RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17832
(189 letters)
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 75.7 bits (185), Expect = 8e-19
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 52 AEAPSTSFQITDQKEFEAKVKQAS-TPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQL 110
A A + +Q+ D+ + + ++ +AS V++DFFA WC PCK+++P L + + V +
Sbjct: 1 AAAAAMVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVV 60
Query: 111 AKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
KVDVD D+AM+Y +SS+P + +K+G + + F G LE++
Sbjct: 61 LKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDV 106
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 75.2 bits (184), Expect = 1e-18
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
+TD F+ V +A ++VDF+A+WC PCK++AP L+ I + GK+ +AK+++D
Sbjct: 6 HLTDD-SFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
A Y + +P L+ K+G VG + +L+ F+
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGAL--SKGQLKEFL 103
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 74.1 bits (181), Expect = 3e-18
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
ITD EFE++V +A PV+V F+A WC PC+LM+P + + ++++ K+++D
Sbjct: 6 TITDA-EFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP 64
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
Y+V VP L +K + D G + ++L +F+
Sbjct: 65 TTVKKYKVEGVPALRLVKGEQILDSTEGVI--SKDKLLSFL 103
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 75.1 bits (184), Expect = 1e-17
Identities = 15/109 (13%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 59 FQITDQKEFEAKVKQAS--TPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVD 116
+++ ++F +++ T ++V+ + C + LE + + K+
Sbjct: 102 YELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMV-KFCKIRAS 160
Query: 117 LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKS-----NLEELEAFV 160
T + +P L+ K G F+ + ++E+F+
Sbjct: 161 -NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFL 208
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 72.1 bits (176), Expect = 2e-17
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
+TD F+ ++ PV+VDF+A WC PC++MAP LE E KV +AK++VD
Sbjct: 4 TLTDA-NFQQAIQG-DKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNA 163
+ + + S+P LI K G + +G+Q E+LEA + +
Sbjct: 62 ETTSQFGIMSIPTLILFKGGEPVKQLIGYQ--PKEQLEAQLADV 103
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 71.9 bits (176), Expect = 3e-17
Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 56 STSFQITDQKEFEAKVKQAST-PVIVDFFAKWCDPCKLMAPCLEAIVERMNG-KVQLAKV 113
+ +Q + + +K+ +++ + + ++ Q+A
Sbjct: 10 TRGWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVA 69
Query: 114 DVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
D++ + + V P + DG+ + G EL +
Sbjct: 70 DLEQSEAIGDRFNVRRFPATLVFTDGKLRGALSGIH--PWAELLTLM 114
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 70.5 bits (172), Expect = 6e-17
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 60 QITDQKEFEAKVKQAS-TPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLM 118
QI + F+ + A V+VDF A WC PCK++ P + V +VDVD
Sbjct: 4 QIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFH-SLSEKYSNVIFLEVDVDDC 62
Query: 119 TDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
D+A + +V +P K G++ F G K E+LEA +
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQKVGEFSGANK---EKLEATI 101
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 68.0 bits (165), Expect = 6e-16
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
+ D F+ V ++S PV+VDF+A WC PC+++AP ++ I K++ K++ D
Sbjct: 5 AVNDD-TFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP 63
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
++A +Y + S+P ++ K G++ + +G + V
Sbjct: 64 NVASEYGIRSIPTIMVFKGGKKCETIIGAV--PKATIVQTV 102
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 67.9 bits (165), Expect = 6e-16
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 60 QITDQKEFEAKVKQAST-PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLM 118
+ +F+ ++ A + +V F + C PC +AP ++ + V +VDV
Sbjct: 5 PVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVF-LEVDVHQC 63
Query: 119 TDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
A +S+ P ++ D++ G LEE
Sbjct: 64 QGTAATNNISATPTFQFFRNKVRIDQYQGADAVGLEEK 101
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 67.9 bits (165), Expect = 8e-16
