BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17834
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6J4|YHD6_SCHPO Uncharacterized protein C1683.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC1683.06c PE=3 SV=1
Length = 310
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 139/319 (43%), Gaps = 21/319 (6%)
Query: 7 KVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKN 66
K+I+D D G DDA LL + + + IE++ +T GN +S N ++L GR +
Sbjct: 2 KIIIDTDPGQDDAITALLAIASPE---IELLGVTTVAGNVPVSMTTRNALQMLDLAGRPD 58
Query: 67 IPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALH 126
IPVY G +KPL+ + H G +GF L + H + +
Sbjct: 59 IPVYAGSNKPLL------RAPITATHVHGASGFEGAVLPPPSRKENEGHAVDF----IID 108
Query: 127 ELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFL 186
L G I++ + PLTNIAL L P+ Q AK++ +M G VGN+T AAEFN
Sbjct: 109 TLRNNEPGTITICTIGPLTNIALALNKAPEVIQRAKQIVMMAGAFSEVGNITPAAEFNIY 168
Query: 187 TDPEAAHIVLGGFHGPICILPWEACLGIDISYEW--RYDTLGASDAPYISLLNRLERGIS 244
DP AA +VL PI ++P + + S + R + L P ++ R+E+
Sbjct: 169 VDPHAAQMVLSSGI-PIVMMPLDITHQLHTSAKRIARMEALPNRVGPVVAAWLRMEKAYE 227
Query: 245 DRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD--VVHSKT 302
+ P +L I + +E E+T G + VD V
Sbjct: 228 AKKYGTDGG---PLHDPNTVMWLLRPDIYSGRKVNVQIETQSELTMGMSVVDWWQVGLLP 284
Query: 303 PNVRMIDTVDSRLLKDMLL 321
NV + TVD ++L+
Sbjct: 285 ANVTFLRTVDDDEFYEVLI 303
>sp|P83851|IUNH_LEIMA Inosine-uridine preferring nucleoside hydrolase OS=Leishmania major
GN=NSNH PE=1 SV=3
Length = 314
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 38/313 (12%)
Query: 5 PRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGR 64
PRK+ILD D GIDDA A+ L A IE++AIT GN L +V N V G
Sbjct: 2 PRKIILDCDPGIDDAVAIFL---AHGNPEIELLAITTVVGNQSLEKVTQNARLVADVAGI 58
Query: 65 KNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGD--SDTLDRSCHVENISAV 122
+PV G +KPL+ + + H G+ G G++ LD V+ I +
Sbjct: 59 VGVPVAAGCTKPLV------RGVRNASHIHGETGMGNVSYPPEFKTKLDGRHAVQLIIDL 112
Query: 123 VALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAE 182
+ HE I+++ LTNIA+ +RL P+ KE+ +MGG + GN + AE
Sbjct: 113 IMSHE-----PKTITLVPTGGLTNIAMAVRLEPRIVDRVKEVVLMGGGYH-TGNASPVAE 166
Query: 183 FNFLTDPEAAHIVLGGFHGPICILPWEACL-GIDISYEW--------RYDTLGASDAPYI 233
FN DPEAAHIV W + G+D++++ R +G A ++
Sbjct: 167 FNVFIDPEAAHIVFNE--------SWNVTMVGLDLTHQALATPAVQKRVREVGTKPAAFM 218
Query: 234 SLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQA 293
+ + ++ + + ++ + + + +EL G +T G
Sbjct: 219 LQILDFYTKVYEKE----HDTYGKVHDPCAVAYVIDPTVMTTERVPVDIELNGALTTGMT 274
Query: 294 CVDVVHSKTPNVR 306
VD + + N R
Sbjct: 275 VVDFRYPRPKNCR 287
>sp|Q9SJM7|URH1_ARATH Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2
Length = 336
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
K+I+D D GIDD+ A+L+ + + +EI+ +T GN + N + + G
Sbjct: 22 EKLIIDTDPGIDDSMAILMAFQTPE---LEILGLTTVFGNVSTQDATRNALLLCEIAGFP 78
Query: 66 NIPVYKGVSKPL---IPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAV 122
++PV +G S+PL IP+ D++H GKNG GD+ L S SA
Sbjct: 79 DVPVAEGSSEPLKGGIPR------VADFVH--GKNGLGDVSLPPP-----SRKKSEKSAA 125
Query: 123 VALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAE 182
L E E+ G +++L L PLTN+AL ++ FA K++ I+GG +GNV AAE
Sbjct: 126 EFLDEKVEEYPGEVTILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAE 185
Query: 183 FNFLTDPEAAHIVL 196
N DPEAA +V
Sbjct: 186 ANIYGDPEAADVVF 199
>sp|Q27546|IUNH_CRIFA Inosine-uridine preferring nucleoside hydrolase OS=Crithidia
fasciculata GN=IUNH PE=1 SV=3
Length = 315
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 49/309 (15%)
Query: 5 PRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGR 64
P+K+ILD D G+DDA A+LL A IE++AIT GN L++V N V G
Sbjct: 2 PKKIILDCDPGLDDAVAILL---AHGNPEIELLAITTVVGNQTLAKVTRNAQLVADIAGI 58
Query: 65 KNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDS--DTLDRSCHVENISAV 122
+P+ G KPL+ K ++ H G++G G + + +D V I +
