 LAMDYQVSSVPVLIRMKDGREQDRFVGFQKSN 152
+ Y + S+P ++ K+G ++D VG + N
Sbjct: 64 IPSKYGIRSIPTVMLFKNGEQKDTKVGLHQKN 95
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 66 EFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDY 125
+F KV ++ TPV+VDF+A WC PC+++AP L+ + G++ +AKV+ D A
Sbjct: 11 DFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYASQL 70
Query: 126 QVSSVPVLIRMKDGREQDRFVG 147
+ +P L+ KDGRE R VG
Sbjct: 71 GIQGIPTLVIFKDGREVGRLVG 92
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
Q+ Q+ F + AS V++DFFA+WC PCK++ P LEA+ + V + KVD+D
Sbjct: 3 QVVSQENFADSI--ASGLVLIDFFAEWCGPCKMLTPVLEALAAELP-HVTILKVDIDSSP 59
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQ 149
A Y VSS+P LI KDG+E +R VG +
Sbjct: 60 RPAEQYSVSSIPTLILFKDGKEVERSVGLK 89
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 63 DQKEFEA---KVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++ EF+A K K+A VI+DF A WC PC+ +AP ++ G V L KVDVD +
Sbjct: 13 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL-KVDVDELK 71
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLE 154
++A Y V ++P + +KDG E D+ VG +K +L+
Sbjct: 72 EVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQ 106
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 63 DQKEFEA---KVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
++ EF+A K K+A VI+DF A WC PC+ +AP ++ G V L KVDVD +
Sbjct: 13 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL-KVDVDELK 71
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLE 154
++A Y V ++P + +KDG E D+ VG +K +L+
Sbjct: 72 EVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQ 106
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 79 IVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKD 138
+VDF+A WC PCK++AP LE + +GK + K+DVD A ++V S+P LI KD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKD 80
Query: 139 GREQDRFVGFQ-KSNLEEL 156
G D+ VGFQ K NL E+
Sbjct: 81 GEPVDKVVGFQPKENLAEV 99
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 38 TATNTTPTGNKTPPAEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCL 97
+ + T G ++ P+ S Q F ++K+++ ++VDF A WC PC+++ P +
Sbjct: 11 SGEDATAAGTESEPSRVLKFSSSARWQLHFN-EIKESNKLLVVDFSASWCGPCRMIEPAI 69
Query: 98 EAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEE 155
A+ ++ N V K+DVD + D+A ++ V+++P + +K G+E +R +G +K LE+
Sbjct: 70 HAMADKFN-DVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEK 126
>sp|O83889|THIO_TREPA Thioredoxin OS=Treponema pallidum (strain Nichols) GN=trxA PE=3
SV=1
Length = 105
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 78 VIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMK 137
VIVDF+A WC CK++ P LE + + V + K++VD DLA+++ V+S+P LI K
Sbjct: 21 VIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFK 80
Query: 138 DGREQDRFVGF 148
DG+E DR +GF
Sbjct: 81 DGKEVDRSIGF 91
>sp|Q6NPF9|TRXY1_ARATH Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760
PE=2 SV=1
Length = 172
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
FE + + PV+VD++A WC PC+ M P L + E + K+Q+ K+D + +A Y+
Sbjct: 73 FEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYK 132
Query: 127 VSSVPVLIRMKDGREQDRFVG 147
+ ++P I KDG DRF G
Sbjct: 133 IEALPTFILFKDGEPCDRFEG 153
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + Q+TD F+ +V + PV+VDF+A WC PC+++AP ++ I ++ GK+++ KV+
Sbjct: 2 SAAAQVTD-STFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNT 60
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVG 147
D +A Y + S+P L+ K G++ D VG
Sbjct: 61 DENPQVASQYGIRSIPTLMIFKGGQKVDMVVG 92
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + Q+TD F+ +V + PV+VDF+A WC PC+++AP ++ I ++ GK+++ KV+
Sbjct: 2 SAAAQVTD-STFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNT 60
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVG 147
D +A Y + S+P L+ K G++ D VG
Sbjct: 61 DENPQVASQYGIRSIPTLMIFKGGQKVDMVVG 92
>sp|P80579|THIO_ALIAC Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1
Length = 105