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 60 QITDQKEFEAKVKQAST---PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVD 116
I + ++A++ + P++VDF A WC PCK++AP E + GKV KVDVD
Sbjct: 6 VIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD 65
Query: 117 LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
+ +A ++++P KDG + D VG + L+ L
Sbjct: 66 AVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKAL 105
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 65.2 bits (158), Expect = 9e-15
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 63 DQKEFEAKVKQAST-PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
++ F VK A PV++D F +WC PCK MAP E + E + L L
Sbjct: 12 NKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTL 71
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEE 155
A + + VP +K+ G + L E
Sbjct: 72 AKELGIRVVPTFKILKENSVVGEVTGAKYDKLLE 105
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 64.0 bits (155), Expect = 4e-14
Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 60 QITDQKEFEAKVKQAST-PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLM 118
+ + + + + V++ F W C M L +I E++ + VD+ +
Sbjct: 6 HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEV 65
Query: 119 TDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSN-----LEELEAFVTNAE 164
D Y++ ++ + +G +N +E+ + V E
Sbjct: 66 PDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIE 116
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 63.0 bits (152), Expect = 5e-14
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMT 119
+ D ++ V ++ PV+VDF+A WC PCKL+AP ++ + + +GK+ + K++ D
Sbjct: 3 DVNDS-SWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP 61
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
+A Y + S+P ++ K+G ++ +G L +
Sbjct: 62 GIATQYNIRSIPTVLFFKNGERKESIIGAV--PKSTLTDSI 100
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 62.5 bits (151), Expect = 1e-13
Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 15/112 (13%)
Query: 60 QITDQKEFEAKVKQAST-PVIVDFFA-------KWCDPCKLMAPCLEAIVERMNGKVQLA 111
++ +EF V+Q + + F WC C P + ++ ++
Sbjct: 5 SVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFI 64
Query: 112 KVDVD-------LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
V D + +V++VP L++ ++ Q + +E L
Sbjct: 65 YCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKLVESECLQANLVEML 116
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 62.2 bits (150), Expect = 1e-13
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 52 AEAPSTSFQITDQKEFEAKVKQAS---TPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKV 108
A + + ++++A+ T V+VDF A WC PC+ +AP + + V
Sbjct: 2 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFA-DLAKKLPNV 60
Query: 109 QLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
KVD D + +A D+ + ++P + +K+G+ D+ VG +K L+
Sbjct: 61 LFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQST 108
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 61.8 bits (149), Expect = 1e-13
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 61 ITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTD 120
+T Q EF++ + Q + VIVDFFA+WC PCK +AP E + V KVDVD +++
Sbjct: 5 VTSQAEFDSIISQ-NELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMV-FIKVDVDEVSE 62
Query: 121 LAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
+ ++S+P K+G D +G S L++L
Sbjct: 63 VTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQL 98
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 62.4 bits (151), Expect = 2e-13
Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 4/112 (3%)
Query: 59 FQITDQKEFEAKVKQA-STPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKV-QLAKVDVD 116
+ + + + QA V++ K + ++ Q+A D++
Sbjct: 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLE 78
Query: 117 LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKPAE 168
+ + V P + G + G EL + +P +
Sbjct: 79 QSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIH--PWAELINLMRGLVEPQQ 128
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 59.4 bits (143), Expect = 1e-12
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 65 KEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMD 124
KE K K + ++VDF A WC PCK++AP + + V KVDVD + +A +