Sbjct: 59 TGVPIAAGCDKPLVRKIMTAG------HIHGESGMGTVAYPAEFKNKVDERHAVNLIIDL 112
Query: 123 VALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAE 182
V HE I+++ LTNIA+ RL P+ KE+ +MGG + GN TS AE
Sbjct: 113 VMSHE-----PKTITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYHE-GNATSVAE 166
Query: 183 FNFLTDPEAAHIVLGGFHGPICILPWEACL-GIDISYEWRYDTLGASDAPYISLLNRLER 241
FN + DPEAAHIV W+ + G+D++++ A P I L R++
Sbjct: 167 FNIIIDPEAAHIVFNES--------WQVTMVGLDLTHQ-------ALATPPI--LQRVKE 209
Query: 242 GISDRAISM-----------GFNKWVPADSALCTC---FLDEKAITVSYETTCSVELAGE 287
++ A M N+++ A + C ++ + ++ + +EL G+
Sbjct: 210 VDTNPARFMLEIMDYYTKIYQSNRYMAAAAVHDPCAVAYVIDPSVMTTERVPVDIELTGK 269
Query: 288 ITRGQACVD 296
+T G D
Sbjct: 270 LTLGMTVAD 278
>sp|Q652Q8|URH2_ORYSJ Probable uridine nucleosidase 2 OS=Oryza sativa subsp. japonica
GN=URH2 PE=2 SV=1
Length = 337
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
KVI+D D GIDD+ A+++ +A ++++ +T GN S N + GR
Sbjct: 21 EKVIIDTDPGIDDSVAIMMAFEAPG---VKVVGLTTIFGNCTTSHATRNALILCDRAGRP 77
Query: 66 NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
+PV +G ++PL + D++H G +G G+ D T ++ VE SA L
Sbjct: 78 EVPVAEGSAEPL---KGGKPHVADFVH--GSDGLGNTSFPDPTTTNK---VEQ-SAAEFL 128
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
+ E G ISVL L PLTNIAL ++ FA K + ++GG GN T +AE N
Sbjct: 129 VDKVSESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANI 188
Query: 186 LTDPEAAHIVL 196
+DPEAA IV
Sbjct: 189 HSDPEAADIVF 199
>sp|Q6ZJ05|URH1_ORYSJ Probable uridine nucleosidase 1 OS=Oryza sativa subsp. japonica
GN=URH1 PE=2 SV=1
Length = 324
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 2 SIYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQA 61
I+ K+I+D D GIDD+ +L+ +A +EII +T GN N + +
Sbjct: 6 QIHRDKLIIDTDPGIDDSMTILMAFRAPT---VEIIGLTTIFGNTTTKNATQNALLLCER 62
Query: 62 FGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISA 121
G +PV +G ++PL K + + D++H G +G G++ L S V+ +A
Sbjct: 63 AGHPEVPVAEGSAEPL--KGGEPRVA-DFVH--GSDGLGNLFL----PAPTSKKVDENAA 113
Query: 122 VVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAA 181
+++++ +F G +S+L L PLTN+AL ++ P FA K++ ++GG GNV+ AA
Sbjct: 114 EFMVNKVS-QFPGEVSILALGPLTNVALAIKRDPSFASKVKKIVVLGGAFFAAGNVSPAA 172
Query: 182 EFNFLTDPEAAHIVL 196
E N DPEAA IV
Sbjct: 173 EANIYGDPEAADIVF 187
>sp|A6T9S2|RIHA_KLEP7 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=rihA PE=3 SV=1
Length = 311
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 34/323 (10%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+++D D G DDA AL+L L + + +E+ A+T GN + + NV R+L R +I
Sbjct: 5 IMIDCDPGHDDAIALVLALASPE---LEVKAVTASAGNQTPEKTLRNVLRMLTLLNRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL N G+ L + + +N +AV +
Sbjct: 62 PVAGGAWKPLM-RDL----------IIADNVHGESGLDGPSLPEPAFAPQNCTAVELMAS 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
+ RE + ++++ P TN+AL L P+ + IMGG G+GN AAEFN
Sbjct: 111 VLRESQESVTLVATGPQTNVALLLASHPELHAKIARIVIMGGA-MGLGNWQPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DP+AA +V F I ++ G+D+++ R L A + + N + +++
Sbjct: 170 DPQAAEMV---FQSGIPVV----MAGLDVTH--RAQILPADIERFRQIGNPVSTIVAELL 220
Query: 248 -ISMGFN---KW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVH 299
M ++ KW P +L + I + E VE G+ T+G VD H
Sbjct: 221 DFFMAYHKDEKWGFDGAPLHDPCTIAWLLKPEIFTTIERWVGVETEGKYTQGMTVVDYYH 280
Query: 300 --SKTPNVRMIDTVDSRLLKDML 320
PN ++ VD D+L
Sbjct: 281 LTGNRPNTTLMLDVDREAFVDLL 303
>sp|B1KHA5|RIHA_SHEWM Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella
woodyi (strain ATCC 51908 / MS32) GN=rihA PE=3 SV=1
Length = 312
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 34/300 (11%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
R +ILD D G DDA A++L L ++ +A+T GN + ++N R+L GR
Sbjct: 3 RPIILDCDPGHDDAIAIILALSSDA---FSPLAVTTSAGNQTPDKTLNNALRILTLLGRS 59
Query: 66 NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
+IPV G KPL ++L N G+ L D S + ++AV +
Sbjct: 60 DIPVAGGAVKPLA-REL----------IIADNVHGETGLDGPVLPDPSFAPQAMTAVELM 108