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 73 QASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPV 132
Q PV+VDF+A WC PC++MAP LE E KV +AK++VD + + + S+P
Sbjct: 15 QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 74
Query: 133 LIRMKDGREQDRFVGFQKSNLEELEA 158
LI K GR + +G+Q E+LEA
Sbjct: 75 LILFKGGRPVKQLIGYQPK--EQLEA 98
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
Q+ E+++ + V+VDFFA WC PCK++AP +E E+ + K+DVD ++
Sbjct: 4 QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYS-DAAFYKLDVDEVS 62
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVG 147
D+A +VSS+P LI K G+E R VG
Sbjct: 63 DVAQKAEVSSMPTLIFYKGGKEVTRVVG 90
>sp|Q9V429|THIO2_DROME Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2
Length = 114
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIV-DFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVD 114
ST+ Q + + ++ +AS ++V DFFA WC PCK+++P L + + V + KVD
Sbjct: 8 STNLHFHLQADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVD 67
Query: 115 VDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
VD D+AM+Y +SS+P + +K+G + + F G LE++
Sbjct: 68 VDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDV 109
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 56 STSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV 115
S + +TD F+ +V ++S PV+VDF+A WC PC+++AP ++ I ++ + +V++ KV+
Sbjct: 2 SVAAAVTD-ATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNT 60
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVG 147
D +A Y + S+P L+ KDG+ D VG
Sbjct: 61 DENPSVASQYGIRSIPTLMIFKDGQRVDTVVG 92
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
QI Q F + AS V+VDFFA+WC PCK++ P LEA+ + V + K+D+D
Sbjct: 3 QIVSQDNFADSI--ASGLVLVDFFAEWCGPCKMLTPVLEALAAELP-YVTILKLDIDASP 59
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSN 152
A + VSS+P LI KDG+E +R VG + +
Sbjct: 60 RPAEQFGVSSIPTLILFKDGKEVERSVGLKDKD 92
>sp|P14949|THIO_BACSU Thioredoxin OS=Bacillus subtilis (strain 168) GN=trxA PE=1 SV=3
Length = 104
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 62 TDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
TDQ F A+ + V+ DF+A WC PCK++AP LE + + M K+++ K+DVD +
Sbjct: 7 TDQS-FSAETSEGV--VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQET 63
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVGFQ-KSNLEEL 156
A Y V S+P L+ +KDG + VGF+ K L+EL
Sbjct: 64 AGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQEL 99
>sp|P52232|THIO1_SYNY3 Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0233 PE=3 SV=1
Length = 105
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 77 PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRM 136
PV+VDF+A WC PC++MAP LE + + ++Q+ K+D D +A YQ+ S+P L+
Sbjct: 20 PVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLF 79
Query: 137 KDGREQDRFVG 147
K G+ R G
Sbjct: 80 KQGQPVHRMEG 90
>sp|P52227|THIO_CHLCV Thioredoxin OS=Chlamydophila caviae (strain GPIC) GN=trxA PE=3 SV=1
Length = 102
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 74 ASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVL 133
A+ V++DFFA+WC PCK++ P LE++ E V + KV++D A Y VSS+P L
Sbjct: 15 ATGLVLIDFFAEWCGPCKMLTPVLESL-EAEVSSVLIGKVNIDDHPAPAEQYGVSSIPTL 73
Query: 134 IRMKDGREQDRFVGFQ 149
I KDG+E DR VG +
Sbjct: 74 ILFKDGKEVDRVVGLK 89
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 62 TDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
+ KEF V ++ PV+VDF+A WC PCKL+AP ++ + + +GK+ + K++ D +
Sbjct: 82 SSWKEF---VLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 138
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVG 147
A Y + S+P ++ K+G ++ +G
Sbjct: 139 ATQYNIRSIPTVLFFKNGERKESIIG 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.124 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,994,673
Number of Sequences: 539616
Number of extensions: 2611746
Number of successful extensions: 8918
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 8327
Number of HSP's gapped (non-prelim): 568
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)