Sbjct: 16 KEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFA-ELAKKFPNVTFLKVDVDELKAVAEE 74
Query: 125 YQVSSVPVLIRMKDGREQDRFVGFQKSNLEEL 156
+ V ++P I +KDG+ D+ VG K L L
Sbjct: 75 WNVEAMPTFIFLKDGKLVDKTVGADKDGLPTL 106
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 57.5 bits (138), Expect = 8e-12
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 52 AEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLA 111
A PS + ++F + + + F A WC PCK + V+ A
Sbjct: 5 ARYPSV-VDVYSVEQFRNIMSE-DILTVAWFTAVWCGPCK-TIERPMEKIAYEFPTVKFA 61
Query: 112 KVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEE-LEAFVTN 162
KVD D +++ +V +P I + G+ +G L + L + +
Sbjct: 62 KVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKLRDIIKD 113
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 57.2 bits (137), Expect = 9e-12
Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 7/106 (6%)
Query: 59 FQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLM 118
++T + + + K C C+ A L +V + +
Sbjct: 11 LEVTTVVRAQEALDK-KETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQ 69
Query: 119 T----DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
Y + +VP + + DG+ R + +E++ F
Sbjct: 70 LNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSM--SAQEIKDFA 113
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 56.8 bits (136), Expect = 1e-11
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 65 KEFEAKVKQASTPV-IVDFFAKWCDPCKLMAPCLEAIVER----MNGKVQLAKVDVDLMT 119
E + ++ V I+ F C C L GK+ V+
Sbjct: 4 DETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP 63
Query: 120 DLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNA 163
+ A Y V +VP ++ +G ++ F G + + +A
Sbjct: 64 EWADQYNVMAVPKIVIQVNGEDRVEFEGAY--PEKMFLEKLLSA 105
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 57.5 bits (138), Expect = 1e-11
Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Query: 51 PAEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQL 110
S+ FQ+ K + V V+V ++A WC CK +AP + + +
Sbjct: 7 FENQDSSVFQLVG-KNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSD 65
Query: 111 AKV-DVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
+ +D + + P ++ G++ + V +L+ L F+
Sbjct: 66 VLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFI 116
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 54.3 bits (130), Expect = 5e-11
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 78 VIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMK 137
I F + C C + ++ + K+ + K+D+ + + A++Y + +VP +
Sbjct: 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAING 63
Query: 138 DGREQDRFVGFQKSNLEELEAFV 160
RFVG + EEL +
Sbjct: 64 VV----RFVGAP--SREELFEAI 80
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 55.1 bits (132), Expect = 7e-11
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 10/107 (9%)
Query: 63 DQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPC-LEAIVERMNGKVQLAKVDVDLM--- 118
D+ FE V++ +V F K A + + +A V V
Sbjct: 8 DELSFEKTVER-FPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGEL 66
Query: 119 --TDLAMDY--QVSSVPVLIRMKDGREQDRFVGFQ-KSNLEELEAFV 160
L Y + P + K ++ + L+ L+AFV
Sbjct: 67 ENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFV 113
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 54.5 bits (130), Expect = 1e-10
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 60 QITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNG--KVQLAKVDVDL 117
+ K + V + V+++F+A WC CK +AP E + +
Sbjct: 6 VVVA-KNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVD 64
Query: 118 MTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
T + ++ P + G + +E+L F+
Sbjct: 65 ATANDVPDEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFI 107
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 50.2 bits (119), Expect = 4e-09
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 6/120 (5%)
Query: 53 EAPSTSFQIT--DQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIV---ERMNGK 107
+AP + + F + ++V+F+A WC CK +AP + +
Sbjct: 1 DAPEEEDHVLVLRKSNFAEALAA-HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSE 59
Query: 108 VQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKPA 167
++LAKVD +DLA Y V P + ++G +++ ++ PA
Sbjct: 60 IRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 49.4 bits (117), Expect = 6e-09
Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 9/101 (8%)
Query: 67 FEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQ 126
+ PV+ F C C L+ +R + + + + Y+
Sbjct: 7 GNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEV--DITLPENSTWYERYK 64
Query: 127 VSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKPA 167
+ +F+ + N +LE + P+
Sbjct: 65 FDIPVFHL-------NGQFLMMHRVNTSKLEKQLRKLSGPS 98
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 49.3 bits (117), Expect = 9e-09
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 63 DQKEFEAKVKQASTPVIVDFFAKWC-----DPCKLMAPCLEAIVERMNGKVQLAKVDVDL 117
D F + + S V+V F ++ D K +A + + + +V ++ L
Sbjct: 10 DTVTFYKVIPK-SKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKL 68
Query: 118 MTDLAMDY--QVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTN 162
+L+ Y S PV +DG ++ + ++ ++
Sbjct: 69 NMELSEKYKLDKESYPVFYLFRDGDFENPVPYSGAVKVGAIQRWLKG 115
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 47.6 bits (112), Expect = 2e-08
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 75 STPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLI 134
S I F + C C +E + M V++ ++V AM+Y + +VP ++
Sbjct: 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIV 61
Query: 135 RMKDGREQDRFVGFQKSNLEELEAFV 160
D F+G E L +
Sbjct: 62 INGDV----EFIGAP--TKEALVEAI 81
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 45.3 bits (106), Expect = 3e-07
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 3/118 (2%)
Query: 50 PPAEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERM-NGKV 108
A S ++ F ++ V+ +FFA WC CK MAP E + +
Sbjct: 4 AVAPEDSAVVKLAT-DSFNEYIQS-HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNI 61
Query: 109 QLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKP 166
LA++D DL M++ + P L K+ + E + F+ +P
Sbjct: 62 TLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP 119
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 44.5 bits (104), Expect = 6e-07
Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 30/112 (26%)
Query: 77 PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDV--------------------- 115
P ++ F++ C CK P + ++ ++ + V +
Sbjct: 31 PTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90
Query: 116 ------DLMTDLAMDYQVSSVP-VLIRMKDGREQDRFVGFQKSNLEELEAFV 160
D L ++ VP + K G+ + G ++ LE V
Sbjct: 91 TQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGS--GMKMLEKRV 140
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 44.5 bits (104), Expect = 8e-07
Identities = 10/89 (11%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Query: 65 KEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVE--RMNGKVQLAKVDVDLMTDLA 122
++ + + + P++V WC CK + P E ++ + ++ +
Sbjct: 15 EDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDE 74
Query: 123 MDYQVSSVPVLIRM--KDGREQDRFVGFQ 149
I G+ +
Sbjct: 75 DFSPDGGYIPRILFLDPSGKVHPEIINEN 103
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein
DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli
[TaxId: 562]}
Length = 117
Score = 43.8 bits (102), Expect = 8e-07
Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 12/113 (10%)
Query: 60 QITDQKEFEAKVKQAST-PVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAK------ 112
QI E + +A PV++D +A WC CK + +
Sbjct: 6 QIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 65
Query: 113 VDVDLMTDLAMDYQVSSVPVLIRM-KDGRE--QDRFVGFQKSNLEELEAFVTN 162
+ L V +P ++ G+E Q R GF + E A + +
Sbjct: 66 ANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFM--DAETFSAHLRD 116
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 40.9 bits (95), Expect = 6e-06
Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query: 63 DQKEFEAKVKQASTPV-IVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLMTDL 121
+ + +++ +++ C C + L + +N +++ +D +
Sbjct: 2 EAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAV-LNPRIKHTAIDGGTFQNE 60
Query: 122 AMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFV 160
+ V VP + +G ++ G L E+ A V
Sbjct: 61 ITERNVMGVPAV--FVNG--KEFGQGRM--TLTEIVAKV 93
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 41.0 bits (95), Expect = 1e-05
Identities = 12/111 (10%), Positives = 33/111 (29%), Gaps = 11/111 (9%)
Query: 63 DQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPC-------LEAIVERMNGKVQLAKVDV 115
+ K ++ K+ + + + D A + V VD