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
++ + ++++ PLTNIAL L P+ N +++ +MGG GVGN T AAEFN
Sbjct: 109 ALKIKQSQAPVTLVPTGPLTNIALLLATHPELHSNIEQIVLMGGA-AGVGNWTPAAEFNI 167
Query: 186 LTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISD 245
DPEAA +V +P C G+D++++ + + A ++ N + + ++D
Sbjct: 168 FVDPEAADMVFKAG------IPITMC-GLDVTHQAQ--VMDEDIARIRAIENPIAQCVAD 218
Query: 246 ---------RAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD 296
R GF P +L + + + + +E GE T+G VD
Sbjct: 219 LLDFFILYHRDPKWGFTG-APLHDPCTIAWLLKPELFTAQQAWVGIETKGEHTQGMTVVD 277
>sp|A4W829|RIHA_ENT38 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Enterobacter
sp. (strain 638) GN=rihA PE=3 SV=1
Length = 313
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+ILD D G DDA AL+L L + + + + A+T GN + + NV R+L R +I
Sbjct: 5 IILDCDPGHDDAIALVLALASPE---LALKAVTSSAGNQTPDKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL D +H G+ G L + ++C +AV + +
Sbjct: 62 PVAGGARKPLM-RDL---IIADNVH--GETGLDGPALPEPTFKPQAC-----TAVELMVK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
+ RE ++++ P TN+AL L P+ + + IMGG+ G+GN T AAEFN
Sbjct: 111 VLRESDEPVTLVATGPQTNVALLLNSHPELHRKIARIVIMGGS-MGLGNWTPAAEFNIFV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISD-- 245
DPEAA IV F + I+ G+D+++ R + A + ++ N + +++
Sbjct: 170 DPEAAEIV---FQSGLPIV----MAGLDVTH--RAQIMSADVERFRAIGNPVATTVAELL 220
Query: 246 -------RAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDV- 297
+A GF+ P +L + + + + VE G+ T+G VD
Sbjct: 221 DFFMEYHKAEKWGFHG-APLHDPCTIAWLLKPELFTTVDRWVGVETQGKYTQGMTVVDYY 279
Query: 298 -VHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ +D + D+L
Sbjct: 280 SLTGNKPNTTLMVDIDRQGFVDLL 303
>sp|Q8LAC4|URH2_ARATH Probable uridine nucleosidase 2 OS=Arabidopsis thaliana GN=URH2
PE=2 SV=1
Length = 322
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 12/191 (6%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
+K+I+D D GIDDA A+ + L + + +++I +T GN + N +L+ GR
Sbjct: 7 KKIIIDTDPGIDDAMAIFVALNSPE---VDVIGLTTIFGNVYTTLATRNALHLLEVAGRT 63
Query: 66 NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
+IPV +G K + D + + D++H GK+G G+ + + +E S L
Sbjct: 64 DIPVAEGTHKTFL-NDTKLRIA-DFVH--GKDGLGNQNFPPP----KGKPIEK-SGPEFL 114
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
E + G I+V+ L PLTN+AL ++L P+F++N ++ ++GG GNV A+E N
Sbjct: 115 VEQAKLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANI 174
Query: 186 LTDPEAAHIVL 196
DPEAA IV
Sbjct: 175 FGDPEAADIVF 185
>sp|B5XWV7|RIHA_KLEP3 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Klebsiella
pneumoniae (strain 342) GN=rihA PE=3 SV=1
Length = 311
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 145/323 (44%), Gaps = 34/323 (10%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+++D D G DDA A++L L + + +E+ A+T GN + + NV R+L R +I
Sbjct: 5 MMIDCDPGHDDAIAMVLALASPE---LEVKAVTASAGNQTPEKTLRNVLRMLTLLNRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL N G+ L + + +N +AV +
Sbjct: 62 PVAGGAWKPLM-RDL----------IIADNVHGESGLDGPSLPEPTFAPQNCTAVELMAR 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
+ RE + ++++ P TN+AL L P+ + IMGG G+GN AAEFN
Sbjct: 111 VLRESQEPVTLVATGPQTNVALLLASHPELHAKIARIVIMGGA-MGLGNWQPAAEFNIFV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DP+AA +V F I ++ G+D+++ + L A + + N + +++
Sbjct: 170 DPQAAEMV---FQSGIPVV----MAGLDVTH--KAQILPADIERFRQIGNPVSTIVAELL 220
Query: 248 -ISMGFN---KW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVH 299
M ++ KW P +L + I + E VE G+ T+G VD H
Sbjct: 221 DFFMAYHKDEKWGFDGAPLHDPCTIAWLLKPEIFTTIERWVGVETEGKYTQGMTVVDYYH 280
Query: 300 --SKTPNVRMIDTVDSRLLKDML 320
PN ++ VD D+L
Sbjct: 281 LTGNRPNTTLMLDVDREAFVDLL 303
>sp|Q57RR6|RIHA_SALCH Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
choleraesuis (strain SC-B67) GN=rihA PE=3 SV=1
Length = 311
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DPEAA IV F I ++ G+D++++ + + A+D + I
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQ---IHAADIERFRDIGNPISTIVAEL 219
Query: 248 ISMGF-----NKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD-- 296
+ F KW P + +L + I + E VE G+ T+G VD
Sbjct: 220 LDFFFEYHKDEKWGFVGAPLHAPCTIAWLLKPEIFTTVERWVGVETKGKYTQGMTVVDYY 279
Query: 297 VVHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ VD + D+L
Sbjct: 280 FLTGNKPNATVMVDVDRQGFVDLL 303
>sp|A8AJF8|RIHA_CITK8 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Citrobacter
koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
GN=rihA PE=3 SV=1
Length = 312
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 32/322 (9%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
V+ D D G DDA A++L L + + +++ AIT GN + + NV R+L GR +I
Sbjct: 5 VLFDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPDKTLRNVLRMLTLLGRNDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL D +H G++G L + ++C +AV + +
Sbjct: 62 PVAGGAIKPLM-RDL---IIADNVH--GESGLDGPALPEPSFAPQTC-----TAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + + IMGG G+GN T AAEFN
Sbjct: 111 TLRESPEPVTIVATGPQTNVALLLNSHPELHRKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRY-----DTLGASDAPYISLLNRLERG 242
DPEAA IV F I ++ G+D++++ + + A+ P +++ L
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAEDTERFRATGNPVSTIVAELLDF 222
Query: 243 ISD--RAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD--VV 298
+ + GF P +L + + + E VE G+ T+G VD +
Sbjct: 223 FLEYHKDEKWGFTG-APLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYFL 281
Query: 299 HSKTPNVRMIDTVDSRLLKDML 320
PN ++ +D + D+L
Sbjct: 282 TGNKPNATVMVDIDRQGFVDLL 303
>sp|B7LKV4|RIHA_ESCF3 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=rihA PE=3 SV=1
Length = 311
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-RDL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGIGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|C0PW90|RIHA_SALPC Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
paratyphi C (strain RKS4594) GN=rihA PE=3 SV=1
Length = 311
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DPEAA IV F I ++ G+D++++ + + A+D + I
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQ---IHAADIERFRDIGNPISTIVAEL 219
Query: 248 ISMGF-----NKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD-- 296
+ F KW P +L + I + E VE G+ T+G VD
Sbjct: 220 LDFFFEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETKGKYTQGMTVVDYY 279
Query: 297 VVHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ VD + D+L
Sbjct: 280 FLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7NM03|RIHA_ECO7I Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O7:K1 (strain IAI39 / ExPEC) GN=rihA PE=3 SV=1
Length = 311
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ +DL N G+ L + + +N +AV + +
Sbjct: 62 PVASGAVKPLM-RDL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5EZA2|RIHA_SALA4 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
agona (strain SL483) GN=rihA PE=3 SV=1
Length = 311
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5FNA2|RIHA_SALDC Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
dublin (strain CT_02021853) GN=rihA PE=3 SV=1
Length = 311
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLSLASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B4TPY1|RIHA_SALSV Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
schwarzengrund (strain CVM19633) GN=rihA PE=3 SV=1
Length = 311
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPDKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5R809|RIHA_SALG2 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=rihA PE=3
SV=1
Length = 311
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLNGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETKGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VDS+ D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDSQGFVDLL 303
>sp|A9MKC6|RIHA_SALAR Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