Sbjct: 17 NAKNYKNVFKK-YEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDS 75
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKP 166
+ +A ++ + K+ + + G + + L F+ + +
Sbjct: 76 EKDAAVAKKLGLTEEDSIYVFKEDEVIE-YDGEF--SADTLVEFLLDVLED 123
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 40.3 bits (93), Expect = 3e-05
Identities = 14/121 (11%), Positives = 40/121 (33%), Gaps = 6/121 (4%)
Query: 45 TGNKTPPAEAPSTSFQITDQKEFEAKVKQASTPV-IVDFFAKWCDPCKLMAPCLEAIVER 103
+ A ++++ ++ WC C++ L+ +R
Sbjct: 23 ATEQGAVARFRQKLESNGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFA-QR 81
Query: 104 MNGKVQLAKVDVD----LMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAF 159
+ ++LA + + +++ VL+ ++ RFV ++ L+
Sbjct: 82 LQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRFVERPQAVLDGGPQA 141
Query: 160 V 160
+
Sbjct: 142 L 142
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 40.0 bits (92), Expect = 3e-05
Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 23/129 (17%)
Query: 62 TDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNG--------------- 106
+ ++A V PV+++ +A WC + L + +
Sbjct: 7 NPGQFYQADVLTQGKPVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDDRQKAIS 66
Query: 107 -----KVQLAKVDVDLMTDLAMDYQVSSVPVL-IRMKDGREQDRFVGFQ-KSNLEE-LEA 158
A D L +D V P + +G + R G EE ++
Sbjct: 67 WLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 126
Query: 159 FVTNAEKPA 167
K A
Sbjct: 127 LWEKYSKEA 135
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 38.3 bits (88), Expect = 1e-04
Identities = 19/141 (13%), Positives = 35/141 (24%), Gaps = 33/141 (23%)
Query: 54 APSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKV 113
++ + D + +K+ P ++ F+A WC C E +
Sbjct: 3 HTLSTLKTADNRPASVYLKK-DKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLIT 61
Query: 114 DVDLMTD-----------------------------LAMDYQVSSVPVLIRM-KDGREQD 143
+A +S P + KDG Q
Sbjct: 62 VASPGFLHEKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQR 121
Query: 144 RFVGFQKSNLEELEAFVTNAE 164
G N + A + +
Sbjct: 122 IVKGSI--NEAQALALIRDPN 140
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 37.0 bits (85), Expect = 4e-04
Identities = 17/144 (11%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 39 ATNTTPTGNK-TPPAEAPSTSFQITDQKEFEAKVKQAST---PVIVDFFAKWCDPCKLMA 94
++ ++ K T A+ + + FE + ++++ C+ +
Sbjct: 2 SSGSSGIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLN 61
Query: 95 PCL---EAIVERMNGKVQLAKVDVDLM--TDLAMDYQVSSVP--VLIRMKDGREQDRFVG 147
+ EA+ + +V D Y++ P ++ + G++ +
Sbjct: 62 RDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ 121
Query: 148 FQKSN-LEELEAFVTNAEKPAETS 170
S+ L+++ F+ + S
Sbjct: 122 LDVSSFLDQVTGFLGEHGQLDGLS 145
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 36.3 bits (83), Expect = 7e-04
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 77 PVIVDFFAKWCDPCKLMAPCLEAIVERMNGK--VQLAKVDVDLMTDLAMDY 125
V F A WC P + P L + K ++ + D + DY
Sbjct: 30 TVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80
>d1r5pa_ c.47.1.15 (A:) Circadian oscillation regulator KaiB
{Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId: 1180]}
Length = 90
Score = 28.5 bits (64), Expect = 0.17
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 102 ERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVG 147
+ G L +DV LA + ++ + P L + + +G
Sbjct: 28 QEFQGIYALKVIDVLKNPQLAEEDKILATPTLSK-ILPPPVRKIIG 72
>d1n02a_ b.89.1.1 (A:) Cyanovirin-N {Cyanobacterium (Nostoc
ellipsosporum) [TaxId: 45916]}
Length = 102
Score = 27.1 bits (60), Expect = 0.62
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 83 FAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVD 116
F++ C + L + ER NG + +D++
Sbjct: 56 FSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLN 89
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 27.3 bits (60), Expect = 1.1
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 53 EAPSTSFQITDQKEFEA-KVKQASTPVIVDFFAKWCDPCKLMAPCLE---AIVERMNGKV 108
+ T Q D K++ + A P +++FF+ +C C L + +++ V
Sbjct: 90 KGGGTGAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGV 149
Query: 109 QLAKVDVDLM 118
++ K V+ M
Sbjct: 150 KMTKYHVNFM 159
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 26.8 bits (58), Expect = 1.1
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 77 PVIVDFFAKWCDPCKLMAPCLEAIVERMNG--KVQLAKVDVDLMTDLAMDY 125