GN=rihA PE=3 SV=1
Length = 311
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 144/324 (44%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+ILD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 IILDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPDKTLRNVLRMLTLLKRSDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESPQPVTLVATGPQTNVALLLNSHPELHAKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I +L G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVL----MAGLDVTHKAQIHTADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD-- 296
D GF P +L + + + E VE G+ T+G VD
Sbjct: 223 FLEYHKDE--KWGFTG-APLHDPCTIAWLLKAELFTTVERWVGVETQGKYTQGMTVVDYY 279
Query: 297 VVHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ VD D+L
Sbjct: 280 FLTGNKPNATVMVDVDREGFVDLL 303
>sp|Q83LY1|RIHA_SHIFL Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shigella
flexneri GN=rihA PE=3 SV=4
Length = 311
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN +I VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVIVDVDRQGFVDLL 303
>sp|Q0T6R1|RIHA_SHIF8 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shigella
flexneri serotype 5b (strain 8401) GN=rihA PE=3 SV=1
Length = 311
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN +I VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVIVDVDRQGFVDLL 303
>sp|P41409|RIHA_ECOLI Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli (strain K12) GN=rihA PE=1 SV=2
Length = 311
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + S E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|C4ZWD8|RIHA_ECOBW Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli (strain K12 / MC4100 / BW2952) GN=rihA PE=3 SV=1
Length = 311
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + S E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7UKT4|RIHA_ECO27 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O127:H6 (strain E2348/69 / EPEC) GN=rihA PE=3 SV=1
Length = 311
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVASGAVKPLM-RNL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE + ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q8FJY8|RIHA_ECOL6 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rihA
PE=3 SV=2
Length = 311
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVASGAVKPLM-RNL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE + ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|A1A8R9|RIHA_ECOK1 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O1:K1 / APEC GN=rihA PE=3 SV=1
Length = 311
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVASGAVKPLM-RNL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE + ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7MFR7|RIHA_ECO45 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O45:K1 (strain S88 / ExPEC) GN=rihA PE=3 SV=1
Length = 311
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVASGAVKPLM-RNL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE + ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B1IYF7|RIHA_ECOLC Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rihA PE=3
SV=1
Length = 311
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + S E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5BCD9|RIHA_SALPK Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
paratyphi A (strain AKU_12601) GN=rihA PE=3 SV=1
Length = 311
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G++++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLNVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q5PM78|RIHA_SALPA Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=rihA PE=3
SV=1
Length = 311
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G++++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLNVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7N9Q7|RIHA_ECOLU Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rihA PE=3
SV=1
Length = 311
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNASVMVDVDRQGFVDLL 303
>sp|A7ZXS0|RIHA_ECOHS Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O9:H4 (strain HS) GN=rihA PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 144/328 (43%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE I+++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPITIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D+++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHRAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B2TU69|RIHA_SHIB3 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shigella
boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rihA
PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5YQK2|RIHA_ECO5E Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O157:H7 (strain EC4115 / EHEC) GN=rihA PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q8XBL8|RIHA_ECO57 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O157:H7 GN=rihA PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B5QVR2|RIHA_SALEP Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
enteritidis PT4 (strain P125109) GN=rihA PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLNGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETKGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q8Z8H0|RIHA_SALTI Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
typhi GN=rihA PE=3 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DPEAA IV F I ++ G+D++++ + + A+D + I
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQ---IHAADIERFRDIGNPISTIVAEL 219
Query: 248 ISMGF-----NKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD-- 296
+ F KW P +L + I + E VE G+ T+G VD
Sbjct: 220 LDFFFEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYY 279
Query: 297 VVHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ VD + D+L
Sbjct: 280 FLTGNKPNATVMVDVDRQGFVDLL 303
>sp|A9MUJ0|RIHA_SALPB Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rihA PE=3
SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 36/324 (11%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRA 247
DPEAA IV F I ++ G+D++++ + + A+D + I
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQ---IHAADIERFRDIGNPISTIVAEL 219
Query: 248 ISMGF-----NKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD-- 296
+ F KW P +L + I + E VE G+ T+G VD
Sbjct: 220 LDFFFEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYY 279
Query: 297 VVHSKTPNVRMIDTVDSRLLKDML 320
+ PN ++ VD + D+L
Sbjct: 280 FLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B6I163|RIHA_ECOSE Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli (strain SE11) GN=rihA PE=3 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7L9J7|RIHA_ECO55 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli (strain 55989 / EAEC) GN=rihA PE=3 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|A7ZJ42|RIHA_ECO24 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O139:H28 (strain E24377A / ETEC) GN=rihA PE=3 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPAFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q324P5|RIHA_SHIBS Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shigella
boydii serotype 4 (strain Sb227) GN=rihA PE=3 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ T+G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTDNKPNATVMVDVDRQGFVDLL 303
>sp|B4TB65|RIHA_SALHS Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
heidelberg (strain SL476) GN=rihA PE=3 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|A6WSI3|RIHA_SHEB8 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella
baltica (strain OS185) GN=rihA PE=3 SV=1
Length = 318
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
R +ILD D G DDA AL+L L NL+ + A+T GN + ++N R+L R
Sbjct: 3 RHIILDCDPGHDDAIALILALA--HPNLVPL-AVTTSAGNQTPDKTLNNALRILTLLNRG 59
Query: 66 NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