V + F A WC PC+ P L E+ + ++ + D DY
Sbjct: 30 TVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY 80
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 25.8 bits (56), Expect = 1.3
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 79 IVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDL-MTDLAMDYQVSSVPVLIRMK 137
I + C C + ++R + +D D M PV+
Sbjct: 3 ITLYTKPACVQCTAT----KKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVE--V 56
Query: 138 DGREQDRFVGFQKSNLEELEA 158
DG + + GF+ +++L+A
Sbjct: 57 DG---EHWSGFRPERIKQLQA 74
>d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr
{Rhodospirillum centenum [TaxId: 34018]}
Length = 110
Score = 25.4 bits (55), Expect = 2.7
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 92 LMAPCLEAIVERMNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQK 150
+APC + +D D D+Q++ V V IRM++ DR+ F +
Sbjct: 51 EVAPCTNIPAFSGRFMDGVTSGTLDARFDFVFDFQMAPVRVQIRMQNAGVPDRYWIFVR 109
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein
TlpA, soluble domain {Bradyrhizobium japonicum [TaxId:
375]}
Length = 176
Score = 25.8 bits (55), Expect = 2.8
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 33/143 (23%)
Query: 49 TPPAEAPSTSFQITDQKEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKV 108
+ P + P +F+ D K + ++V+ +A WC PC+ P L+ + +++G
Sbjct: 31 SAPLKLPDLAFEDADGKPKKLS-DFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPN 89
Query: 109 Q-----------------------------LAKVDVDLMTDLAMDYQVSSVP--VLIRMK 137
+ DL + +P VL+
Sbjct: 90 FEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVD-P 148
Query: 138 DGREQDRFVGFQKSNLEELEAFV 160
G E G + E+ +
Sbjct: 149 QGCEIATIAGPAEWASEDALKLI 171
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ),
soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 160
Score = 25.8 bits (55), Expect = 2.8
Identities = 9/121 (7%), Positives = 27/121 (22%), Gaps = 13/121 (10%)
Query: 59 FQITDQ-------KEFEAKVKQASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLA 111
F +T K++ + +++ F C V +
Sbjct: 3 FSLTTHTGERKTDKDYLGQW------LLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTL 56
Query: 112 KVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKPAETSE 171
L + + + + G ++ + A+ + +
Sbjct: 57 PDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDED 116
Query: 172 G 172
Sbjct: 117 E 117
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 133
Score = 25.3 bits (55), Expect = 3.8
Identities = 6/56 (10%), Positives = 24/56 (42%)
Query: 104 MNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAF 159
+ G+ + ++ D++ + MD ++ + + +++ F+ ++ F
Sbjct: 1 LCGETEEERIRADIVENQVMDNRMQLIMLCYNPDFEKQKPEFLKTIPEKMKLYSEF 56
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 25.4 bits (54), Expect = 4.1
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 73 QASTPVIVDFFAKWCDPCKLMAPCLEAIVERMNGKVQLAKVDVDLM 118
+S+PV+ +FF+ +C C P + + +++ + K V M
Sbjct: 16 ASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFM 61
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga
maritima [TaxId: 2336]}
Length = 285
Score = 25.4 bits (55), Expect = 4.3
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 116 DLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTNAEKPAETSEGVPS 175
D+ Y + S+P+ + +DGR + + + + A +TS+
Sbjct: 13 DVPFSWMEKYDIDSIPLYVVWEDGRSEPDER--EPEEIMNFYKRIREAGSVPKTSQPSVE 70
Query: 176 Q 176
Sbjct: 71 D 71
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 133
Score = 23.8 bits (51), Expect = 9.8
Identities = 10/59 (16%), Positives = 27/59 (45%)
Query: 104 MNGKVQLAKVDVDLMTDLAMDYQVSSVPVLIRMKDGREQDRFVGFQKSNLEELEAFVTN 162
M G+ ++ K VD++ + MD +++ + + + ++ L +L F+ +
Sbjct: 1 MCGETEVEKQRVDVLENHLMDLRMAFARLCYSPDFEKLKPAYLEQLPGKLRQLSRFLGS 59
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.310 0.124 0.350
Gapped
Lambda K H
0.267 0.0496 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 622,439
Number of extensions: 26359
Number of successful extensions: 119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 56
Length of query: 189
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 109
Effective length of database: 1,309,196
Effective search space: 142702364
Effective search space used: 142702364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 50 (23.6 bits)