+IPV G +KPL ++L N G+ L + S + I+AV +
Sbjct: 60 DIPVAGGATKPLT-REL----------IIADNVHGETGLDGPALPEPSFSPQAITAVELM 108
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
+ R+ ++++ PLTNIAL L + + + +MGG GVGN T AAEFN
Sbjct: 109 AQQIRQSTQPVTLVPTGPLTNIALLLASHSELHPKIERIVLMGGA-AGVGNWTPAAEFNI 167
Query: 186 LTDPEAAHIVLGGFHGPICILPWEACLGIDISYE 219
DPEAA IV +P C G+D++++
Sbjct: 168 FVDPEAADIVFKSG------IPITMC-GLDVTHQ 194
>sp|Q3Z4E1|RIHA_SHISS Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shigella
sonnei (strain Ss046) GN=rihA PE=3 SV=1
Length = 311
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ ++G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYSQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7M5H8|RIHA_ECO8A Pyrimidine-specific ribonucleoside hydrolase RihA OS=Escherichia
coli O8 (strain IAI1) GN=rihA PE=3 SV=1
Length = 311
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
++LD D G DDA A++L L + + +++ AIT GN + + NV R+L R +I
Sbjct: 5 ILLDCDPGHDDAIAIVLALASPE---LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + + +N +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG G+GN T AAEFN
Sbjct: 111 TLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + + + E VE G+ ++G
Sbjct: 223 FLEYHKDE-------KWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYSQGMTV 275
Query: 295 VDVVH--SKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYYLTGNKPNATVMVDVDRQGFVDLL 303
>sp|Q8ZQY4|RIHA_SALTY Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=rihA PE=3 SV=1
Length = 311
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 44/328 (13%)
Query: 8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
+I+D D G DDA AL+L L + + +E+ AIT GN + + NV R+L R +I
Sbjct: 5 IIIDCDPGHDDAIALVLALASPE---LEVKAITSSAGNQTPEKTLRNVLRMLTLLKRLDI 61
Query: 68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
PV G KPL+ ++L N G+ L + S ++ +AV + +
Sbjct: 62 PVAGGAVKPLM-REL----------IIADNVHGESGLDGPALPEPSFAPQSGTAVELMAK 110
Query: 128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
RE ++++ P TN+AL L P+ + IMGG +GN T AAEFN
Sbjct: 111 TLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGA-MALGNWTPAAEFNIYV 169
Query: 188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEW--------RYDTLGASDAPYIS-LLNR 238
DPEAA IV F I ++ G+D++++ R+ +G + ++ LL+
Sbjct: 170 DPEAAEIV---FQSGIPVV----MAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDF 222
Query: 239 LERGISDRAISMGFNKW----VPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQAC 294
D KW P +L + I + E VE G+ T+G
Sbjct: 223 FMEYHKDE-------KWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTV 275
Query: 295 VD--VVHSKTPNVRMIDTVDSRLLKDML 320
VD + PN ++ VD + D+L
Sbjct: 276 VDYYFLTGNKPNATVMVDVDRQGFVDLL 303
>sp|B7LVC3|RIHB_ESCF3 Pyrimidine-specific ribonucleoside hydrolase RihB OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=rihB PE=3 SV=1
Length = 313
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 16/191 (8%)
Query: 6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
RK+ILD D G DDA A+++ A + I+++ IT GN L + + N V Q
Sbjct: 4 RKIILDCDPGHDDAIAIMM---AAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EI 59
Query: 66 NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
N+PVY G+ +P+ + + D +H G+ G +D + L R EN AV +
Sbjct: 60 NVPVYAGMPQPI----MRQQIVADNIH--GETG---LDGPVFEPLTR--QAENTHAVKYI 108
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
+ G I+++ + PL+NIA+ +R+ P +E+ +MGG + G GN T +AEFN
Sbjct: 109 IDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNI 167
Query: 186 LTDPEAAHIVL 196
DPEAA +V
Sbjct: 168 FADPEAARVVF 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,761,114
Number of Sequences: 539616
Number of extensions: 5131940
Number of successful extensions: 10891
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10408
Number of HSP's gapped (non-prelim): 143
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)